Pregenerated sensors for DET1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030610Ensembl transcript IDs: ENSMUST00000032839.13, ENSMUST00000107431.3, ENSMUST00000138062.3
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTAATCAATGGGCCTCGCTGCTGCAAGGAGCAGAGGGACAGGGATaGGCAGGTCCTCTCAGACATAGGTGTGCTGGCAACAGAGACTGT | + |
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Preference number: 1 (lower is better) Translates to: FNQWASLLQGAEGQG*AGPLRHRCAGNRDC Trigger: ACAGTCTCTGTTGCCAGCACACCTATGTCTGAGAGGACCTGCGCATCCCTGTCCCTCTGCTCCTTGCAGCAGCGAGGCCCATTGATTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR CCA 90 bp | CCCATCCTTTCTCTCAGGCTCTGTGGTAGGGGAGGCACAGCAGTCTaGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTG | + |
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Preference number: 1 (lower is better) Translates to: PILSLRLCGRGGTAV*NTDESWQLRAFALL Trigger: CAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGAGCCTGAGAGAAAGGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| 3UTR TCA 90 bp | GTTGTCATTCAGTGGCCAGGAGTTGAAACTGGAAAGGGGTCAAGTTaGGTTCAGTTACCAGAGCTGAGAGAAATCTCTGAGGGGCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: VVIQWPGVETGKGSS*VQLPELREISEGLK Trigger: CTTCAGCCCCTCAGAGATTTCTCTCAGCTCTGGTAACTGAACTCAACTTGACCCCTTTCCAGTTTCAACTCCTGGCCACTGAATGACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR TCA 90 bp | ATGGATTTAATGCTAGGTGTTCCCACAGGGAAAAGCGAGAGGACATaGAAACTGATCATCCGGGTAAGAGGAAAACAGAGTCCCACCAGG | + |
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Preference number: 1 (lower is better) Translates to: MDLMLGVPTGKSERT*KLIIRVRGKQSPTR Trigger: CCTGGTGGGACTCTGTTTTCCTCTTACCCGGATGATCAGTTTTCATGTCCTCTCGCTTTTCCCTGTGGGAACACCTAGCATTAAATCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| 3UTR GCA 90 bp | TCTCCAAAGAGTCCTGAGATTCTTTGGACACTTACTGAGCAGAGATaGCAGAATTTACTAAGAGCCACCTTAAATCCTGCAGGCGCAATA | + |
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Preference number: 1 (lower is better) Translates to: SPKSPEILWTLTEQR*QNLLRATLNPAGAI Trigger: TATTGCGCCTGCAGGATTTAAGGTGGCTCTTAGTAAATTCTGGCATCTCTGCTCAGTAAGTGTCCAAAGAATCTCAGGACTCTTTGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR CCA 90 bp | CTGAGTTTCAAAGAAGTTGTTTCTCCAAAGAGTCCTGAGATTCTTTaGACACTTACTGAGCAGAGATGCCAGAATTTACTAAGAGCCACC | + |
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Preference number: 1 (lower is better) Translates to: LSFKEVVSPKSPEIL*TLTEQRCQNLLRAT Trigger: GGTGGCTCTTAGTAAATTCTGGCATCTCTGCTCAGTAAGTGTCCAAAGAATCTCAGGACTCTTTGGAGAAACAACTTCTTTGAAACTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR GCA 90 bp | AATGCGAAGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATaGTTCTATCTCCACAGACATAAAATGCTAAGTAAACAAAATAAA | + |
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Preference number: 1 (lower is better) Translates to: NAKSDIKAERRERCK*FYLHRHKMLSKQNK Trigger: TTTATTTTGTTTACTTAGCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCTTCGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| 3UTR TCA 90 bp | AGGCTCAATTGCTTTCAAGGCACGCATTTTGGGGAACTATTATGCTaGTTAGCAATAATTATAATCTACTCCTTAAGAAATGTCCCGACG | + |
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Preference number: 1 (lower is better) Translates to: RLNCFQGTHFGELLC*LAIIIIYSLRNVPT Trigger: CGTCGGGACATTTCTTAAGGAGTAGATTATAATTATTGCTAATCAGCATAATAGTTCCCCAAAATGCGTGCCTTGAAAGCAATTGAGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGAGGGACAGGGATGCGCAGGTCCTCTCAGACATAGGTGTGCTGGCAACACCTCTCTGCCGAGAGTaGGGCTCAGGAGGCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: EQRDRDAQVLSDIGVLATPLCRE*GSGGSG Trigger: CCCTGAGCCTCCTGAGCCTCACTCTCGGCAGAGAGG...TGTTGCCAGCACACCTATGTCTGAGAGGACCTGCGCATCCCTGTCCCTCTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR-3UTR CCA 90 bp | AATGGGCCTCGCTGCTGCAAGGAGCAGAGGGACAGGGATGCGCAGGTCCTCTCATGGGAGCTGGCGTCATaGAAACCAGGACCAGATCCA | + |
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Preference number: 2 (lower is better) Translates to: NGPRCCKEQRDRDAQVLSWELAS*KPGPDP Trigger: TGGATCTGGTCCTGGTTTCCATGACGCCAGCTCCCA...TGAGAGGACCTGCGCATCCCTGTCCCTCTGCTCCTTGCAGCAGCGAGGCCCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR-3UTR GCA 90 bp | CAAGGAGCAGAGGGACAGGGATGCGCAGGTCCTCTCAGACATAGGTGTGCTGGCAAACTCAAGGAAGGCTaGAGGGAAGCCGAGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: QGAEGQGCAGPLRHRCAGKLKEG*REAEGT Trigger: TGTTCCCTCGGCTTCCCTGCAGCCTTCCTTGAGTTT...GCCAGCACACCTATGTCTGAGAGGACCTGCGCATCCCTGTCCCTCTGCTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR CAA 90 bp | GTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATaGCCCACTGAGCGAAGCAGGGGCAAAGTCCTGGACAGCACGATT | + |
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Preference number: 2 (lower is better) Translates to: VWNTDESWQLRAFAL*PTERSRGKVLDSTI Trigger: AATCGTGCTGTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGTGTGTTACCCTGCTAGTAGGTGATAGAGCCAAAGCTGGTACTAGGCAGTCACTTAGGCTTGTCTaGAGGGGCTACAAACGAAAC | + |
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Preference number: 2 (lower is better) Translates to: AQCVTLLVGDRAKAGTRQSLRLV*RGYKRN Trigger: GTTTCGTTTGTAGCCCCTGCAGACAAGCCTAAGTGA...CTGCCTAGTACCAGCTTTGGCTCTATCACCTACTAGCAGGGTAACACACTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR-3UTR GCA 90 bp | CACTTGAGATGCTACCAGTTGTCATTCAGTGGCCAGGAGTTGAAACTGGAAAGGCCTCCAGTCCCAGAATaGATCTCTCAGTTTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: HLRCYQLSFSGQELKLERPPVPE*ISQFPS Trigger: TGAAGGAAACTGAGAGATGCATTCTGGGACTGGAGG...CCTTTCCAGTTTCAACTCCTGGCCACTGAATGACAACTGGTAGCATCTCAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTCAGGAGGCTCAGGGAAGATTTAGAGCTGAAAGACATTCCCTGAAGTCCAACAATATGCACAATTaGGAGCCTAATAGCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: EAQEAQGRFRAERHSLKSNNMHN*EPNSSK Trigger: CTTGCTGCTATTAGGCTCTCAATTGTGCATATTGTT...GGACTTCAGGGAATGTCTTTCAGCTCTAAATCTTCCCTGAGCCTCCTGAGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGTTACCCTGCTAGTAGGTGATAGAGCCAAAGCTGGTACTAGGCAGTCATGCACTCAACGGGCCAAGTaGTTCAACTCCAATTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: CVTLLVGDRAKAGTRQSCTQRAK*FNSNFS Trigger: ACTAAAATTGGAGTTGAAGCACTTGGCCCGTTGAGT...GCATGACTGCCTAGTACCAGCTTTGGCTCTATCACCTACTAGCAGGGTAACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGTCATTCAGTGGCCAGGAGTTGAAACTGGAAAGGGGTCAAGTTGAGTTCTTTTGTAGACCAGGCTaGCCTCGAACTCAGAAATTC | + |
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Preference number: 2 (lower is better) Translates to: QLSFSGQELKLERGQVEFFCRPG*PRTQKF Trigger: GAATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAA...GAACTCAACTTGACCCCTTTCCAGTTTCAACTCCTGGCCACTGAATGACAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR-3UTR GCA 90 bp | TTCTCGTATAAAGCCAGCCCTGCCTGTTGTGGGAATGGAAAGGAGTACATAGTTCGGGAAAGGTGTAAATaGTTCTATCTCCACAGACAT | + |
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Preference number: 2 (lower is better) Translates to: FSYKASPACCGNGKEYIVRERCK*FYLHRH Trigger: ATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCG...AACTATGTACTCCTTTCCATTCCCACAACAGGCAGGGCTGGCTTTATACGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| 3UTR GCA 72 bp | TGGGCCTCGCTGCTGCAAGGAGCAGAGGGACAGGGATaGGCAGGTCCTCTCAGACATAGGTGTGCTGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: WASLLQGAEGQG*AGPLRHRCAGN Trigger: GTTGCCAGCACACCTATGTCTGAGAGGACCTGCGCATCCCTGTCCCTCTGCTCCTTGCAGCAGCGAGGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR GCA 72 bp | CCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTaGCCACTGAGCGAAGCAGGGGCAAAGTCCTGGACA | + |
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Preference number: 3 (lower is better) Translates to: PTKAGSSELLLY*PLSEAGAKSWT Trigger: TGTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| 3UTR CCA 72 bp | TCTCTCAGGCTCTGTGGTAGGGGAGGCACAGCAGTCTaGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: SLRLCGRGGTAV*NTDESWQLRAF Trigger: AAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGAGCCTGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| 3UTR-3UTR CAA 90 bp | CTGCAAGGAGCAGAGGGACAGGGATGCGCAGGTCCTCTCAGACATAGGTGTGCTTGGAAAGGGGTCAAGTaGAGTTCAGTTACCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: LQGAEGQGCAGPLRHRCAWKGVK*SSVTRA Trigger: AGCTCTGGTAACTGAACTCAACTTGACCCCTTTCCA...AGCACACCTATGTCTGAGAGGACCTGCGCATCCCTGTCCCTCTGCTCCTTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR TCA 72 bp | AAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCCACTaGGCGAAGCAGGGGCAAAGTCCTGGACAGCACGAT | + |
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Preference number: 3 (lower is better) Translates to: KLAAQSFCFIAH*AKQGQSPGQHD Trigger: ATCGTGCTGTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| 3UTR TCA 72 bp | GAAGCCGAGGGAACACCAGAAACTATCACAGAGTCCTaGGAACAGGAACCCTGGGAGCTGGCGTCATGGAAA | + |
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Preference number: 3 (lower is better) Translates to: EAEGTPETITES*EQEPWELASWK Trigger: TTTCCATGACGCCAGCTCCCAGGGTTCCTGTTCTCAGGACTCTGTGATAGTTTCTGGTGTTCCCTCGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR-3UTR CAA 90 bp | AATGGGCCTCGCTGCTGCAAGGAGCAGAGGGACAGGGATGCGCAGGTCCTCTCAAAGCATAATCAAATGTaGTCTGATGCAGAAAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: NGPRCCKEQRDRDAQVLSKHNQM*SDAESL Trigger: AAGGCTTTCTGCATCAGACAACATTTGATTATGCTT...TGAGAGGACCTGCGCATCCCTGTCCCTCTGCTCCTTGCAGCAGCGAGGCCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR TCA 72 bp | CATAGGTGTGCTGGCAACAGAGACTGTGACACCACTTaGGATGCTACCAGTTGTCATTCAGTGGCCAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: HRCAGNRDCDTT*DATSCHSVARS Trigger: ACTCCTGGCCACTGAATGACAACTGGTAGCATCTCAAGTGGTGTCACAGTCTCTGTTGCCAGCACACCTATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR TCA 72 bp | GAAACAGGCAGTGCTAAATTAAATGGCAGCATTCTCTaGGGTCCACAGCAGCTTCGAGCCAAGGCCAACATG | + |
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Preference number: 3 (lower is better) Translates to: ETGSAKLNGSIL*GPQQLRAKANM Trigger: CATGTTGGCCTTGGCTCGAAGCTGCTGTGGACCTCAGAGAATGCTGCCATTTAATTTAGCACTGCCTGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR TCA 72 bp | CAGTGGCCAGGAGTTGAAACTGGAAAGGGGTCAAGTTaGGTTCAGTTACCAGAGCTGAGAGAAATCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: QWPGVETGKGSS*VQLPELREISE Trigger: CTCAGAGATTTCTCTCAGCTCTGGTAACTGAACTCAACTTGACCCCTTTCCAGTTTCAACTCCTGGCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR TCA 72 bp | ATGCTAGGTGTTCCCACAGGGAAAAGCGAGAGGACATaGAAACTGATCATCCGGGTAAGAGGAAAACAGAGT | + |
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Preference number: 3 (lower is better) Translates to: MLGVPTGKSERT*KLIIRVRGKQS Trigger: ACTCTGTTTTCCTCTTACCCGGATGATCAGTTTTCATGTCCTCTCGCTTTTCCCTGTGGGAACACCTAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| 3UTR TCA 72 bp | AAGTTGAGTTCAGTTACCAGAGCTGAGAGAAATCTCTaGGGGGCTGAAGAAACAAGAAACTTCCCCTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: KLSSVTRAERNL*GAEETRNFPSG Trigger: GCCTGAGGGGAAGTTTCTTGTTTCTTCAGCCCCTCAGAGATTTCTCTCAGCTCTGGTAACTGAACTCAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR TCA 72 bp | AAATCCTGCAGGCGCAATATAAACAATATGCACAATTaGGAGCCTAATAGCAGCAAGTACTCAACGGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: KSCRRNINNMHN*EPNSSKYSTGQ Trigger: TTGGCCCGTTGAGTACTTGCTGCTATTAGGCTCTCAATTGTGCATATTGTTTATATTGCGCCTGCAGGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| 3UTR GCA 72 bp | AGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATaGTTCTATCTCCACAGACATAAAATGCTAAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: SDIKAERRERCK*FYLHRHKMLSK Trigger: TTTACTTAGCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| 3UTR GCA 72 bp | AGTCCTGAGATTCTTTGGACACTTACTGAGCAGAGATaGCAGAATTTACTAAGAGCCACCTTAAATCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SPEILWTLTEQR*QNLLRATLNPA Trigger: TGCAGGATTTAAGGTGGCTCTTAGTAAATTCTGGCATCTCTGCTCAGTAAGTGTCCAAAGAATCTCAGGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| CDS-3UTR CCA 90 bp | TCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGCACTGATGGGGAGCTaGCCTAGCAGTCGGCGCACA | + |
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Preference number: 4 (lower is better) Translates to: SVVGEAQQSGIPTKAGSSALMGS*PSSRRT Trigger: TGTGCGCCGACTGCTAGGCCAGCTCCCCATCAGTGC...TGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS-3UTR TCA 90 bp | GTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCCACTGGTGCCCGCCTTGCCTaGACTGATGCGCCGGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: VWNTDESWQLRAFALLPTGARLA*TDAPAF Trigger: GAACGCCGGCGCATCAGTTCAGGCAAGGCGGGCACC...AGTGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS-3UTR TCA 90 bp | AGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTGTCGCACTGTGTGGTTaGTGGGGCGGCCCAGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: RHSSLEYRRKLAAQSFCFVALCG*WGGPAS Trigger: GCTTGCTGGGCCGCCCCATCAACCACACAGTGCGAC...AAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS-3UTR GCA 90 bp | CTCAGAGCTTTTGCTTTATTGCCCACTGAGCGAAGCAGGGGCAAAGTCCTGGACCACTCCCGGTTCAAGTaGTCGCCATTGGCCGCCACG | + |
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Preference number: 4 (lower is better) Translates to: LRAFALLPTERSRGKVLDHSRFK*SPLAAT Trigger: CGTGGCGGCCAATGGCGAGCACTTGAACCGGGAGTG...GTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS-3UTR GCA 90 bp | AGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATGGCACTGCCATCCTaGTCTGCCCGGCGCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: RHSSLEYRRKLAAQSFCFMALPS*SARRQR Trigger: CCTCTGGCGCCGGGCAGAGCAGGATGGCAGTGCCAT...AAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS-3UTR CCA 90 bp | CTCAGAGCTTTTGCTTTATTGCCCACTGAGCGAAGCAGGGGCAAAGTCCTGGACAGGGTGAGGCTCGTCTaGGAGGTAGGCAGCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LRAFALLPTERSRGKVLDRVRLV*EVGSRA Trigger: GGCTCTGCTGCCTACCTCCCAGACGAGCCTCACCCT...GTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS-3UTR CCA 90 bp | AGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTAGGCGTCGCACTGTGTaGTTGATGGGGCGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RHSSLEYRRKLAAQSFCFRRRTV*LMGRPS Trigger: GCTGGGCCGCCCCATCAACCACACAGTGCGACGCCT...AAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS-3UTR TCA 90 bp | ACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCGCCTTGCCTGAACTaGTGCGCCGGCGTTCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: TAVWNTDESWQLRAFALLPPCLN*CAGVRG Trigger: GCCTCGAACGCCGGCGCATCAGTTCAGGCAAGGCGG...CAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS-3UTR TCA 90 bp | CAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCCATGGAACACTCGGACCTaGTGCCAGTGGGTGCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: QSGIPTKAGSSELLLYCPWNTRT*CQWVPA Trigger: GGCGGGCACCCACTGGCATCAGGTCCGAGTGTTCCA...TGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS-3UTR GCA 90 bp | TCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCACGCACAGCCTCCGTGTaGCCTCCATACTTGGCATTT | + |
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Preference number: 4 (lower is better) Translates to: SVVGEAQQSGIPTKAGSSRTASV*PPYLAF Trigger: AAATGCCAAGTATGGAGGGCACACGGAGGCTGTGCG...TGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS-3UTR CCA 90 bp | CTCTCAGGCTCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGAAAGCTCCCAGCAAGCCCGCCTaGATCTCAAACTTCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LSGSVVGEAQQSGIPTKAPSKPA*ISNFSK Trigger: CTTGCTGAAGTTTGAGATCCAGGCGGGCTTGCTGGG...AGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGAGCCTGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS-3UTR CCA 90 bp | AGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAAGGCGTCGCACTGTGTaGTTGATGGGGCGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RATSRRKGGKGVNASISTRRRTV*LMGRPS Trigger: GCTGGGCCGCCCCATCAACCACACAGTGCGACGCCT...TGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS-3UTR TCA 90 bp | TCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCACACAAACGGCCAGTGTaGAGGTCAATGATGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SVVGEAQQSGIPTKAGSSHKRPV*RSMMWR Trigger: CCTCCACATCATTGACCTTCACACTGGCCGTTTGTG...TGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS-3UTR GCA 90 bp | TCAGAGCTTTTGCTTTATTGCCCACTGAGCGAAGCAGGGGCAAAGTCCTGGACAACTGCCATCCTGCTCTaGCCGGCGCCAGAGGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SELLLYCPLSEAGAKSWTTAILL*PAPEVN Trigger: GTTTACCTCTGGCGCCGGGCAGAGCAGGATGGCAGT...TGTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR GCA 90 bp | AAGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACTCTTCGCCATGGCACTaGCATCCTGCTCTGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSDIKAERRERCKCFYLHSSPWH*HPALPG Trigger: GCCGGGCAGAGCAGGATGGCAGTGCCATGGCGAAGA...GTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR GCA 90 bp | CTCTCAGGCTCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGAAAGCTAATTGGACTTCACTGTaGAGGGTGGCGTTGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSVVGEAQQSGIPTKANWTSL*RVALRK Trigger: CTTCCGCAACGCCACCCTGCACAGTGAAGTCCAATT...AGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGAGCCTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCGCACTGATGGGGAGCTaGCCTAGCAGTCGGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QQSGIPTKAGSSELLLYCALMGS*PSSRRT Trigger: TGTGCGCCGACTGCTAGGCCAGCTCCCCATCAGTGC...GCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| 3UTR CAA 72 bp | ACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATaGCCCACTGAGCGAAGCAGGGGCAAAGTCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TDESWQLRAFAL*PTERSRGKVLD Trigger: GTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTCTCTCAGGCTCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGTCACCTGGAAGACATaGATCGTCTGCTGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ILSLRLCGRGGTAVWNTDVTWKT*IVCCCT Trigger: TGTGCAGCAGCAGACGATTCATGTCTTCCAGGTGAC...GTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGAGCCTGAGAGAAAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCGAGGGAACACCAGAAACTATCACAGAGTCCTGAGAACAGGAACCCTGGGGTCGCTCCATGACTaGCACCCACTTGTCATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSRGNTRNYHRVLRTGTLGSLHD*HPLVIV Trigger: TACGATGACAAGTGGGTGTCAGTCATGGAGCGACCC...CAGGGTTCCTGTTCTCAGGACTCTGTGATAGTTTCTGGTGTTCCCTCGGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
||
| CDS-3UTR TCA 90 bp | AGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCGTCGCACTGTGTGGTTaGTGGGGCGGCCCAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRKGGKGVNASISTDIKCVALCG*WGGPAS Trigger: GCTTGCTGGGCCGCCCCATCAACCACACAGTGCGAC...GCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | AGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACACAAAGGGGTGAAAGGTaGAGGCCACGAGGCGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RATSRRKGGKGVNASISTQRGER*RPRGVA Trigger: TGCGACGCCTCGTGGCCTTCACCTTTCACCCCTTTG...TGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGCTTTTGCTTTATTGCCCACTGAGCGAAGCAGGGGCAAAGTCCTGGACGCTGCTTTCCACCACTaGGCCCTACGAACTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRAFALLPTERSRGKVLDAAFHH*ALRTSS Trigger: ACTGGAAGTTCGTAGGGCTCAGTGGTGGAAAGCAGC...GTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107431.3 |
||
| CDS-3UTR GCA 90 bp | AGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGTCTGGCTGTCCCGCTaGACCTCAGGGAAAACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RATSRRKGGKGVNASISTVWLSR*TSGKTA Trigger: TGCCGTTTTCCCTGAGGTGCAGCGGGACAGCCAGAC...TGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CCA 90 bp | AGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTCTTCACTGTGCAGGGTaGCGTTGCGGAAGAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHSSLEYRRKLAAQSFCFLHCAG*RCGRGH Trigger: GTGACCTCTTCCGCAACGCCACCCTGCACAGTGAAG...AAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGCTTTTGCTTTATTGCCCACTGAGCGAAGCAGGGGCAAAGTCCTGGACCCCAGCAAGCCCGCCTaGATCTCAAACTTCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRAFALLPTERSRGKVLDPSKPA*ISNFSK Trigger: CTTGCTGAAGTTTGAGATCCAGGCGGGCTTGCTGGG...GTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCAGCGGCAGTCATCTGTaGAGAGGCTACACTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLEYRRKLAAQSFCFIASGSHL*RGYTPG Trigger: ACCGGGAGTGTAGCCTCTTCACAGATGACTGCCGCT...GGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR TCA 90 bp | AGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCCAGCAGAGCCCACGATaGCGCAGCGGCAGTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRKGGKGVNASISTDIKCQQSPR*RSGSHL Trigger: CAGATGACTGCCGCTGCGTCATCGTGGGCTCTGCTG...GCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCTGTAAGACTGGGCACTaGTGGGGAGCTGGCCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLEYRRKLAAQSFCFIACKTGH*WGAGLA Trigger: TGCTAGGCCAGCTCCCCATCAGTGCCCAGTCTTACA...GGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCTGTAAGACTGGGCACTaGTGGGGAGCTGGCCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQSGIPTKAGSSELLLYCCKTGH*WGAGLA Trigger: TGCTAGGCCAGCTCCCCATCAGTGCCCAGTCTTACA...GCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCTGCAAGAGGTCCTCTaGTGCCTGACAGCCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QQSGIPTKAGSSELLLYCLQEVL*CLTALV Trigger: TACCAGGGCTGTCAGGCAGCAGAGGACCTCTTGCAG...GCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR GCA 90 bp | AGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACATCCCCTTCGTATCCCTaGAAGAGGTCCTCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RATSRRKGGKGVNASISTSPSYP*KRSSAA Trigger: GGCAGCAGAGGACCTCTTGCAGGGATACGAAGGGGA...TGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGGCTCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGAAAGCTTCTGGTCATTGCCATTaGACAAGATCTCCCCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LSGSVVGEAQQSGIPTKASGHCH*TRSPLR Trigger: ACGAAGGGGAGATCTTGTCCAATGGCAATGACCAGA...AGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGAGCCTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CCA 90 bp | GACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATGTGGGGACCGTGGATTaGGGGTCACCGACTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DIKAERRERCKCFYLHRHVGTVD*GSPTHC Trigger: ACAGTGAGTCGGTGACCCCCAATCCACGGTCCCCAC...ATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CCA 90 bp | AGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCCACCTTCACTGTGCAGGGTaGCGTTGCGGAAGAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLEYRRKLAAQSFCFIAHLHCAG*RCGRGH Trigger: GTGACCTCTTCCGCAACGCCACCCTGCACAGTGAAG...GTGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGGCTCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGAAAGCTAGACAAATCCAGGTATaGGCTCCCACTGTAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSVVGEAQQSGIPTKARQIQV*APTVRL Trigger: CAGTCTTACAGTGGGAGCCCATACCTGGATTTGTCT...AGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGAGCCTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | TTCTCGTATAAAGCCAGCCCTGCCTGTTGTGGGAATGGAAAGGAGTACATAGTTACAAAGAAGGAGGCCTaGGACGGGTCTGTGACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FSYKASPACCGNGKEYIVTKKEA*DGSVTR Trigger: GCGGGTCACAGACCCGTCTCAGGCCTCCTTCTTTGT...AACTATGTACTCCTTTCCATTCCCACAACAGGCAGGGCTGGCTTTATACGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR TCA 90 bp | GTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCCACTGGGTCGCTCCATGACTaGCACCCACTTGTCATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VWNTDESWQLRAFALLPTGSLHD*HPLVIV Trigger: TACGATGACAAGTGGGTGTCAGTCATGGAGCGACCC...AGTGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | AGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTTCTTGGGTCGCTCCATaGCTGACACCCACTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RHSSLEYRRKLAAQSFCFSWVAP*LTPTCH Trigger: ATGACAAGTGGGTGTCAGTCATGGAGCGACCCAAGA...AAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | GACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATCCCGGGCATAGAACCTaGTCGGGTGATCTCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: DIKAERRERCKCFYLHRHPGHRT*SGDLHK Trigger: CTTGTGGAGATCACCCGATCAGGTTCTATGCCCGGG...ATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | TATAAAGCCAGCCCTGCCTGTTGTGGGAATGGAAAGGAGTACATAGTTTCCAGACAAAGGGGTGAAAGGTaGAGGCCACGAGGCGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: YKASPACCGNGKEYIVSRQRGER*RPRGVA Trigger: TGCGACGCCTCGTGGCCTTCACCTTTCACCCCTTTG...TCTGGAAACTATGTACTCCTTTCCATTCCCACAACAGGCAGGGCTGGCTTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCGAGGGAACACCAGAAACTATCACAGAGTCCTGAGAACAGGAACCCTGGACAAGAAGACCTCCTaGGTTCAGGAATCAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRGNTRNYHRVLRTGTLDKKTS*VQESRP Trigger: TGGCCTTGATTCCTGAACTCAGGAGGTCTTCTTGTC...CAGGGTTCCTGTTCTCAGGACTCTGTGATAGTTTCTGGTGTTCCCTCGGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCAAGAGGTCCTCTGCTaGCTGACAGCCCTGGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: TAVWNTDESWQLRAFALLQEVLC*LTALVL Trigger: GAGTACCAGGGCTGTCAGGCAGCAGAGGACCTCTTG...CAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGCTTTTGCTTTATTGCCCACTGAGCGAAGCAGGGGCAAAGTCCTGGACATACACCTCATAGAATaGAGGGTGAGGCTCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRAFALLPTERSRGKVLDIHLIE*RVRLVW Trigger: CCAGACGAGCCTCACCCTCCATTCTATGAGGTGTAT...GTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CCA 90 bp | TATAAAGCCAGCCCTGCCTGTTGTGGGAATGGAAAGGAGTACATAGTTTCCAGAACCGCCTCTTCGCCATaGCACTGCCATCCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YKASPACCGNGKEYIVSRTASSP*HCHPAL Trigger: CAGAGCAGGATGGCAGTGCCATGGCGAAGAGGCGGT...TCTGGAAACTATGTACTCCTTTCCATTCCCACAACAGGCAGGGCTGGCTTTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCTCTTGGGTCGCTCCATaGCTGACACCCACTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLEYRRKLAAQSFCFIASWVAP*LTPTCH Trigger: ATGACAAGTGGGTGTCAGTCATGGAGCGACCCAAGA...GGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | TACCAAGGCTTTATTTTCTCGTATAAAGCCAGCCCTGCCTGTTGTGGGAATGGACCCGGGCATAGAACCTaGTCGGGTGATCTCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: YQGFIFSYKASPACCGNGPGHRT*SGDLHK Trigger: CTTGTGGAGATCACCCGATCAGGTTCTATGCCCGGG...TCCATTCCCACAACAGGCAGGGCTGGCTTTATACGAGAAAATAAAGCCTTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCAGGCTCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGAAAGCTTTTTGTTTTCGGTGCTaGATAAGCTGCTTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LSGSVVGEAQQSGIPTKAFCFRC*ISCFPP Trigger: TGGTGGAAAGCAGCTTATTCAGCACCGAAAACAAAA...AGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGAGCCTGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107431.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTTTTGCTTTATTGCCCACTGAGCGAAGCAGGGGCAAAGTCCTGGACAGCGCTGGATCTGCCTTaGAAAGTTGTTGCTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SELLLYCPLSEAGAKSWTALDLP*KVVARS Trigger: GCTTCTAGCAACAACTTTGCAAGGCAGATCCAGCGC...TGTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR GCA 90 bp | ATCCTTTCTCTCAGGCTCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGTTGACAACATACTCTaGGTTAGTCCTCTGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILSLRLCGRGGTAVWNTDVDNIL*VSPLHR Trigger: TCTGTGCAGAGGACTAACGCAGAGTATGTTGTCAAC...GTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGAGCCTGAGAGAAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | TCAGAGCTTTTGCTTTATTGCCCACTGAGCGAAGCAGGGGCAAAGTCCTGGACAATGCTGACCGACCTCTaGTCATTGCCATTGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SELLLYCPLSEAGAKSWTMLTDL*SLPLDK Trigger: CTTGTCCAATGGCAATGACCAGAGGTCGGTCAGCAT...TGTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CCA 90 bp | GACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATCGCAGCTGGCGCAGCTaGTCAAAGTACTGGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DIKAERRERCKCFYLHRHRSWRS*SKYWKN Trigger: GTTCTTCCAGTACTTTGACCAGCTGCGCCAGCTGCG...ATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CCA 90 bp | CAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCCAGCTGAGCAAGGGAATTaGACTTCACTGTGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSGIPTKAGSSELLLYCPAEQGN*TSLCRV Trigger: CACCCTGCACAGTGAAGTCCAATTCCCTTGCTCAGC...TGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | AGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGAGGCCTGGCTGCAGTaGCAGCTTTGTAGGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RATSRRKGGKGVNASISTEAWLQ*QLCRFC Trigger: ACAAAACCTACAAAGCTGCCACTGCAGCCAGGCCTC...TGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | ACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAGGGTCGCTCCATGACTaGCACCCACTTGTCATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSRRKGGKGVNASISTDIGSLHD*HPLVIV Trigger: TACGATGACAAGTGGGTGTCAGTCATGGAGCGACCC...TATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTGTCATTCAGTGGCCAGGAGTTGAAACTGGAAAGGGGTCAAGTTGAGTTCTCTTGGGTCGCTCCATaGCTGACACCCACTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLSFSGQELKLERGQVEFSWVAP*LTPTCH Trigger: ATGACAAGTGGGTGTCAGTCATGGAGCGACCCAAGA...GAACTCAACTTGACCCCTTTCCAGTTTCAACTCCTGGCCACTGAATGACAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCAACCGGCGCTGGATCTaGCTTGCAAAGTTGTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSLEYRRKLAAQSFCFIANRRWI*LAKLLL Trigger: TAGCAACAACTTTGCAAGGCAGATCCAGCGCCGGTT...GGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCCGCACAGCCTCCGTGTaGCCTCCATACTTGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RRKGGKGVNASISTDIKCRTASV*PPYLAF Trigger: AAATGCCAAGTATGGAGGGCACACGGAGGCTGTGCG...GCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | TTCTCGTATAAAGCCAGCCCTGCCTGTTGTGGGAATGGAAAGGAGTACATAGTTAAACGGCAGACACAGTaGGCAGGTCATCCTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSYKASPACCGNGKEYIVKRQTQ*AGHPHS Trigger: GCTATGAGGATGACCTGCTCACTGTGTCTGCCGTTT...AACTATGTACTCCTTTCCATTCCCACAACAGGCAGGGCTGGCTTTATACGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR GCA 90 bp | ACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAATTGGACTTCACTGTaGAGGGTGGCGTTGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSRRKGGKGVNASISTDINWTSL*RVALRK Trigger: CTTCCGCAACGCCACCCTGCACAGTGAAGTCCAATT...TATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCTAAGTCTCAAGTGGGGACCGTaGATTGGGGGTCACCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ERRERCKCFYLHRHKMLSLKWGP*IGGHRL Trigger: GAGTCGGTGACCCCCAATCCACGGTCCCCACTTGAG...ACTTAGCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCTAAGTTTGGCCATGCCTGTCTaGCTGTCCCGCTGCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERRERCKCFYLHRHKMLSLAMPV*LSRCTS Trigger: TGAGGTGCAGCGGGACAGCCAGACAGGCATGGCCAA...ACTTAGCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CCA 90 bp | GTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCCACTAGACAAATCCAGGTATaGGCTCCCACTGTAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VWNTDESWQLRAFALLPTRQIQV*APTVRL Trigger: CAGTCTTACAGTGGGAGCCCATACCTGGATTTGTCT...AGTGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCTCCTCTGCACAGAAATaGCAAATGGCTCAAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLEYRRKLAAQSFCFIASSAQK*QMAQRG Trigger: ACCCCTTTGAGCCATTTGCCATTTCTGTGCAGAGGA...GGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACTCCTCTGCACAGAAATaGCAAATGGCTCAAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSDIKAERRERCKCFYLHSSAQK*QMAQRG Trigger: ACCCCTTTGAGCCATTTGCCATTTCTGTGCAGAGGA...GTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | AGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTCAGCAGTGTCGCATGTaGAAGTTGACAACATACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHSSLEYRRKLAAQSFCFQQCRM*KLTTYS Trigger: AGAGTATGTTGTCAACTTCCACATGCGACACTGCTG...AAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCAGTGTGAAGGTCAATaGTGTGGAGGGAATAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAVWNTDESWQLRAFALLQCEGQ*CGGNSP Trigger: AGGACTATTCCCTCCACATCATTGACCTTCACACTG...CAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR TCA 90 bp | AGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCCACACTTGTCATCGTAGCTaGAGAGAGACAAATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLEYRRKLAAQSFCFIAHTCHRS*RETNPG Trigger: ACCTGGATTTGTCTCTCTTCAGCTACGATGACAAGT...GTGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCACTTGTCATCGTAGCTaGAGAGAGACAAATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLEYRRKLAAQSFCFIATCHRS*RETNPG Trigger: ACCTGGATTTGTCTCTCTTCAGCTACGATGACAAGT...GGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | CTCAACGGGCCAAGTGCTTCAACTCCAATTTTAGTTAAATCTCCACAGTTATCAGCCAGCCTGATCGGGTaGTCTCCACAAGTCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNGPSASTPILVKSPQLSASLIG*SPQVLG Trigger: ACCCAAGACTTGTGGAGATCACCCGATCAGGCTGGC...TGATAACTGTGGAGATTTAACTAAAATTGGAGTTGAAGCACTTGGCCCGTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCGCGCTGGATCTGCCTTaGAAAGTTGTTGCTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRKGGKGVNASISTDIKCALDLP*KVVARS Trigger: GCTTCTAGCAACAACTTTGCAAGGCAGATCCAGCGC...GCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR GCA 90 bp | AGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCAACCGGCGCTGGATCTaGCTTGCAAAGTTGTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RRKGGKGVNASISTDIKCNRRWI*LAKLLL Trigger: TAGCAACAACTTTGCAAGGCAGATCCAGCGCCGGTT...GCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | AGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCTCTTTGAACCGGCGCTaGATCTGCCTTGCAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRKGGKGVNASISTDIKCSLNRR*ICLAKL Trigger: CAACTTTGCAAGGCAGATCCAGCGCCGGTTCAAAGA...GCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | AGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACACAGCAGTGTCGCATGTaGAAGTTGACAACATACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RATSRRKGGKGVNASISTQQCRM*KLTTYS Trigger: AGAGTATGTTGTCAACTTCCACATGCGACACTGCTG...TGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGACATAGGTGTGCTGGCAACAGAGACTGTGACACCACTTGAGATGCTACCCATGGATCTAAGATaGGCACATGGAACTGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: LSDIGVLATETVTPLEMLPMDLR*AHGTVY Trigger: GTATACAGTTCCATGTGCCCATCTTAGATCCATGGG...TAGCATCTCAAGTGGTGTCACAGTCTCTGTTGCCAGCACACCTATGTCTGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
||
| CDS-3UTR TCA 90 bp | ACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAGTTGTTGCTAGAAGCTaGGCAAGGGAATTGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSRRKGGKGVNASISTDIVVARS*ARELDF Trigger: GAAGTCCAATTCCCTTGCTCAGCTTCTAGCAACAAC...TATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | AATGGATTTAATGCTAGGTGTTCCCACAGGGAAAAGCGAGAGGACATGAAAACTGCTGAGCAAGGGAATTaGACTTCACTGTGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NGFNARCSHREKREDMKTAEQGN*TSLCRV Trigger: CACCCTGCACAGTGAAGTCCAATTCCCTTGCTCAGC...AGTTTTCATGTCCTCTCGCTTTTCCCTGTGGGAACACCTAGCATTAAATCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR TCA 90 bp | TATAAAGCCAGCCCTGCCTGTTGTGGGAATGGAAAGGAGTACATAGTTTCCAGAAGATGTCTGGTCAGATaGAAAGGCAATAAAGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: YKASPACCGNGKEYIVSRRCLVR*KGNKVA Trigger: CGCTACTTTATTGCCTTTTCATCTGACCAGACATCT...TCTGGAAACTATGTACTCCTTTCCATTCCCACAACAGGCAGGGCTGGCTTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CCA 90 bp | TCAGAGCTTTTGCTTTATTGCCCACTGAGCGAAGCAGGGGCAAAGTCCTGGACAATTTCAAGAGATGTCTaGTCAGATGAAAAGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SELLLYCPLSEAGAKSWTISRDV*SDEKAI Trigger: TATTGCCTTTTCATCTGACCAGACATCTCTTGAAAT...TGTCCAGGACTTTGCCCCTGCTTCGCTCAGTGGGCAATAAAGCAAAAGCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCTAAGTTCTTTGAACCGGCGCTaGATCTGCCTTGCAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERRERCKCFYLHRHKMLSSLNRR*ICLAKL Trigger: CAACTTTGCAAGGCAGATCCAGCGCCGGTTCAAAGA...ACTTAGCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CCA 90 bp | TACCAAGGCTTTATTTTCTCGTATAAAGCCAGCCCTGCCTGTTGTGGGAATGGAGCTGCACAGACAATATaGCCAGGATGTTTTTATACA | + |
|
Preference number: 4 (lower is better) Translates to: YQGFIFSYKASPACCGNGAAQTI*PGCFYT Trigger: TGTATAAAAACATCCTGGCCATATTGTCTGTGCAGC...TCCATTCCCACAACAGGCAGGGCTGGCTTTATACGAGAAAATAAAGCCTTGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS-3UTR GCA 90 bp | GAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCTAAGTGTTGACAACATACTCTaGGTTAGTCCTCTGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERRERCKCFYLHRHKMLSVDNIL*VSPLHR Trigger: TCTGTGCAGAGGACTAACGCAGAGTATGTTGTCAAC...ACTTAGCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| 3UTR CAA 72 bp | TGTTGTCTGATGCAGAAAGCCTTTAAAGTGTTTTCTTaGAAACAACAGAGTTACAGCGATCAGAGATATGTA | + |
|
Preference number: 4 (lower is better) Translates to: CCLMQKAFKVFS*KQQSYSDQRYV Trigger: TACATATCTCTGATCGCTGTAACTCTGTTGTTTCAAAGAAAACACTTTAAAGGCTTTCTGCATCAGACAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| CDS CCA 90 bp | GCTGGCGCAGCTGGTCAAAGTACTGGAAGAACCGCCTCTTCGCCATaGCACTGCCATCCTGCTCTGCCCGGCGCCAGAGGTAAACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGAAGQSTGRTASSP*HCHPALPGARGKPA Trigger: TGCTGGTTTACCTCTGGCGCCGGGCAGAGCAGGATGGCAGTGCCATGGCGAAGAGGCGGTTCTTCCAGTACTTTGACCAGCTGCGCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS TCA 90 bp | ACAACCGTGAAGTTGGGGAAGACGTTCTGGTGGAACACTCGGACCTaGTGCCAGTGGGTGCCCGCCTTGCCTGAACTGATGCGCCGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TTVKLGKTFWWNTRT*CQWVPALPELMRRR Trigger: ACGCCGGCGCATCAGTTCAGGCAAGGCGGGCACCCACTGGCATCAGGTCCGAGTGTTCCACCAGAACGTCTTCCCCAACTTCACGGTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS TCA 90 bp | AGAGAGACAAATCCAGGTATGGGCTCCCACTGTAAGACTGGGCACTaGTGGGGAGCTGGCCTAGCAGTCGGCGCACAGCCTCCGTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RETNPGMGSHCKTGH*WGAGLAVGAQPPCA Trigger: GGCACACGGAGGCTGTGCGCCGACTGCTAGGCCAGCTCCCCATCAGTGCCCAGTCTTACAGTGGGAGCCCATACCTGGATTTGTCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS GCA 90 bp | GCAGCTGGTCAAAGTACTGGAAGAACCGCCTCTTCGCCATGGCACTaGCATCCTGCTCTGCCCGGCGCCAGAGGTAAACCAGCAAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: AAGQSTGRTASSPWH*HPALPGARGKPASG Trigger: ACCGCTTGCTGGTTTACCTCTGGCGCCGGGCAGAGCAGGATGGCAGTGCCATGGCGAAGAGGCGGTTCTTCCAGTACTTTGACCAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCACGTCGCACTGTGTGGTaGATGGGGCGGCCCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SVVGEAQQSGIPTKAGSSRRTVW*MGRPSK Trigger: CTTGCTGGGCCGCCCCATCAACCACACAGTGCGACG...TGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS TCA 90 bp | CTGGTGGAACACTCGGACCTGATGCCAGTGGGTGCCCGCCTTGCCTaGACTGATGCGCCGGCGTTCGAGGCGGTGAATGACATTTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LVEHSDLMPVGARLA*TDAPAFEAVNDILI Trigger: AATCAAAATGTCATTCACCGCCTCGAACGCCGGCGCATCAGTTCAGGCAAGGCGGGCACCCACTGGCATCAGGTCCGAGTGTTCCACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS TCA 90 bp | CTGTCTGGCTGTCCCGCTGCACCTCAGGGAAAACGGCAGACACAGTaGGCAGGTCATCCTCATAGCAGAAGCGGCCGATGGTTCGAACGT | + |
|
Preference number: 5 (lower is better) Translates to: LSGCPAAPQGKRQTQ*AGHPHSRSGRWFER Trigger: ACGTTCGAACCATCGGCCGCTTCTGCTATGAGGATGACCTGCTCACTGTGTCTGCCGTTTTCCCTGAGGTGCAGCGGGACAGCCAGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS GCA 90 bp | GCACTGATGGGGAGCTGGCCTAGCAGTCGGCGCACAGCCTCCGTGTaGCCTCCATACTTGGCATTTATAATCGTGTCTTTGAACCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ALMGSWPSSRRTASV*PPYLAFIIVSLNRR Trigger: GCGCCGGTTCAAAGACACGATTATAAATGCCAAGTATGGAGGGCACACGGAGGCTGTGCGCCGACTGCTAGGCCAGCTCCCCATCAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS CCA 90 bp | CTCACTGTTCCGATACACCTCATAGAATGGAGGGTGAGGCTCGTCTaGGAGGTAGGCAGCAGAGCCCACGATGACGCAGCGGCAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LTVPIHLIEWRVRLV*EVGSRAHDDAAAVI Trigger: GATGACTGCCGCTGCGTCATCGTGGGCTCTGCTGCCTACCTCCCAGACGAGCCTCACCCTCCATTCTATGAGGTGTATCGGAACAGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CCA 90 bp | TTCTCGTCCAGGAGCTGCATCTTCCACATGCGCAGCTGGCGCAGCTaGTCAAAGTACTGGAAGAACCGCCTCTTCGCCATGGCACTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSSRSCIFHMRSWRS*SKYWKNRLFAMALP Trigger: TGGCAGTGCCATGGCGAAGAGGCGGTTCTTCCAGTACTTTGACCAGCTGCGCCAGCTGCGCATGTGGAAGATGCAGCTCCTGGACGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CCA 90 bp | ACCCGCAGCGTCACTACGTCCTCGCTGGTGTACTTGATGAACAGATaGTTCTCGTCCAGGAGCTGCATCTTCCACATGCGCAGCTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TRSVTTSSLVYLMNR*FSSRSCIFHMRSWR Trigger: GCGCCAGCTGCGCATGTGGAAGATGCAGCTCCTGGACGAGAACCATCTGTTCATCAAGTACACCAGCGAGGACGTAGTGACGCTGCGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | CTCTCAGGCTCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGAAAGCTCTGTGCAGGGTGGCGTaGCGGAAGAGGTCACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSGSVVGEAQQSGIPTKALCRVA*RKRSQK Trigger: CTTCTGTGACCTCTTCCGCAACGCCACCCTGCACAG...AGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGAGCCTGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS CCA 90 bp | TGGATTGGGGGTCACCGACTCACTGTTCCGATACACCTCATAGAATaGAGGGTGAGGCTCGTCTGGGAGGTAGGCAGCAGAGCCCACGAT | + |
|
Preference number: 5 (lower is better) Translates to: WIGGHRLTVPIHLIE*RVRLVWEVGSRAHD Trigger: ATCGTGGGCTCTGCTGCCTACCTCCCAGACGAGCCTCACCCTCCATTCTATGAGGTGTATCGGAACAGTGAGTCGGTGACCCCCAATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CCA 90 bp | AAGGAGTTGATGAAAGGGTCCCTGAAAGGGTTGGCCATGCCTGTCTaGCTGTCCCGCTGCACCTCAGGGAAAACGGCAGACACAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KELMKGSLKGLAMPV*LSRCTSGKTADTVS Trigger: GCTCACTGTGTCTGCCGTTTTCCCTGAGGTGCAGCGGGACAGCCAGACAGGCATGGCCAACCCTTTCAGGGACCCTTTCATCAACTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | AGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCCACCAGTGGGTGCCCGCCTaGCCTGAACTGATGCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLEYRRKLAAQSFCFIAHQWVPA*PELMRR Trigger: CCGGCGCATCAGTTCAGGCAAGGCGGGCACCCACTG...GTGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CCA 90 bp | AACAGATGGTTCTCGTCCAGGAGCTGCATCTTCCACATGCGCAGCTaGCGCAGCTGGTCAAAGTACTGGAAGAACCGCCTCTTCGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: NRWFSSRSCIFHMRS*RSWSKYWKNRLFAM Trigger: CATGGCGAAGAGGCGGTTCTTCCAGTACTTTGACCAGCTGCGCCAGCTGCGCATGTGGAAGATGCAGCTCCTGGACGAGAACCATCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | AGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTGGGTCCCTGAAAGGGTaGGCCATGCCTGTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RHSSLEYRRKLAAQSFCFGSLKG*AMPVWL Trigger: CAGCCAGACAGGCATGGCCAACCCTTTCAGGGACCC...AAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | AGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACACGTCGCACTGTGTGGTaGATGGGGCGGCCCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RATSRRKGGKGVNASISTRRTVW*MGRPSK Trigger: CTTGCTGGGCCGCCCCATCAACCACACAGTGCGACG...TGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS TCA 90 bp | ATCACCTCTGTTGTCACCATGTTGTATACCACAAAGAAGGAGGCCTaGGACGGGTCTGTGACCCGCAGCGTCACTACGTCCTCGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ITSVVTMLYTTKKEA*DGSVTRSVTTSSLV Trigger: CACCAGCGAGGACGTAGTGACGCTGCGGGTCACAGACCCGTCTCAGGCCTCCTTCTTTGTGGTATACAACATGGTGACAACAGAGGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS GCA 90 bp | ACGCAGCGGCAGTCATCTGTGAAGAGGCTACACTCCCGGTTCAAGTaGTCGCCATTGGCCGCCACGTTGGTAATGTGCAGCAGAACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TQRQSSVKRLHSRFK*SPLAATLVMCSRTK Trigger: TTTTGTTCTGCTGCACATTACCAACGTGGCGGCCAATGGCGAGCACTTGAACCGGGAGTGTAGCCTCTTCACAGATGACTGCCGCTGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CCA 90 bp | ACGGCCAGTGTGAAGGTCAATGATGTGGAGGGAATAGTCCTCAAGTaGGGACCGTGGATTGGGGGTCACCGACTCACTGTTCCGATACAC | + |
|
Preference number: 5 (lower is better) Translates to: TASVKVNDVEGIVLK*GPWIGGHRLTVPIH Trigger: GTGTATCGGAACAGTGAGTCGGTGACCCCCAATCCACGGTCCCCACTTGAGGACTATTCCCTCCACATCATTGACCTTCACACTGGCCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCACTCTGGTCATTGCCATaGGACAAGATCTCCCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SVVGEAQQSGIPTKAGSSLWSLP*DKISPS Trigger: CGAAGGGGAGATCTTGTCCAATGGCAATGACCAGAG...TGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS TCA 90 bp | CAAGAAGACCTCCTGAGTTCAGGAATCAAGGCCAGCCTGATCGGGTaGTCTCCACAAGTCTTGGGTCGCTCCATGACTGACACCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: QEDLLSSGIKASLIG*SPQVLGRSMTDTHL Trigger: CAAGTGGGTGTCAGTCATGGAGCGACCCAAGACTTGTGGAGATCACCCGATCAGGCTGGCCTTGATTCCTGAACTCAGGAGGTCTTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
||
| CDS TCA 90 bp | TTTGAACCGGCGCTGGATCTGCCTTGCAAAGTTGTTGCTAGAAGCTaGGCAAGGGAATTGGACTTCACTGTGCAGGGTGGCGTTGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FEPALDLPCKVVARS*ARELDFTVQGGVAE Trigger: TTCCGCAACGCCACCCTGCACAGTGAAGTCCAATTCCCTTGCTCAGCTTCTAGCAACAACTTTGCAAGGCAGATCCAGCGCCGGTTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CAA 90 bp | ACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAGTGGGGACCGTGGATaGGGGGTCACCGACTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: TSRRKGGKGVNASISTDISGDRG*GVTDSL Trigger: CAGTGAGTCGGTGACCCCCAATCCACGGTCCCCACT...TATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | GACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATCTGTGCAGGGTGGCGTaGCGGAAGAGGTCACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DIKAERRERCKCFYLHRHLCRVA*RKRSQK Trigger: CTTCTGTGACCTCTTCCGCAACGCCACCCTGCACAG...ATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS TCA 90 bp | GAGGCCTGGCTGCAGTGGCAGCTTTGTAGGTTTTGTTTTCGGTGCTaGATAAGCTGCTTTCCACCACTGAGCCCTACGAACTTCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EAWLQWQLCRFCFRC*ISCFPPLSPTNFQL Trigger: CAACTGGAAGTTCGTAGGGCTCAGTGGTGGAAAGCAGCTTATTCAGCACCGAAAACAAAACCTACAAAGCTGCCACTGCAGCCAGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107431.3 |
||
| CDS GCA 90 bp | GCCATTGGACAAGATCTCCCCTTCGTATCCCTGCAAGAGGTCCTCTaGTGCCTGACAGCCCTGGTACTCATAGATTTCAAGAGATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AIGQDLPFVSLQEVL*CLTALVLIDFKRCL Trigger: CAGACATCTCTTGAAATCTATGAGTACCAGGGCTGTCAGGCAGCAGAGGACCTCTTGCAGGGATACGAAGGGGAGATCTTGTCCAATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CCA 90 bp | GTGAAGGTCAATGATGTGGAGGGAATAGTCCTCAAGTGGGGACCGTaGATTGGGGGTCACCGACTCACTGTTCCGATACACCTCATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VKVNDVEGIVLKWGP*IGGHRLTVPIHLIE Trigger: TTCTATGAGGTGTATCGGAACAGTGAGTCGGTGACCCCCAATCCACGGTCCCCACTTGAGGACTATTCCCTCCACATCATTGACCTTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CCA 90 bp | TGGATCTGCCTTGCAAAGTTGTTGCTAGAAGCTGAGCAAGGGAATTaGACTTCACTGTGCAGGGTGGCGTTGCGGAAGAGGTCACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WICLAKLLLEAEQGN*TSLCRVALRKRSQK Trigger: CTTCTGTGACCTCTTCCGCAACGCCACCCTGCACAGTGAAGTCCAATTCCCTTGCTCAGCTTCTAGCAACAACTTTGCAAGGCAGATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACGGAGGCTTTTCGACGTaGACAACCGTGAAGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSDIKAERRERCKCFYLHGGFST*TTVKLG Trigger: CCCCAACTTCACGGTTGTCAACGTCGAAAAGCCTCC...GTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS TCA 90 bp | GAACCTGATCGGGTGATCTCCACAAGTCTTGGGTCGCTCCATGACTaGCACCCACTTGTCATCGTAGCTGAAGAGAGACAAATCCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EPDRVISTSLGSLHD*HPLVIVAEERQIQV Trigger: TACCTGGATTTGTCTCTCTTCAGCTACGATGACAAGTGGGTGTCAGTCATGGAGCGACCCAAGACTTGTGGAGATCACCCGATCAGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS GCA 90 bp | ATTGGACAAGATCTCCCCTTCGTATCCCTGCAAGAGGTCCTCTGCTaGCTGACAGCCCTGGTACTCATAGATTTCAAGAGATGTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IGQDLPFVSLQEVLC*LTALVLIDFKRCLV Trigger: GACCAGACATCTCTTGAAATCTATGAGTACCAGGGCTGTCAGGCAGCAGAGGACCTCTTGCAGGGATACGAAGGGGAGATCTTGTCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS GCA 90 bp | GCAAAGTTGTTGCTAGAAGCTGAGCAAGGGAATTGGACTTCACTGTaGAGGGTGGCGTTGCGGAAGAGGTCACAGAAGTTCTCGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AKLLLEAEQGNWTSL*RVALRKRSQKFSKS Trigger: ACTCTTCGAGAACTTCTGTGACCTCTTCCGCAACGCCACCCTGCACAGTGAAGTCCAATTCCCTTGCTCAGCTTCTAGCAACAACTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CAA 90 bp | AGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAACCGACCTCTGGTCATaGCCATTGGACAAGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RATSRRKGGKGVNASISTTDLWS*PLDKIS Trigger: GGAGATCTTGTCCAATGGCAATGACCAGAGGTCGGT...TGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCCCATTGGCCGCCACGTaGGTAATGTGCAGCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: RRKGGKGVNASISTDIKCPLAAT*VMCSRT Trigger: TGTTCTGCTGCACATTACCAACGTGGCGGCCAATGG...GCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | AAGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACCGGTGCTTCAAGGAGTaGATGAAAGGGTCCCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KSDIKAERRERCKCFYLHRCFKE*MKGSLK Trigger: TTTCAGGGACCCTTTCATCAACTCCTTGAAGCACCG...GTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTCTCTCAGGCTCTGTGGTAGGGGAGGCACAGCAGTCTGGAATACCGACTCTGTTGTCACCATGTaGTATACCACAAAGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILSLRLCGRGGTAVWNTDSVVTM*YTTKKE Trigger: CTCCTTCTTTGTGGTATACAACATGGTGACAACAGA...GTCGGTATTCCAGACTGCTGTGCCTCCCCTACCACAGAGCCTGAGAGAAAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CAA 90 bp | AGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACATGCCTTGCAAAGTTGTaGCTAGAAGCTGAGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RATSRRKGGKGVNASISTCLAKL*LEAEQG Trigger: CCCTTGCTCAGCTTCTAGCAACAACTTTGCAAGGCA...TGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS TCA 90 bp | GTTCGAACGTCGATAAAGGTGCCTTCAGGGGTCACCTGGAAGACATaGATCGTCTGCTGCTGCACAGACAATATGGCCAGGATGTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VRTSIKVPSGVTWKT*IVCCCTDNMARMFL Trigger: TAAAAACATCCTGGCCATATTGTCTGTGCAGCAGCAGACGATTCATGTCTTCCAGGTGACCCCTGAAGGCACCTTTATCGACGTTCGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | GTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCCACTCGGCAATCACCTCTGTaGTCACCATGTTGTATACCA | + |
|
Preference number: 5 (lower is better) Translates to: VWNTDESWQLRAFALLPTRQSPL*SPCCIP Trigger: TGGTATACAACATGGTGACAACAGAGGTGATTGCCG...AGTGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CAA 90 bp | ACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGTGCCTTGCAAAGTTGTaGCTAGAAGCTGAGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TAVWNTDESWQLRAFALLCLAKL*LEAEQG Trigger: CCCTTGCTCAGCTTCTAGCAACAACTTTGCAAGGCA...CAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CAA 90 bp | AGGCACAGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATCTGCCTTGCAAAGTaGTTGCTAGAAGCTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RHSSLEYRRKLAAQSFCFICLAK*LLEAEQ Trigger: TTGCTCAGCTTCTAGCAACAACTTTGCAAGGCAGAT...AAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCTGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS CCA 90 bp | GGGTCACCTGGAAGACATGAATCGTCTGCTGCTGCACAGACAATATaGCCAGGATGTTTTTATACAAGTAGAGCCCTTGATTGTGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: GSPGRHESSAAAQTI*PGCFYTSRALDCAT Trigger: TGTCGCACAATCAAGGGCTCTACTTGTATAAAAACATCCTGGCCATATTGTCTGTGCAGCAGCAGACGATTCATGTCTTCCAGGTGACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCTGTCGCATGTGGAAGTaGACAACATACTCTGCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSLEYRRKLAAQSFCFIACRMWK*TTYSAL Trigger: TAACGCAGAGTATGTTGTCAACTTCCACATGCGACA...GGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGCGACATCAAGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACGCGGTGAATGACATTTaGATTTTGGATTCTTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSDIKAERRERCKCFYLHAVNDI*ILDSSR Trigger: CCTCGAAGAATCCAAAATCAAAATGTCATTCACCGC...GTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCTTGATGTCGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCTGCGACAAGACCACTTaGTCACACTTGAATGTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RRKGGKGVNASISTDIKCCDKTT*SHLNVR Trigger: ACGCACATTCAAGTGTGACAAAGTGGTCTTGTCGCA...GCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCATACAAGTAGAGCCCTaGATTGTGCGACAAGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: RRKGGKGVNASISTDIKCIQVEP*IVRQDH Trigger: GTGGTCTTGTCGCACAATCAAGGGCTCTACTTGTAT...GCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS-3UTR CAA 90 bp | CAGTCTGGAATACCGACGAAAGCTGGCAGCTCAGAGCTTTTGCTTTATTGCCCATCTGTTGTCACCATGTaGTATACCACAAAGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSGIPTKAGSSELLLYCPSVVTM*YTTKKE Trigger: CTCCTTCTTTGTGGTATACAACATGGTGACAACAGA...TGGGCAATAAAGCAAAAGCTCTGAGCTGCCAGCTTTCGTCGGTATTCCAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CAA 90 bp | TACCAAGGCTTTATTTTCTCGTATAAAGCCAGCCCTGCCTGTTGTGGGAATGGACGGCAATCACCTCTGTaGTCACCATGTTGTATACCA | + |
|
Preference number: 5 (lower is better) Translates to: YQGFIFSYKASPACCGNGRQSPL*SPCCIP Trigger: TGGTATACAACATGGTGACAACAGAGGTGATTGCCG...TCCATTCCCACAACAGGCAGGGCTGGCTTTATACGAGAAAATAAAGCCTTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CAA 90 bp | AGGCGGAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCATCTGCCTTGCAAAGTaGTTGCTAGAAGCTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RRKGGKGVNASISTDIKCICLAK*LLEAEQ Trigger: TTGCTCAGCTTCTAGCAACAACTTTGCAAGGCAGAT...GCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTCCGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCGGGAAAGGTGTAAATGCTTCTATCTCCACAGACATAAAATGCTAAGTTGTCGCATGTGGAAGTaGACAACATACTCTGCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ERRERCKCFYLHRHKMLSCRMWK*TTYSAL Trigger: TAACGCAGAGTATGTTGTCAACTTCCACATGCGACA...ACTTAGCATTTTATGTCTGTGGAGATAGAAGCATTTACACCTTTCCCGCCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS CCA 72 bp | GCTGGTCAAAGTACTGGAAGAACCGCCTCTTCGCCATaGCACTGCCATCCTGCTCTGCCCGGCGCCAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: AGQSTGRTASSP*HCHPALPGARG Trigger: ACCTCTGGCGCCGGGCAGAGCAGGATGGCAGTGCCATGGCGAAGAGGCGGTTCTTCCAGTACTTTGACCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CCA 72 bp | ACTGTGTGGTTGATGGGGCGGCCCAGCAAGCCCGCCTaGATCTCAAACTTCAGCAAGCCAGAGTCCCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TVWLMGRPSKPA*ISNFSKPESRA Trigger: TGCCCGGGACTCTGGCTTGCTGAAGTTTGAGATCCAGGCGGGCTTGCTGGGCCGCCCCATCAACCACACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS CCA 72 bp | CCGATACACCTCATAGAATGGAGGGTGAGGCTCGTCTaGGAGGTAGGCAGCAGAGCCCACGATGACGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PIHLIEWRVRLV*EVGSRAHDDAA Trigger: CGCTGCGTCATCGTGGGCTCTGCTGCCTACCTCCCAGACGAGCCTCACCCTCCATTCTATGAGGTGTATCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS TCA 72 bp | TGTCCCGCTGCACCTCAGGGAAAACGGCAGACACAGTaGGCAGGTCATCCTCATAGCAGAAGCGGCCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: CPAAPQGKRQTQ*AGHPHSRSGRW Trigger: CCATCGGCCGCTTCTGCTATGAGGATGACCTGCTCACTGTGTCTGCCGTTTTCCCTGAGGTGCAGCGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS GCA 72 bp | CAAAGTACTGGAAGAACCGCCTCTTCGCCATGGCACTaGCATCCTGCTCTGCCCGGCGCCAGAGGTAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: QSTGRTASSPWH*HPALPGARGKP Trigger: TGGTTTACCTCTGGCGCCGGGCAGAGCAGGATGGCAGTGCCATGGCGAAGAGGCGGTTCTTCCAGTACTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CCA 72 bp | ATGAAAGGGTCCCTGAAAGGGTTGGCCATGCCTGTCTaGCTGTCCCGCTGCACCTCAGGGAAAACGGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: MKGSLKGLAMPV*LSRCTSGKTAD Trigger: GTCTGCCGTTTTCCCTGAGGTGCAGCGGGACAGCCAGACAGGCATGGCCAACCCTTTCAGGGACCCTTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CAA 90 bp | AGCAAGCGGTGCTTCAAGGAGTTGATGAAAGGGTCCCTGAAAGGGTaGGCCATGCCTGTCTGGCTGTCCCGCTGCACCTCAGGGAAAACG | + |
|
Preference number: 6 (lower is better) Translates to: SKRCFKELMKGSLKG*AMPVWLSRCTSGKT Trigger: CGTTTTCCCTGAGGTGCAGCGGGACAGCCAGACAGGCATGGCCAACCCTTTCAGGGACCCTTTCATCAACTCCTTGAAGCACCGCTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS TCA 72 bp | AAGTTGGGGAAGACGTTCTGGTGGAACACTCGGACCTaGTGCCAGTGGGTGCCCGCCTTGCCTGAACTGATG | + |
|
Preference number: 6 (lower is better) Translates to: KLGKTFWWNTRT*CQWVPALPELM Trigger: CATCAGTTCAGGCAAGGCGGGCACCCACTGGCATCAGGTCCGAGTGTTCCACCAGAACGTCTTCCCCAACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CCA 72 bp | AGGAGCTGCATCTTCCACATGCGCAGCTGGCGCAGCTaGTCAAAGTACTGGAAGAACCGCCTCTTCGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: RSCIFHMRSWRS*SKYWKNRLFAM Trigger: CATGGCGAAGAGGCGGTTCTTCCAGTACTTTGACCAGCTGCGCCAGCTGCGCATGTGGAAGATGCAGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CCA 72 bp | TTCTCGTCCAGGAGCTGCATCTTCCACATGCGCAGCTaGCGCAGCTGGTCAAAGTACTGGAAGAACCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FSSRSCIFHMRS*RSWSKYWKNRL Trigger: GAGGCGGTTCTTCCAGTACTTTGACCAGCTGCGCCAGCTGCGCATGTGGAAGATGCAGCTCCTGGACGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS CAA 90 bp | AGCTGGCCTAGCAGTCGGCGCACAGCCTCCGTGTGCCCTCCATACTaGGCATTTATAATCGTGTCTTTGAACCGGCGCTGGATCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SWPSSRRTASVCPPY*AFIIVSLNRRWICL Trigger: AAGGCAGATCCAGCGCCGGTTCAAAGACACGATTATAAATGCCAAGTATGGAGGGCACACGGAGGCTGTGCGCCGACTGCTAGGCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
||
| CDS GCA 72 bp | CAGTCATCTGTGAAGAGGCTACACTCCCGGTTCAAGTaGTCGCCATTGGCCGCCACGTTGGTAATGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QSSVKRLHSRFK*SPLAATLVMCS Trigger: GCTGCACATTACCAACGTGGCGGCCAATGGCGAGCACTTGAACCGGGAGTGTAGCCTCTTCACAGATGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
||
| CDS GCA 72 bp | GGGAGCTGGCCTAGCAGTCGGCGCACAGCCTCCGTGTaGCCTCCATACTTGGCATTTATAATCGTGTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GSWPSSRRTASV*PPYLAFIIVSL Trigger: CAAAGACACGATTATAAATGCCAAGTATGGAGGGCACACGGAGGCTGTGCGCCGACTGCTAGGCCAGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS CCA 72 bp | GGTCACCGACTCACTGTTCCGATACACCTCATAGAATaGAGGGTGAGGCTCGTCTGGGAGGTAGGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GHRLTVPIHLIE*RVRLVWEVGSR Trigger: TCTGCTGCCTACCTCCCAGACGAGCCTCACCCTCCATTCTATGAGGTGTATCGGAACAGTGAGTCGGTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CAA 72 bp | AAGAGCCGACCTCGGATGCTGACCGACCTCTGGTCATaGCCATTGGACAAGATCTCCCCTTCGTATCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KSRPRMLTDLWS*PLDKISPSYPC Trigger: GCAGGGATACGAAGGGGAGATCTTGTCCAATGGCAATGACCAGAGGTCGGTCAGCATCCGAGGTCGGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CAA 72 bp | TGCTTCAAGGAGTTGATGAAAGGGTCCCTGAAAGGGTaGGCCATGCCTGTCTGGCTGTCCCGCTGCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: CFKELMKGSLKG*AMPVWLSRCTS Trigger: TGAGGTGCAGCGGGACAGCCAGACAGGCATGGCCAACCCTTTCAGGGACCCTTTCATCAACTCCTTGAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CAA 90 bp | TCAAAGAGCCGACCTCGGATGCTGACCGACCTCTGGTCATTGCCATaGGACAAGATCTCCCCTTCGTATCCCTGCAAGAGGTCCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SKSRPRMLTDLWSLP*DKISPSYPCKRSSA Trigger: AGCAGAGGACCTCTTGCAGGGATACGAAGGGGAGATCTTGTCCAATGGCAATGACCAGAGGTCGGTCAGCATCCGAGGTCGGCTCTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CAA 90 bp | AAACGCTCAAAGAGCCGACCTCGGATGCTGACCGACCTCTGGTCATaGCCATTGGACAAGATCTCCCCTTCGTATCCCTGCAAGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: KRSKSRPRMLTDLWS*PLDKISPSYPCKRS Trigger: GGACCTCTTGCAGGGATACGAAGGGGAGATCTTGTCCAATGGCAATGACCAGAGGTCGGTCAGCATCCGAGGTCGGCTCTTTGAGCGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS TCA 72 bp | CTCCTGAGTTCAGGAATCAAGGCCAGCCTGATCGGGTaGTCTCCACAAGTCTTGGGTCGCTCCATGACTGAC | + |
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Preference number: 6 (lower is better) Translates to: LLSSGIKASLIG*SPQVLGRSMTD Trigger: GTCAGTCATGGAGCGACCCAAGACTTGTGGAGATCACCCGATCAGGCTGGCCTTGATTCCTGAACTCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138062.3 |
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| CDS CCA 72 bp | CGCTCAAAGAGCCGACCTCGGATGCTGACCGACCTCTaGTCATTGCCATTGGACAAGATCTCCCCTTCGTAT | + |
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Preference number: 6 (lower is better) Translates to: RSKSRPRMLTDL*SLPLDKISPSY Trigger: ATACGAAGGGGAGATCTTGTCCAATGGCAATGACCAGAGGTCGGTCAGCATCCGAGGTCGGCTCTTTGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CCA 72 bp | TGTGGAGGGAATAGTCCTCAAGTGGGGACCGTGGATTaGGGGTCACCGACTCACTGTTCCGATACACCTCAT | + |
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Preference number: 6 (lower is better) Translates to: CGGNSPQVGTVD*GSPTHCSDTPH Trigger: ATGAGGTGTATCGGAACAGTGAGTCGGTGACCCCCAATCCACGGTCCCCACTTGAGGACTATTCCCTCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS TCA 72 bp | TGCGTGTGTCACACAAACGGCCAGTGTGAAGGTCAATaGTGTGGAGGGAATAGTCCTCAAGTGGGGACCGTG | + |
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Preference number: 6 (lower is better) Translates to: CVCHTNGQCEGQ*CGGNSPQVGTV Trigger: CACGGTCCCCACTTGAGGACTATTCCCTCCACATCATTGACCTTCACACTGGCCGTTTGTGTGACACACGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS TCA 72 bp | GCGCTGGATCTGCCTTGCAAAGTTGTTGCTAGAAGCTaGGCAAGGGAATTGGACTTCACTGTGCAGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ALDLPCKVVARS*ARELDFTVQGG Trigger: GCCACCCTGCACAGTGAAGTCCAATTCCCTTGCTCAGCTTCTAGCAACAACTTTGCAAGGCAGATCCAGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS CCA 72 bp | AATGATGTGGAGGGAATAGTCCTCAAGTGGGGACCGTaGATTGGGGGTCACCGACTCACTGTTCCGATACAC | + |
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Preference number: 6 (lower is better) Translates to: NDVEGIVLKWGP*IGGHRLTVPIH Trigger: GTGTATCGGAACAGTGAGTCGGTGACCCCCAATCCACGGTCCCCACTTGAGGACTATTCCCTCCACATCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CCA 72 bp | GTGAAGGTCAATGATGTGGAGGGAATAGTCCTCAAGTaGGGACCGTGGATTGGGGGTCACCGACTCACTGTT | + |
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Preference number: 6 (lower is better) Translates to: VKVNDVEGIVLK*GPWIGGHRLTV Trigger: AACAGTGAGTCGGTGACCCCCAATCCACGGTCCCCACTTGAGGACTATTCCCTCCACATCATTGACCTTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CCA 72 bp | GTCACTACGTCCTCGCTGGTGTACTTGATGAACAGATaGTTCTCGTCCAGGAGCTGCATCTTCCACATGCGC | + |
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Preference number: 6 (lower is better) Translates to: VTTSSLVYLMNR*FSSRSCIFHMR Trigger: GCGCATGTGGAAGATGCAGCTCCTGGACGAGAACCATCTGTTCATCAAGTACACCAGCGAGGACGTAGTGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CAA 72 bp | GTGAAGAGGCTACACTCCCGGTTCAAGTGCTCGCCATaGGCCGCCACGTTGGTAATGTGCAGCAGAACAAAA | + |
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Preference number: 6 (lower is better) Translates to: VKRLHSRFKCSP*AATLVMCSRTK Trigger: TTTTGTTCTGCTGCACATTACCAACGTGGCGGCCAATGGCGAGCACTTGAACCGGGAGTGTAGCCTCTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CAA 72 bp | GAGCAAGGGAATTGGACTTCACTGTGCAGGGTGGCGTaGCGGAAGAGGTCACAGAAGTTCTCGAAGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: EQGNWTSLCRVA*RKRSQKFSKSS Trigger: GGAACTCTTCGAGAACTTCTGTGACCTCTTCCGCAACGCCACCCTGCACAGTGAAGTCCAATTCCCTTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS TCA 72 bp | CGGGTGATCTCCACAAGTCTTGGGTCGCTCCATGACTaGCACCCACTTGTCATCGTAGCTGAAGAGAGACAA | + |
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Preference number: 6 (lower is better) Translates to: RVISTSLGSLHD*HPLVIVAEERQ Trigger: TTGTCTCTCTTCAGCTACGATGACAAGTGGGTGTCAGTCATGGAGCGACCCAAGACTTGTGGAGATCACCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 ENSMUST00000138062.3 |
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| CDS GCA 72 bp | GATCTCCCCTTCGTATCCCTGCAAGAGGTCCTCTGCTaGCTGACAGCCCTGGTACTCATAGATTTCAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: DLPFVSLQEVLC*LTALVLIDFKR Trigger: TCTCTTGAAATCTATGAGTACCAGGGCTGTCAGGCAGCAGAGGACCTCTTGCAGGGATACGAAGGGGAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS GCA 72 bp | CAAGATCTCCCCTTCGTATCCCTGCAAGAGGTCCTCTaGTGCCTGACAGCCCTGGTACTCATAGATTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: QDLPFVSLQEVL*CLTALVLIDFK Trigger: CTTGAAATCTATGAGTACCAGGGCTGTCAGGCAGCAGAGGACCTCTTGCAGGGATACGAAGGGGAGATCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CCA 72 bp | AAGCTGAGCAAGGGAATTGGACTTCACTGTGCAGGGTaGCGTTGCGGAAGAGGTCACAGAAGTTCTCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: KLSKGIGLHCAG*RCGRGHRSSRR Trigger: TCTTCGAGAACTTCTGTGACCTCTTCCGCAACGCCACCCTGCACAGTGAAGTCCAATTCCCTTGCTCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS CCA 72 bp | CTTGTCATCGTAGCTGAAGAGAGACAAATCCAGGTATaGGCTCCCACTGTAAGACTGGGCACTGATGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LVIVAEERQIQV*APTVRLGTDGE Trigger: CTCCCCATCAGTGCCCAGTCTTACAGTGGGAGCCCATACCTGGATTTGTCTCTCTTCAGCTACGATGACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS CAA 90 bp | CCGTCAGGCGAGAATTTCCGTAAGAAACAAGGAGGCTTTTCGACGTaGACAACCGTGAAGTTGGGGAAGACGTTCTGGTGGAACACTCGG | + |
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Preference number: 6 (lower is better) Translates to: PSGENFRKKQGGFST*TTVKLGKTFWWNTR Trigger: CCGAGTGTTCCACCAGAACGTCTTCCCCAACTTCACGGTTGTCAACGTCGAAAAGCCTCCTTGTTTCTTACGGAAATTCTCGCCTGACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CAA 90 bp | CTAGAAGCTGAGCAAGGGAATTGGACTTCACTGTGCAGGGTGGCGTaGCGGAAGAGGTCACAGAAGTTCTCGAAGAGTTCCAGAAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LEAEQGNWTSLCRVA*RKRSQKFSKSSRSS Trigger: TGAGCTTCTGGAACTCTTCGAGAACTTCTGTGACCTCTTCCGCAACGCCACCCTGCACAGTGAAGTCCAATTCCCTTGCTCAGCTTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS CAA 90 bp | CCAGAAGCTCATCGGATGTGTTCTCAAACACGGCAATCACCTCTGTaGTCACCATGTTGTATACCACAAAGAAGGAGGCCTGAGACGGGT | + |
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Preference number: 6 (lower is better) Translates to: PEAHRMCSQTRQSPL*SPCCIPQRRRPETG Trigger: ACCCGTCTCAGGCCTCCTTCTTTGTGGTATACAACATGGTGACAACAGAGGTGATTGCCGTGTTTGAGAACACATCCGATGAGCTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CAA 90 bp | ATAATCGTGTCTTTGAACCGGCGCTGGATCTGCCTTGCAAAGTTGTaGCTAGAAGCTGAGCAAGGGAATTGGACTTCACTGTGCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: IIVSLNRRWICLAKL*LEAEQGNWTSLCRV Trigger: CACCCTGCACAGTGAAGTCCAATTCCCTTGCTCAGCTTCTAGCAACAACTTTGCAAGGCAGATCCAGCGCCGGTTCAAAGACACGATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS CAA 90 bp | TCGGATGTGTTCTCAAACACGGCAATCACCTCTGTTGTCACCATGTaGTATACCACAAAGAAGGAGGCCTGGCTGCAGTGGCAGCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: SDVFSNTAITSVVTM*YTTKKEAWLQWQLC Trigger: ACAAAGCTGCCACTGCAGCCAGGCCTCCTTCTTTGTGGTATACAACATGGTGACAACAGAGGTGATTGCCGTGTTTGAGAACACATCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107431.3 |
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| CDS CAA 90 bp | CCAGAAGCTCATCGGATGTGTTCTCAAACACGGCAATCACCTCTGTaGTCACCATGTTGTATACCACAAAGAAGGAGGCCTGGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: PEAHRMCSQTRQSPL*SPCCIPQRRRPGCS Trigger: ACTGCAGCCAGGCCTCCTTCTTTGTGGTATACAACATGGTGACAACAGAGGTGATTGCCGTGTTTGAGAACACATCCGATGAGCTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107431.3 |
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| CDS TCA 72 bp | GCCCTTGATTGTGCGACAAGACCACTTTGTCACACTTaGATGTGCGTGTGTCACACAAACGGCCAGTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: ALDCATRPLCHT*MCVCHTNGQCE Trigger: TTCACACTGGCCGTTTGTGTGACACACGCACATTCAAGTGTGACAAAGTGGTCTTGTCGCACAATCAAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS TCA 72 bp | CTGCAGTGGCAGCTTTGTAGGTTTTGTTTTCGGTGCTaGATAAGCTGCTTTCCACCACTGAGCCCTACGAAC | + |
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Preference number: 6 (lower is better) Translates to: LQWQLCRFCFRC*ISCFPPLSPTN Trigger: GTTCGTAGGGCTCAGTGGTGGAAAGCAGCTTATTCAGCACCGAAAACAAAACCTACAAAGCTGCCACTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107431.3 |
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| CDS GCA 72 bp | GCAGCAGTGTCGCATGTGGAAGTTGACAACATACTCTaGGTTAGTCCTCTGCACAGAAATGGCAAATGGCTC | + |
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Preference number: 6 (lower is better) Translates to: AAVSHVEVDNIL*VSPLHRNGKWL Trigger: GAGCCATTTGCCATTTCTGTGCAGAGGACTAACGCAGAGTATGTTGTCAACTTCCACATGCGACACTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS CAA 72 bp | TCTTTGAACCGGCGCTGGATCTGCCTTGCAAAGTTGTaGCTAGAAGCTGAGCAAGGGAATTGGACTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: SLNRRWICLAKL*LEAEQGNWTSL Trigger: CAGTGAAGTCCAATTCCCTTGCTCAGCTTCTAGCAACAACTTTGCAAGGCAGATCCAGCGCCGGTTCAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS CAA 72 bp | GTGTCTTTGAACCGGCGCTGGATCTGCCTTGCAAAGTaGTTGCTAGAAGCTGAGCAAGGGAATTGGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: VSLNRRWICLAK*LLEAEQGNWTS Trigger: TGAAGTCCAATTCCCTTGCTCAGCTTCTAGCAACAACTTTGCAAGGCAGATCCAGCGCCGGTTCAAAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS CAA 72 bp | TTCTCAAACACGGCAATCACCTCTGTTGTCACCATGTaGTATACCACAAAGAAGGAGGCCTGGCTGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: FSNTAITSVVTM*YTTKKEAWLQW Trigger: CCACTGCAGCCAGGCCTCCTTCTTTGTGGTATACAACATGGTGACAACAGAGGTGATTGCCGTGTTTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107431.3 |
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| CDS GCA 72 bp | GCATTTATAATCGTGTCTTTGAACCGGCGCTGGATCTaGCTTGCAAAGTTGTTGCTAGAAGCTGAGCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: AFIIVSLNRRWI*LAKLLLEAEQG Trigger: CCCTTGCTCAGCTTCTAGCAACAACTTTGCAAGGCAGATCCAGCGCCGGTTCAAAGACACGATTATAAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS GCA 72 bp | TCACCATGTTGTATACCACAAAGAAGGAGGCCTGGCTaGAGTGGCAGCTTTGTAGGTTTTGTTTTCGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPCCIPQRRRPG*SGSFVGFVFGA Trigger: AGCACCGAAAACAAAACCTACAAAGCTGCCACTGCAGCCAGGCCTCCTTCTTTGTGGTATACAACATGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107431.3 |
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| CDS CAA 90 bp | TTTATAATCGTGTCTTTGAACCGGCGCTGGATCTGCCTTGCAAAGTaGTTGCTAGAAGCTGAGCAAGGGAATTGGACTTCACTGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: FIIVSLNRRWICLAK*LLEAEQGNWTSLCR Trigger: CCTGCACAGTGAAGTCCAATTCCCTTGCTCAGCTTCTAGCAACAACTTTGCAAGGCAGATCCAGCGCCGGTTCAAAGACACGATTATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032839.13 ENSMUST00000107431.3 |
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| CDS TCA 72 bp | CTGGTACTCATAGATTTCAAGAGATGTCTGGTCAGATaGAAAGGCAATAAAGTAGCGCCCGTCAGGCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: LVLIDFKRCLVR*KGNKVAPVRRE Trigger: TTCTCGCCTGACGGGCGCTACTTTATTGCCTTTTCATCTGACCAGACATCTCTTGAAATCTATGAGTACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CAA 72 bp | GCGCCGGCGTTCGAGGCGGTGAATGACATTTTGATTTaGGATTCTTCGAGGTTTAATTGTGGAAACATGATG | + |
|
Preference number: 6 (lower is better) Translates to: APAFEAVNDILI*DSSRFNCGNMM Trigger: CATCATGTTTCCACAATTAAACCTCGAAGAATCCAAAATCAAAATGTCATTCACCGCCTCGAACGCCGGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CAA 90 bp | CTGCACAGACAATATGGCCAGGATGTTTTTATACAAGTAGAGCCCTaGATTGTGCGACAAGACCACTTTGTCACACTTGAATGTGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LHRQYGQDVFIQVEP*IVRQDHFVTLECAC Trigger: ACACGCACATTCAAGTGTGACAAAGTGGTCTTGTCGCACAATCAAGGGCTCTACTTGTATAAAAACATCCTGGCCATATTGTCTGTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CCA 72 bp | GGAAGACATGAATCGTCTGCTGCTGCACAGACAATATaGCCAGGATGTTTTTATACAAGTAGAGCCCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GRHESSAAAQTI*PGCFYTSRALD Trigger: ATCAAGGGCTCTACTTGTATAAAAACATCCTGGCCATATTGTCTGTGCAGCAGCAGACGATTCATGTCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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| CDS CAA 72 bp | CAATATGGCCAGGATGTTTTTATACAAGTAGAGCCCTaGATTGTGCGACAAGACCACTTTGTCACACTTGAA | + |
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Preference number: 6 (lower is better) Translates to: QYGQDVFIQVEP*IVRQDHFVTLE Trigger: TTCAAGTGTGACAAAGTGGTCTTGTCGCACAATCAAGGGCTCTACTTGTATAAAAACATCCTGGCCATATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032839.13 |
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