Pregenerated sensors for DESI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026502Ensembl transcript IDs: ENSMUST00000027783.14, ENSMUST00000069568.4, ENSMUST00000161075.8
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAACCGCTGAAAGGAGATGGGGAAAGCCTTCCAGTCAGCACAGTTTaGCTCCGTTCCCCAGAAATCTGGGCTGCTACTTGTCGCTTGTGC | + |
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Preference number: 1 (lower is better) Translates to: QPLKGDGESLPVSTV*LRSPEIWAATCRLC Trigger: GCACAAGCGACAAGTAGCAGCCCAGATTTCTGGGGAACGGAGGCAAACTGTGCTGACTGGAAGGCTTTCCCCATCTCCTTTCAGCGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR GCA 90 bp | GTGAGGGCTGGGGAAGGGCTTGGTGATGGCAGCCTAAGTATCCCTTaGCTTAACAGCATGGGTGGGAGTCACTTCCAACTGCCATTCTCA | + |
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Preference number: 1 (lower is better) Translates to: VRAGEGLGDGSLSIP*LNSMGGSHFQLPFS Trigger: TGAGAATGGCAGTTGGAAGTGACTCCCACCCATGCTGTTAAGGCAAGGGATACTTAGGCTGCCATCACCAAGCCCTTCCCCAGCCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CCA 90 bp | CAAAAACCCAAGTCAACTGTACCAAGCATCTCTTTCTTACCAAGCTaGGCTGAGGGCTTGGGCTCTCGTGGTGACACCTCTTGGGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: QKPKSTVPSISFLPS*AEGLGSRGDTSWGA Trigger: TGCTCCCCAAGAGGTGTCACCACGAGAGCCCAAGCCCTCAGCCCAGCTTGGTAAGAAAGAGATGCTTGGTACAGTTGACTTGGGTTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CCA 90 bp | GCTGGTGATGGTAGGTATGCTATTGCTGTGAAGCAGAGCAATAGTTaGCCGGAGTTCAGGCCTGGAGGTGCTCTAGGACAGTCACCACTT | + |
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Preference number: 1 (lower is better) Translates to: AGDGRYAIAVKQSNS*PEFRPGGALGQSPL Trigger: AAGTGGTGACTGTCCTAGAGCACCTCCAGGCCTGAACTCCGGCCAACTATTGCTCTGCTTCACAGCAATAGCATACCTACCATCACCAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | CCAAGCCCTCCAGCTTACATAGGGCCTAAAGGTGGCCTGAGGGTTTaGGAAGCAGATGAGGACTGTACTGACAATAAATCCCACTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: PSPPAYIGPKGGLRV*EADEDCTDNKSHCL Trigger: CAGGCAGTGGGATTTATTGTCAGTACAGTCCTCATCTGCTTCTCAAACCCTCAGGCCACCTTTAGGCCCTATGTAAGCTGGAGGGCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR GCA 90 bp | GTCAGAGGGGACAGTAATCATGAACATCTAGCAAATAAGGCTATGTaGAGGGTCCCTGGGGATGGTGGCCTGAGCAGTTTGGGTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: VRGDSNHEHLANKAM*RVPGDGGLSSLGLQ Trigger: CTGAAGACCCAAACTGCTCAGGCCACCATCCCCAGGGACCCTGCACATAGCCTTATTTGCTAGATGTTCATGATTACTGTCCCCTCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CCA 90 bp | AAGGTGACGGACAATGTCTTCCTTCCTTCAACTGGAGGTTCTCTGTaGATCAGAGTGAGTGCTTTCCATGTGAGGGCTGGGGAAGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: KVTDNVFLPSTGGSL*IRVSAFHVRAGEGL Trigger: AAGCCCTTCCCCAGCCCTCACATGGAAAGCACTCACTCTGATCCACAGAGAACCTCCAGTTGAAGGAAGGAAGACATTGTCCGTCACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CCA 90 bp | AGCTGTAGAGGAAGAGCAGAAGAGTGTGAAGTAGCAAGTGGCACCTaGCAGGGCTGGAGATTGGTAGTGGAGAAATGTCGGAAGCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: SCRGRAEECEVASGT*QGWRLVVEKCRKQQ Trigger: TTGCTGCTTCCGACATTTCTCCACTACCAATCTCCAGCCCTGCCAGGTGCCACTTGCTACTTCACACTCTTCTGCTCTTCCTCTACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CCA 90 bp | TGCCAAGATGGCAGAGGCAAATGGCACCCACCATCTTCGTGGATGTaGTCACTGGGAATGAGAACAGGAAAAAGCTGTAGAGGAAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: CQDGRGKWHPPSSWM*SLGMRTGKSCRGRA Trigger: TGCTCTTCCTCTACAGCTTTTTCCTGTTCTCATTCCCAGTGACCACATCCACGAAGATGGTGGGTGCCATTTGCCTCTGCCATCTTGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | TCAGGAAATCCTCCTTCCAACTCTACTGATTTTGAGGGGAACCGATaGCCAAATCCTTCAGTGGTTCACCTCTCCAGGCTGTGGGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: SGNPPSNSTDFEGNR*PNPSVVHLSRLWAE Trigger: TTCTGCCCACAGCCTGGAGAGGTGAACCACTGAAGGATTTGGTCATCGGTTCCCCTCAAAATCAGTAGAGTTGGAAGGAGGATTTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | AGATCCCATGAGCTCTCTGCTGACGGGAAAGAGGGAATGGGCTGTTaGGGAGCATGGGAAATAATTGTTAGTGATAAAGCCTGGAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: RSHELSADGKEGMGC*GAWEIIVSDKAWRG Trigger: ACCTCTCCAGGCTTTATCACTAACAATTATTTCCCATGCTCCTCAACAGCCCATTCCCTCTTTCCCGTCAGCAGAGAGCTCATGGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CCA 90 bp | GGCTGGAGATTGGTAGTGGAGAAATGTCGGAAGCAGCAATGGAAATaGAGAACACAAAGGTTCAGAGGACTTCTCAAGACACAGGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: GWRLVVEKCRKQQWK*RTQRFRGLLKTQGV Trigger: CACACCCTGTGTCTTGAGAAGTCCTCTGAACCTTTGTGTTCTCCATTTCCATTGCTGCTTCCGACATTTCTCCACTACCAATCTCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CCA 90 bp | TGGCAGGGCTGGAGATTGGTAGTGGAGAAATGTCGGAAGCAGCAATaGAAATGGAGAACACAAAGGTTCAGAGGACTTCTCAAGACACAG | + |
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Preference number: 1 (lower is better) Translates to: WQGWRLVVEKCRKQQ*KWRTQRFRGLLKTQ Trigger: CTGTGTCTTGAGAAGTCCTCTGAACCTTTGTGTTCTCCATTTCCATTGCTGCTTCCGACATTTCTCCACTACCAATCTCCAGCCCTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | TCAAATGTCCCAGTCAGGCATGAGAACAGCAAGTCACTTGTGTGCTaGGCTGCTGAAATGAGGGTAAGCACAGAGATGTACCTGGCTATT | + |
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Preference number: 1 (lower is better) Translates to: SNVPVRHENSKSLVC*AAEMRVSTEMYLAI Trigger: AATAGCCAGGTACATCTCTGTGCTTACCCTCATTTCAGCAGCTCAGCACACAAGTGACTTGCTGTTCTCATGCCTGACTGGGACATTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | TCCTTCCAACCTCAGGGACACCAAAGTGCAAGGAATCTTGTGTCCTaGCTCTCAGGTGACCTGCACATGAGCTGTTTATTTCCTAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: SFQPQGHQSARNLVS*LSGDLHMSCLFPRR Trigger: TCTTCTAGGAAATAAACAGCTCATGTGCAGGTCACCTGAGAGTCAGGACACAAGATTCCTTGCACTTTGGTGTCCCTGAGGTTGGAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR GCA 90 bp | ATGATGGAAGAAGCCATGGAAACAGAGTCCTGCAGCTGTCTGCAGTaGTTAATCTACACACACACACACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: MMEEAMETESCSCLQ*LIYTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGATTAAGCACTGCAGACAGCTGCAGGACTCTGTTTCCATGGCTTCTTCCATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | GTGAGTTGGGGTAAGCCTAAAGTTAATGGCCAGAAATGCTTGGAATaGAGATTGCAGAAGTGGCCAGACATGGTGGCGCATGCCTTTAAT | + |
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Preference number: 1 (lower is better) Translates to: VSWGKPKVNGQKCLE*RLQKWPDMVAHAFN Trigger: ATTAAAGGCATGCGCCACCATGTCTGGCCACTTCTGCAATCTTCATTCCAAGCATTTCTGGCCATTAACTTTAGGCTTACCCCAACTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CCA 90 bp | CTTAAATTAGTGGAGGTAAATACTGAGCTAGGTACAAAGGGCCAATaGAGGAGAAAGGCAAAGGTTCAGGTTGGAGGTGCAGCAGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: LKLVEVNTELGTKGQ*RRKAKVQVGGAAEV Trigger: AACCTCTGCTGCACCTCCAACCTGAACCTTTGCCTTTCTCCTCCATTGGCCCTTTGTACCTAGCTCAGTATTTACCTCCACTAATTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CCA 90 bp | AGCAGTTTGGGTCTTCAGTTGATGACAGACTTATACATGGAAGGTTaGTTGATGGACCTCTTCTTGACAGCTCTTGTGGCAAGGTGGTTC | + |
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Preference number: 1 (lower is better) Translates to: SSLGLQLMTDLYMEG*LMDLFLTALVARWF Trigger: GAACCACCTTGCCACAAGAGCTGTCAAGAAGAGGTCCATCAACCAACCTTCCATGTATAAGTCTGTCATCAACTGAAGACCCAAACTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CCA 90 bp | TCAGAGGACTTCTCAAGACACAGGGTGTGGTGGAGAGATGCTTCTTaGAAAGTGTCAGGTACTAAAGCATTTTTGCCTGCCACATTGGAA | + |
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Preference number: 1 (lower is better) Translates to: SEDFSRHRVWWRDAS*KVSGTKAFLPATLE Trigger: TTCCAATGTGGCAGGCAAAAATGCTTTAGTACCTGACACTTTCCAAGAAGCATCTCTCCACCACACCCTGTGTCTTGAGAAGTCCTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR GCA 90 bp | AGAGGAAGGCCTTTTCTACCTTTCCTTATGGCCAAGTCTGTGGTCTaGTTCCCTAAAGAATATTCCAGCTTTGCCATTGCAAAGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: RGRPFLPFLMAKSVV*FPKEYSSFAIAKFQ Trigger: CTGGAACTTTGCAATGGCAAAGCTGGAATATTCTTTAGGGAAGCAGACCACAGACTTGGCCATAAGGAAAGGTAGAAAAGGCCTTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | AAGCAGATGAGGACTGTACTGACAATAAATCCCACTGCCTGTCTGTaGTTTTGGGATGTGAGAGAAAACAAGGTGACGGACAATGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: KQMRTVLTINPTACL*FWDVRENKVTDNVF Trigger: GAAGACATTGTCCGTCACCTTGTTTTCTCTCACATCCCAAAATCACAGACAGGCAGTGGGATTTATTGTCAGTACAGTCCTCATCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CCA 90 bp | AAGAGTAATTATTGTTTGAGTAAGGGAAACAGTGAATACAAGACATaGTACAGACGGGGCTGGCCACATTCCTGCAGAGCAGATCGAACT | + |
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Preference number: 1 (lower is better) Translates to: KSNYCLSKGNSEYKT*YRRGWPHSCRADRT Trigger: AGTTCGATCTGCTCTGCAGGAATGTGGCCAGCCCCGTCTGTACCATGTCTTGTATTCACTGTTTCCCTTACTCAAACAATAATTACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | CACTTGTTGACAGTGGAGATGTGTGTGAATAGACTGAGCAGACAATaGAAGTCTAACAATCAAGCTACACTCTCAAACCATACCGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: HLLTVEMCVNRLSRQ*KSNNQATLSNHTGK Trigger: CTTGCCGGTATGGTTTGAGAGTGTAGCTTGATTGTTAGACTTTCATTGTCTGCTCAGTCTATTCACACACATCTCCACTGTCAACAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | TTTGTTATTCACACCACATGTATATTTAGAACAGTCAAGCTGCTTTaGGGACAAGTCTGGCTTAGCAATCTGGGCAACCATACCCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: FVIHTTCIFRTVKLL*GQVWLSNLGNHTQA Trigger: GGCTTGGGTATGGTTGCCCAGATTGCTAAGCCAGACTTGTCCTCAAAGCAGCTTGACTGTTCTAAATATACATGTGGTGTGAATAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | ATTGATGTGACATCTTTTACTGAGGTGTCAAGTGAGGGTCTTAACTaGGGTATATGTGGGAAGCTGACTTCTAAGGGACCAAGAATAGAC | + |
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Preference number: 1 (lower is better) Translates to: IDVTSFTEVSSEGLN*GICGKLTSKGPRID Trigger: GTCTATTCTTGGTCCCTTAGAAGTCAGCTTCCCACATATACCTCAGTTAAGACCCTCACTTGACACCTCAGTAAAAGATGTCACATCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | AAAGTGCAAGGAATCTTGTGTCCTGACTCTCAGGTGACCTGCACATaGGCTGTTTATTTCCTAGAAGACTTTTACATTTCTTCAAACGTC | + |
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Preference number: 1 (lower is better) Translates to: KVQGILCPDSQVTCT*AVYFLEDFYISSNV Trigger: GACGTTTGAAGAAATGTAAAAGTCTTCTAGGAAATAAACAGCTCATGTGCAGGTCACCTGAGAGTCAGGACACAAGATTCCTTGCACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR GCA 90 bp | TATGCTGTAGCTCTGGCAACTGTCAGGAAGTGTACAAAGATCATCTaGCTAATATTTGAAGATGAGGATATTCTTCTTTCATGGTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: YAVALATVRKCTKII*LIFEDEDILLSWWQ Trigger: CTGCCACCATGAAAGAAGAATATCCTCATCTTCAAATATTAGGCAGATGATCTTTGTACACTTCCTGACAGTTGCCAGAGCTACAGCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR GCA 90 bp | CTTAATTTGTTATTCACACCACATGTATATTTAGAACAGTCAAGCTaGTTTGAGGACAAGTCTGGCTTAGCAATCTGGGCAACCATACCC | + |
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Preference number: 1 (lower is better) Translates to: LNLLFTPHVYLEQSS*FEDKSGLAIWATIP Trigger: GGGTATGGTTGCCCAGATTGCTAAGCCAGACTTGTCCTCAAAGCAGCTTGACTGTTCTAAATATACATGTGGTGTGAATAACAAATTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CCA 90 bp | TTAAACACACATCAGCAGCCAGACTCTGATAGGCTAGATCCCATTTaGGCTAGCTTGCCAGAAAATTTTAATAAAGGGATATTGAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: LNTHQQPDSDRLDPI*ASLPENFNKGILKW Trigger: CCACTTCAATATCCCTTTATTAAAATTTTCTGGCAAGCTAGCCCAAATGGGATCTAGCCTATCAGAGTCTGGCTGCTGATGTGTGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | AGGACAGTTATGGGGAAACCTTGTCTTGAAATAACAAACAAATTCTaGAGTGGTCTAGTAATAGGTCTAAGGTCTAAGACTGGGACAATG | + |
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Preference number: 1 (lower is better) Translates to: RTVMGKPCLEITNKF*SGLVIGLRSKTGTM Trigger: CATTGTCCCAGTCTTAGACCTTAGACCTATTACTAGACCACTTCAGAATTTGTTTGTTATTTCAAGACAAGGTTTCCCCATAACTGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR TCA 90 bp | GGTCTACAAAGTGAGTTCCAGGACAGTTATGGGGAAACCTTGTCTTaGAATAACAAACAAATTCTGAAGTGGTCTAGTAATAGGTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: GLQSEFQDSYGETLS*NNKQILKWSSNRSK Trigger: CTTAGACCTATTACTAGACCACTTCAGAATTTGTTTGTTATTTCAAGACAAGGTTTCCCCATAACTGTCCTGGAACTCACTTTGTAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CAA 90 bp | TCAACCGCTGAAAGGAGATGGGGAAAGCCTTCCAGTCAGCACAGTTaGCCTCCGTTCCCCAGAAATCTGGGCTGCTACTTGTCGCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: STAERRWGKPSSQHS*PPFPRNLGCYLSLV Trigger: CACAAGCGACAAGTAGCAGCCCAGATTTCTGGGGAACGGAGGCAAACTGTGCTGACTGGAAGGCTTTCCCCATCTCCTTTCAGCGGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR-3UTR TCA 90 bp | AGGGTGTGGAGAGGAACTGACCAGGACCCAAGCCCTCTGGCTGTGTGTGTGCTCAATATAATCCTGAGCTaGAAAACTGGGATTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: RVWRGTDQDPSPLAVCVLNIILS*KTGIWG Trigger: CCCCCAAATCCCAGTTTTTCAGCTCAGGATTATATT...GAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGGAGAGGAACTGACCAGGACCCAAGCCCTCTGGCTGTGTGTGTGCTCCTTGGTGGCAGAAGTCCATaGAAGATTTGTAAACAGTGG | + |
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Preference number: 2 (lower is better) Translates to: VWRGTDQDPSPLAVCVLLGGRSP*KICKQW Trigger: CCACTGTTTACAAATCTTGCATGGACTTCTGCCACC...AAGGAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR CAA 90 bp | TGCAGGGTCCCTGGGGATGGTGGCCTGAGCAGTTTGGGTCTTCAGTaGATGACAGACTTATACATGGAAGGTTGGTTGATGGACCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: CRVPGDGGLSSLGLQ*MTDLYMEGWLMDLF Trigger: GAAGAGGTCCATCAACCAACCTTCCATGTATAAGTCTGTCATCAACTGAAGACCCAAACTGCTCAGGCCACCATCCCCAGGGACCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGCTCCTTCATGTCAGGCCAGTTTGGATTCCGGTATCTGGGTGCCAACATTGCCAGAGACAGTTCTaGAGGCCTGACTTCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: CVLLHVRPVWIPVSGCQHCQRQF*RPDFRG Trigger: ACCTCTGAAGTCAGGCCTTCAGAACTGTCTCTGGCA...ATGTTGGCACCCAGATACCGGAATCCAAACTGGCCTGACATGAAGGAGCACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGTGTGGAGAGGAACTGACCAGGACCCAAGCCCTCTGGCTGTGTGTGTGCTCATTCTTCTTTCATGGTaGCAGAAGTCCATGCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: RVWRGTDQDPSPLAVCVLILLSW*QKSMQD Trigger: ATCTTGCATGGACTTCTGCCACCATGAAAGAAGAAT...GAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR CAA 90 bp | TCAACTGTACCAAGCATCTCTTTCTTACCAAGCTGGGCTGAGGGCTaGGGCTCTCGTGGTGACACCTCTTGGGGAGCATTAGTGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: STVPSISFLPSWAEG*GSRGDTSWGALVFC Trigger: ACAAAACACTAATGCTCCCCAAGAGGTGTCACCACGAGAGCCCAAGCCCTCAGCCCAGCTTGGTAAGAAAGAGATGCTTGGTACAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR-3UTR CCA 90 bp | AGCAGATCGAACTCTTGGATTGTACAAATAACCCCTTCCCAGCACAAAATACAGGCTGGGCTGAGGGCTTaGGCTCTCGTGGTGACACCT | + |
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Preference number: 2 (lower is better) Translates to: SRSNSWIVQITPSQHKIQAGLRA*ALVVTP Trigger: AGGTGTCACCACGAGAGCCCAAGCCCTCAGCCCAGC...CTGTATTTTGTGCTGGGAAGGGGTTATTTGTACAATCCAAGAGTTCGATCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR-3UTR CCA 90 bp | CAAATGTCCACCAAAGGGGAAGGGTGTAAACAGAACCATGGCATCTGTAGAATATATGTGCAGGGTCCCTaGGGATGGTGGCCTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QMSTKGEGCKQNHGICRIYVQGP*GWWPEQ Trigger: CTGCTCAGGCCACCATCCCCAGGGACCCTGCACATA...TATTCTACAGATGCCATGGTTCTGTTTACACCCTTCCCCTTTGGTGGACATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGCAACCATTCAAATGTCCACCAAAGGGGAAGGGTGTAAACAGAACCATGCTGAGTAGGAGGTGCTaGCAAGGTGCCAAGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: ELQPFKCPPKGKGVNRTMLSRRC*QGAKMA Trigger: TGCCATCTTGGCACCTTGCCAGCACCTCCTACTCAG...CATGGTTCTGTTTACACCCTTCCCCTTTGGTGGACATTTGAATGGTTGCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CAA 90 bp | CCCAAGCCCTCTGGCTGTGTGTGTGCTCCTTCATGTCAGGCCAGTTaGGATTCCGGTATCTGGGTGCCAACATTGGTAACAAAACAAATA | + |
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Preference number: 2 (lower is better) Translates to: PKPSGCVCAPSCQAS*DSGIWVPTLVTKQI Trigger: TATTTGTTTTGTTACCAATGTTGGCACCCAGATACCGGAATCCAAACTGGCCTGACATGAAGGAGCACACACACAGCCAGAGGGCTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR CAA 90 bp | AATAAGGCTATGTGCAGGGTCCCTGGGGATGGTGGCCTGAGCAGTTaGGGTCTTCAGTTGATGACAGACTTATACATGGAAGGTTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: NKAMCRVPGDGGLSS*GLQLMTDLYMEGWL Trigger: CAACCAACCTTCCATGTATAAGTCTGTCATCAACTGAAGACCCAAACTGCTCAGGCCACCATCCCCAGGGACCCTGCACATAGCCTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR-3UTR TCA 90 bp | TCAAGCCAATGCAAGCAGCATCAGCGTTATCTAGGAAATCTGTGTGATTTCAGGCACAGGCTCAACCGCTaGAAGGAGATGGGGAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SSQCKQHQRYLGNLCDFRHRLNR*KEMGKA Trigger: GGCTTTCCCCATCTCCTTTCAGCGGTTGAGCCTGTG...CCTGAAATCACACAGATTTCCTAGATAACGCTGATGCTGCTTGCATTGGCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGCAACCATTCAAATGTCCACCAAAGGGGAAGGGTGTAAACAGAACCATGCATGTCAGGCCAGTTTaGATTCCGGTATCTGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: ELQPFKCPPKGKGVNRTMHVRPV*IPVSGC Trigger: GCACCCAGATACCGGAATCCAAACTGGCCTGACATG...CATGGTTCTGTTTACACCCTTCCCCTTTGGTGGACATTTGAATGGTTGCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGCCAATGCAAGCAGCATCAGCGTTATCTAGGAAATCTGTGTGATTTCAGGAGGACCCAAGCCCTCTaGCTGTGTGTGTGCTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SSQCKQHQRYLGNLCDFRRTQAL*LCVCSF Trigger: GAAGGAGCACACACACAGCCAGAGGGCTTGGGTCCT...CCTGAAATCACACAGATTTCCTAGATAACGCTGATGCTGCTTGCATTGGCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAATGCAAGCAGCATCAGCGTTATCTAGGAAATCTGTGTGATTTCAGGCGATGCCAGAGACAGTTCTaGAGGCCTGACTTCAGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: SQCKQHQRYLGNLCDFRRCQRQF*RPDFRG Trigger: ACCTCTGAAGTCAGGCCTTCAGAACTGTCTCTGGCA...TCGCCTGAAATCACACAGATTTCCTAGATAACGCTGATGCTGCTTGCATTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CAA 90 bp | CCTTCATGTCAGGCCAGTTTGGATTCCGGTATCTGGGTGCCAACATaGGTAACAAAACAAATACAGATCTCCGGGACAGCTTGTAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PSCQASLDSGIWVPT*VTKQIQISGTACKQ Trigger: CTGCTTACAAGCTGTCCCGGAGATCTGTATTTGTTTTGTTACCAATGTTGGCACCCAGATACCGGAATCCAAACTGGCCTGACATGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCTGCAACCATTCAAATGTCCACCAAAGGGGAAGGGTGTAAACAGAACCATGGGTATGCTATTGCTGTaGAGCAGAGCAATAGTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: ELQPFKCPPKGKGVNRTMGMLLL*SRAIVG Trigger: GCCAACTATTGCTCTGCTTCACAGCAATAGCATACC...CATGGTTCTGTTTACACCCTTCCCCTTTGGTGGACATTTGAATGGTTGCAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR GCA 90 bp | GAAACAGAGTCCTGCAGCTGTCTGCAGTGCTTAATCTACACACACACACACACAACGGGTAGAGTAACTTaGAGCAGCTTTCTTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ETESCSCLQCLIYTHTHTTGRVT*SSFLLW Trigger: CCAGAGAAGAAAGCTGCTGCAAGTTACTCTACCCGT...TGTGTGTGTGTGTGTGTAGATTAAGCACTGCAGACAGCTGCAGGACTCTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CAA 90 bp | TCTCTCCCTAACTTTTCAAACAGTGCTGGGATGGAACTCTGGGTTTaGCATACACTAGTCACTTGTTACACCAGGACCTACACTCCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SLPNFSNSAGMELWV*HTLVTCYTRTYTPS Trigger: ACTGGGAGTGTAGGTCCTGGTGTAACAAGTGACTAGTGTATGCAAAACCCAGAGTTCCATCCCAGCACTGTTTGAAAAGTTAGGGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR GCA 90 bp | GCTTGTACTGCTGCTCAGGAAGCTAGGTTAGGATACTCCCACCCCACCAAAATAGGGGAGAGCCATCTTTaGATACAAAATATCCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ACTAAQEARLGYSHPTKIGESHL*IQNIQR Trigger: CCTTTGGATATTTTGTATGCAAAGATGGCTCTCCCC...TATTTTGGTGGGGTGGGAGTATCCTAACCTAGCTTCCTGAGCAGCAGTACAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAACAGAGTCCTGCAGCTGTCTGCAGTGCTTAATCTACACACACACACACACAGCACCTTGGGAAATGTaGTACTCAGAATGGGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: ETESCSCLQCLIYTHTHTAPWEM*YSEWEE Trigger: TTCTTCCCATTCTGAGTAGCACATTTCCCAAGGTGC...TGTGTGTGTGTGTGTGTAGATTAAGCACTGCAGACAGCTGCAGGACTCTGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CAA 90 bp | GATGAGGACTGTACTGACAATAAATCCCACTGCCTGTCTGTGATTTaGGGATGTGAGAGAAAACAAGGTGACGGACAATGTCTTCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: DEDCTDNKSHCLSVI*GCERKQGDGQCLPS Trigger: GGAAGGAAGACATTGTCCGTCACCTTGTTTTCTCTCACATCCCAAAATCACAGACAGGCAGTGGGATTTATTGTCAGTACAGTCCTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CAA 90 bp | TTATGGCCAAGTCTGTGGTCTGCTTCCCTAAAGAATATTCCAGCTTaGCCATTGCAAAGTTCCAGCCCATTTCTGAAGGATGACTACAGG | + |
|
Preference number: 2 (lower is better) Translates to: LWPSLWSASLKNIPA*PLQSSSPFLKDDYR Trigger: CCTGTAGTCATCCTTCAGAAATGGGCTGGAACTTTGCAATGGCAAAGCTGGAATATTCTTTAGGGAAGCAGACCACAGACTTGGCCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CAA 90 bp | AGTTTGGGTCTTCAGTTGATGACAGACTTATACATGGAAGGTTGGTaGATGGACCTCTTCTTGACAGCTCTTGTGGCAAGGTGGTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: SLGLQLMTDLYMEGW*MDLFLTALVARWFL Trigger: CAAGAACCACCTTGCCACAAGAGCTGTCAAGAAGAGGTCCATCAACCAACCTTCCATGTATAAGTCTGTCATCAACTGAAGACCCAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CAA 90 bp | CATCAGCAGCCAGACTCTGATAGGCTAGATCCCATTTGGGCTAGCTaGCCAGAAAATTTTAATAAAGGGATATTGAAGTGGCAGAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: HQQPDSDRLDPIWAS*PENFNKGILKWQRH Trigger: GTGTCTCTGCCACTTCAATATCCCTTTATTAAAATTTTCTGGCAAGCTAGCCCAAATGGGATCTAGCCTATCAGAGTCTGGCTGCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR TCA 90 bp | TCAAGCCAATGCAAGCAGCATCAGCGTTATCTAGGAAATCTGTGTGATTTCAGGTCCATGAAGATTTGTTaGCAGCTGTCCCACTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: SSQCKQHQRYLGNLCDFRSMKIC*QLSHLL Trigger: CAACAAGTGGGACAGCTGTCAACAAATCTTCATGGA...CCTGAAATCACACAGATTTCCTAGATAACGCTGATGCTGCTTGCATTGGCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAATGCAAGCAGCATCAGCGTTATCTAGGAAATCTGTGTGATTTCAGGCGAGTTTGTGTTTTGTTTTaGACTTGTTGGGAGCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: SQCKQHQRYLGNLCDFRRVCVLF*TCWEPH Trigger: GTGTGGCTCCCAACAAGTTCAAAACAAAACACAAAC...TCGCCTGAAATCACACAGATTTCCTAGATAACGCTGATGCTGCTTGCATTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGAAATTTACTCAAAGACATGTATCTTCACACAGAGAATGTGACTCTCACAGCAGCGATGAGGACTaGGGCTGTGGAAGCCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KMKFTQRHVSSHRECDSHSSDED*GCGSLS Trigger: GGAAAGGCTTCCACAGCCGCAGTCCTCATCGCTGCT...GTGAGAGTCACATTCTCTGTGTGAAGATACATGTCTTTGAGTAAATTTCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGATCGAACTCTTGGATTGTACAAATAACCCCTTCCCAGCACAAAATACAGATGGAAACAGAGTCCTaGAGCTGTCTGCAGTGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: SRSNSWIVQITPSQHKIQMETES*SCLQCL Trigger: TAAGCACTGCAGACAGCTGCAGGACTCTGTTTCCAT...CTGTATTTTGTGCTGGGAAGGGGTTATTTGTACAATCCAAGAGTTCGATCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTGCAACCATTCAAATGTCCACCAAAGGGGAAGGGTGTAAACAGAACCATGCTACTATTTGAGTGGTaGGTACAGGATGCTATTCAT | + |
|
Preference number: 2 (lower is better) Translates to: ELQPFKCPPKGKGVNRTMLLFEW*VQDAIH Trigger: ATGAATAGCATCCTGTACCCACCACTCAAATAGTAG...CATGGTTCTGTTTACACCCTTCCCCTTTGGTGGACATTTGAATGGTTGCAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000069568.4 |
||
| 3UTR CAA 90 bp | AATCCATTAAAAACTCAGGAAATCCTCCTTCCAACTCTACTGATTTaGAGGGGAACCGATGACCAAATCCTTCAGTGGTTCACCTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: NPLKTQEILLPTLLI*RGTDDQILQWFTSP Trigger: TGGAGAGGTGAACCACTGAAGGATTTGGTCATCGGTTCCCCTCAAAATCAGTAGAGTTGGAAGGAGGATTTCCTGAGTTTTTAATGGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR TCA 90 bp | GAGAATGTGACTCTCACACTAATCACGTATCTAAAGCTGCAGTCAGTACCTTGGAATATAATCCTGAGCTaGAAAACTGGGATTTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: ENVTLTLITYLKLQSVPWNIILS*KTGIWG Trigger: CCCCCAAATCCCAGTTTTTCAGCTCAGGATTATATT...CCAAGGTACTGACTGCAGCTTTAGATACGTGATTAGTGTGAGAGTCACATTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR-3UTR GCA 90 bp | GTATCTTCATTAAAGAATCAGAGGCATCAAGCCAGGCAGATACAAGAGTACCACGGTGGCAGAAGTCCATaGAAGATTTGTAAACAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VSSLKNQRHQARQIQEYHGGRSP*KICKQW Trigger: CCACTGTTTACAAATCTTGCATGGACTTCTGCCACC...GTGGTACTCTTGTATCTGCCTGGCTTGATGCCTCTGATTCTTTAATGAAGATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCTAGAGAGATTCTCAAAGCACAGACACACCTTACAGTGTTCACAAAGTACGGGGAGAGCCATCTTTaGATACAAAATATCCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VPREILKAQTHLTVFTKYGESHL*IQNIQR Trigger: CCTTTGGATATTTTGTATGCAAAGATGGCTCTCCCC...GTACTTTGTGAACACTGTAAGGTGTGTCTGTGCTTTGAGAATCTCTCTAGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR CCA 90 bp | AAATGTCCACCAAAGGGGAAGGGTGTAAACAGAACCATGGCATCTGTAGAATACATTCTTCTTTCATGGTaGCAGAAGTCCATGCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: KCPPKGKGVNRTMASVEYILLSW*QKSMQD Trigger: ATCTTGCATGGACTTCTGCCACCATGAAAGAAGAAT...GTATTCTACAGATGCCATGGTTCTGTTTACACCCTTCCCCTTTGGTGGACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR CCA 90 bp | AAGATGAAATTTACTCAAAGACATGTATCTTCACACAGAGAATGTGACTCTCACCATGTCAGGCCAGTTTaGATTCCGGTATCTGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: KMKFTQRHVSSHRECDSHHVRPV*IPVSGC Trigger: GCACCCAGATACCGGAATCCAAACTGGCCTGACATG...GTGAGAGTCACATTCTCTGTGTGAAGATACATGTCTTTGAGTAAATTTCATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGAATGTGACTCTCACACTAATCACGTATCTAAAGCTGCAGTCAGTACCTTGGGTGACATGTAATGATTaGTTCTACATCCAAGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: ENVTLTLITYLKLQSVPWVTCND*FYIQGS Trigger: TGACCCTTGGATGTAGAACCAATCATTACATGTCAC...CCAAGGTACTGACTGCAGCTTTAGATACGTGATTAGTGTGAGAGTCACATTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR CAA 90 bp | GTATTAATGAGGGAGGTGCCTAGACATGTTCTCCAGACCTACTATTaGAGTGGTGGGTACAGGATGCTATTCATTTCATTATCCTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: VLMREVPRHVLQTYY*SGGYRMLFISLSFK Trigger: TTTAAAGGATAATGAAATGAATAGCATCCTGTACCCACCACTCAAATAGTAGGTCTGGAGAACATGTCTAGGCACCTCCCTCATTAATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000069568.4 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGAAATTTACTCAAAGACATGTATCTTCACACAGAGAATGTGACTCTCACGCACCTTGGGAAATGTaGTACTCAGAATGGGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: KMKFTQRHVSSHRECDSHAPWEM*YSEWEE Trigger: TTCTTCCCATTCTGAGTAGCACATTTCCCAAGGTGC...GTGAGAGTCACATTCTCTGTGTGAAGATACATGTCTTTGAGTAAATTTCATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR CAA 90 bp | AGGCTTCTAGACGATCTTCTAGAGTGCTCAGGTTCATATTTTACTTaGTGGTTCCTTCTTGAATATTTGTATGGGTTGACTCAAATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: RLLDDLLECSGSYFT*WFLLEYLYGLTQIH Trigger: ATGGATTTGAGTCAACCCATACAAATATTCAAGAAGGAACCACAAAGTAAAATATGAACCTGAGCACTCTAGAAGATCGTCTAGAAGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | GCATCAAGCCAGGCAGATACAAGAGTACCACCCTGCTaGGGTGGGCATATCTGGGGTGAGACCAGCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ASSQADTRVPPC*GGHIWGETSCS Trigger: GGAGCAGCTGGTCTCACCCCAGATATGCCCACCTCAGCAGGGTGGTACTCTTGTATCTGCCTGGCTTGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR CCA 72 bp | GGGTGTGGAGAGGAACTGACCAGGACCCAAGCCCTCTaGCTGTGTGTGTGCTCCTTCATGTCAGGCCAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GCGEELTRTQAL*LCVCSFMSGQF Trigger: AAACTGGCCTGACATGAAGGAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTGTGGAGAGGAACTGACCAGGACCCAAGCCCTCTGGCTGTGTGTGTGCTCCTGAAAAACTGGGATTaGGGGGAGAGCCATCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RVWRGTDQDPSPLAVCVLLKNWD*GESHLC Trigger: GCAAAGATGGCTCTCCCCCAAATCCCAGTTTTTCAG...GAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR TCA 72 bp | GCTACTCAGAATGGGAAGAAGGGTGTGGAGAGGAACTaGCCAGGACCCAAGCCCTCTGGCTGTGTGTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ATQNGKKGVERN*PGPKPSGCVCA Trigger: AGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACACCCTTCTTCCCATTCTGAGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR GCA 72 bp | AGATCTCCGGGACAGCTTGTAAGCAGCGATGAGGACTaGGGCTGTGGAAGCCTTTCCTTGTGCCTACTACCT | + |
|
Preference number: 3 (lower is better) Translates to: RSPGQLVSSDED*GCGSLSLCLLP Trigger: AGGTAGTAGGCACAAGGAAAGGCTTCCACAGCCGCAGTCCTCATCGCTGCTTACAAGCTGTCCCGGAGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR GCA 72 bp | GAACTGACCAGGACCCAAGCCCTCTGGCTGTGTGTGTaGTCCTTCATGTCAGGCCAGTTTGGATTCCGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ELTRTQALWLCV*SFMSGQFGFRY Trigger: ATACCGGAATCCAAACTGGCCTGACATGAAGGAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR GCA 72 bp | GGGGAAGGGCTTGGTGATGGCAGCCTAAGTATCCCTTaGCTTAACAGCATGGGTGGGAGTCACTTCCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: GEGLGDGSLSIP*LNSMGGSHFQL Trigger: CAGTTGGAAGTGACTCCCACCCATGCTGTTAAGGCAAGGGATACTTAGGCTGCCATCACCAAGCCCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | CAAATACAGATCTCCGGGACAGCTTGTAAGCAGCGATaGGGACTGCGGCTGTGGAAGCCTTTCCTTGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QIQISGTACKQR*GLRLWKPFLVP Trigger: AGGCACAAGGAAAGGCTTCCACAGCCGCAGTCCTCATCGCTGCTTACAAGCTGTCCCGGAGATCTGTATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR CCA 72 bp | TTGGGAAATGTGCTACTCAGAATGGGAAGAAGGGTGTaGAGAGGAACTGACCAGGACCCAAGCCCTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGNVLLRMGRRV*RGTDQDPSPLA Trigger: AGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACACCCTTCTTCCCATTCTGAGTAGCACATTTCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR CCA 72 bp | GAACATAAGCACACAGGCTCAACCGCTGAAAGGAGATaGGGAAAGCCTTCCAGTCAGCACAGTTTGCCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: EHKHTGSTAERR*GKPSSQHSLPP Trigger: CGGAGGCAAACTGTGCTGACTGGAAGGCTTTCCCCATCTCCTTTCAGCGGTTGAGCCTGTGTGCTTATGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | GGAAGAGCAGAAGAGTGTGAAGTAGCAAGTGGCACCTaGCAGGGCTGGAGATTGGTAGTGGAGAAATGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: GRAEECEVASGT*QGWRLVVEKCR Trigger: CCGACATTTCTCCACTACCAATCTCCAGCCCTGCCAGGTGCCACTTGCTACTTCACACTCTTCTGCTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGTGGAGAGGAACTGACCAGGACCCAAGCCCTCTGGCTGTGTGTGTGCTCCATCTGGGTGCCAACATaGGTAACAAAACAAATACAG | + |
|
Preference number: 3 (lower is better) Translates to: GCGEELTRTQALWLCVCSIWVPT*VTKQIQ Trigger: CTGTATTTGTTTTGTTACCAATGTTGGCACCCAGAT...GGAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR GCA 72 bp | AAAGGAGATGGGGAAAGCCTTCCAGTCAGCACAGTTTaGCTCCGTTCCCCAGAAATCTGGGCTGCTACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KGDGESLPVSTV*LRSPEIWAATC Trigger: ACAAGTAGCAGCCCAGATTTCTGGGGAACGGAGGCAAACTGTGCTGACTGGAAGGCTTTCCCCATCTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | AAGTCAACTGTACCAAGCATCTCTTTCTTACCAAGCTaGGCTGAGGGCTTGGGCTCTCGTGGTGACACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KSTVPSISFLPS*AEGLGSRGDTS Trigger: AGAGGTGTCACCACGAGAGCCCAAGCCCTCAGCCCAGCTTGGTAAGAAAGAGATGCTTGGTACAGTTGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | TTGATGGACCTCTTCTTGACAGCTCTTGTGGCAAGGTaGTTCTTGGATAAAACAGCCCAGCCTCAGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LMDLFLTALVAR*FLDKTAQPQPR Trigger: CCTGGGCTGAGGCTGGGCTGTTTTATCCAAGAACCACCTTGCCACAAGAGCTGTCAAGAAGAGGTCCATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | GAAGAGTGTGAAGTAGCAAGTGGCACCTGGCAGGGCTaGAGATTGGTAGTGGAGAAATGTCGGAAGCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: EECEVASGTWQG*RLVVEKCRKQQ Trigger: TTGCTGCTTCCGACATTTCTCCACTACCAATCTCCAGCCCTGCCAGGTGCCACTTGCTACTTCACACTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | CCAGACATGGTGGCGCATGCCTTTAATTGCAGCACTTaGGGAAGCAGAGCAGATGGATCTCTGAGTTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PDMVAHAFNCST*GSRADGSLSSR Trigger: CCTTGAACTCAGAGATCCATCTGCTCTGCTTCCCCAAGTGCTGCAATTAAAGGCATGCGCCACCATGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | ATAAAGACCACATATTCTGTCTTGCTGCACCGTTCCTaGAACAAATGCTCTGCCCCACCCGGCACGGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: IKTTYSVLLHRS*NKCSAPPGTGR Trigger: TCTACCCGTGCCGGGTGGGGCAGAGCATTTGTTTCAGGAACGGTGCAGCAAGACAGAATATGTGGTCTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | CCTCCTTCCAACTCTACTGATTTTGAGGGGAACCGATaGCCAAATCCTTCAGTGGTTCACCTCTCCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PPSNSTDFEGNR*PNPSVVHLSRL Trigger: CAGCCTGGAGAGGTGAACCACTGAAGGATTTGGTCATCGGTTCCCCTCAAAATCAGTAGAGTTGGAAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR GCA 72 bp | GCGGCTGTGGAAGCCTTTCCTTGTGCCTACTACCTATaGTGTAGCTCTGGCAACTGTCAGGAAGTGTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: AAVEAFPCAYYL*CSSGNCQEVYK Trigger: TTTGTACACTTCCTGACAGTTGCCAGAGCTACAGCATAGGTAGTAGGCACAAGGAAAGGCTTCCACAGCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR CCA 72 bp | TGGGCTGAGGGCTTGGGCTCTCGTGGTGACACCTCTTaGGGAGCATTAGTGTTTTGTCCTAAGTCTCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: WAEGLGSRGDTS*GALVFCPKSHF Trigger: AAAATGAGACTTAGGACAAAACACTAATGCTCCCCAAGAGGTGTCACCACGAGAGCCCAAGCCCTCAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | GACAATGTCTTCCTTCCTTCAACTGGAGGTTCTCTGTaGATCAGAGTGAGTGCTTTCCATGTGAGGGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: DNVFLPSTGGSL*IRVSAFHVRAG Trigger: CCCAGCCCTCACATGGAAAGCACTCACTCTGATCCACAGAGAACCTCCAGTTGAAGGAAGGAAGACATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | CTGATTTTGAGGGGAACCGATGACCAAATCCTTCAGTaGTTCACCTCTCCAGGCTGTGGGCAGAAACTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LILRGTDDQILQ*FTSPGCGQKLR Trigger: TCTGAGTTTCTGCCCACAGCCTGGAGAGGTGAACCACTGAAGGATTTGGTCATCGGTTCCCCTCAAAATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | GGCAGAGGCAAATGGCACCCACCATCTTCGTGGATGTaGTCACTGGGAATGAGAACAGGAAAAAGCTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GRGKWHPPSSWM*SLGMRTGKSCR Trigger: TCTACAGCTTTTTCCTGTTCTCATTCCCAGTGACCACATCCACGAAGATGGTGGGTGCCATTTGCCTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | GCTTGGAATGAAGATTGCAGAAGTGGCCAGACATGGTaGCGCATGCCTTTAATTGCAGCACTTGGGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: AWNEDCRSGQTW*RMPLIAALGEA Trigger: TGCTTCCCCAAGTGCTGCAATTAAAGGCATGCGCCACCATGTCTGGCCACTTCTGCAATCTTCATTCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | CCAGTCAGGCATGAGAACAGCAAGTCACTTGTGTGCTaGGCTGCTGAAATGAGGGTAAGCACAGAGATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PVRHENSKSLVC*AAEMRVSTEMY Trigger: GTACATCTCTGTGCTTACCCTCATTTCAGCAGCTCAGCACACAAGTGACTTGCTGTTCTCATGCCTGACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | TGTAAGATGCTGGTGATGGTAGGTATGCTATTGCTGTaGAGCAGAGCAATAGTTGGCCGGAGTTCAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CKMLVMVGMLLL*SRAIVGRSSGL Trigger: CAGGCCTGAACTCCGGCCAACTATTGCTCTGCTTCACAGCAATAGCATACCTACCATCACCAGCATCTTACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | TTCCAGCTTTGCCATTGCAAAGTTCCAGCCCATTTCTaGAGGATGACTACAGGCCACCTAGACCAAGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: FQLCHCKVPAHF*RMTTGHLDQAP Trigger: AGGTGCTTGGTCTAGGTGGCCTGTAGTCATCCTTCAGAAATGGGCTGGAACTTTGCAATGGCAAAGCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR GCA 72 bp | GACAGTAATCATGAACATCTAGCAAATAAGGCTATGTaGAGGGTCCCTGGGGATGGTGGCCTGAGCAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: DSNHEHLANKAM*RVPGDGGLSSL Trigger: CAAACTGCTCAGGCCACCATCCCCAGGGACCCTGCACATAGCCTTATTTGCTAGATGTTCATGATTACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | CACACACACACACACACACACACACACGGCTATCAATaGACTAACCCTGGAATTCCCTGCTCTGTAAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHGYQ*TNPGIPCSVRC Trigger: GCATCTTACAGAGCAGGGAATTCCAGGGTTAGTCCATTGATAGCCGTGTGTGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | GTGGAGGTAAATACTGAGCTAGGTACAAAGGGCCAATaGAGGAGAAAGGCAAAGGTTCAGGTTGGAGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VEVNTELGTKGQ*RRKAKVQVGGA Trigger: TGCACCTCCAACCTGAACCTTTGCCTTTCTCCTCCATTGGCCCTTTGTACCTAGCTCAGTATTTACCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | AGCTGTGAAGCAGTGAACATGGTTCTACCCGACTTATaGTGGAAGAAGCCATGGAAACAGAGTCCTGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SCEAVNMVLPDL*WKKPWKQSPAA Trigger: AGCTGCAGGACTCTGTTTCCATGGCTTCTTCCATCATAAGTCGGGTAGAACCATGTTCACTGCTTCACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | CCAGCTTACATAGGGCCTAAAGGTGGCCTGAGGGTTTaGGAAGCAGATGAGGACTGTACTGACAATAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: PAYIGPKGGLRV*EADEDCTDNKS Trigger: GGATTTATTGTCAGTACAGTCCTCATCTGCTTCTCAAACCCTCAGGCCACCTTTAGGCCCTATGTAAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | AATGAGTGTTTTGCCTACATGTGTCTGTGCATCATATaGGGCCAGAGAGGCCAGAAGAGGCAATCAGATCCC | + |
|
Preference number: 3 (lower is better) Translates to: NECFAYMCLCII*GQRGQKRQSDP Trigger: GGGATCTGATTGCCTCTTCTGGCCTCTCTGGCCTCATATGATGCACAGACACATGTAGGCAAAACACTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | GAGCTCTCTGCTGACGGGAAAGAGGGAATGGGCTGTTaGGGAGCATGGGAAATAATTGTTAGTGATAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ELSADGKEGMGC*GAWEIIVSDKA Trigger: GGCTTTATCACTAACAATTATTTCCCATGCTCCTCAACAGCCCATTCCCTCTTTCCCGTCAGCAGAGAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | GGGCTGGCCACATTCCTGCAGAGCAGATCGAACTCTTaGATTGTACAAATAACCCCTTCCCAGCACAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: GLATFLQSRSNS*IVQITPSQHKI Trigger: TATTTTGTGCTGGGAAGGGGTTATTTGTACAATCCAAGAGTTCGATCTGCTCTGCAGGAATGTGGCCAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | TTTGAACTTGTTGGGAGCCACACTAGGGTACCCCTGTaGTGTCTGCTTATAAATGCTGACAGAAGAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FELVGSHTRVPL*CLLINADRRGR Trigger: CCTTCCTCTTCTGTCAGCATTTATAAGCAGACACCACAGGGGTACCCTAGTGTGGCTCCCAACAAGTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | CACAAAGGTTCAGAGGACTTCTCAAGACACAGGGTGTaGTGGAGAGATGCTTCTTGGAAAGTGTCAGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: HKGSEDFSRHRV*WRDASWKVSGT Trigger: AGTACCTGACACTTTCCAAGAAGCATCTCTCCACCACACCCTGTGTCTTGAGAAGTCCTCTGAACCTTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | TATTGTTTGAGTAAGGGAAACAGTGAATACAAGACATaGTACAGACGGGGCTGGCCACATTCCTGCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YCLSKGNSEYKT*YRRGWPHSCRA Trigger: TGCTCTGCAGGAATGTGGCCAGCCCCGTCTGTACCATGTCTTGTATTCACTGTTTCCCTTACTCAAACAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | AAACAAGGTGACGGACAATGTCTTCCTTCCTTCAACTaGAGGTTCTCTGTGGATCAGAGTGAGTGCTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KQGDGQCLPSFN*RFSVDQSECFP Trigger: TGGAAAGCACTCACTCTGATCCACAGAGAACCTCCAGTTGAAGGAAGGAAGACATTGTCCGTCACCTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | GTTGGGGTAAGCCTAAAGTTAATGGCCAGAAATGCTTaGAATGAAGATTGCAGAAGTGGCCAGACATGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VGVSLKLMARNA*NEDCRSGQTWW Trigger: CCACCATGTCTGGCCACTTCTGCAATCTTCATTCCAAGCATTTCTGGCCATTAACTTTAGGCTTACCCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR CAA 90 bp | AGCCAATGCAAGCAGCATCAGCGTTATCTAGGAAATCTGTGTGATTTCAGGCGAGGGGGAGAGCCATCTTaGCATACAAAATATCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQCKQHQRYLGNLCDFRRGGEPS*HTKYPK Trigger: CTTTGGATATTTTGTATGCAAAGATGGCTCTCCCCC...TCGCCTGAAATCACACAGATTTCCTAGATAACGCTGATGCTGCTTGCATTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR CAA 90 bp | CAAATGTCCACCAAAGGGGAAGGGTGTAAACAGAACCATGGCATCTGTAGAATACATGTGGAGAACTCATaGTTACCTTCTGAGGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QMSTKGEGCKQNHGICRIHVENS*LPSEGK Trigger: CTTGCCCTCAGAAGGTAACAATGAGTTCTCCACATG...TATTCTACAGATGCCATGGTTCTGTTTACACCCTTCCCCTTTGGTGGACATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | AGGACTGTACTGACAATAAATCCCACTGCCTGTCTGTaGTTTTGGGATGTGAGAGAAAACAAGGTGACGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RTVLTINPTACL*FWDVRENKVTD Trigger: GTCCGTCACCTTGTTTTCTCTCACATCCCAAAATCACAGACAGGCAGTGGGATTTATTGTCAGTACAGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR GCA 72 bp | CTAAAGTTAATGGCCAGAAATGCTTGGAATGAAGATTaGAGAAGTGGCCAGACATGGTGGCGCATGCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LKLMARNAWNED*RSGQTWWRMPL Trigger: TAAAGGCATGCGCCACCATGTCTGGCCACTTCTGCAATCTTCATTCCAAGCATTTCTGGCCATTAACTTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | GGTCTTCAGTTGATGACAGACTTATACATGGAAGGTTaGTTGATGGACCTCTTCTTGACAGCTCTTGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GLQLMTDLYMEG*LMDLFLTALVA Trigger: TGCCACAAGAGCTGTCAAGAAGAGGTCCATCAACCAACCTTCCATGTATAAGTCTGTCATCAACTGAAGACC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | CACACCACATGTATATTTAGAACAGTCAAGCTGCTTTaGGGACAAGTCTGGCTTAGCAATCTGGGCAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: HTTCIFRTVKLL*GQVWLSNLGNH Trigger: ATGGTTGCCCAGATTGCTAAGCCAGACTTGTCCTCAAAGCAGCTTGACTGTTCTAAATATACATGTGGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | ACATCTTTTACTGAGGTGTCAAGTGAGGGTCTTAACTaGGGTATATGTGGGAAGCTGACTTCTAAGGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: TSFTEVSSEGLN*GICGKLTSKGP Trigger: TGGTCCCTTAGAAGTCAGCTTCCCACATATACCTCAGTTAAGACCCTCACTTGACACCTCAGTAAAAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | GGGAGGTGCCTAGACATGTTCTCCAGACCTACTATTTaGGTGGTGGGTACAGGATGCTATTCATTTCATTAT | + |
|
Preference number: 3 (lower is better) Translates to: GRCLDMFSRPTI*VVGTGCYSFHY Trigger: ATAATGAAATGAATAGCATCCTGTACCCACCACTCAAATAGTAGGTCTGGAGAACATGTCTAGGCACCTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000069568.4 |
||
| 3UTR GCA 72 bp | CCTTTTCTACCTTTCCTTATGGCCAAGTCTGTGGTCTaGTTCCCTAAAGAATATTCCAGCTTTGCCATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PFLPFLMAKSVV*FPKEYSSFAIA Trigger: TGCAATGGCAAAGCTGGAATATTCTTTAGGGAAGCAGACCACAGACTTGGCCATAAGGAAAGGTAGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | AAAGTGATTTTCAAAATAGCGGATGGGACACGGAGTTaGCAAATTCTGATTGTGGAGATGGAGAGGATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: KVIFKIADGTRS*QILIVEMERIH Trigger: GTGGATCCTCTCCATCTCCACAATCAGAATTTGCCAACTCCGTGTCCCATCCGCTATTTTGAAAATCACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR GCA 72 bp | TTATTCACACCACATGTATATTTAGAACAGTCAAGCTaGTTTGAGGACAAGTCTGGCTTAGCAATCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LFTPHVYLEQSS*FEDKSGLAIWA Trigger: TGCCCAGATTGCTAAGCCAGACTTGTCCTCAAAGCAGCTTGACTGTTCTAAATATACATGTGGTGTGAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTATGTTGTATCCACTACTTACACAGGACACTCACTCTTAAGGCAGAACATATCTGGGTGCCAACATaGGTAACAAAACAAATACAG | + |
|
Preference number: 3 (lower is better) Translates to: FLCCIHYLHRTLTLKAEHIWVPT*VTKQIQ Trigger: CTGTATTTGTTTTGTTACCAATGTTGGCACCCAGAT...ATGTTCTGCCTTAAGAGTGAGTGTCCTGTGTAAGTAGTGGATACAACATAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR TCA 72 bp | ACAGTGGAGATGTGTGTGAATAGACTGAGCAGACAATaGAAGTCTAACAATCAAGCTACACTCTCAAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: TVEMCVNRLSRQ*KSNNQATLSNH Trigger: ATGGTTTGAGAGTGTAGCTTGATTGTTAGACTTTCATTGTCTGCTCAGTCTATTCACACACATCTCCACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CCA 72 bp | GGAGTTCTGACTTGTGGTTTTTCTTATGAGTTCATGTaGAGAACTCATTGTTACCTTCTGAGGGCAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GVLTCGFSYEFM*RTHCYLLRARK Trigger: TTTTCTTGCCCTCAGAAGGTAACAATGAGTTCTCCACATGAACTCATAAGAAAAACCACAAGTCAGAACTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR GCA 72 bp | GCTCTGGCAACTGTCAGGAAGTGTACAAAGATCATCTaGCTAATATTTGAAGATGAGGATATTCTTCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ALATVRKCTKII*LIFEDEDILLS Trigger: TGAAAGAAGAATATCCTCATCTTCAAATATTAGGCAGATGATCTTTGTACACTTCCTGACAGTTGCCAGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR TCA 72 bp | CATAACAAGTCATTAATCTTCCTTAGCATGGATTCCTaGAAAGTTAGAGCAAGAACAAGGTCAATACATGGG | + |
|
Preference number: 3 (lower is better) Translates to: HNKSLIFLSMDS*KVRARTRSIHG Trigger: CCCATGTATTGACCTTGTTCTTGCTCTAACTTTTCAGGAATCCATGCTAAGGAAGATTAATGACTTGTTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | AGTGAGTTCCAGGACAGTTATGGGGAAACCTTGTCTTaGAATAACAAACAAATTCTGAAGTGGTCTAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SEFQDSYGETLS*NNKQILKWSSN Trigger: ATTACTAGACCACTTCAGAATTTGTTTGTTATTTCAAGACAAGGTTTCCCCATAACTGTCCTGGAACTCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR TCA 72 bp | GCATTAGTGTTTTGTCCTAAGTCTCATTTTCAGACCTaGACTAAGTTGACTCTTCATAAAGACCACATATTC | + |
|
Preference number: 3 (lower is better) Translates to: ALVFCPKSHFQT*TKLTLHKDHIF Trigger: GAATATGTGGTCTTTATGAAGAGTCAACTTAGTTCAGGTCTGAAAATGAGACTTAGGACAAAACACTAATGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR GCA 72 bp | AAACAAGCACCAGAAACCAACTATCTGATCTATTACTaGTATTATTGTTCAAACACCTACCAGAAGAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: KQAPETNYLIYY*YYCSNTYQKKQ Trigger: CTGTTTCTTCTGGTAGGTGTTTGAACAATAATAGCAGTAATAGATCAGATAGTTGGTTTCTGGTGCTTGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| CDS-3UTR GCA 90 bp | AGGGTGTGGAGAGGAACTGACCAGGACCCAAGCCCTCTGGCTGTGTGTGTGCTCTGCCATGGCACTGGATaGGGCTGCATCCTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVWRGTDQDPSPLAVCVLCHGTG*GCILCF Trigger: GAAGCAGAGGATGCAGCCGCATCCAGTGCCATGGCA...GAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGGAGAGGAACTGACCAGGACCCAAGCCCTCTGGCTGTGTGTGTGCTCCTTACCAGCTGCAGCACTTaGCATGGCACTGGATGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VWRGTDQDPSPLAVCVLLTSCST*HGTGCG Trigger: GCCGCATCCAGTGCCATGGCAAGTGCTGCAGCTGGT...AAGGAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGTGGAGAGGAACTGACCAGGACCCAAGCCCTCTGGCTGTGTGTGTGCTCCAGTTCTGGCACCAGCTaGAGCACTTGCCATGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GCGEELTRTQALWLCVCSSSGTS*STCHGT Trigger: AGTGCCATGGCAAGTGCTGCAGCTGGTGCCAGAACT...GGAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTGTGGAGAGGAACTGACCAGGACCCAAGCCCTCTGGCTGTGTGTGTGCTCGACACTAGACTGAAGTaGAGCAGGAGTGAGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RVWRGTDQDPSPLAVCVLDTRLK*SRSEPL Trigger: GAGTGGCTCACTCCTGCTGCACTTCAGTCTAGTGTC...GAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| 3UTR CAA 72 bp | CCAAGCATCTCTTTCTTACCAAGCTGGGCTGAGGGCTaGGGCTCTCGTGGTGACACCTCTTGGGGAGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: PSISFLPSWAEG*GSRGDTSWGAL Trigger: TAATGCTCCCCAAGAGGTGTCACCACGAGAGCCCAAGCCCTCAGCCCAGCTTGGTAAGAAAGAGATGCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| 3UTR CAA 72 bp | GAAAGGAGATGGGGAAAGCCTTCCAGTCAGCACAGTTaGCCTCCGTTCCCCAGAAATCTGGGCTGCTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERRWGKPSSQHS*PPFPRNLGCYL Trigger: CAAGTAGCAGCCCAGATTTCTGGGGAACGGAGGCAAACTGTGCTGACTGGAAGGCTTTCCCCATCTCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| CDS-3UTR GCA 90 bp | CTGCAACCATTCAAATGTCCACCAAAGGGGAAGGGTGTAAACAGAACCATGGCAACCAGCTGCAGCACTTaGCATGGCACTGGATGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQPFKCPPKGKGVNRTMATSCST*HGTGCG Trigger: GCCGCATCCAGTGCCATGGCAAGTGCTGCAGCTGGT...TGCCATGGTTCTGTTTACACCCTTCCCCTTTGGTGGACATTTGAATGGTTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
||
| CDS-3UTR TCA 90 bp | GCTTGTACTGCTGCTCAGGAAGCTAGGTTAGGATACTCCCACCCCACCAAAATATGGCTGACACTAGACTaGAGTGCAGCAGGAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACTAAQEARLGYSHPTKIWLTLD*SAAGVS Trigger: GCTCACTCCTGCTGCACTTCAGTCTAGTGTCAGCCA...TATTTTGGTGGGGTGGGAGTATCCTAACCTAGCTTCCTGAGCAGCAGTACAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGGAGAGGAACTGACCAGGACCCAAGCCCTCTGGCTGTGTGTGTGCTCCTTTCTTCTAGTTCATCCTaGAGTTCTTGGCTGACACTA | + |
|
Preference number: 4 (lower is better) Translates to: VWRGTDQDPSPLAVCVLLSSSSS*SSWLTL Trigger: TAGTGTCAGCCAAGAACTCCAGGATGAACTAGAAGA...AAGGAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAACCATTCAAATGTCCACCAAAGGGGAAGGGTGTAAACAGAACCATGGCACTGCAGCACTTGCCATaGCACTGGATGCGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQPFKCPPKGKGVNRTMALQHLP*HWMRLH Trigger: ATGCAGCCGCATCCAGTGCCATGGCAAGTGCTGCAG...TGCCATGGTTCTGTTTACACCCTTCCCCTTTGGTGGACATTTGAATGGTTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| CDS-3UTR GCA 90 bp | GAGGTGCCTAGACATGTTCTCCAGACCTACTATTTGAGTGGTGGGTACAGGATGGACACTAGACTGAAGTaGAGCAGGAGTGAGCCACTC | + |
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Preference number: 4 (lower is better) Translates to: EVPRHVLQTYYLSGGYRMDTRLK*SRSEPL Trigger: GAGTGGCTCACTCCTGCTGCACTTCAGTCTAGTGTC...CATCCTGTACCCACCACTCAAATAGTAGGTCTGGAGAACATGTCTAGGCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| CDS-3UTR CCA 90 bp | AGAGTAAGAGAGCTGCAACCATTCAAATGTCCACCAAAGGGGAAGGGTGTAAACTGTGACGCCCAGTTCTaGCACCAGCTGCAGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: RVRELQPFKCPPKGKGVNCDAQF*HQLQHL Trigger: CAAGTGCTGCAGCTGGTGCCAGAACTGGGCGTCACA...GTTTACACCCTTCCCCTTTGGTGGACATTTGAATGGTTGCAGCTCTCTTACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| CDS-3UTR CCA 90 bp | GTGCCTAGACATGTTCTCCAGACCTACTATTTGAGTGGTGGGTACAGGATGCTAACGGGAAAGAGGGAATaGGCTGTTGAGGAGCATGGG | + |
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Preference number: 4 (lower is better) Translates to: VPRHVLQTYYLSGGYRMLTGKRE*AVEEHG Trigger: CCCATGCTCCTCAACAGCCCATTCCCTCTTTCCCGT...TAGCATCCTGTACCCACCACTCAAATAGTAGGTCTGGAGAACATGTCTAGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069568.4 |
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| 3UTR CAA 72 bp | TCTGGCTGTGTGTGTGCTCCTTCATGTCAGGCCAGTTaGGATTCCGGTATCTGGGTGCCAACATTGGTAACA | + |
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Preference number: 4 (lower is better) Translates to: SGCVCAPSCQAS*DSGIWVPTLVT Trigger: TGTTACCAATGTTGGCACCCAGATACCGGAATCCAAACTGGCCTGACATGAAGGAGCACACACACAGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR CAA 72 bp | ATGTGCAGGGTCCCTGGGGATGGTGGCCTGAGCAGTTaGGGTCTTCAGTTGATGACAGACTTATACATGGAA | + |
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Preference number: 4 (lower is better) Translates to: MCRVPGDGGLSS*GLQLMTDLYME Trigger: TTCCATGTATAAGTCTGTCATCAACTGAAGACCCAAACTGCTCAGGCCACCATCCCCAGGGACCCTGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CAA 72 bp | CAAAGGGCCAATGGAGGAGAAAGGCAAAGGTTCAGGTaGGAGGTGCAGCAGAGGTTAATGGGACATGAACAT | + |
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Preference number: 4 (lower is better) Translates to: QRANGGERQRFR*EVQQRLMGHEH Trigger: ATGTTCATGTCCCATTAACCTCTGCTGCACCTCCAACCTGAACCTTTGCCTTTCTCCTCCATTGGCCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| CDS-3UTR CCA 90 bp | ACAGGCTCAACCGCTGAAAGGAGATGGGGAAAGCCTTCCAGTCAGCACAGTTTGTCTTCTAGTTCATCCTaGAGTTCTTGGCTGACACTA | + |
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Preference number: 4 (lower is better) Translates to: TGSTAERRWGKPSSQHSLSSSSS*SSWLTL Trigger: TAGTGTCAGCCAAGAACTCCAGGATGAACTAGAAGA...CAAACTGTGCTGACTGGAAGGCTTTCCCCATCTCCTTTCAGCGGTTGAGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| CDS-3UTR CCA 90 bp | GTATCTTCATTAAAGAATCAGAGGCATCAAGCCAGGCAGATACAAGAGTACCACCTGCAGCACTTGCCATaGCACTGGATGCGGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: VSSLKNQRHQARQIQEYHLQHLP*HWMRLH Trigger: ATGCAGCCGCATCCAGTGCCATGGCAAGTGCTGCAG...GTGGTACTCTTGTATCTGCCTGGCTTGATGCCTCTGATTCTTTAATGAAGATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR CAA 72 bp | CAGGCCAGTTTGGATTCCGGTATCTGGGTGCCAACATaGGTAACAAAACAAATACAGATCTCCGGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: QASLDSGIWVPT*VTKQIQISGTA Trigger: AGCTGTCCCGGAGATCTGTATTTGTTTTGTTACCAATGTTGGCACCCAGATACCGGAATCCAAACTGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCATCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAGTTAGTACTC | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPSCGCWE*NSGPLEEQLVL Trigger: GAGTACTAACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGATGGCTCACAACCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| CDS-3UTR TCA 90 bp | TTCCTAGAAGTTCCTAGAGAGATTCTCAAAGCACAGACACACCTTACAGTGTTCAGTAGGCCAGCCGGTTaGTCCAGCGAGGAATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: FLEVPREILKAQTHLTVFSRPAG*SSEESL Trigger: AAGAGATTCCTCGCTGGATCAACCGGCTGGCCTACT...GAACACTGTAAGGTGTGTCTGTGCTTTGAGAATCTCTCTAGGAACTTCTAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| CDS-3UTR TCA 90 bp | CTAGAGAGATTCTCAAAGCACAGACACACCTTACAGTGTTCACAAAGTACTGCTTGGCTGACACTAGACTaGAGTGCAGCAGGAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LERFSKHRHTLQCSQSTAWLTLD*SAAGVS Trigger: GCTCACTCCTGCTGCACTTCAGTCTAGTGTCAGCCA...AGCAGTACTTTGTGAACACTGTAAGGTGTGTCTGTGCTTTGAGAATCTCTCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| CDS-3UTR CCA 90 bp | AGAGTAAGAGAGCTGCAACCATTCAAATGTCCACCAAAGGGGAAGGGTGTAAACGTTAGTGATAAAGCCTaGAGAGGTGGGGTAGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: RVRELQPFKCPPKGKGVNVSDKA*RGGVGE Trigger: TTCCCCTACCCCACCTCTCCAGGCTTTATCACTAAC...GTTTACACCCTTCCCCTTTGGTGGACATTTGAATGGTTGCAGCTCTCTTACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069568.4 |
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| CDS-3UTR GCA 90 bp | TTCCTATGTTGTATCCACTACTTACACAGGACACTCACTCTTAAGGCAGAACATAGTTCTGGCACCAGCTaGAGCACTTGCCATGGCACT | + |
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Preference number: 4 (lower is better) Translates to: FLCCIHYLHRTLTLKAEHSSGTS*STCHGT Trigger: AGTGCCATGGCAAGTGCTGCAGCTGGTGCCAGAACT...ATGTTCTGCCTTAAGAGTGAGTGTCCTGTGTAAGTAGTGGATACAACATAGGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR CAA 72 bp | GGGTCTTCAGTTGATGACAGACTTATACATGGAAGGTaGGTTGATGGACCTCTTCTTGACAGCTCTTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GSSVDDRLIHGR*VDGPLLDSSCG Trigger: GCCACAAGAGCTGTCAAGAAGAGGTCCATCAACCAACCTTCCATGTATAAGTCTGTCATCAACTGAAGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| CDS-3UTR CCA 90 bp | CAAATGTCCACCAAAGGGGAAGGGTGTAAACAGAACCATGGCATCTGTAGAATAGATGGGACACGGAGTTaGCAAATTCTGATTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: QMSTKGEGCKQNHGICRIDGTRS*QILIVE Trigger: CTCCACAATCAGAATTTGCCAACTCCGTGTCCCATC...TATTCTACAGATGCCATGGTTCTGTTTACACCCTTCCCCTTTGGTGGACATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069568.4 |
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| 3UTR CAA 72 bp | CTTCAGTTGATGACAGACTTATACATGGAAGGTTGGTaGATGGACCTCTTCTTGACAGCTCTTGTGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LQLMTDLYMEGW*MDLFLTALVAR Trigger: CCTTGCCACAAGAGCTGTCAAGAAGAGGTCCATCAACCAACCTTCCATGTATAAGTCTGTCATCAACTGAAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CAA 72 bp | GATGCTTCTTGGAAAGTGTCAGGTACTAAAGCATTTTaGCCTGCCACATTGGAAGTGTCAGAGGGGACAGTA | + |
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Preference number: 4 (lower is better) Translates to: DASWKVSGTKAF*PATLEVSEGTV Trigger: TACTGTCCCCTCTGACACTTCCAATGTGGCAGGCAAAAATGCTTTAGTACCTGACACTTTCCAAGAAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CAA 72 bp | GTTGGCCCAGGGGCTGAGCACAAGAGTAATTATTGTTaGAGTAAGGGAAACAGTGAATACAAGACATGGTAC | + |
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Preference number: 4 (lower is better) Translates to: VGPGAEHKSNYC*SKGNSEYKTWY Trigger: GTACCATGTCTTGTATTCACTGTTTCCCTTACTCAAACAATAATTACTCTTGTGCTCAGCCCCTGGGCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CAA 72 bp | AAAACTCAGGAAATCCTCCTTCCAACTCTACTGATTTaGAGGGGAACCGATGACCAAATCCTTCAGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: KTQEILLPTLLI*RGTDDQILQWF Trigger: GAACCACTGAAGGATTTGGTCATCGGTTCCCCTCAAAATCAGTAGAGTTGGAAGGAGGATTTCCTGAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CAA 72 bp | GACTTATACATGGAAGGTTGGTTGATGGACCTCTTCTaGACAGCTCTTGTGGCAAGGTGGTTCTTGGATAAA | + |
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Preference number: 4 (lower is better) Translates to: DLYMEGWLMDLF*TALVARWFLDK Trigger: TTTATCCAAGAACCACCTTGCCACAAGAGCTGTCAAGAAGAGGTCCATCAACCAACCTTCCATGTATAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CAA 72 bp | AGGGAGGTGCCTAGACATGTTCTCCAGACCTACTATTaGAGTGGTGGGTACAGGATGCTATTCATTTCATTA | + |
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Preference number: 4 (lower is better) Translates to: REVPRHVLQTYY*SGGYRMLFISL Trigger: TAATGAAATGAATAGCATCCTGTACCCACCACTCAAATAGTAGGTCTGGAGAACATGTCTAGGCACCTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000069568.4 |
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| CDS-3UTR TCA 90 bp | AAGATGAAATTTACTCAAAGACATGTATCTTCACACAGAGAATGTGACTCTCACAGTAGGCCAGCCGGTTaGTCCAGCGAGGAATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: KMKFTQRHVSSHRECDSHSRPAG*SSEESL Trigger: AAGAGATTCCTCGCTGGATCAACCGGCTGGCCTACT...GTGAGAGTCACATTCTCTGTGTGAAGATACATGTCTTTGAGTAAATTTCATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR CAA 72 bp | TGTACTGACAATAAATCCCACTGCCTGTCTGTGATTTaGGGATGTGAGAGAAAACAAGGTGACGGACAATGT | + |
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Preference number: 4 (lower is better) Translates to: CTDNKSHCLSVI*GCERKQGDGQC Trigger: ACATTGTCCGTCACCTTGTTTTCTCTCACATCCCAAAATCACAGACAGGCAGTGGGATTTATTGTCAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CAA 72 bp | CCAGACTCTGATAGGCTAGATCCCATTTGGGCTAGCTaGCCAGAAAATTTTAATAAAGGGATATTGAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: PDSDRLDPIWAS*PENFNKGILKW Trigger: CCACTTCAATATCCCTTTATTAAAATTTTCTGGCAAGCTAGCCCAAATGGGATCTAGCCTATCAGAGTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| CDS-3UTR GCA 90 bp | AAATGTCCACCAAAGGGGAAGGGTGTAAACAGAACCATGGCATCTGTAGAATACCATAAGCAAACTCTCTaGCATATACTTCAATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: KCPPKGKGVNRTMASVEYHKQTL*HILQFQ Trigger: CTGGAATTGAAGTATATGGCAGAGAGTTTGCTTATG...GTATTCTACAGATGCCATGGTTCTGTTTACACCCTTCCCCTTTGGTGGACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| 3UTR CAA 72 bp | GACGATCTTCTAGAGTGCTCAGGTTCATATTTTACTTaGTGGTTCCTTCTTGAATATTTGTATGGGTTGACT | + |
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Preference number: 4 (lower is better) Translates to: DDLLECSGSYFT*WFLLEYLYGLT Trigger: AGTCAACCCATACAAATATTCAAGAAGGAACCACAAAGTAAAATATGAACCTGAGCACTCTAGAAGATCGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| CDS-3UTR GCA 90 bp | AAGATGAAATTTACTCAAAGACATGTATCTTCACACAGAGAATGTGACTCTCACCATAAGCAAACTCTCTaGCATATACTTCAATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: KMKFTQRHVSSHRECDSHHKQTL*HILQFQ Trigger: CTGGAATTGAAGTATATGGCAGAGAGTTTGCTTATG...GTGAGAGTCACATTCTCTGTGTGAAGATACATGTCTTTGAGTAAATTTCATCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR CAA 72 bp | CTGATACGGTGTACACAAACTATTAAAGAATTACCTTaGGGGTGTGTTTTAGATTCTAGGTTTCAATATCCA | + |
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Preference number: 4 (lower is better) Translates to: LIRCTQTIKELP*GCVLDSRFQYP Trigger: TGGATATTGAAACCTAGAATCTAAAACACACCCCAAAGGTAATTCTTTAATAGTTTGTGTACACCGTATCAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| 3UTR CAA 72 bp | ACCAGAAACCAACTATCTGATCTATTACTGCTATTATaGTTCAAACACCTACCAGAAGAAACAGTTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: TRNQLSDLLLLL*FKHLPEETVSL Trigger: AAGTGAAACTGTTTCTTCTGGTAGGTGTTTGAACAATAATAGCAGTAATAGATCAGATAGTTGGTTTCTGGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027783.14 |
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| CDS-3UTR CAA 90 bp | GGGTGTGGAGAGGAACTGACCAGGACCCAAGCCCTCTGGCTGTGTGTGTGCTCCCACCAGCTGCAGCACTaGCCATGGCACTGGATGCGG | + |
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Preference number: 5 (lower is better) Translates to: GCGEELTRTQALWLCVCSHQLQH*PWHWMR Trigger: CCGCATCCAGTGCCATGGCAAGTGCTGCAGCTGGTG...GGAGCACACACACAGCCAGAGGGCTTGGGTCCTGGTCAGTTCCTCTCCACACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| CDS-3UTR CAA 90 bp | GAGGTGCCTAGACATGTTCTCCAGACCTACTATTTGAGTGGTGGGTACAGGATGGGTGGGGTAGGGGAATaGGACGAAAGTAGCAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: EVPRHVLQTYYLSGGYRMGGVGE*DESSKH Trigger: GTGCTTGCTACTTTCGTCCAATTCCCCTACCCCACC...CATCCTGTACCCACCACTCAAATAGTAGGTCTGGAGAACATGTCTAGGCACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069568.4 |
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| CDS TCA 90 bp | TCTGCTTCTTCTAGTTCATCCTGGAGTTCTTGGCTGACACTAGACTaGAGTGCAGCAGGAGTGAGCCACTCCTTTGGCAGGCAACTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SASSSSSWSSWLTLD*SAAGVSHSFGRQLC Trigger: ACAGAGTTGCCTGCCAAAGGAGTGGCTCACTCCTGCTGCACTTCAGTCTAGTGTCAGCCAAGAACTCCAGGATGAACTAGAAGAAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| CDS-3UTR CAA 90 bp | ATGTCCACCAAAGGGGAAGGGTGTAAACAGAACCATGGCATCTGTAGAATACAGGGATGGGACACGGAGTaGGCAAATTCTGATTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: MSTKGEGCKQNHGICRIQGWDTE*ANSDCG Trigger: TCCACAATCAGAATTTGCCAACTCCGTGTCCCATCC...CTGTATTCTACAGATGCCATGGTTCTGTTTACACCCTTCCCCTTTGGTGGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069568.4 |
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| CDS-3UTR CAA 90 bp | TCAAAGCACAGACACACCTTACAGTGTTCACAAAGTACTGCTCATCAGAGTAAGAGAGGGAATGGGCTGTaGAGGAGCATGGGAAATAAT | + |
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Preference number: 5 (lower is better) Translates to: SKHRHTLQCSQSTAHQSKRGNGL*RSMGNN Trigger: ATTATTTCCCATGCTCCTCAACAGCCCATTCCCTCT...CTTACTCTGATGAGCAGTACTTTGTGAACACTGTAAGGTGTGTCTGTGCTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069568.4 |
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| CDS GCA 72 bp | AGTGTGACGCCCAGTTCTGGCACCAGCTGCAGCACTTaGCATGGCACTGGATGCGGCTGCATCCTCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SVTPSSGTSCST*HGTGCGCILCF Trigger: GAAGCAGAGGATGCAGCCGCATCCAGTGCCATGGCAAGTGCTGCAGCTGGTGCCAGAACTGGGCGTCACACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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| CDS TCA 72 bp | TCTAGTTCATCCTGGAGTTCTTGGCTGACACTAGACTaGAGTGCAGCAGGAGTGAGCCACTCCTTTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSSWSSWLTLD*SAAGVSHSFGR Trigger: CCTGCCAAAGGAGTGGCTCACTCCTGCTGCACTTCAGTCTAGTGTCAGCCAAGAACTCCAGGATGAACTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027783.14 ENSMUST00000161075.8 |
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