Pregenerated sensors for DESI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022472Ensembl transcript IDs: ENSMUST00000023110.7, ENSMUST00000089187.7, ENSMUST00000135988.8, ENSMUST00000146628.8, ENSMUST00000152227.8
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGCGAGGTGGGTGGTCCCGTGCAGTCCTGTTAGCTTTGGCCATTaGGTCTGCCCACAGAGTTCCCTCCTGGAGGCTGGATCTGAATGG | + |
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Preference number: 1 (lower is better) Translates to: LARWVVPCSPVSFGH*VCPQSSLLEAGSEW Trigger: CCATTCAGATCCAGCCTCCAGGAGGGAACTCTGTGGGCAGACCCAATGGCCAAAGCTAACAGGACTGCACGGGACCACCCACCTCGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023110.7 ENSMUST00000089187.7 ENSMUST00000135988.8 ENSMUST00000146628.8 |
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| 3UTR CCA 90 bp | AAGGAACAAGTGGGCTCAAGTTTCAGAAGTGGCAGGAAGCCACGGTaGGGGGCTCCCCATGGGTGTGGAGCTGAGTCTCAGGTGCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: KEQVGSSFRSGRKPR*GAPHGCGAESQVPA Trigger: AGCAGGCACCTGAGACTCAGCTCCACACCCATGGGGAGCCCCCCACCGTGGCTTCCTGCCACTTCTGAAACTTGAGCCCACTTGTTCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR CCA 90 bp | GGAGAGAGGTTTGAAGAGCAGATGAGAGGGCCAGCAGCATCTATGTaGCGTGACTGTGACGGAACAGAGACTCCCCCAGGGAGGACAGGT | + |
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Preference number: 1 (lower is better) Translates to: GERFEEQMRGPAASM*RDCDGTETPPGRTG Trigger: ACCTGTCCTCCCTGGGGGAGTCTCTGTTCCGTCACAGTCACGCCACATAGATGCTGCTGGCCCTCTCATCTGCTCTTCAAACCTCTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
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| 3UTR CCA 90 bp | CATTGGGTCTGCCCACAGAGTTCCCTCCTGGAGGCTGGATCTGAATaGAGTCCAGGAAGGGCCGAAGTGCTTGTCCAAAGGGCGTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: HWVCPQSSLLEAGSE*SPGRAEVLVQRAWK Trigger: TTTCCACGCCCTTTGGACAAGCACTTCGGCCCTTCCTGGACTCCATTCAGATCCAGCCTCCAGGAGGGAACTCTGTGGGCAGACCCAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023110.7 ENSMUST00000089187.7 ENSMUST00000135988.8 ENSMUST00000146628.8 |
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| 3UTR CCA 90 bp | ATAAAACTCACCTGGGTCCCACAGGGTGGCAACCTGGGTGGAATGTaGGTGTTCTCTGGAAAGAGGGTCCGAGATGGGGTTCTCCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: IKLTWVPQGGNLGGM*VFSGKRVRDGVLPD Trigger: GTCTGGGAGAACCCCATCTCGGACCCTCTTTCCAGAGAACACCCACATTCCACCCAGGTTGCCACCCTGTGGGACCCAGGTGAGTTTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR CCA 90 bp | CTCCAGGGGAATGGACAGTATAAAACTCACCTGGGTCCCACAGGGTaGCAACCTGGGTGGAATGTGGGTGTTCTCTGGAAAGAGGGTCCG | + |
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Preference number: 1 (lower is better) Translates to: LQGNGQYKTHLGPTG*QPGWNVGVLWKEGP Trigger: CGGACCCTCTTTCCAGAGAACACCCACATTCCACCCAGGTTGCCACCCTGTGGGACCCAGGTGAGTTTTATACTGTCCATTCCCCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR TCA 90 bp | TCTAGGAGCGGACAAGGGTCTCATGCCTCCACCTCCCTTGTCCCTTaGCCAACTGACCAATGGACAGGGCTGTCCACTATGTGGCATGAA | + |
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Preference number: 1 (lower is better) Translates to: SRSGQGSHASTSLVP*PTDQWTGLSTMWHE Trigger: TTCATGCCACATAGTGGACAGCCCTGTCCATTGGTCAGTTGGTCAAGGGACAAGGGAGGTGGAGGCATGAGACCCTTGTCCGCTCCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR CCA 90 bp | GGACAGTATAAAACTCACCTGGGTCCCACAGGGTGGCAACCTGGGTaGAATGTGGGTGTTCTCTGGAAAGAGGGTCCGAGATGGGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: GQYKTHLGPTGWQPG*NVGVLWKEGPRWGS Trigger: AGAACCCCATCTCGGACCCTCTTTCCAGAGAACACCCACATTCCACCCAGGTTGCCACCCTGTGGGACCCAGGTGAGTTTTATACTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR CCA 90 bp | ACTCAGATAGGAGGAGGAGGAGGAATGGCTTTCTCCTGTTTTCTCTaGCCTCACACCTGCTGCCAGTCTCCTTTGATCCTGACGCTGCGG | + |
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Preference number: 1 (lower is better) Translates to: TQIGGGGGMAFSCFL*PHTCCQSPLILTLR Trigger: CCGCAGCGTCAGGATCAAAGGAGACTGGCAGCAGGTGTGAGGCCAGAGAAAACAGGAGAAAGCCATTCCTCCTCCTCCTCCTATCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR CCA 90 bp | CAAGCTACGCTGAGGAAGAGCAGCTTAGGGGTGGGCATCGAGGGTTaGCACTCAGATAGGAGGAGGAGGAGGAATGGCTTTCTCCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: QATLRKSSLGVGIEG*HSDRRRRRNGFLLF Trigger: AAACAGGAGAAAGCCATTCCTCCTCCTCCTCCTATCTGAGTGCCAACCCTCGATGCCCACCCCTAAGCTGCTCTTCCTCAGCGTAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR TCA 90 bp | GTGCTTGTCCAAAGGGCGTGGAAAGAACTTCTGAGGGCAGGTCGGTaGTGTAAGAAGGGATCTTTCGCCCAGTCAGGAACTGCGCCACTT | + |
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Preference number: 1 (lower is better) Translates to: VLVQRAWKELLRAGR*CKKGSFAQSGTAPL Trigger: AAGTGGCGCAGTTCCTGACTGGGCGAAAGATCCCTTCTTACATCACCGACCTGCCCTCAGAAGTTCTTTCCACGCCCTTTGGACAAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023110.7 ENSMUST00000089187.7 ENSMUST00000135988.8 |
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| 3UTR GCA 90 bp | TGGGATGTGGGGTTCCTGGCCTGGGATTCTGGTGACAACGGAACTTaGATAGGGAAAGGAGACCAGAGAGACTGTCCAGTCTTCCCATCT | + |
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Preference number: 1 (lower is better) Translates to: WDVGFLAWDSGDNGT*IGKGDQRDCPVFPS Trigger: AGATGGGAAGACTGGACAGTCTCTCTGGTCTCCTTTCCCTATGCAAGTTCCGTTGTCACCAGAATCCCAGGCCAGGAACCCCACATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR CCA 90 bp | GATTTCTTCTGTGACTTCTGTGTTTCCCACATCAACCACAGAGTCTaGGGGCCCAAGCAATGTCCCTCCCGGGGTACAGCTGGAAATACC | + |
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Preference number: 1 (lower is better) Translates to: DFFCDFCVSHINHRV*GPKQCPSRGTAGNT Trigger: GGTATTTCCAGCTGTACCCCGGGAGGGACATTGCTTGGGCCCCCAGACTCTGTGGTTGATGTGGGAAACACAGAAGTCACAGAAGAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
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| 3UTR TCA 90 bp | GAGACTCCCCCAGGGAGGACAGGTATTCCAGAAAGATTTCTTCTGTaGCTTCTGTGTTTCCCACATCAACCACAGAGTCTGGGGGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: ETPPGRTGIPERFLL*LLCFPHQPQSLGAQ Trigger: TTGGGCCCCCAGACTCTGTGGTTGATGTGGGAAACACAGAAGTCACAGAAGAAATCTTTCTGGAATACCTGTCCTCCCTGGGGGAGTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
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| 3UTR TCA 90 bp | AGAAATGTAAAGGTGGGATGTGGGGTTCCTGGCCTGGGATTCTGGTaGCAACGGAACTTGCATAGGGAAAGGAGACCAGAGAGACTGTCC | + |
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Preference number: 1 (lower is better) Translates to: RNVKVGCGVPGLGFW*QRNLHRERRPERLS Trigger: GGACAGTCTCTCTGGTCTCCTTTCCCTATGCAAGTTCCGTTGTCACCAGAATCCCAGGCCAGGAACCCCACATCCCACCTTTACATTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR TCA 90 bp | AGGCGGAGGAAGACACACTCACTGATTCTAATCAATCAGCAGGAGTaGGAAGCCTCGCTTCTTTTGAGGCTTCAGCAGAAAGCATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: RRRKTHSLILINQQE*EASLLLRLQQKACW Trigger: CCAGCATGCTTTCTGCTGAAGCCTCAAAAGAAGCGAGGCTTCTCACTCCTGCTGATTGATTAGAATCAGTGAGTGTGTCTTCCTCCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
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| 3UTR GCA 90 bp | AGAAGCCTCGCTTCTTTTGAGGCTTCAGCAGAAAGCATGCTGGGATaGAATGCTGGCTGTTGGCGAGACTCAGGCTCTTTCTATAGCATA | + |
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Preference number: 1 (lower is better) Translates to: RSLASFEASAESMLG*NAGCWRDSGSFYSI Trigger: TATGCTATAGAAAGAGCCTGAGTCTCGCCAACAGCCAGCATTGCATCCCAGCATGCTTTCTGCTGAAGCCTCAAAAGAAGCGAGGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
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| 3UTR GCA 90 bp | CCATGTACTCCAAGTCCTTTGCTTCAGTTACTGCTAGAAGGTGACTaGTCCAGGGGAATGGACAGTATAAAACTCACCTGGGTCCCACAG | + |
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Preference number: 1 (lower is better) Translates to: PCTPSPLLQLLLEGD*SRGMDSIKLTWVPQ Trigger: CTGTGGGACCCAGGTGAGTTTTATACTGTCCATTCCCCTGGAGCAGTCACCTTCTAGCAGTAACTGAAGCAAAGGACTTGGAGTACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR CCA 90 bp | ACTGTCCAGTCTTCCCATCTCTCTGCTAGCCATGGCCACAGACGTTaGCATGGATGGCTGCTAGACATGACAGGAGATAATTCAAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: TVQSSHLSASHGHRR*HGWLLDMTGDNSSN Trigger: ATTGCTTGAATTATCTCCTGTCATGTCTAGCAGCCATCCATGCCAACGTCTGTGGCCATGGCTAGCAGAGAGATGGGAAGACTGGACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR CCA 90 bp | ATGTCTCAGAATACCATGGTTACTGCTGAGGAGAAAAACAGAGAATaGCCATGTGAGAGCACCCTAAGGACAGAGCTCTGGGCAGAGATG | + |
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Preference number: 1 (lower is better) Translates to: MSQNTMVTAEEKNRE*PCESTLRTELWAEM Trigger: CATCTCTGCCCAGAGCTCTGTCCTTAGGGTGCTCTCACATGGCCATTCTCTGTTTTTCTCCTCAGCAGTAACCATGGTATTCTGAGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR TCA 90 bp | GGAATCTGGAGTCTAGATCATAGACTTCTAGGCTATTGCTGCCCATaGAATCCTAGCAGCATATCATTAAGAAAACGCCCACTCACACCC | + |
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Preference number: 1 (lower is better) Translates to: GIWSLDHRLLGYCCP*NPSSISLRKRPLTP Trigger: GGGTGTGAGTGGGCGTTTTCTTAATGATATGCTGCTAGGATTTCATGGGCAGCAATAGCCTAGAAGTCTATGATCTAGACTCCAGATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR TCA 90 bp | GCAAACACCTCCGTATTAGACATTAGTTTGACTTCAAGGAAGTCATaGAGGAATCTCAAAGAAACCCTTCAGTCTAGGAGCGGACAAGGG | + |
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Preference number: 1 (lower is better) Translates to: ANTSVLDISLTSRKS*RNLKETLQSRSGQG Trigger: CCCTTGTCCGCTCCTAGACTGAAGGGTTTCTTTGAGATTCCTTCATGACTTCCTTGAAGTCAAACTAATGTCTAATACGGAGGTGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR TCA 90 bp | TGTGAAAGTCCCTACTGGAGACAACTCCAAATTTTCTTCCCACCATaGATCTACATCATTATGGTATTTTCTACATCAGAGACTTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: CESPYWRQLQIFFPP*IYIIMVFSTSETCF Trigger: AAAACAAGTCTCTGATGTAGAAAATACCATAATGATGTAGATTCATGGTGGGAAGAAAATTTGGAGTTGTCTCCAGTAGGGACTTTCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGCCAGGCAAAGGAAAAAGTGATGGCTTCCAGCAACCTCTGCCTTCCCAGTGCGGCTGCTCCGGCTaGGCTGTGATGAGTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LGPGKGKSDGFQQPLPSQCGCSG*AVMSGL Trigger: AAGGCCACTCATCACAGCCCAGCCGGAGCAGCCGCA...CTGGGAAGGCAGAGGTTGCTGGAAGCCATCACTTTTTCCTTTGCCTGGCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTGGGTGGTCCCGTGCAGTCCTGTTAGCTTTGGCCATTGGGTCTGCCCACAGGGTTTGAAGAGCAGATaGGAGGGCCAGCAGCATCTA | + |
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Preference number: 2 (lower is better) Translates to: RWVVPCSPVSFGHWVCPQGLKSR*EGQQHL Trigger: TAGATGCTGCTGGCCCTCTCATCTGCTCTTCAAACC...CTGTGGGCAGACCCAATGGCCAAAGCTAACAGGACTGCACGGGACCACCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
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| 3UTR-3UTR TCA 90 bp | GGGTGGTCCCGTGCAGTCCTGTTAGCTTTGGCCATTGGGTCTGCCCACAGAGTTTGTAGGCTTCTCCTCTaGGGCGGAGGAAGACACACT | + |
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Preference number: 2 (lower is better) Translates to: GWSRAVLLALAIGSAHRVCRLLL*GGGRHT Trigger: AGTGTGTCTTCCTCCGCCTCAGAGGAGAAGCCTACA...AACTCTGTGGGCAGACCCAATGGCCAAAGCTAACAGGACTGCACGGGACCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAATGGACAGTATAAAACTCACCTGGGTCCCACAGGGTGGCAACCTGGGTGGCAGGAAGGGCCGAAGTaGTTGTCCAAAGGGCGTGGA | + |
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Preference number: 2 (lower is better) Translates to: GNGQYKTHLGPTGWQPGWQEGPK*LSKGRG Trigger: TCCACGCCCTTTGGACAAGCACTTCGGCCCTTCCTG...CCACCCAGGTTGCCACCCTGTGGGACCCAGGTGAGTTTTATACTGTCCATTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGTCGGTGATGTAAGAAGGGATCTTTCGCCCAGTCAGGAACTGCGCCACTTCCTCCCGGGGTACAGCTaGAAATACCGCTGCTGCCGA | + |
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Preference number: 2 (lower is better) Translates to: QVGDVRRDLSPSQELRHFLPGYS*KYRCCR Trigger: TCGGCAGCAGCGGTATTTCCAGCTGTACCCCGGGAG...GAAGTGGCGCAGTTCCTGACTGGGCGAAAGATCCCTTCTTACATCACCGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
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| 3UTR-3UTR CCA 90 bp | TACCAGCTGGGGCCAGGCAAAGGAAAAAGTGATGGCTTCCAGCAACCTCTGCCTCTGGGTCCCACAGGGTaGCAACCTGGGTGGAATGTG | + |
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Preference number: 2 (lower is better) Translates to: YQLGPGKGKSDGFQQPLPLGPTG*QPGWNV Trigger: CACATTCCACCCAGGTTGCCACCCTGTGGGACCCAG...AGGCAGAGGTTGCTGGAAGCCATCACTTTTTCCTTTGCCTGGCCCCAGCTGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCCTACCCCAAAAGGAACAAGTGGGCTCAAGTTTCAGAAGTGGCAGGAAGCCCTCAGGTGCCTGCTCTaGGCTCCCTTCTCCATATCC | + |
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Preference number: 2 (lower is better) Translates to: RPTPKGTSGLKFQKWQEALRCLL*APFSIS Trigger: GGATATGGAGAAGGGAGCTCAGAGCAGGCACCTGAG...GGCTTCCTGCCACTTCTGAAACTTGAGCCCACTTGTTCCTTTTGGGGTAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAATGGACAGTATAAAACTCACCTGGGTCCCACAGGGTGGCAACCTGGGTGGGTTAGCTTTGGCCATTaGGTCTGCCCACAGAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: GNGQYKTHLGPTGWQPGWVSFGH*VCPQSS Trigger: GGAACTCTGTGGGCAGACCCAATGGCCAAAGCTAAC...CCACCCAGGTTGCCACCCTGTGGGACCCAGGTGAGTTTTATACTGTCCATTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
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| 3UTR-3UTR CCA 90 bp | TACCAGCTGGGGCCAGGCAAAGGAAAAAGTGATGGCTTCCAGCAACCTCTGCCTCCTCTCTCTCCAGTGTaGAGGACGCTTAGGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: YQLGPGKGKSDGFQQPLPPLSPV*RTLRQQ Trigger: CTGTTGCCTAAGCGTCCTCCACACTGGAGAGAGAGG...AGGCAGAGGTTGCTGGAAGCCATCACTTTTTCCTTTGCCTGGCCCCAGCTGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCGTGCAGTCCTGTTAGCTTTGGCCATTGGGTCTGCCCACAGAGTTCCCTCCAAGCCTCGCTTCTTTTaGGGCTTCAGCAGAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SRAVLLALAIGSAHRVPSKPRFF*GFSRKH Trigger: ATGCTTTCTGCTGAAGCCTCAAAAGAAGCGAGGCTT...GGAGGGAACTCTGTGGGCAGACCCAATGGCCAAAGCTAACAGGACTGCACGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTACCCCAAAAGGAACAAGTGGGCTCAAGTTTCAGAAGTGGCAGGAAGCCAAAAAGGAAAAGCCCTaGCGAGGTGGGTGGTCCCGT | + |
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Preference number: 2 (lower is better) Translates to: RPTPKGTSGLKFQKWQEAKKEKP*RGGWSR Trigger: ACGGGACCACCCACCTCGCCAGGGCTTTTCCTTTTT...GGCTTCCTGCCACTTCTGAAACTTGAGCCCACTTGTTCCTTTTGGGGTAGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGCCAGGCAAAGGAAAAAGTGATGGCTTCCAGCAACCTCTGCCTTCCCAGGGACATAGCTCTCTCTaGTCAGACAACAGGTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LGPGKGKSDGFQQPLPSQGHSSL*SDNRSA Trigger: AGCTGACCTGTTGTCTGACCAGAGAGAGCTATGTCC...CTGGGAAGGCAGAGGTTGCTGGAAGCCATCACTTTTTCCTTTGCCTGGCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGAATGGAGTCCAGGAAGGGCCGAAGTGCTTGTCCAAAGGGCGTGGAAAGAACTGAGGGCAGGTCGGTaGTGTAAGAAGGGATCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SEWSPGRAEVLVQRAWKELRAGR*CKKGSF Trigger: GAAAGATCCCTTCTTACATCACCGACCTGCCCTCAG...TTCTTTCCACGCCCTTTGGACAAGCACTTCGGCCCTTCCTGGACTCCATTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023110.7 ENSMUST00000089187.7 ENSMUST00000135988.8 ENSMUST00000146628.8 |
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| 3UTR-3UTR TCA 90 bp | AGCACCCTCTCTCTCCAGTGTGGAGGACGCTTAGGCAACAGCGTCAAAAGTGAACGTGGAAAGAACTTCTaGGGGCAGGTCGGTGATGTA | + |
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Preference number: 2 (lower is better) Translates to: STLSLQCGGRLGNSVKSERGKNF*GQVGDV Trigger: TACATCACCGACCTGCCCTCAGAAGTTCTTTCCACG...TTCACTTTTGACGCTGTTGCCTAAGCGTCCTCCACACTGGAGAGAGAGGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGCCGAAGTGCTTGTCCAAAGGGCGTGGAAAGAACTTCTGAGGGCAGGTATCAATCAGCAGGAGTaGGAAGCCTCGCTTCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: GRAEVLVQRAWKELLRAGINQQE*EASLLL Trigger: CAAAAGAAGCGAGGCTTCTCACTCCTGCTGATTGAT...ACCTGCCCTCAGAAGTTCTTTCCACGCCCTTTGGACAAGCACTTCGGCCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGACAGAAGGCCTGTGTCTCTGCTGCTGCAGCCTAGACCTTTATTAAAGGTGGGGTGGCAACCTGGGTaGAATGTGGGTGTTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SDRRPVSLLLQPRPLLKVGWQPG*NVGVLW Trigger: CCAGAGAACACCCACATTCCACCCAGGTTGCCACCC...CACCTTTAATAAAGGTCTAGGCTGCAGCAGCAGAGACACAGGCCTTCTGTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR-3UTR CCA 90 bp | AGACTGACACCACAGAAGGGAACCTTAAGGTCCCTCTGGAATCTGGAGTCTAGAGGGTGGCAACCTGGGTaGAATGTGGGTGTTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: RLTPQKGTLRSLWNLESRGWQPG*NVGVLW Trigger: CCAGAGAACACCCACATTCCACCCAGGTTGCCACCC...TCTAGACTCCAGATTCCAGAGGGACCTTAAGGTTCCCTTCTGTGGTGTCAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCTTCCCAGATACCAAGCTTTAAACACTGAACCTTCTAAGCCCTATTCTGCCTGCGGCTGCTCCGGCTaGGCTGTGATGAGTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: CLPRYQALNTEPSKPYSACGCSG*AVMSGL Trigger: AAGGCCACTCATCACAGCCCAGCCGGAGCAGCCGCA...GGCAGAATAGGGCTTAGAAGGTTCAGTGTTTAAAGCTTGGTATCTGGGAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAGGAAAAAGTGATGGCTTCCAGCAACCTCTGCCTTCCCAGATACCAAGCCTCAAGTTTCAGAAGTaGCAGGAAGCCACGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GKGKSDGFQQPLPSQIPSLKFQK*QEATVG Trigger: CCCCACCGTGGCTTCCTGCCACTTCTGAAACTTGAG...GCTTGGTATCTGGGAAGGCAGAGGTTGCTGGAAGCCATCACTTTTTCCTTTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR-3UTR TCA 90 bp | AATCCTAGCAGCATATCATTAAGAAAACGCCCACTCACACCCCAACCACACCCCGTCCTACATGCAGCCTaGAGAACTCCTTCCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: NPSSISLRKRPLTPQPHPVLHAA*RTPSLG Trigger: TCCCAGGGAAGGAGTTCTTCAGGCTGCATGTAGGAC...GGGGTGTGGTTGGGGTGTGAGTGGGCGTTTTCTTAATGATATGCTGCTAGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| 3UTR-3UTR TCA 90 bp | ACGCCCACTCACACCCCAACCACACCCCATAAGGTCAGAATGACAATGGAGACGCAACAGCGTCAAAAGTaGACTCACAGACAAGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: TPTHTPTTPHKVRMTMETQQRQK*THRQDS Trigger: GCTGTCTTGTCTGTGAGTTCACTTTTGACGCTGTTG...CGTCTCCATTGTCATTCTGACCTTATGGGGTGTGGTTGGGGTGTGAGTGGGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGATGGGGTTCTCCCAGACTGTGACTCTTGCTTTCTCTTTAAACAAGCACCCTAGGTGGGTGGTCCCGTaGAGTCCTGTTAGCTTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: EMGFSQTVTLAFSLNKHPRWVVP*SPVSFG Trigger: GCCAAAGCTAACAGGACTGCACGGGACCACCCACCT...AGGGTGCTTGTTTAAAGAGAAAGCAAGAGTCACAGTCTGGGAGAACCCCATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCCTAGCAGCATATCATTAAGAAAACGCCCACTCACACCCCAACCACACCCCCTCTGGCCTCACACCTaGTGCCAGTCTCCTTTGATC | + |
|
Preference number: 2 (lower is better) Translates to: NPSSISLRKRPLTPQPHPLWPHT*CQSPLI Trigger: GATCAAAGGAGACTGGCAGCAGGTGTGAGGCCAGAG...GGGGTGTGGTTGGGGTGTGAGTGGGCGTTTTCTTAATGATATGCTGCTAGGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCCTAGCAGCATATCATTAAGAAAACGCCCACTCACACCCCAACCACACCCCGAAGGCCTGTGTCTCTaGTGCTGCAGCCTAGACCTT | + |
|
Preference number: 2 (lower is better) Translates to: NPSSISLRKRPLTPQPHPEGLCL*CCSLDL Trigger: AAGGTCTAGGCTGCAGCAGCAGAGACACAGGCCTTC...GGGGTGTGGTTGGGGTGTGAGTGGGCGTTTTCTTAATGATATGCTGCTAGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGAAGGGATCTTTCGCCCAGTCAGGAACTGCGCCACTTCATTGCTAAAGGTATCAACCACAGAGTCTaGGGGCCCAAGCAATGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: VRRDLSPSQELRHFIAKGINHRV*GPKQCP Trigger: GGGACATTGCTTGGGCCCCCAGACTCTGTGGTTGAT...ACCTTTAGCAATGAAGTGGCGCAGTTCCTGACTGGGCGAAAGATCCCTTCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
||
| 3UTR-3UTR CCA 90 bp | TCAGACAGAAGGCCTGTGTCTCTGCTGCTGCAGCCTAGACCTTTATTAAAGGTGGAGGCTGGATCTGAATaGAGTCCAGGAAGGGCCGAA | + |
|
Preference number: 2 (lower is better) Translates to: SDRRPVSLLLQPRPLLKVEAGSE*SPGRAE Trigger: TTCGGCCCTTCCTGGACTCCATTCAGATCCAGCCTC...CACCTTTAATAAAGGTCTAGGCTGCAGCAGCAGAGACACAGGCCTTCTGTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGGCCAGGCAAAGGAAAAAGTGATGGCTTCCAGCAACCTCTGCCTTCCCAGGGTCCCTCTGGAATCTaGAGTCTAGATCATAGACTT | + |
|
Preference number: 2 (lower is better) Translates to: LGPGKGKSDGFQQPLPSQGPSGI*SLDHRL Trigger: AAGTCTATGATCTAGACTCCAGATTCCAGAGGGACC...CTGGGAAGGCAGAGGTTGCTGGAAGCCATCACTTTTTCCTTTGCCTGGCCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR CCA 90 bp | CGAGATGGGGTTCTCCCAGACTGTGACTCTTGCTTTCTCTTTAAACAAGCACCCGTTAGCTTTGGCCATTaGGTCTGCCCACAGAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RDGVLPDCDSCFLFKQAPVSFGH*VCPQSS Trigger: GGAACTCTGTGGGCAGACCCAATGGCCAAAGCTAAC...GGGTGCTTGTTTAAAGAGAAAGCAAGAGTCACAGTCTGGGAGAACCCCATCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCCTACCCCAAAAGGAACAAGTGGGCTCAAGTTTCAGAAGTGGCAGGAAGCAGTATAAAACTCACCTaGGTCCCACAGGGTGGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: KAYPKRNKWAQVSEVAGSSIKLT*VPQGGN Trigger: GTTGCCACCCTGTGGGACCCAGGTGAGTTTTATACT...GCTTCCTGCCACTTCTGAAACTTGAGCCCACTTGTTCCTTTTGGGGTAGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGATGGGGTTCTCCCAGACTGTGACTCTTGCTTTCTCTTTAAACAAGCACCCTCTGAGGGCAGGTCGGTaGTGTAAGAAGGGATCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: EMGFSQTVTLAFSLNKHPLRAGR*CKKGSF Trigger: GAAAGATCCCTTCTTACATCACCGACCTGCCCTCAG...AGGGTGCTTGTTTAAAGAGAAAGCAAGAGTCACAGTCTGGGAGAACCCCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGATGGGGTTCTCCCAGACTGTGACTCTTGCTTTCTCTTTAAACAAGCACCCTCGTGGAAAGAACTTCTaGGGGCAGGTCGGTGATGTA | + |
|
Preference number: 2 (lower is better) Translates to: EMGFSQTVTLAFSLNKHPRGKNF*GQVGDV Trigger: TACATCACCGACCTGCCCTCAGAAGTTCTTTCCACG...AGGGTGCTTGTTTAAAGAGAAAGCAAGAGTCACAGTCTGGGAGAACCCCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCAAAGGAAAAAGTGATGGCTTCCAGCAACCTCTGCCTTCCCAGATACCAAGCCAACAGCGTCAAAAGTaGACTCACAGACAAGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: GKGKSDGFQQPLPSQIPSQQRQK*THRQDS Trigger: GCTGTCTTGTCTGTGAGTTCACTTTTGACGCTGTTG...GCTTGGTATCTGGGAAGGCAGAGGTTGCTGGAAGCCATCACTTTTTCCTTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTCGATCTTTCTCAGGAGCATTGTCCTACATGCAGCCTGAAGAACTCCTTCCCGAAAGCATGCTGGGATaGAATGCTGGCTGTTGGCGA | + |
|
Preference number: 2 (lower is better) Translates to: IRSFSGALSYMQPEELLPESMLG*NAGCWR Trigger: TCGCCAACAGCCAGCATTGCATCCCAGCATGCTTTC...GGGAAGGAGTTCTTCAGGCTGCATGTAGGACAATGCTCCTGAGAAAGATCGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTTCCCAGATACCAAGCTTTAAACACTGAACCTTCTAAGCCCTATTCTGCCGAAGGCCTGTGTCTCTaGTGCTGCAGCCTAGACCTT | + |
|
Preference number: 2 (lower is better) Translates to: CLPRYQALNTEPSKPYSAEGLCL*CCSLDL Trigger: AAGGTCTAGGCTGCAGCAGCAGAGACACAGGCCTTC...GGCAGAATAGGGCTTAGAAGGTTCAGTGTTTAAAGCTTGGTATCTGGGAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAGAACTCCTTCCCTGGGAAATTTAAAAAGCCGTCCCTGTTAGCTCTGATGGAGGCTGGATCTGAATaGAGTCCAGGAAGGGCCGAA | + |
|
Preference number: 2 (lower is better) Translates to: LKNSFPGKFKKPSLLALMEAGSE*SPGRAE Trigger: TTCGGCCCTTCCTGGACTCCATTCAGATCCAGCCTC...CATCAGAGCTAACAGGGACGGCTTTTTAAATTTCCCAGGGAAGGAGTTCTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCGATCTTTCTCAGGAGCATTGTCCTACATGCAGCCTGAAGAACTCCTTCCCCACAGAGTTCCCTCCTaGAGGCTGGATCTGAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: IRSFSGALSYMQPEELLPHRVPS*RLDLNG Trigger: TCCATTCAGATCCAGCCTCCAGGAGGGAACTCTGTG...GGGAAGGAGTTCTTCAGGCTGCATGTAGGACAATGCTCCTGAGAAAGATCGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCGCCCAGTCAGGAACTGCGCCACTTCATTGCTAAAGGTGTTACAGTTGTGTTGCAATGCTGGCTGTTaGCGAGACTCAGGCTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: FRPVRNCATSLLKVLQLCCNAGC*RDSGSF Trigger: GAAAGAGCCTGAGTCTCGCCAACAGCCAGCATTGCA...ACACAACTGTAACACCTTTAGCAATGAAGTGGCGCAGTTCCTGACTGGGCGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTCCAAGTCCTTTGCTTCAGTTACTGCTAGAAGGTGACTGCTCCAGGGGAATGGAGCATTGTCCTACATaGAGCCTGAAGAACTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TPSPLLQLLLEGDCSRGMEHCPT*SLKNSF Trigger: GAAGGAGTTCTTCAGGCTGCATGTAGGACAATGCTC...CATTCCCCTGGAGCAGTCACCTTCTAGCAGTAACTGAAGCAAAGGACTTGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR GCA 90 bp | TACCAGCTGGGGCCAGGCAAAGGAAAAAGTGATGGCTTCCAGCAACCTCTGCCTCCAGACTGTGACTCTTaGTTTCTCTTTAAACAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: YQLGPGKGKSDGFQQPLPPDCDS*FLFKQA Trigger: TGCTTGTTTAAAGAGAAAGCAAGAGTCACAGTCTGG...AGGCAGAGGTTGCTGGAAGCCATCACTTTTTCCTTTGCCTGGCCCCAGCTGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTTCCCAGATACCAAGCTTTAAACACTGAACCTTCTAAGCCCTATTCTGCCGGCCTGTGTCTCTGCTaGTGCAGCCTAGACCTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: CLPRYQALNTEPSKPYSAGLCLC*CSLDLY Trigger: ATAAAGGTCTAGGCTGCAGCAGCAGAGACACAGGCC...GGCAGAATAGGGCTTAGAAGGTTCAGTGTTTAAAGCTTGGTATCTGGGAAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTTTCGCCCAGTCAGGAACTGCGCCACTTCATTGCTAAAGGTGTTACAGTTGCAGCAGAAAGCATGCTaGGATGCAATGCTGGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: IFRPVRNCATSLLKVLQLQQKAC*DAMLAV Trigger: AACAGCCAGCATTGCATCCCAGCATGCTTTCTGCTG...CAACTGTAACACCTTTAGCAATGAAGTGGCGCAGTTCCTGACTGGGCGAAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACTATGTGGCATGAACCACGTGACTCCTTTTCCTCTCAGCTTGCTTGTACATAATGTGGGTGTTCTCTaGAAAGAGGGTCCGAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: PLCGMNHVTPFPLSLLVHNVGVL*KEGPRW Trigger: CCATCTCGGACCCTCTTTCCAGAGAACACCCACATT...ATGTACAAGCAAGCTGAGAGGAAAAGGAGTCACGTGGTTCATGCCACATAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGACACACTCACTGATTCTAATCAATCAGCAGGAGTGAGAAGCCTCGCTTCTCTTCAGCAGAAAGCATaGTGGGATGCAATGCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: EDTLTDSNQSAGVRSLASLQQKA*WDAMLA Trigger: AGCCAGCATTGCATCCCAGCATGCTTTCTGCTGAAG...AGAAGCGAGGCTTCTCACTCCTGCTGATTGATTAGAATCAGTGAGTGTGTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAAACACTGAACCTTCTAAGCCCTATTCTGCCAAAGAGACCAACACTAAACAGGGGTGGCAACCTGGGTaGAATGTGGGTGTTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LNTEPSKPYSAKETNTKQGWQPG*NVGVLW Trigger: CCAGAGAACACCCACATTCCACCCAGGTTGCCACCC...CTGTTTAGTGTTGGTCTCTTTGGCAGAATAGGGCTTAGAAGGTTCAGTGTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCTGCCCCATGTACTCCAAGTCCTTTGCTTCAGTTACTGCTAGAAGGTGACCCAGACTGTGACTCTTaGTTTCTCTTTAAACAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PAAPCTPSPLLQLLLEGDPDCDS*FLFKQA Trigger: TGCTTGTTTAAAGAGAAAGCAAGAGTCACAGTCTGG...GTCACCTTCTAGCAGTAACTGAAGCAAAGGACTTGGAGTACATGGGGCAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCTCATGAACAGTATGCTCCTGAGGTACTGGGACAGAGAAATGTAAAGGTGACCTTAAGGTCCCTCTaGAATCTGGAGTCTAGATCA | + |
|
Preference number: 2 (lower is better) Translates to: PAHEQYAPEVLGQRNVKVTLRSL*NLESRS Trigger: TGATCTAGACTCCAGATTCCAGAGGGACCTTAAGGT...CACCTTTACATTTCTCTGTCCCAGTACCTCAGGAGCATACTGTTCATGAGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCCTAGCAGCATATCATTAAGAAAACGCCCACTCACACCCCAACCACACCCCCCAGACTGTGACTCTTaGTTTCTCTTTAAACAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: NPSSISLRKRPLTPQPHPPDCDS*FLFKQA Trigger: TGCTTGTTTAAAGAGAAAGCAAGAGTCACAGTCTGG...GGGGTGTGGTTGGGGTGTGAGTGGGCGTTTTCTTAATGATATGCTGCTAGGATT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR CCA 72 bp | CTGACGCTGCGGCTGCTCCGGCTGGGCTGTGATGAGTaGCCTTGTCTCGGGAGGAGGGTAAACTTGTGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LTLRLLRLGCDE*PCLGRRVNLWL Trigger: TAACCACAAGTTTACCCTCCTCCCGAGACAAGGCCACTCATCACAGCCCAGCCGGAGCAGCCGCAGCGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR CCA 72 bp | TGCCCACAGAGTTCCCTCCTGGAGGCTGGATCTGAATaGAGTCCAGGAAGGGCCGAAGTGCTTGTCCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CPQSSLLEAGSE*SPGRAEVLVQR Trigger: CCTTTGGACAAGCACTTCGGCCCTTCCTGGACTCCATTCAGATCCAGCCTCCAGGAGGGAACTCTGTGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023110.7 ENSMUST00000089187.7 ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| 3UTR CCA 72 bp | ACAGGGTGGCAACCTGGGTGGAATGTGGGTGTTCTCTaGAAAGAGGGTCCGAGATGGGGTTCTCCCAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: TGWQPGWNVGVL*KEGPRWGSPRL Trigger: CAGTCTGGGAGAACCCCATCTCGGACCCTCTTTCCAGAGAACACCCACATTCCACCCAGGTTGCCACCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCTGGGTGGAATGTGGGTGTTCTCTGGAAAGAGGGTCCGAGATGGGGTTCTCGAAGGGCCGAAGTGCTaGTCCAAAGGGCGTGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NLGGMWVFSGKRVRDGVLEGPKC*SKGRGK Trigger: CTTTCCACGCCCTTTGGACAAGCACTTCGGCCCTTC...GAGAACCCCATCTCGGACCCTCTTTCCAGAGAACACCCACATTCCACCCAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| 3UTR TCA 72 bp | GGACAAGGGTCTCATGCCTCCACCTCCCTTGTCCCTTaGCCAACTGACCAATGGACAGGGCTGTCCACTATG | + |
|
Preference number: 3 (lower is better) Translates to: GQGSHASTSLVP*PTDQWTGLSTM Trigger: CATAGTGGACAGCCCTGTCCATTGGTCAGTTGGTCAAGGGACAAGGGAGGTGGAGGCATGAGACCCTTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR GCA 72 bp | CTCCATGATGCCACTGCTATGGCTAGTGGCAAAGCCTaGAGGGTAGGGGCAAGGGAGCCAATAGGGGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LHDATAMASGKA*RVGAREPIGAF Trigger: AAAAGCCCCTATTGGCTCCCTTGCCCCTACCCTGCAGGCTTTGCCACTAGCCATAGCAGTGGCATCATGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR CCA 72 bp | TGTGACTTCTGTGTTTCCCACATCAACCACAGAGTCTaGGGGCCCAAGCAATGTCCCTCCCGGGGTACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CDFCVSHINHRV*GPKQCPSRGTA Trigger: AGCTGTACCCCGGGAGGGACATTGCTTGGGCCCCCAGACTCTGTGGTTGATGTGGGAAACACAGAAGTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
||
| 3UTR CCA 72 bp | TTTGAAGAGCAGATGAGAGGGCCAGCAGCATCTATGTaGCGTGACTGTGACGGAACAGAGACTCCCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FEEQMRGPAASM*RDCDGTETPPG Trigger: CCCTGGGGGAGTCTCTGTTCCGTCACAGTCACGCCACATAGATGCTGCTGGCCCTCTCATCTGCTCTTCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
||
| 3UTR CCA 72 bp | AAAACTCACCTGGGTCCCACAGGGTGGCAACCTGGGTaGAATGTGGGTGTTCTCTGGAAAGAGGGTCCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KTHLGPTGWQPG*NVGVLWKEGPR Trigger: TCTCGGACCCTCTTTCCAGAGAACACCCACATTCCACCCAGGTTGCCACCCTGTGGGACCCAGGTGAGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR CCA 72 bp | CTGAGGAAGAGCAGCTTAGGGGTGGGCATCGAGGGTTaGCACTCAGATAGGAGGAGGAGGAGGAATGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LRKSSLGVGIEG*HSDRRRRRNGF Trigger: AAAGCCATTCCTCCTCCTCCTCCTATCTGAGTGCCAACCCTCGATGCCCACCCCTAAGCTGCTCTTCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR GCA 72 bp | GGGTTCCTGGCCTGGGATTCTGGTGACAACGGAACTTaGATAGGGAAAGGAGACCAGAGAGACTGTCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GFLAWDSGDNGT*IGKGDQRDCPV Trigger: GACTGGACAGTCTCTCTGGTCTCCTTTCCCTATGCAAGTTCCGTTGTCACCAGAATCCCAGGCCAGGAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR GCA 72 bp | GAAGCCTCGCTTCTTTTGAGGCTTCAGCAGAAAGCATaGTGGGATGCAATGCTGGCTGTTGGCGAGACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: EASLLLRLQQKA*WDAMLAVGETQ Trigger: CTGAGTCTCGCCAACAGCCAGCATTGCATCCCAGCATGCTTTCTGCTGAAGCCTCAAAAGAAGCGAGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCAAGTCCTTTGCTTCAGTTACTGCTAGAAGGTGACTGCTCCAGGGGAATGGCAGTCCTGTTAGCTTaGGCCATTGGGTCTGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TPSPLLQLLLEGDCSRGMAVLLA*AIGSAH Trigger: GTGGGCAGACCCAATGGCCAAAGCTAACAGGACTGC...CATTCCCCTGGAGCAGTCACCTTCTAGCAGTAACTGAAGCAAAGGACTTGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| 3UTR TCA 72 bp | TCTCCTCTGTACATGGAGAGAGGTTTGAAGAGCAGATaGGAGGGCCAGCAGCATCTATGTGGCGTGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPLYMERGLKSR*EGQQHLCGVTV Trigger: CACAGTCACGCCACATAGATGCTGCTGGCCCTCTCATCTGCTCTTCAAACCTCTCTCCATGTACAGAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
||
| 3UTR TCA 72 bp | CAAAGGGCGTGGAAAGAACTTCTGAGGGCAGGTCGGTaGTGTAAGAAGGGATCTTTCGCCCAGTCAGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: QRAWKELLRAGR*CKKGSFAQSGT Trigger: AGTTCCTGACTGGGCGAAAGATCCCTTCTTACATCACCGACCTGCCCTCAGAAGTTCTTTCCACGCCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023110.7 ENSMUST00000089187.7 ENSMUST00000135988.8 |
||
| 3UTR TCA 72 bp | GACATAGCTCTCTCTGGTCAGACAACAGGTCAGCTCTaGGGCAGAGATCTCCATGATGCCACTGCTATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DIALSGQTTGQL*GRDLHDATAMA Trigger: AGCCATAGCAGTGGCATCATGGAGATCTCTGCCTCAGAGCTGACCTGTTGTCTGACCAGAGAGAGCTATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR GCA 72 bp | GCTTCTTTTGAGGCTTCAGCAGAAAGCATGCTGGGATaGAATGCTGGCTGTTGGCGAGACTCAGGCTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASFEASAESMLG*NAGCWRDSGSF Trigger: GAAAGAGCCTGAGTCTCGCCAACAGCCAGCATTGCATCCCAGCATGCTTTCTGCTGAAGCCTCAAAAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
||
| 3UTR CCA 72 bp | TTTCAGGGAGGAAAGGCCTACCCCAAAAGGAACAAGTaGGCTCAAGTTTCAGAAGTGGCAGGAAGCCACGGT | + |
|
Preference number: 3 (lower is better) Translates to: FQGGKAYPKRNK*AQVSEVAGSHG Trigger: ACCGTGGCTTCCTGCCACTTCTGAAACTTGAGCCCACTTGTTCCTTTTGGGGTAGGCCTTTCCTCCCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR CCA 72 bp | AATGGACAGTATAAAACTCACCTGGGTCCCACAGGGTaGCAACCTGGGTGGAATGTGGGTGTTCTCTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NGQYKTHLGPTG*QPGWNVGVLWK Trigger: TTTCCAGAGAACACCCACATTCCACCCAGGTTGCCACCCTGTGGGACCCAGGTGAGTTTTATACTGTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR CCA 72 bp | TCTTCCCATCTCTCTGCTAGCCATGGCCACAGACGTTaGCATGGATGGCTGCTAGACATGACAGGAGATAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSHLSASHGHRR*HGWLLDMTGDN Trigger: ATTATCTCCTGTCATGTCTAGCAGCCATCCATGCCAACGTCTGTGGCCATGGCTAGCAGAGAGATGGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR CCA 72 bp | CTCTCTGCTAGCCATGGCCACAGACGTTGGCATGGATaGCTGCTAGACATGACAGGAGATAATTCAAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSASHGHRRWHG*LLDMTGDNSSN Trigger: ATTGCTTGAATTATCTCCTGTCATGTCTAGCAGCCATCCATGCCAACGTCTGTGGCCATGGCTAGCAGAGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCGCCCAGTCAGGAACTGCGCCACTTCATTGCTAAAGGTGTTACAGTTGTGTGAAGCCTCGCTTCTTTaGAGGCTTCAGCAGAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FRPVRNCATSLLKVLQLCEASLL*RLQQKA Trigger: TGCTTTCTGCTGAAGCCTCAAAAGAAGCGAGGCTTC...ACACAACTGTAACACCTTTAGCAATGAAGTGGCGCAGTTCCTGACTGGGCGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCTGTGTCTCTGCTGCTGCAGCCTAGACCTTTATTAAAGGTGACAGGTCAATCTTTCTCAGGAGCATaGTCCTACATGCAGCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RPVSLLLQPRPLLKVTGQSFSGA*SYMQPE Trigger: TTCAGGCTGCATGTAGGACAATGCTCCTGAGAAAGA...TTGACCTGTCACCTTTAATAAAGGTCTAGGCTGCAGCAGCAGAGACACAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR GCA 72 bp | CCAAGTCCTTTGCTTCAGTTACTGCTAGAAGGTGACTaGTCCAGGGGAATGGACAGTATAAAACTCACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PSPLLQLLLEGD*SRGMDSIKLTW Trigger: CCAGGTGAGTTTTATACTGTCCATTCCCCTGGAGCAGTCACCTTCTAGCAGTAACTGAAGCAAAGGACTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR CCA 72 bp | TCAGCAGAAAGCATGCTGGGATGCAATGCTGGCTGTTaGCGAGACTCAGGCTCTTTCTATAGCATAGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: SAESMLGCNAGC*RDSGSFYSIVT Trigger: AGTTACTATGCTATAGAAAGAGCCTGAGTCTCGCCAACAGCCAGCATTGCATCCCAGCATGCTTTCTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCTCATGAACAGTATGCTCCTGAGGTACTGGGACAGAGAAATGTAAAGGTGTCTTTCTCAGGAGCATaGTCCTACATGCAGCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PAHEQYAPEVLGQRNVKVSFSGA*SYMQPE Trigger: TTCAGGCTGCATGTAGGACAATGCTCCTGAGAAAGA...CACCTTTACATTTCTCTGTCCCAGTACCTCAGGAGCATACTGTTCATGAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR TCA 72 bp | TCGATCTTTCTCAGGAGCATTGTCCTACATGCAGCCTaGAGAACTCCTTCCCTGGGAAATTTAAAAAGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: SIFLRSIVLHAA*RTPSLGNLKSR Trigger: ACGGCTTTTTAAATTTCCCAGGGAAGGAGTTCTTCAGGCTGCATGTAGGACAATGCTCCTGAGAAAGATCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR TCA 72 bp | TACTCCAAGTCCTTTGCTTCAGTTACTGCTAGAAGGTaGCTGCTCCAGGGGAATGGACAGTATAAAACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: YSKSFASVTARR*LLQGNGQYKTH Trigger: GTGAGTTTTATACTGTCCATTCCCCTGGAGCAGTCACCTTCTAGCAGTAACTGAAGCAAAGGACTTGGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR TCA 72 bp | CCACTCACACCCCAACCACACCCCATAAGGTCAGAATaGCAATGGAGACGTATTAAGGATAATGTGAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PLTPQPHPIRSE*QWRRIKDNVKV Trigger: GACTTTCACATTATCCTTAATACGTCTCCATTGTCATTCTGACCTTATGGGGTGTGGTTGGGGTGTGAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR TCA 72 bp | AAGACACACTCACTGATTCTAATCAATCAGCAGGAGTaGGAAGCCTCGCTTCTTTTGAGGCTTCAGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KTHSLILINQQE*EASLLLRLQQK Trigger: TTTCTGCTGAAGCCTCAAAAGAAGCGAGGCTTCTCACTCCTGCTGATTGATTAGAATCAGTGAGTGTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
||
| 3UTR TCA 72 bp | CCAGTGTGGAGGACGCTTAGGCAACAGCGTCAAAAGTaGACTCACAGACAAGACAGCCTTAATAAATTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: PVWRTLRQQRQK*THRQDSLNKLV Trigger: TACTAATTTATTAAGGCTGTCTTGTCTGTGAGTTCACTTTTGACGCTGTTGCCTAAGCGTCCTCCACACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR TCA 72 bp | AGTCTAGATCATAGACTTCTAGGCTATTGCTGCCCATaGAATCCTAGCAGCATATCATTAAGAAAACGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLDHRLLGYCCP*NPSSISLRKRP Trigger: TGGGCGTTTTCTTAATGATATGCTGCTAGGATTTCATGGGCAGCAATAGCCTAGAAGTCTATGATCTAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR TCA 72 bp | TCCGTATTAGACATTAGTTTGACTTCAAGGAAGTCATaGAGGAATCTCAAAGAAACCCTTCAGTCTAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SVLDISLTSRKS*RNLKETLQSRS Trigger: GCTCCTAGACTGAAGGGTTTCTTTGAGATTCCTTCATGACTTCCTTGAAGTCAAACTAATGTCTAATACGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| 3UTR TCA 72 bp | GGTCAGAATGACAATGGAGACGTATTAAGGATAATGTaGAAGTCCCTACTGGAGACAACTCCAAATTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GQNDNGDVLRIM*KSLLETTPNFL Trigger: AAGAAAATTTGGAGTTGTCTCCAGTAGGGACTTTCACATTATCCTTAATACGTCTCCATTGTCATTCTGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| CDS-3UTR TCA 90 bp | GGGAATGGACAGTATAAAACTCACCTGGGTCCCACAGGGTGGCAACCTGGGTGGCCTGGAGGCTGGATCTaGATGGAGTCCAGGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GNGQYKTHLGPTGWQPGWPGGWI*MESRKG Trigger: GCCCTTCCTGGACTCCATTCAGATCCAGCCTCCAGG...CCACCCAGGTTGCCACCCTGTGGGACCCAGGTGAGTTTTATACTGTCCATTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152227.8 |
||
| CDS-3UTR CCA 90 bp | GATCTGAATGGAGTCCAGGAAGGGCCGAAGTGCTTGTCCAAAGGGCGTGGAAAGGGCGGGCCAGGCCCTTaGACAGGTCGTACACGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLNGVQEGPKCLSKGRGKGGPGP*TGRTRR Trigger: TCTACGTGTACGACCTGTCCAAGGGCCTGGCCCGCC...CTTTCCACGCCCTTTGGACAAGCACTTCGGCCCTTCCTGGACTCCATTCAGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023110.7 ENSMUST00000089187.7 ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGGTCCCGTGCAGTCCTGTTAGCTTTGGCCATTGGGTCTGCCCACAGAGTTATCAACCACAGAGTCTaGGGGCCCAAGCAATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GWSRAVLLALAIGSAHRVINHRV*GPKQCP Trigger: GGGACATTGCTTGGGCCCCCAGACTCTGTGGTTGAT...AACTCTGTGGGCAGACCCAATGGCCAAAGCTAACAGGACTGCACGGGACCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| 3UTR CAA 72 bp | CTAGGAGCGGACAAGGGTCTCATGCCTCCACCTCCCTaGTCCCTTGACCAACTGACCAATGGACAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGADKGLMPPPP*SLDQLTNGQGC Trigger: ACAGCCCTGTCCATTGGTCAGTTGGTCAAGGGACAAGGGAGGTGGAGGCATGAGACCCTTGTCCGCTCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| CDS-3UTR GCA 90 bp | TACCAGCTGGGGCCAGGCAAAGGAAAAAGTGATGGCTTCCAGCAACCTCTGCCTCAGGAAGGGCCGAAGTaGTTGTCCAAAGGGCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YQLGPGKGKSDGFQQPLPQEGPK*LSKGRG Trigger: TCCACGCCCTTTGGACAAGCACTTCGGCCCTTCCTG...AGGCAGAGGTTGCTGGAAGCCATCACTTTTTCCTTTGCCTGGCCCCAGCTGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152227.8 |
||
| CDS-3UTR CCA 90 bp | GGGATCTTTCGCCCAGTCAGGAACTGCGCCACTTCATTGCTAAAGGTGTTACAGGGCGGGCCAGGCCCTTaGACAGGTCGTACACGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GIFRPVRNCATSLLKVLQGGPGP*TGRTRR Trigger: TCTACGTGTACGACCTGTCCAAGGGCCTGGCCCGCC...CTGTAACACCTTTAGCAATGAAGTGGCGCAGTTCCTGACTGGGCGAAAGATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023110.7 ENSMUST00000089187.7 ENSMUST00000135988.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTAAACAAGCACCCTCTCTCTCCAGTGTGGAGGACGCTTAGGCAACAGCGTGGCGGGCCAGGCCCTTaGACAGGTCGTACACGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLNKHPLSPVWRTLRQQRGGPGP*TGRTRR Trigger: TCTACGTGTACGACCTGTCCAAGGGCCTGGCCCGCC...ACGCTGTTGCCTAAGCGTCCTCCACACTGGAGAGAGAGGGTGCTTGTTTAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCCAGGCAAAGGAAAAAGTGATGGCTTCCAGCAACCTCTGCCTTCCCAGATCAACCACAGAGTCTaGGGGCCCAAGCAATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGPGKGKSDGFQQPLPSQINHRV*GPKQCP Trigger: GGGACATTGCTTGGGCCCCCAGACTCTGTGGTTGAT...CTGGGAAGGCAGAGGTTGCTGGAAGCCATCACTTTTTCCTTTGCCTGGCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCCAGGCAAAGGAAAAAGTGATGGCTTCCAGCAACCTCTGCCTTCCCAGCGCCCAGTCAGGAACTaGGCCACTTCATTGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGPGKGKSDGFQQPLPSQRPVRN*ATSLLK Trigger: CTTTAGCAATGAAGTGGCGCAGTTCCTGACTGGGCG...CTGGGAAGGCAGAGGTTGCTGGAAGCCATCACTTTTTCCTTTGCCTGGCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152227.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGGGGTTCTCCCAGACTGTGACTCTTGCTTTCTCTTTAAACAAGCACCCTGGCGGGCCAGGCCCTTaGACAGGTCGTACACGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EMGFSQTVTLAFSLNKHPGGPGP*TGRTRR Trigger: TCTACGTGTACGACCTGTCCAAGGGCCTGGCCCGCC...AGGGTGCTTGTTTAAAGAGAAAGCAAGAGTCACAGTCTGGGAGAACCCCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| CDS-3UTR CCA 90 bp | TCAGACAGAAGGCCTGTGTCTCTGCTGCTGCAGCCTAGACCTTTATTAAAGGTGCTCCCGGGGTACAGCTaGAAATACCGCTGCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SDRRPVSLLLQPRPLLKVLPGYS*KYRCCR Trigger: TCGGCAGCAGCGGTATTTCCAGCTGTACCCCGGGAG...CACCTTTAATAAAGGTCTAGGCTGCAGCAGCAGAGACACAGGCCTTCTGTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000152227.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAATGGAGTCCAGGAAGGGCCGAAGTGCTTGTCCAAAGGGCGTGGAAAGAAATCAACCACAGAGTCTaGGGGCCCAAGCAATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SEWSPGRAEVLVQRAWKEINHRV*GPKQCP Trigger: GGGACATTGCTTGGGCCCCCAGACTCTGTGGTTGAT...TTCTTTCCACGCCCTTTGGACAAGCACTTCGGCCCTTCCTGGACTCCATTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
||
| 3UTR CAA 72 bp | TGTGGCATGAACCACGTGACTCCTTTTCCTCTCAGCTaGCTTGTACATGCCCAGGGGGAGTCACCTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CGMNHVTPFPLS*LVHAQGESPAH Trigger: ATGAGCAGGTGACTCCCCCTGGGCATGTACAAGCAAGCTGAGAGGAAAAGGAGTCACGTGGTTCATGCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| CDS-3UTR CCA 90 bp | ATTCGATCTTTCTCAGGAGCATTGTCCTACATGCAGCCTGAAGAACTCCTTCCCCTCCCGGGGTACAGCTaGAAATACCGCTGCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IRSFSGALSYMQPEELLPLPGYS*KYRCCR Trigger: TCGGCAGCAGCGGTATTTCCAGCTGTACCCCGGGAG...GGGAAGGAGTTCTTCAGGCTGCATGTAGGACAATGCTCCTGAGAAAGATCGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000152227.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAAAGCATGCTGGGATGCAATGCTGGCTGTTGGCGAGACTCAGGCTCTTTCAGCTGGAAATACCGCTaGTGCCGAAGAAGAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AESMLGCNAGCWRDSGSFSWKYR*CRRRTH Trigger: ATGAGTTCTTCTTCGGCAGCAGCGGTATTTCCAGCT...GAAAGAGCCTGAGTCTCGCCAACAGCCAGCATTGCATCCCAGCATGCTTTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
||
| CDS-3UTR TCA 90 bp | AGACTGACACCACAGAAGGGAACCTTAAGGTCCCTCTGGAATCTGGAGTCTAGACTGAGGGCAGGTCGGTaGTGTAAGAAGGGATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLTPQKGTLRSLWNLESRLRAGR*CKKGSF Trigger: GAAAGATCCCTTCTTACATCACCGACCTGCCCTCAG...TCTAGACTCCAGATTCCAGAGGGACCTTAAGGTTCCCTTCTGTGGTGTCAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152227.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCTACCCCAAAAGGAACAAGTGGGCTCAAGTTTCAGAAGTGGCAGGAAGCCTGGAAATACCGCTGCTaGCGAAGAAGAACTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPTPKGTSGLKFQKWQEAWKYRC*RRRTHP Trigger: AGGATGAGTTCTTCTTCGGCAGCAGCGGTATTTCCA...GGCTTCCTGCCACTTCTGAAACTTGAGCCCACTTGTTCCTTTTGGGGTAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152227.8 |
||
| CDS-3UTR CCA 90 bp | CCACTATGTGGCATGAACCACGTGACTCCTTTTCCTCTCAGCTTGCTTGTACATGAGGCTGGATCTGAATaGAGTCCAGGAAGGGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLCGMNHVTPFPLSLLVHEAGSE*SPGRAE Trigger: TTCGGCCCTTCCTGGACTCCATTCAGATCCAGCCTC...ATGTACAAGCAAGCTGAGAGGAAAAGGAGTCACGTGGTTCATGCCACATAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152227.8 |
||
| CDS-3UTR CCA 90 bp | CCATGTACTCCAAGTCCTTTGCTTCAGTTACTGCTAGAAGGTGACTGCTCCAGGCACAGAGTTCCCTCCTaGAGGCTGGATCTGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PCTPSPLLQLLLEGDCSRHRVPS*RLDLNG Trigger: TCCATTCAGATCCAGCCTCCAGGAGGGAACTCTGTG...CCTGGAGCAGTCACCTTCTAGCAGTAACTGAAGCAAAGGACTTGGAGTACATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152227.8 |
||
| CDS-3UTR GCA 90 bp | CGAGATGGGGTTCTCCCAGACTGTGACTCTTGCTTTCTCTTTAAACAAGCACCCAATGTCCCTCCCAGATaGCTTCCAGTTGTTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RDGVLPDCDSCFLFKQAPNVPPR*LPVVSP Trigger: TGGGGAAACAACTGGAAGGCATCTGGGAGGGACATT...GGGTGCTTGTTTAAAGAGAAAGCAAGAGTCACAGTCTGGGAGAACCCCATCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146628.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACACTGAACCTTCTAAGCCCTATTCTGCCAAAGAGACCAACACTAAACAGGGCGGGCCAGGCCCTTaGACAGGTCGTACACGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNTEPSKPYSAKETNTKQGGPGP*TGRTRR Trigger: TCTACGTGTACGACCTGTCCAAGGGCCTGGCCCGCC...CTGTTTAGTGTTGGTCTCTTTGGCAGAATAGGGCTTAGAAGGTTCAGTGTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGGATCTTTCGCCCAGTCAGGAACTGCGCCACTTCATTGCTAAAGGTGTTATGGAAATACCGCTGCTaGCGAAGAAGAACTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGIFRPVRNCATSLLKVLWKYRC*RRRTHP Trigger: AGGATGAGTTCTTCTTCGGCAGCAGCGGTATTTCCA...TAACACCTTTAGCAATGAAGTGGCGCAGTTCCTGACTGGGCGAAAGATCCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
||
| 3UTR CAA 72 bp | GGGATCTTTCGCCCAGTCAGGAACTGCGCCACTTCATaGCTAAAGGTGTTACAGTTGTGTTCAAAGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GIFRPVRNCATS*LKVLQLCSKRL Trigger: CAACCTCTTTGAACACAACTGTAACACCTTTAGCAATGAAGTGGCGCAGTTCCTGACTGGGCGAAAGATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023110.7 ENSMUST00000089187.7 ENSMUST00000135988.8 |
||
| 3UTR CAA 72 bp | ATTAGAAGGGATGGCATTCGATCTTTCTCAGGAGCATaGTCCTACATGCAGCCTGAAGAACTCCTTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRRDGIRSFSGA*SYMQPEELLPW Trigger: CCAGGGAAGGAGTTCTTCAGGCTGCATGTAGGACAATGCTCCTGAGAAAGATCGAATGCCATCCCTTCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| CDS-3UTR TCA 90 bp | AGCACCCTCTCTCTCCAGTGTGGAGGACGCTTAGGCAACAGCGTCAAAAGTGAAGAAAGATTTCTTCTGTaGCTTCTGTGTTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: STLSLQCGGRLGNSVKSEERFLL*LLCFPH Trigger: ATGTGGGAAACACAGAAGTCACAGAAGAAATCTTTC...TTCACTTTTGACGCTGTTGCCTAAGCGTCCTCCACACTGGAGAGAGAGGGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTAAACAAGCACCCTCTCTCTCCAGTGTGGAGGACGCTTAGGCAACAGCGTGAAAGATTTCTTCTGTaGCTTCTGTGTTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SLNKHPLSPVWRTLRQQRERFLL*LLCFPH Trigger: ATGTGGGAAACACAGAAGTCACAGAAGAAATCTTTC...ACGCTGTTGCCTAAGCGTCCTCCACACTGGAGAGAGAGGGTGCTTGTTTAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAGGCCTACCCCAAAAGGAACAAGTGGGCTCAAGTTTCAGAAGTGGCAGGAGAAAGATTTCTTCTGTaGCTTCTGTGTTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GKAYPKRNKWAQVSEVAGERFLL*LLCFPH Trigger: ATGTGGGAAACACAGAAGTCACAGAAGAAATCTTTC...TCCTGCCACTTCTGAAACTTGAGCCCACTTGTTCCTTTTGGGGTAGGCCTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGAACTCCTTCCCTGGGAAATTTAAAAAGCCGTCCCTGTTAGCTCTGATGAGCTGGAAATACCGCTaGTGCCGAAGAAGAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKNSFPGKFKKPSLLALMSWKYR*CRRRTH Trigger: ATGAGTTCTTCTTCGGCAGCAGCGGTATTTCCAGCT...CATCAGAGCTAACAGGGACGGCTTTTTAAATTTCCCAGGGAAGGAGTTCTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000152227.8 |
||
| CDS-3UTR TCA 90 bp | TTAAACACTGAACCTTCTAAGCCCTATTCTGCCAAAGAGACCAACACTAAACAGCGTGGAAAGAACTTCTaGGGGCAGGTCGGTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LNTEPSKPYSAKETNTKQRGKNF*GQVGDV Trigger: TACATCACCGACCTGCCCTCAGAAGTTCTTTCCACG...CTGTTTAGTGTTGGTCTCTTTGGCAGAATAGGGCTTAGAAGGTTCAGTGTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152227.8 |
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| CDS-3UTR TCA 90 bp | GTGTTCAAAGAGGTTGTAGGCTTCTCCTCTGTACATGGAGAGAGGTTTGAAGAGTCCAGTTGTTTCCCTTaGATTCAGATCTTCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VFKEVVGFSSVHGERFEESSCFP*IQIFLP Trigger: AGGCAAGAAGATCTGAATTCAAGGGAAACAACTGGA...CTCTTCAAACCTCTCTCCATGTACAGAGGAGAAGCCTACAACCTCTTTGAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
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| 3UTR CAA 72 bp | TATTCTGCCAAAGAGACCAACACTAAACAGTCTCTGTaGGTTTCCACTCTACGTTGTGACAGCCACATACAC | + |
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Preference number: 4 (lower is better) Translates to: YSAKETNTKQSL*VSTLRCDSHIH Trigger: GTGTATGTGGCTGTCACAACGTAGAGTGGAAACCAACAGAGACTGTTTAGTGTTGGTCTCTTTGGCAGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| CDS-3UTR CAA 90 bp | GTCCCGTGCAGTCCTGTTAGCTTTGGCCATTGGGTCTGCCCACAGAGTTCCCTCCCAGATGCCTTCCAGTaGTTTCCCCAGCATGATGGG | + |
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Preference number: 5 (lower is better) Translates to: VPCSPVSFGHWVCPQSSLPDAFQ*FPQHDG Trigger: CCCATCATGCTGGGGAAACAACTGGAAGGCATCTGG...GAGGGAACTCTGTGGGCAGACCCAATGGCCAAAGCTAACAGGACTGCACGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000146628.8 |
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| CDS GCA 90 bp | TGTGCCAGATGCCTTCCAGTTGTTTCCCTTGAATTCAGATCTTCTTaGCTCTCACTTCCACCCAGCATGATGGGGCTGAGCCGGCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: CARCLPVVSLEFRSS*LSLPPSMMGLSRRA Trigger: GGCCCGCCGGCTCAGCCCCATCATGCTGGGTGGAAGTGAGAGGCAAGAAGATCTGAATTCAAGGGAAACAACTGGAAGGCATCTGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
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| CDS-3UTR CAA 90 bp | AGAGAGACTGTCCAGTCTTCCCATCTCTCTGCTAGCCATGGCCACAGACGTTGGCCAGATGCCTTCCAGTaGTTTCCCCAGCATGATGGG | + |
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Preference number: 5 (lower is better) Translates to: RETVQSSHLSASHGHRRWPDAFQ*FPQHDG Trigger: CCCATCATGCTGGGGAAACAACTGGAAGGCATCTGG...CCAACGTCTGTGGCCATGGCTAGCAGAGAGATGGGAAGACTGGACAGTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| CDS-3UTR CAA 90 bp | AGGTGGGTGGTCCCGTGCAGTCCTGTTAGCTTTGGCCATTGGGTCTGCCCACAGTTCCAGTTGTTTCCCTaGAATTCAGATCTTCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: RWVVPCSPVSFGHWVCPQFQLFP*NSDLLA Trigger: GGCAAGAAGATCTGAATTCAAGGGAAACAACTGGAA...CTGTGGGCAGACCCAATGGCCAAAGCTAACAGGACTGCACGGGACCACCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
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| CDS-3UTR CAA 90 bp | GGAAAGGCCTACCCCAAAAGGAACAAGTGGGCTCAAGTTTCAGAAGTGGCAGGACCAGATGCCTTCCAGTaGTTTCCCCAGCATGATGGG | + |
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Preference number: 5 (lower is better) Translates to: GKAYPKRNKWAQVSEVAGPDAFQ*FPQHDG Trigger: CCCATCATGCTGGGGAAACAACTGGAAGGCATCTGG...TCCTGCCACTTCTGAAACTTGAGCCCACTTGTTCCTTTTGGGGTAGGCCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| CDS-3UTR CAA 90 bp | AGACTGACACCACAGAAGGGAACCTTAAGGTCCCTCTGGAATCTGGAGTCTAGAGAAGGGCCGAAGTGCTaGTCCAAAGGGCGTGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: RLTPQKGTLRSLWNLESREGPKC*SKGRGK Trigger: CTTTCCACGCCCTTTGGACAAGCACTTCGGCCCTTC...TCTAGACTCCAGATTCCAGAGGGACCTTAAGGTTCCCTTCTGTGGTGTCAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152227.8 |
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| CDS-3UTR CAA 90 bp | GGGAATGGACAGTATAAAACTCACCTGGGTCCCACAGGGTGGCAACCTGGGTGGAACTGCGCCACTTCATaGCTAAAGGTGTTACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: GNGQYKTHLGPTGWQPGWNCATS*LKVLQL Trigger: CAACTGTAACACCTTTAGCAATGAAGTGGCGCAGTT...CCACCCAGGTTGCCACCCTGTGGGACCCAGGTGAGTTTTATACTGTCCATTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| CDS-3UTR CAA 90 bp | TCCCGTGCAGTCCTGTTAGCTTTGGCCATTGGGTCTGCCCACAGAGTTCCCTCCAAGAAGAACTCATCCTaGTGTACAACTATAGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SRAVLLALAIGSAHRVPSKKNSS*CTTIEV Trigger: CACCTCTATAGTTGTACACAAGGATGAGTTCTTCTT...GGAGGGAACTCTGTGGGCAGACCCAATGGCCAAAGCTAACAGGACTGCACGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135988.8 |
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| CDS-3UTR CAA 90 bp | AGCACCCTCTCTCTCCAGTGTGGAGGACGCTTAGGCAACAGCGTCAAAAGTGAAAACTGCGCCACTTCATaGCTAAAGGTGTTACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: STLSLQCGGRLGNSVKSENCATS*LKVLQL Trigger: CAACTGTAACACCTTTAGCAATGAAGTGGCGCAGTT...TTCACTTTTGACGCTGTTGCCTAAGCGTCCTCCACACTGGAGAGAGAGGGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146628.8 ENSMUST00000152227.8 |
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| CDS TCA 90 bp | TGTACAACTATAGAGGTGTGCCAGATGCCTTCCAGTTGTTTCCCTTaGATTCAGATCTTCTTGCCTCTCACTTCCACCCAGCATGATGGG | + |
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Preference number: 5 (lower is better) Translates to: CTTIEVCQMPSSCFP*IQIFLPLTSTQHDG Trigger: CCCATCATGCTGGGTGGAAGTGAGAGGCAAGAAGATCTGAATTCAAGGGAAACAACTGGAAGGCATCTGGCACACCTCTATAGTTGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
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| CDS-3UTR CAA 90 bp | AAGGCCTACCCCAAAAGGAACAAGTGGGCTCAAGTTTCAGAAGTGGCAGGAAGCAAGAAGAACTCATCCTaGTGTACAACTATAGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: KAYPKRNKWAQVSEVAGSKKNSS*CTTIEV Trigger: CACCTCTATAGTTGTACACAAGGATGAGTTCTTCTT...GCTTCCTGCCACTTCTGAAACTTGAGCCCACTTGTTCCTTTTGGGGTAGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152227.8 |
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| CDS-3UTR CAA 90 bp | GTGTTCAAAGAGGTTGTAGGCTTCTCCTCTGTACATGGAGAGAGGTTTGAAGAGCCAGATGCCTTCCAGTaGTTTCCCTTGAATTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: VFKEVVGFSSVHGERFEEPDAFQ*FPLNSD Trigger: ATCTGAATTCAAGGGAAACAACTGGAAGGCATCTGG...CTCTTCAAACCTCTCTCCATGTACAGAGGAGAAGCCTACAACCTCTTTGAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
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| CDS CAA 72 bp | GTGTACAACTATAGAGGTGTGCCAGATGCCTTCCAGTaGTTTCCCCAGCATGATGGGGCTGAGCCGGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: VYNYRGVPDAFQ*FPQHDGAEPAG Trigger: GCCCGCCGGCTCAGCCCCATCATGCTGGGGAAACAACTGGAAGGCATCTGGCACACCTCTATAGTTGTACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000152227.8 |
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| CDS GCA 72 bp | GCAATGTCCCTCCCGGGGTACAGCTGGAAATACCGCTaGTGCCGAAGAAGAACTCATCCTTGTGTACAACTA | + |
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Preference number: 6 (lower is better) Translates to: AMSLPGYSWKYR*CRRRTHPCVQL Trigger: TAGTTGTACACAAGGATGAGTTCTTCTTCGGCAGCAGCGGTATTTCCAGCTGTACCCCGGGAGGGACATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000152227.8 |
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| CDS GCA 72 bp | TGCCTTCCAGTTGTTTCCCTTGAATTCAGATCTTCTTaGCTCTCACTTCCACCCAGCATGATGGGGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: CLPVVSLEFRSS*LSLPPSMMGLS Trigger: GCTCAGCCCCATCATGCTGGGTGGAAGTGAGAGGCAAGAAGATCTGAATTCAAGGGAAACAACTGGAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
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| CDS CAA 90 bp | GGGGTACAGCTGGAAATACCGCTGCTGCCGAAGAAGAACTCATCCTaGTGTACAACTATAGAGGTGTGCCAGATGCCTTCCAGTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: GVQLEIPLLPKKNSS*CTTIEVCQMPSSCF Trigger: GAAACAACTGGAAGGCATCTGGCACACCTCTATAGTTGTACACAAGGATGAGTTCTTCTTCGGCAGCAGCGGTATTTCCAGCTGTACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000152227.8 |
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| CDS CAA 72 bp | CTGGAAATACCGCTGCTGCCGAAGAAGAACTCATCCTaGTGTACAACTATAGAGGTGTGCCAGATGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LEIPLLPKKNSS*CTTIEVCQMPS Trigger: GGAAGGCATCTGGCACACCTCTATAGTTGTACACAAGGATGAGTTCTTCTTCGGCAGCAGCGGTATTTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135988.8 ENSMUST00000152227.8 |
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| CDS CAA 72 bp | GTGTACAACTATAGAGGTGTGCCAGATGCCTTCCAGTaGTTTCCCTTGAATTCAGATCTTCTTGCCTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: VYNYRGVPDAFQ*FPLNSDLLASH Trigger: GTGAGAGGCAAGAAGATCTGAATTCAAGGGAAACAACTGGAAGGCATCTGGCACACCTCTATAGTTGTACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023110.7 |
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