Pregenerated sensors for DES (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026208Ensembl transcript IDs: ENSMUST00000027409.10
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGACACCTGCCAATAGCCAGGGCTCATGGGAGGGTCTGCAGAGGTaGCTGAGGGGTTCCCTGGGGTTGGGCAGCATGAAGACCACAAAG | + |
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Preference number: 1 (lower is better) Translates to: LTPANSQGSWEGLQR*LRGSLGLGSMKTTK Trigger: CTTTGTGGTCTTCATGCTGCCCAACCCCAGGGAACCCCTCAGCCACCTCTGCAGACCCTCCCATGAGCCCTGGCTATTGGCAGGTGTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR TCA 90 bp | CCCTCTCCTAAGCCAGGGGTCACAAAGGTGGAAGGGGAAGGGCGATaGCTTGAGCTGGGTTCTCTCTTAAGAGCCAGCTTTGACACCTGC | + |
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Preference number: 1 (lower is better) Translates to: PSPKPGVTKVEGEGR*LELGSLLRASFDTC Trigger: GCAGGTGTCAAAGCTGGCTCTTAAGAGAGAACCCAGCTCAAGTCATCGCCCTTCCCCTTCCACCTTTGTGACCCCTGGCTTAGGAGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR CCA 90 bp | GAGGGAGTTTGCAGCCAGTCTGGGTTACAGGAGACATTGTCTCAATaGAAAGGGACTGGCAGTGCCTTGGGGACAAAAGGACCGAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: EGVCSQSGLQETLSQ*KGTGSALGTKGPRE Trigger: TTCCCTCGGTCCTTTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATTGAGACAATGTCTCCTGTAACCCAGACTGGCTGCAAACTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR TCA 90 bp | TGGGGGTGTGACACGGTCCAGACTCCCCCTGAGACACAGTCAAGATaGCAGGGCCATGCAGGTTTGTGCTTGTCTCTTTATTATTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: WGCDTVQTPPETQSR*QGHAGLCLSLYYCF Trigger: GAAACAATAATAAAGAGACAAGCACAAACCTGCATGGCCCTGTCATCTTGACTGTGTCTCAGGGGGAGTCTGGACCGTGTCACACCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR TCA 90 bp | TTTGCCTGGATCGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTaGGCCTCGAGGATGAGGAGTTTAAAGCTGAATGGTTGGGTACAG | + |
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Preference number: 1 (lower is better) Translates to: FAWIGFCALKKGLKG*ASRMRSLKLNGWVQ Trigger: CTGTACCCAACCATTCAGCTTTAAACTCCTCATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCGATCCAGGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CCA 90 bp | AATGGAAAGGGACTGGCAGTGCCTTGGGGACAAAAGGACCGAGGGAACTTCCTTGGCAGGCAGGGGAGGTaGTACCCTCCCACCAACCTG | + |
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Preference number: 2 (lower is better) Translates to: NGKGLAVPWGQKDRGNFLGRQGR*YPPTNL Trigger: CAGGTTGGTGGGAGGGTACCACCTCCCCTGCCTGCC...AAGGAAGTTCCCTCGGTCCTTTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCCACATCCAGCACCTTCCGCTTCCCTCTTACAGCCCCCGCTTTCCAAGGGTCAGAGCCTGTGAGTaGAGAAAAGTGGCTGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: CSHIQHLPLPSYSPRFPRVRACE*RKVAGC Trigger: ACACCCAGCCACTTTTCTCCACTCACAGGCTCTGAC...CCTTGGAAAGCGGGGGCTGTAAGAGGGAAGCGGAAGGTGCTGGATGTGGGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CCA 90 bp | CTGGATCGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATGAGGGTCTGCAGAGGTaGCTGAGGGGTTCCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LDRLLRIKERVKRLSLEDEGLQR*LRGSLG Trigger: CCCCAGGGAACCCCTCAGCCACCTCTGCAGACCCTC...ATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCGATCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR TCA 90 bp | CGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATGAGGAGGGGGGTCAGAGCCTGTaGGTGGAGAAAAGTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RLLRIKERVKRLSLEDEEGGQSL*VEKSGW Trigger: CCAGCCACTTTTCTCCACTCACAGGCTCTGACCCCC...CTCCTCATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR GCA 90 bp | CTGGATCGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATAAGGCCATCCTGGGCTaGGATGGGAAAGAGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LDRLLRIKERVKRLSLEDKAILG*DGKERG Trigger: GCCCCTCTCTTTCCCATCGCAGCCCAGGATGGCCTT...ATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCGATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR TCA 90 bp | TCAATGGAAAGGGACTGGCAGTGCCTTGGGGACAAAAGGACCGAGGGAACTTCCAAAAGTGGCTGGGTGTaGTATCCGAGAGTGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SMERDWQCLGDKRTEGTSKSGWV*YPRVEE Trigger: CTCTTCCACTCTCGGATATCACACCCAGCCACTTTT...GGAAGTTCCCTCGGTCCTTTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CCA 90 bp | GTTACAGGAGACATTGTCTCAATGGAAAGGGACTGGCAGTGCCTTGGGGACAAAAATAGCCAGGGCTCATaGGAGGGTCTGCAGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: VTGDIVSMERDWQCLGDKNSQGS*EGLQRW Trigger: CCACCTCTGCAGACCCTCCCATGAGCCCTGGCTATT...TTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATTGAGACAATGTCTCCTGTAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR CAA 90 bp | TTGGGTACAGAGGGAGTTTGCAGCCAGTCTGGGTTACAGGAGACATaGTCTCAATGGAAAGGGACTGGCAGTGCCTTGGGGACAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LGTEGVCSQSGLQET*SQWKGTGSALGTKG Trigger: TCCTTTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATTGAGACAATGTCTCCTGTAACCCAGACTGGCTGCAAACTCCCTCTGTACCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR GCA 90 bp | CTGGATCGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATGGTACAGAGGGAGTTTaGAGCCAGTCTGGGTTACAG | + |
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Preference number: 2 (lower is better) Translates to: LDRLLRIKERVKRLSLEDGTEGV*SQSGLQ Trigger: CTGTAACCCAGACTGGCTGCAAACTCCCTCTGTACC...ATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCGATCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CCA 90 bp | CGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATGAGGAGTGTGATATCCGAGAGTaGAAGAGGCTGGCTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RLLRIKERVKRLSLEDEECDIRE*KRLASG Trigger: TCCTGAAGCCAGCCTCTTCCACTCTCGGATATCACA...CTCCTCATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CCA 90 bp | CGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATGAGGAGGGACCGAAGGCTCTGTaGCTTTTTAACAGAAACCCC | + |
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Preference number: 2 (lower is better) Translates to: RLLRIKERVKRLSLEDEEGPKAL*LFNRNP Trigger: GGGGTTTCTGTTAAAAAGCCACAGAGCCTTCGGTCC...CTCCTCATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCAATAACTCCTATACCCTTCCATTTCCCCTAACTACCTCAAATTTTCCTGGCTTCAGGAGGCAGTaGGGACGGGGCCAGGACACT | + |
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Preference number: 2 (lower is better) Translates to: FFNNSYTLPFPLTTSNFPGFRRQ*GRGQDT Trigger: AGTGTCCTGGCCCCGTCCTCACTGCCTCCTGAAGCC...AGGAAAATTTGAGGTAGTTAGGGGAAATGGAAGGGTATAGGAGTTATTGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR GCA 90 bp | GGTGTTGTTGTTTGTATTTGTTTTGTTTTGTTTCTTATACAGGGCCTCATTAGGTTCTGTCCAGGCCCCTaGGGTGGGAGGGGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GVVVCICFVLFLIQGLIRFCPGP*GGRGRQ Trigger: CTGCCTGCCCCTCCCACCGCAGGGGCCTGGACAGAA...CCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAACAACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCTTGTCTTTGCACTTCTGTGAACAACGTTATTTTGCCTGGATCGGCTTCGAGAGTGGAAGAGGCTaGCTTCAGGAGGCAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: KVLSLHFCEQRYFAWIGFESGRG*LQEAVR Trigger: CCTCACTGCCTCCTGAAGCCAGCCTCTTCCACTCTC...GAAGCCGATCCAGGCAAAATAACGTTGTTCACAGAAGTGCAAAGACAAGACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CCA 90 bp | CTGAGACACAGTCAAGATGACAGGGCCATGCAGGTTTGTGCTTGTCTCTTTATTGTGAGTGGAGAAAAGTaGCTGGGTGTGATATCCGAG | + |
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Preference number: 2 (lower is better) Translates to: LRHSQDDRAMQVCACLFIVSGEK*LGVISE Trigger: CTCGGATATCACACCCAGCCACTTTTCTCCACTCAC...AATAAAGAGACAAGCACAAACCTGCATGGCCCTGTCATCTTGACTGTGTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCAATAACTCCTATACCCTTCCATTTCCCCTAACTACCTCAAATTTTCCTCAGGGGTCACAAAGGTaGAAGGGGAAGGGCGATGAC | + |
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Preference number: 2 (lower is better) Translates to: FFNNSYTLPFPLTTSNFPQGSQR*KGKGDD Trigger: GTCATCGCCCTTCCCCTTCCACCTTTGTGACCCCTG...AGGAAAATTTGAGGTAGTTAGGGGAAATGGAAGGGTATAGGAGTTATTGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCTTGTCTTTGCACTTCTGTGAACAACGTTATTTTGCCTGGATCGGCTTCGAGACATTGTCTCAATaGAAAGGGACTGGCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: KVLSLHFCEQRYFAWIGFETLSQ*KGTGSA Trigger: GGCACTGCCAGTCCCTTTCCATTGAGACAATGTCTC...GAAGCCGATCCAGGCAAAATAACGTTGTTCACAGAAGTGCAAAGACAAGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCAATAACTCCTATACCCTTCCATTTCCCCTAACTACCTCAAATTTTCCTTCCTTCTGTAGCTCCTaGTCCCACATCCAGCACCTT | + |
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Preference number: 2 (lower is better) Translates to: FFNNSYTLPFPLTTSNFPSFCSS*SHIQHL Trigger: AAGGTGCTGGATGTGGGAGCAGGAGCTACAGAAGGA...AGGAAAATTTGAGGTAGTTAGGGGAAATGGAAGGGTATAGGAGTTATTGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR GCA 90 bp | TTAATTGAGACTAAATTCCATTGGAACTGCTTATGGATAGAGGGTGGCTTGACAAAGATGACAGGGCCATaGAGGTTTGTGCTTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LIETKFHWNCLWIEGGLTKMTGP*RFVLVS Trigger: AGAGACAAGCACAAACCTGCATGGCCCTGTCATCTT...TGTCAAGCCACCCTCTATCCATAAGCAGTTCCAATGGAATTTAGTCTCAATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCAATAACTCCTATACCCTTCCATTTCCCCTAACTACCTCAAATTTTCCTGCCTGGATCGGCTTCTaGGCATTAAAGAAAGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: FFNNSYTLPFPLTTSNFPAWIGF*ALKKGL Trigger: TAACCCTTTCTTTAATGCGCAGAAGCCGATCCAGGC...AGGAAAATTTGAGGTAGTTAGGGGAAATGGAAGGGTATAGGAGTTATTGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR CAA 90 bp | TCCTTCTGTTTGTTCTTGGGTGTTGTTGTTTGTATTTGTTTTGTTTaGTTTCTTATACAGGGCCTCATTAGGAAGCAGAGGCTGGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SFCLFLGVVVCICFV*FLIQGLIRKQRLAL Trigger: CAAAGCCAGCCTCTGCTTCCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAACAACACCCAAGAACAAACAGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGTTGTTGTTTGTATTTGTTTTGTTTTGTTTCTTATACAGGGCCTCATTAGGAGTTTGCAGCCAGTCTaGGTTACAGGAGACATTGTC | + |
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Preference number: 2 (lower is better) Translates to: GVVVCICFVLFLIQGLIRSLQPV*VTGDIV Trigger: GACAATGTCTCCTGTAACCCAGACTGGCTGCAAACT...CCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAACAACACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCAATAACTCCTATACCCTTCCATTTCCCCTAACTACCTCAAATTTTCCTGTCTTTGCACTTCTGTaGACAACGTTATTTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: FFNNSYTLPFPLTTSNFPVFALL*TTLFCL Trigger: CAGGCAAAATAACGTTGTTCACAGAAGTGCAAAGAC...AGGAAAATTTGAGGTAGTTAGGGGAAATGGAAGGGTATAGGAGTTATTGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR CAA 90 bp | AATTTTCCTTCTGTTTGTTCTTGGGTGTTGTTGTTTGTATTTGTTTaGTTTTGTTTCTTATACAGGGCCTCATTAGGAAGCAGAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NFPSVCSWVLLFVFV*FCFLYRASLGSRGW Trigger: CCAGCCTCTGCTTCCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAACAACACCCAAGAACAAACAGAAGGAAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGTTGTTGTTTGTATTTGTTTTGTTTTGTTTCTTATACAGGGCCTCATTAGGGAGACTAAATTCCATTaGAACTGCTTATGGATAGAG | + |
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Preference number: 2 (lower is better) Translates to: GVVVCICFVLFLIQGLIRETKFH*NCLWIE Trigger: CTCTATCCATAAGCAGTTCCAATGGAATTTAGTCTC...CCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAACAACACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR GCA 90 bp | GTTGTTTGTATTTGTTTTGTTTTGTTTCTTATACAGGGCCTCATTAGGAAGCAGAAAAAGTCTTGTCTTTaGACTTCTGTGAACAACGTT | + |
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Preference number: 2 (lower is better) Translates to: VVCICFVLFLIQGLIRKQKKSCL*TSVNNV Trigger: AACGTTGTTCACAGAAGTGCAAAGACAAGACTTTTT...CTGCTTCCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAAC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR TCA 72 bp | TCTGACCCAGGCTGGGGATGTCCACAAACTCGGTCCTaGCCCTGCAGATCCCAACACCCTCTCTGGTACCCT | + |
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Preference number: 3 (lower is better) Translates to: SDPGWGCPQTRS*PCRSQHPLWYP Trigger: AGGGTACCAGAGAGGGTGTTGGGATCTGCAGGGTCAGGACCGAGTTTGTGGACATCCCCAGCCTGGGTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR GCA 72 bp | CTCTTACAGCCCCCGCTTTCCAAGGCCATCCTGGGCTaGGATGGGAAAGAGAGGGGCCATGAGGGCAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LLQPPLSKAILG*DGKERGHEGSF Trigger: AAAACTGCCCTCATGGCCCCTCTCTTTCCCATCGCAGCCCAGGATGGCCTTGGAAAGCGGGGGCTGTAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR CCA 72 bp | CTCTGGTACCCTCTCCTAAGCCAGGGGTCACAAAGGTaGAAGGGGAAGGGCGATGACTTGAGCTGGGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: LWYPLLSQGSQR*KGKGDDLSWVL Trigger: GAGAACCCAGCTCAAGTCATCGCCCTTCCCCTTCCACCTTTGTGACCCCTGGCTTAGGAGAGGGTACCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CAA 90 bp | GTTACAGGAGACATTGTCTCAATGGAAAGGGACTGGCAGTGCCTTGGGGACAAAAGGGGTTCCCTGGGGTaGGGCAGCATGAAGACCACA | + |
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Preference number: 3 (lower is better) Translates to: VTGDIVSMERDWQCLGDKRGSLG*GSMKTT Trigger: TGTGGTCTTCATGCTGCCCAACCCCAGGGAACCCCT...TTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATTGAGACAATGTCTCCTGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR CCA 72 bp | AGGCTGAGCCTCGAGGATGAGGAGTTTAAAGCTGAATaGTTGGGTACAGAGGGAGTTTGCAGCCAGTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: RLSLEDEEFKAE*LGTEGVCSQSG Trigger: CCCAGACTGGCTGCAAACTCCCTCTGTACCCAACCATTCAGCTTTAAACTCCTCATCCTCGAGGCTCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR TCA 72 bp | GACACGGTCCAGACTCCCCCTGAGACACAGTCAAGATaGCAGGGCCATGCAGGTTTGTGCTTGTCTCTTTAT | + |
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Preference number: 3 (lower is better) Translates to: DTVQTPPETQSR*QGHAGLCLSLY Trigger: ATAAAGAGACAAGCACAAACCTGCATGGCCCTGTCATCTTGACTGTGTCTCAGGGGGAGTCTGGACCGTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR CCA 72 bp | TGCAGCCAGTCTGGGTTACAGGAGACATTGTCTCAATaGAAAGGGACTGGCAGTGCCTTGGGGACAAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: CSQSGLQETLSQ*KGTGSALGTKG Trigger: TCCTTTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATTGAGACAATGTCTCCTGTAACCCAGACTGGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CAA 90 bp | GGTGTTGTTGTTTGTATTTGTTTTGTTTTGTTTCTTATACAGGGCCTCATTAGGGGGACTGGCAGTGCCTaGGGGACAAAAGGACCGAGG | + |
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Preference number: 3 (lower is better) Translates to: GVVVCICFVLFLIQGLIRGTGSA*GTKGPR Trigger: CCTCGGTCCTTTTGTCCCCAAGGCACTGCCAGTCCC...CCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAACAACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR GCA 72 bp | GAGTTTAAAGCTGAATGGTTGGGTACAGAGGGAGTTTaGAGCCAGTCTGGGTTACAGGAGACATTGTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: EFKAEWLGTEGV*SQSGLQETLSQ Trigger: TTGAGACAATGTCTCCTGTAACCCAGACTGGCTGCAAACTCCCTCTGTACCCAACCATTCAGCTTTAAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CAA 90 bp | CGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATGAGGAGCATGCAGGTTTGTGCTaGTCTCTTTATTATTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: RLLRIKERVKRLSLEDEEHAGLC*SLYYCF Trigger: GAAACAATAATAAAGAGACAAGCACAAACCTGCATG...CTCCTCATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR TCA 72 bp | ATCGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTaGGCCTCGAGGATGAGGAGTTTAAAGCTGAATGGT | + |
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Preference number: 3 (lower is better) Translates to: IGFCALKKGLKG*ASRMRSLKLNG Trigger: ACCATTCAGCTTTAAACTCCTCATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CAA 90 bp | GGTGTTGTTGTTTGTATTTGTTTTGTTTTGTTTCTTATACAGGGCCTCATTAGGGGGTACAGAGGGAGTTaGCAGCCAGTCTGGGTTACA | + |
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Preference number: 3 (lower is better) Translates to: GVVVCICFVLFLIQGLIRGYRGS*QPVWVT Trigger: TGTAACCCAGACTGGCTGCAAACTCCCTCTGTACCC...CCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAACAACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CAA 90 bp | TTCTTCAATAACTCCTATACCCTTCCATTTCCCCTAACTACCTCAAATTTTCCTGTGAACAACGTTATTTaGCCTGGATCGGCTTCTGCG | + |
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Preference number: 3 (lower is better) Translates to: FFNNSYTLPFPLTTSNFPVNNVI*PGSASA Trigger: CGCAGAAGCCGATCCAGGCAAAATAACGTTGTTCAC...AGGAAAATTTGAGGTAGTTAGGGGAAATGGAAGGGTATAGGAGTTATTGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR CCA 72 bp | GCTCCCTCTGGTATTTTAATTGAGACTAAATTCCATTaGAACTGCTTATGGATAGAGGGTGGCTTGACATTC | + |
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Preference number: 3 (lower is better) Translates to: APSGILIETKFH*NCLWIEGGLTF Trigger: GAATGTCAAGCCACCCTCTATCCATAAGCAGTTCCAATGGAATTTAGTCTCAATTAAAATACCAGAGGGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CAA 90 bp | TTAATTGAGACTAAATTCCATTGGAACTGCTTATGGATAGAGGGTGGCTTGACACTTGTCTCTTTATTATaGTTTCTGTCCAGGCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: LIETKFHWNCLWIEGGLTLVSLL*FLSRPL Trigger: CAGGGGCCTGGACAGAAACAATAATAAAGAGACAAG...TGTCAAGCCACCCTCTATCCATAAGCAGTTCCAATGGAATTTAGTCTCAATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR-3UTR CAA 90 bp | TTCTTCAATAACTCCTATACCCTTCCATTTCCCCTAACTACCTCAAATTTTCCTGGGTTACAGGAGACATaGTCTCAATGGAAAGGGACT | + |
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Preference number: 3 (lower is better) Translates to: FFNNSYTLPFPLTTSNFPGLQET*SQWKGT Trigger: AGTCCCTTTCCATTGAGACAATGTCTCCTGTAACCC...AGGAAAATTTGAGGTAGTTAGGGGAAATGGAAGGGTATAGGAGTTATTGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| 3UTR CCA 72 bp | TTGTCTTTGCACTTCTGTGAACAACGTTATTTTGCCTaGATCGGCTTCTGCGCATTAAAGAAAGGGTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSLHFCEQRYFA*IGFCALKKGLK Trigger: TTTTAACCCTTTCTTTAATGCGCAGAAGCCGATCCAGGCAAAATAACGTTGTTCACAGAAGTGCAAAGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR GCA 90 bp | GAGGGGCAGGCAGGGGAGGTGGTACCCTCCCACCAACCTGAGCCCACTCTCTGCCAGCCCCGCCCGACGTaGGCGACACCTGGTACACGC | + |
|
Preference number: 4 (lower is better) Translates to: EGQAGEVVPSHQPEPTLCQPRPT*ATPGTR Trigger: GCGTGTACCAGGTGTCGCGCACGTCGGGCGGGGCTG...GCAGAGAGTGGGCTCAGGTTGGTGGGAGGGTACCACCTCCCCTGCCTGCCCCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR GCA 90 bp | CTGGATCGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATGGGCGCCGCCGAAGGTaGGGCGGTAGGAGGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: LDRLLRIKERVKRLSLEDGRRRR*GGRRTR Trigger: GCGTGTCCTCCTACCGCCGCACCTTCGGCGGCGCCC...ATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCGATCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CCA 90 bp | CTGGATCGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATTCGACCCGGGCGCGCTaGTTGGTGAGCACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LDRLLRIKERVKRLSLEDSTRAR*LVSTST Trigger: GGTGGAGGTGCTCACCAACCAGCGCGCCCGGGTCGA...ATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCGATCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR GCA 90 bp | TCAATGGAAAGGGACTGGCAGTGCCTTGGGGACAAAAGGACCGAGGGAACTTCCACTTCAGAACCCCTTTaGTCGGGGCTGGTTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SMERDWQCLGDKRTEGTSTSEPL*SGLVSR Trigger: CCGAGAAACCAGCCCCGAGCAAAGGGGTTCTGAAGT...GGAAGTTCCCTCGGTCCTTTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CCA 90 bp | CTGGATCGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATAGGACACGCGCTGGCTaGACGAGTAGGCCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDRLLRIKERVKRLSLEDRTRAG*TSRPGS Trigger: TGAGCCAGGCCTACTCGTCCAGCCAGCGCGTGTCCT...ATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCGATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| 3UTR CAA 72 bp | GAGGGAGTTTGCAGCCAGTCTGGGTTACAGGAGACATaGTCTCAATGGAAAGGGACTGGCAGTGCCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGVCSQSGLQET*SQWKGTGSALG Trigger: CCCCAAGGCACTGCCAGTCCCTTTCCATTGAGACAATGTCTCCTGTAACCCAGACTGGCTGCAAACTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR TCA 90 bp | AATGGAAAGGGACTGGCAGTGCCTTGGGGACAAAAGGACCGAGGGAACTTCCTTACGCGATCTCCTCGTTaGGGGATTCGATTCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NGKGLAVPWGQKDRGNFLTRSPR*GIRFCA Trigger: AGCGCAGAATCGAATCCCTCAACGAGGAGATCGCGT...AAGGAAGTTCCCTCGGTCCTTTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR TCA 90 bp | GGAGTTTGCAGCCAGTCTGGGTTACAGGAGACATTGTCTCAATGGAAAGGGACTAGTCGTTGGTGCCCTTaGGGGCATCAATCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVCSQSGLQETLSQWKGTSRWCP*GHQSRR Trigger: CCTGCGAGATTGATGCCCTCAAGGGCACCAACGACT...AGTCCCTTTCCATTGAGACAATGTCTCCTGTAACCCAGACTGGCTGCAAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CCA 90 bp | CTGGATCGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATGACGTGCGCGACACCTaGTACACGCGGGATGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LDRLLRIKERVKRLSLEDDVRDT*YTRDVI Trigger: AATGACATCCCGCGTGTACCAGGTGTCGCGCACGTC...ATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCGATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| 3UTR CAA 72 bp | GAGACATTGTCTCAATGGAAAGGGACTGGCAGTGCCTaGGGGACAAAAGGACCGAGGGAACTTCCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ETLSQWKGTGSA*GTKGPRELPSQ Trigger: CTGTGAAGGAAGTTCCCTCGGTCCTTTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATTGAGACAATGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR TCA 90 bp | TTCTTCAATAACTCCTATACCCTTCCATTTCCCCTAACTACCTCAAATTTTCCTGGGCGCGCTGGTTGGTaGGCACCTCCACCTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FFNNSYTLPFPLTTSNFPGRAGW*APPPGA Trigger: GGCGCCAGGTGGAGGTGCTCACCAACCAGCGCGCCC...AGGAAAATTTGAGGTAGTTAGGGGAAATGGAAGGGTATAGGAGTTATTGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR GCA 90 bp | CTGGATCGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATTCCAGCTCCCTCATCTaGCTCATCAGGGAGTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LDRLLRIKERVKRLSLEDSSSLI*LIRESL Trigger: CAACGACTCCCTGATGAGGCAGATGAGGGAGCTGGA...ATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCGATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR GCA 90 bp | GGAGTTTGCAGCCAGTCTGGGTTACAGGAGACATTGTCTCAATGGAAAGGGACTTATTCCATCATCTCCTaGTTGGCTTGGCGCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVCSQSGLQETLSQWKGTYSIIS*LAWRSA Trigger: TGCGCTGCGCCAAGCCAAGCAGGAGATGATGGAATA...AGTCCCTTTCCATTGAGACAATGTCTCCTGTAACCCAGACTGGCTGCAAACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR GCA 90 bp | AATGGAAAGGGACTGGCAGTGCCTTGGGGACAAAAGGACCGAGGGAACTTCCTTAGCACTTCATGTTGTTaGTGTGTAGCCTCGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: NGKGLAVPWGQKDRGNFLSTSCC*CVASLT Trigger: TGTCAGCGAGGCTACACAGCAACAACATGAAGTGCT...AAGGAAGTTCCCTCGGTCCTTTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTTTGCAGCCAGTCTGGGTTACAGGAGACATTGTCTCAATGGAAAGGGACTCAATACGAGCTAGAGTaGCTGCATCCACATCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVCSQSGLQETLSQWKGTQYELE*LHPHPL Trigger: GAGCGGATGTGGATGCAGCCACTCTAGCTCGTATTG...AGTCCCTTTCCATTGAGACAATGTCTCCTGTAACCCAGACTGGCTGCAAACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| 3UTR CAA 72 bp | CTTATACAGGGCCTCATTAGGAAGCAGAGGCTGGCTTaGAACCTGAAGTCTTCTGGTCCCAACCTCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQGLIRKQRLA*NLKSSGPNLLS Trigger: GCTCAAGAGGTTGGGACCAGAAGACTTCAGGTTCAAAGCCAGCCTCTGCTTCCTAATGAGGCCCTGTATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CCA 90 bp | AATGGAAAGGGACTGGCAGTGCCTTGGGGACAAAAGGACCGAGGGAACTTCCTTCATCGTTGTTCTTATTaGCTGCCTGAGTCAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGKGLAVPWGQKDRGNFLHRCSY*LPESSL Trigger: CAGACTTGACTCAGGCAGCCAATAAGAACAACGATG...AAGGAAGTTCCCTCGGTCCTTTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR GCA 90 bp | GTTGTTTGTATTTGTTTTGTTTTGTTTCTTATACAGGGCCTCATTAGGAAGCAGAGCGCGGCGTTCTGCTaGTCCAAGAAGCGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVCICFVLFLIQGLIRKQSAAFC*SKKRTF Trigger: GAAGGTGCGCTTCTTGGAGCAGCAGAACGCCGCGCT...CTGCTTCCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR TCA 90 bp | AAAGTCTTGTCTTTGCACTTCTGTGAACAACGTTATTTTGCCTGGATCGGCTTCTGCCTGAGTCAAGTCTaGAACCTTGGACTTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: KVLSLHFCEQRYFAWIGFCLSQV*NLGLVP Trigger: TGGTACAAGTCCAAGGTTTCAGACTTGACTCAGGCA...GAAGCCGATCCAGGCAAAATAACGTTGTTCACAGAAGTGCAAAGACAAGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR TCA 90 bp | AAAGTCTTGTCTTTGCACTTCTGTGAACAACGTTATTTTGCCTGGATCGGCTTCGGGTCTCAATGGTCTTaGTCATCACTGTCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KVLSLHFCEQRYFAWIGFGSQWS*SSLSFW Trigger: CCAAAAAGACAGTGATGATCAAGACCATTGAGACCC...GAAGCCGATCCAGGCAAAATAACGTTGTTCACAGAAGTGCAAAGACAAGACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR GCA 90 bp | GGTGTTGTTGTTTGTATTTGTTTTGTTTTGTTTCTTATACAGGGCCTCATTAGGTTGGCCTTGAGCCTCTaGAGGTCGTCTATCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVVVCICFVLFLIQGLIRLALSL*RSSIRL Trigger: CAACCTGATAGACGACCTGCAGAGGCTCAAGGCCAA...CCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAACAACACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CCA 90 bp | TTAATTGAGACTAAATTCCATTGGAACTGCTTATGGATAGAGGGTGGCTTGACAAGAGCAGAGAAGGTCTaGATAGGAAGGTTGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIETKFHWNCLWIEGGLTRAEKV*IGRLIL Trigger: CAGGATCAACCTTCCTATCCAGACCTTCTCTGCTCT...TGTCAAGCCACCCTCTATCCATAAGCAGTTCCAATGGAATTTAGTCTCAATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR TCA 90 bp | GGTGTTGTTGTTTGTATTTGTTTTGTTTTGTTTCTTATACAGGGCCTCATTAGGTGGTTTCTCGGAAGTTaGGAGCAGAGAAGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVVVCICFVLFLIQGLIRWFLGS*EQRRSG Trigger: TCCAGACCTTCTCTGCTCTCAACTTCCGAGAAACCA...CCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAACAACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTTGTCTTTGCACTTCTGTGAACAACGTTATTTTGCCTGGATCGGCTTCGCTTCTTCTCTTAGTTaGATTTCCTCCTGTAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVLSLHFCEQRYFAWIGFASSLS*ISSCSL Trigger: CAAACTACAGGAGGAAATCCAACTAAGAGAAGAAGC...GAAGCCGATCCAGGCAAAATAACGTTGTTCACAGAAGTGCAAAGACAAGACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTCAATAACTCCTATACCCTTCCATTTCCCCTAACTACCTCAAATTTTCCTACTGTCTTTTTGGTATaGACTTCAGAACCCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FFNNSYTLPFPLTTSNFPTVFLV*TSEPLC Trigger: GCAAAGGGGTTCTGAAGTCCATACCAAAAAGACAGT...AGGAAAATTTGAGGTAGTTAGGGGAAATGGAAGGGTATAGGAGTTATTGAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTCAATAACTCCTATACCCTTCCATTTCCCCTAACTACCTCAAATTTTCCTTCAAGTCTGAAACCTTaGACTTGTACCATTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFNNSYTLPFPLTTSNFPSSLKP*TCTILQ Trigger: CTGAAGAATGGTACAAGTCCAAGGTTTCAGACTTGA...AGGAAAATTTGAGGTAGTTAGGGGAAATGGAAGGGTATAGGAGTTATTGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| 3UTR CAA 72 bp | TCTGTTTGTTCTTGGGTGTTGTTGTTTGTATTTGTTTaGTTTTGTTTCTTATACAGGGCCTCATTAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVCSWVLLFVFV*FCFLYRASLGS Trigger: GCTTCCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAACAACACCCAAGAACAAACAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS CCA 90 bp | AGCGTCGGCCAGGGAGAAGTCCAGCAGCTCGCCCGCGCCATAGGATaGCGCTCGGGTGGTCCCCAGCCGGCTAGACCGCAGCGACCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SVGQGEVQQLARAIG*RSGGPQPARPQRPQ Trigger: TTGGGGTCGCTGCGGTCTAGCCGGCTGGGGACCACCCGAGCGCCATCCTATGGCGCGGGCGAGCTGCTGGACTTCTCCCTGGCCGACGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS TCA 90 bp | AGCCCCGCCCGACGTGCGCGACACCTGGTACACGCGGGATGTCATTaGACTCGAGGAGCCCTTGGTACCGAAGCCTGCTCGAGGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: SPARRARHLVHAGCH*TRGALGTEACSREH Trigger: GTGTTCCCTCGAGCAGGCTTCGGTACCAAGGGCTCCTCGAGTTCAATGACATCCCGCGTGTACCAGGTGTCGCGCACGTCGGGCGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS CCA 90 bp | GCGACACCTGGTACACGCGGGATGTCATTGAACTCGAGGAGCCCTTaGTACCGAAGCCTGCTCGAGGGAACACGGGAGAGCTCAGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATPGTRGMSLNSRSP*YRSLLEGTRESSAG Trigger: CCCCGCTGAGCTCTCCCGTGTTCCCTCGAGCAGGCTTCGGTACCAAGGGCTCCTCGAGTTCAATGACATCCCGCGTGTACCAGGTGTCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | TGCTCCCACATCCAGCACCTTCCGCTTCCCTCTTACAGCCCCCGCTTTCCAAGGGACTTCAGAACCCCTTaGCTCGGGGCTGGTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CSHIQHLPLPSYSPRFPRDFRTP*LGAGFS Trigger: CGAGAAACCAGCCCCGAGCAAAGGGGTTCTGAAGTC...CCTTGGAAAGCGGGGGCTGTAAGAGGGAAGCGGAAGGTGCTGGATGTGGGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | CTGGATCGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATACCCGGGCGCGCTGGTaGGTGAGCACCTCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LDRLLRIKERVKRLSLEDTRARW*VSTSTW Trigger: CCAGGTGGAGGTGCTCACCAACCAGCGCGCCCGGGT...ATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCGATCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS GCA 90 bp | TCTTCTCTTAGTTGGATTTCCTCCTGTAGTTTGGCCTTGAGCCTCTaGAGGTCGTCTATCAGGTTGTCACGCTCCACGTCGACCCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSLSWISSCSLALSL*RSSIRLSRSTSTRA Trigger: CGCCCGGGTCGACGTGGAGCGTGACAACCTGATAGACGACCTGCAGAGGCTCAAGGCCAAACTACAGGAGGAAATCCAACTAAGAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | TCAATCTCGCTGAGCATGACACTGACACAGTTCATCCCAGGGCAATGGGGGTGTACACGCGGGATGTCATaGAACTCGAGGAGCCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SISLSMTLTQFIPGQWGCTRGMS*NSRSPW Trigger: CCAAGGGCTCCTCGAGTTCAATGACATCCCGCGTGT...ACACCCCCATTGCCCTGGGATGAACTGTGTCAGTGTCATGCTCAGCGAGATTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | TCAATGGAAAGGGACTGGCAGTGCCTTGGGGACAAAAGGACCGAGGGAACTTCCAACGCGATCTCCTCGTaGAGGGATTCGATTCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SMERDWQCLGDKRTEGTSNAISS*RDSILR Trigger: GCGCAGAATCGAATCCCTCAACGAGGAGATCGCGTT...GGAAGTTCCCTCGGTCCTTTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | AATGGAAAGGGACTGGCAGTGCCTTGGGGACAAAAGGACCGAGGGAACTTCCTTGTCTGGATAGGAAGGTaGATCCTGCTCTCCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NGKGLAVPWGQKDRGNFLVWIGR*ILLSSP Trigger: GGGCGAGGAGAGCAGGATCAACCTTCCTATCCAGAC...AAGGAAGTTCCCTCGGTCCTTTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | TTAATTGAGACTAAATTCCATTGGAACTGCTTATGGATAGAGGGTGGCTTGACACGGCCCTTGAGCCGGTaGACCTCGGCGGCGAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LIETKFHWNCLWIEGGLTRPLSR*TSAASA Trigger: CGCGCTCGCCGCCGAGGTCAACCGGCTCAAGGGCCG...TGTCAAGCCACCCTCTATCCATAAGCAGTTCCAATGGAATTTAGTCTCAATTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | GTTACAGGAGACATTGTCTCAATGGAAAGGGACTGGCAGTGCCTTGGGGACAAATCCTGTAGTTTGGCCTaGAGCCTCTGCAGGTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTGDIVSMERDWQCLGDKSCSLA*SLCRSS Trigger: AGACGACCTGCAGAGGCTCAAGGCCAAACTACAGGA...TTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATTGAGACAATGTCTCCTGTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | GTTACAGGAGACATTGTCTCAATGGAAAGGGACTGGCAGTGCCTTGGGGACAAACGGAAGGCAGCCAAGTaGTTCTCTGCTTCTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VTGDIVSMERDWQCLGDKRKAAK*FSASSL Trigger: AAGAGAAGAAGCAGAGAACAACTTGGCTGCCTTCCG...TTTGTCCCCAAGGCACTGCCAGTCCCTTTCCATTGAGACAATGTCTCCTGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | TCAATCTCGCTGAGCATGACACTGACACAGTTCATCCCAGGGCAATGGGGGTGTCGGGTCTCAATGGTCTaGATCATCACTGTCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SISLSMTLTQFIPGQWGCRVSMV*IITVFL Trigger: CAAAAAGACAGTGATGATCAAGACCATTGAGACCCG...ACACCCCCATTGCCCTGGGATGAACTGTGTCAGTGTCATGCTCAGCGAGATTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | CGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATGAGGAGTTACAGCACTTCATGTaGTTGCTGTGTAGCCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLLRIKERVKRLSLEDEELQHFM*LLCSLA Trigger: AGCGAGGCTACACAGCAACAACATGAAGTGCTGTAA...CTCCTCATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | CGGCTTCTGCGCATTAAAGAAAGGGTTAAAAGGCTGAGCCTCGAGGATGAGGAGATCATCACTGTCTTTTaGGTATGGACTTCAGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: RLLRIKERVKRLSLEDEEIITVF*VWTSEP Trigger: GGGTTCTGAAGTCCATACCAAAAAGACAGTGATGAT...CTCCTCATCCTCGAGGCTCAGCCTTTTAACCCTTTCTTTAATGCGCAGAAGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | GGAGTTTGCAGCCAGTCTGGGTTACAGGAGACATTGTCTCAATGGAAAGGGACTGTCAAGTCTGAAACCTaGGACTTGTACCATTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVCSQSGLQETLSQWKGTVKSET*DLYHSS Trigger: TGAAGAATGGTACAAGTCCAAGGTTTCAGACTTGAC...AGTCCCTTTCCATTGAGACAATGTCTCCTGTAACCCAGACTGGCTGCAAACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | AAAGTCTTGTCTTTGCACTTCTGTGAACAACGTTATTTTGCCTGGATCGGCTTCCAGCACTTCATGTTGTaGCTGTGTAGCCTCGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KVLSLHFCEQRYFAWIGFQHFML*LCSLAD Trigger: GTCAGCGAGGCTACACAGCAACAACATGAAGTGCTG...GAAGCCGATCCAGGCAAAATAACGTTGTTCACAGAAGTGCAAAGACAAGACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
||
| CDS-3UTR CAA 90 bp | GTTGTTTGTATTTGTTTTGTTTTGTTTCTTATACAGGGCCTCATTAGGAAGCAGGAGTCGTTGGTGCCCTaGAGGGCATCAATCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VVCICFVLFLIQGLIRKQESLVP*RASISQ Trigger: CTGCGAGATTGATGCCCTCAAGGGCACCAACGACTC...CTGCTTCCTAATGAGGCCCTGTATAAGAAACAAAACAAAACAAATACAAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS-3UTR CAA 90 bp | TTAATTGAGACTAAATTCCATTGGAACTGCTTATGGATAGAGGGTGGCTTGACACTGGTTTCTCGGAAGTaGAGAGCAGAGAAGGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LIETKFHWNCLWIEGGLTLVSRK*RAEKVW Trigger: CCAGACCTTCTCTGCTCTCAACTTCCGAGAAACCAG...TGTCAAGCCACCCTCTATCCATAAGCAGTTCCAATGGAATTTAGTCTCAATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CAA 72 bp | TCGGCGACCCGAGTCGGTTCGCGGCCCTTGAGCCGGTaGACCTCGGCGGCGAGCGCGGCGTTCTGCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SATRVGSRPLSR*TSAASAAFCCS Trigger: GGAGCAGCAGAACGCCGCGCTCGCCGCCGAGGTCAACCGGCTCAAGGGCCGCGAACCGACTCGGGTCGCCGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CCA 72 bp | CAGGGAGAAGTCCAGCAGCTCGCCCGCGCCATAGGATaGCGCTCGGGTGGTCCCCAGCCGGCTAGACCGCAG | + |
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Preference number: 6 (lower is better) Translates to: QGEVQQLARAIG*RSGGPQPARPQ Trigger: CTGCGGTCTAGCCGGCTGGGGACCACCCGAGCGCCATCCTATGGCGCGGGCGAGCTGCTGGACTTCTCCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS GCA 72 bp | ACCGCAGCGACCCCAAGCCTCCAGCCCCGCCCGACGTaGGCGACACCTGGTACACGCGGGATGTCATTGAAC | + |
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Preference number: 6 (lower is better) Translates to: TAATPSLQPRPT*ATPGTRGMSLN Trigger: GTTCAATGACATCCCGCGTGTACCAGGTGTCGCGCACGTCGGGCGGGGCTGGAGGCTTGGGGTCGCTGCGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CCA 72 bp | CCCAAGCCTCCAGCCCCGCCCGACGTGCGCGACACCTaGTACACGCGGGATGTCATTGAACTCGAGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: PKPPAPPDVRDT*YTRDVIELEEP Trigger: GGGCTCCTCGAGTTCAATGACATCCCGCGTGTACCAGGTGTCGCGCACGTCGGGCGGGGCTGGAGGCTTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CAA 90 bp | CAGCCCCGCCCGACGTGCGCGACACCTGGTACACGCGGGATGTCATaGAACTCGAGGAGCCCTTGGTACCGAAGCCTGCTCGAGGGAACA | + |
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Preference number: 6 (lower is better) Translates to: QPRPTCATPGTRGMS*NSRSPWYRSLLEGT Trigger: TGTTCCCTCGAGCAGGCTTCGGTACCAAGGGCTCCTCGAGTTCAATGACATCCCGCGTGTACCAGGTGTCGCGCACGTCGGGCGGGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CAA 90 bp | CGCGACACCTGGTACACGCGGGATGTCATTGAACTCGAGGAGCCCTaGGTACCGAAGCCTGCTCGAGGGAACACGGGAGAGCTCAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: RDTWYTRDVIELEEP*VPKPARGNTGELSG Trigger: CCCGCTGAGCTCTCCCGTGTTCCCTCGAGCAGGCTTCGGTACCAAGGGCTCCTCGAGTTCAATGACATCCCGCGTGTACCAGGTGTCGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CAA 90 bp | TCCTCCTGTAGTTTGGCCTTGAGCCTCTGCAGGTCGTCTATCAGGTaGTCACGCTCCACGTCGACCCGGGCGCGCTGGTTGGTGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: SSCSLALSLCRSSIR*SRSTSTRARWLVST Trigger: GGTGCTCACCAACCAGCGCGCCCGGGTCGACGTGGAGCGTGACAACCTGATAGACGACCTGCAGAGGCTCAAGGCCAAACTACAGGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS TCA 72 bp | CGACGTGCGCGACACCTGGTACACGCGGGATGTCATTaGACTCGAGGAGCCCTTGGTACCGAAGCCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: RRARHLVHAGCH*TRGALGTEACS Trigger: CGAGCAGGCTTCGGTACCAAGGGCTCCTCGAGTTCAATGACATCCCGCGTGTACCAGGTGTCGCGCACGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CAA 72 bp | CCGACGTGCGCGACACCTGGTACACGCGGGATGTCATaGAACTCGAGGAGCCCTTGGTACCGAAGCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: PTCATPGTRGMS*NSRSPWYRSLL Trigger: GAGCAGGCTTCGGTACCAAGGGCTCCTCGAGTTCAATGACATCCCGCGTGTACCAGGTGTCGCGCACGTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CAA 72 bp | AGTTTGGCCTTGAGCCTCTGCAGGTCGTCTATCAGGTaGTCACGCTCCACGTCGACCCGGGCGCGCTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SLALSLCRSSIR*SRSTSTRARWL Trigger: CAACCAGCGCGCCCGGGTCGACGTGGAGCGTGACAACCTGATAGACGACCTGCAGAGGCTCAAGGCCAAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CCA 72 bp | GGTACACGCGGGATGTCATTGAACTCGAGGAGCCCTTaGTACCGAAGCCTGCTCGAGGGAACACGGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GTRGMSLNSRSP*YRSLLEGTRES Trigger: GCTCTCCCGTGTTCCCTCGAGCAGGCTTCGGTACCAAGGGCTCCTCGAGTTCAATGACATCCCGCGTGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CCA 72 bp | CCTCCTCCAGGCGCGCAATGTTGTCCTGATAGCCATTaGCCTCGCTGGCAAAGCGATCCTCCAGCTCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PPPGAQCCPDSH*PRWQSDPPAPS Trigger: TGAGGGAGCTGGAGGATCGCTTTGCCAGCGAGGCCAATGGCTATCAGGACAACATTGCGCGCCTGGAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CAA 72 bp | TGGTACACGCGGGATGTCATTGAACTCGAGGAGCCCTaGGTACCGAAGCCTGCTCGAGGGAACACGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: WYTRDVIELEEP*VPKPARGNTGE Trigger: CTCTCCCGTGTTCCCTCGAGCAGGCTTCGGTACCAAGGGCTCCTCGAGTTCAATGACATCCCGCGTGTACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CCA 72 bp | GGGCTGGTTTCTCGGAAGTTGAGAGCAGAGAAGGTCTaGATAGGAAGGTTGATCCTGCTCTCCTCGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GLVSRKLRAEKV*IGRLILLSSPS Trigger: GGAGGGCGAGGAGAGCAGGATCAACCTTCCTATCCAGACCTTCTCTGCTCTCAACTTCCGAGAAACCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CCA 72 bp | ATTCGATTCTGCGCTCCAGGTCAATACGAGCTAGAGTaGCTGCATCCACATCCGCTCGGAAGGCAGCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: IRFCAPGQYELE*LHPHPLGRQPS Trigger: ACTTGGCTGCCTTCCGAGCGGATGTGGATGCAGCCACTCTAGCTCGTATTGACCTGGAGCGCAGAATCGAAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS GCA 72 bp | AGTTGGATTTCCTCCTGTAGTTTGGCCTTGAGCCTCTaGAGGTCGTCTATCAGGTTGTCACGCTCCACGTCG | + |
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Preference number: 6 (lower is better) Translates to: SWISSCSLALSL*RSSIRLSRSTS Trigger: CGACGTGGAGCGTGACAACCTGATAGACGACCTGCAGAGGCTCAAGGCCAAACTACAGGAGGAAATCCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CCA 72 bp | CCTGCTTGGCTTGGCGCAGCGCATCGTTGTTCTTATTaGCTGCCTGAGTCAAGTCTGAAACCTTGGACTTGT | + |
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Preference number: 6 (lower is better) Translates to: PAWLGAAHRCSY*LPESSLKPWTC Trigger: ACAAGTCCAAGGTTTCAGACTTGACTCAGGCAGCCAATAAGAACAACGATGCGCTGCGCCAAGCCAAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS TCA 72 bp | CTTCTCTTAGTTGGATTTCCTCCTGTAGTTTGGCCTTaGGCCTCTGCAGGTCGTCTATCAGGTTGTCACGCT | + |
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Preference number: 6 (lower is better) Translates to: LLLVGFPPVVWP*ASAGRLSGCHA Trigger: AGCGTGACAACCTGATAGACGACCTGCAGAGGCTCAAGGCCAAACTACAGGAGGAAATCCAACTAAGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS TCA 72 bp | GCTTGGCGCAGCGCATCGTTGTTCTTATTGGCTGCCTaGGTCAAGTCTGAAACCTTGGACTTGTACCATTCT | + |
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Preference number: 6 (lower is better) Translates to: AWRSASLFLLAA*VKSETLDLYHS Trigger: AGAATGGTACAAGTCCAAGGTTTCAGACTTGACTCAGGCAGCCAATAAGAACAACGATGCGCTGCGCCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CAA 72 bp | TCTTCTCTTAGTTGGATTTCCTCCTGTAGTTTGGCCTaGAGCCTCTGCAGGTCGTCTATCAGGTTGTCACGC | + |
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Preference number: 6 (lower is better) Translates to: SSLSWISSCSLA*SLCRSSIRLSR Trigger: GCGTGACAACCTGATAGACGACCTGCAGAGGCTCAAGGCCAAACTACAGGAGGAAATCCAACTAAGAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CCA 72 bp | AAGGCAGCCAAGTTGTTCTCTGCTTCTTCTCTTAGTTaGATTTCCTCCTGTAGTTTGGCCTTGAGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KAAKLFSASSLS*ISSCSLALSLC Trigger: GCAGAGGCTCAAGGCCAAACTACAGGAGGAAATCCAACTAAGAGAAGAAGCAGAGAACAACTTGGCTGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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| CDS CAA 72 bp | TCTTCATGCACTTTCTTAAGGAACGCGATCTCCTCGTaGAGGGATTCGATTCTGCGCTCCAGGTCAATACGA | + |
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Preference number: 6 (lower is better) Translates to: SSCTFLRNAISS*RDSILRSRSIR Trigger: TCGTATTGACCTGGAGCGCAGAATCGAATCCCTCAACGAGGAGATCGCGTTCCTTAAGAAAGTGCATGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027409.10 |
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