Pregenerated sensors for DERL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009092Ensembl transcript IDs: ENSMUST00000009236.6, ENSMUST00000217811.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCAGTCCGGGACCTCTCTGGGCCCTGTGTCCTGTCATTACCGCTaGGCAGAGATGGTACAGGGAAGTGGAGGGTGTTGCTGGCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: RQSGTSLGPVSCHYR*AEMVQGSGGCCWPR Trigger: CCTCGGCCAGCAACACCCTCCACTTCCCTGTACCATCTCTGCTCAGCGGTAATGACAGGACACAGGGCCCAGAGAGGTCCCGGACTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR CCA 90 bp | AAGCTAGGTAGGAAGGCCTGCACAGGCCTTCCGCTACAAGGCAAATaGAAGGAATGTCCCAGATCTACCTCCACTGTACACGGCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: KLGRKACTGLPLQGK*KECPRSTSTVHGCC Trigger: GCAGCAGCCGTGTACAGTGGAGGTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCCTTCCTACCTAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR GCA 90 bp | GGCAAATGGAAGGAATGTCCCAGATCTACCTCCACTGTACACGGCTaGTGCTTAAATAGAGCTCAAGGCCCTGGGCTCACTAGCATGGCA | + |
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Preference number: 1 (lower is better) Translates to: GKWKECPRSTSTVHG*CLNRAQGPGLTSMA Trigger: TGCCATGCTAGTGAGCCCAGGGCCTTGAGCTCTATTTAAGCAGCAGCCGTGTACAGTGGAGGTAGATCTGGGACATTCCTTCCATTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR GCA 90 bp | CGTGGGGCACATGTAGAGCAACAAAGAAAGCTAGGTAGGAAGGCCTaGACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: RGAHVEQQRKLGRKA*TGLPLQGKWKECPR Trigger: TCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCCTTCCTACCTAGCTTTCTTTGTTGCTCTACATGTGCCCCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR CAA 90 bp | CTGTCATTACCGCTGAGCAGAGATGGTACAGGGAAGTGGAGGGTGTaGCTGGCCGAGGTGGGCTGCTCAGCTGGAGCTGAGGTGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LSLPLSRDGTGKWRV*LAEVGCSAGAEVEG Trigger: TCCCTCCACCTCAGCTCCAGCTGAGCAGCCCACCTCGGCCAGCAACACCCTCCACTTCCCTGTACCATCTCTGCTCAGCGGTAATGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTGCAGGCAGTCCGGGACCTCTCTGGGCCCTGTGTCCTGTCATTACCGCTGGATGGTACAGGGAAGTaGAGGGTGTTGCTGGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: HLQAVRDLSGPCVLSLPLDGTGK*RVLLAE Trigger: CTCGGCCAGCAACACCCTCCACTTCCCTGTACCATC...CAGCGGTAATGACAGGACACAGGGCCCAGAGAGGTCCCGGACTGCCTGCAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR CAA 90 bp | GCTAGGGGGTGGCATCAGCCCAGAGGCACCACGGTGGGATTCCTGTaGACTGGGCTGAGGTCTCCATGGAGGCATAGGCAATGTGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: ARGWHQPRGTTVGFL*TGLRSPWRHRQCEG Trigger: ACCTTCACATTGCCTATGCCTCCATGGAGACCTCAGCCCAGTCAACAGGAATCCCACCGTGGTGCCTCTGGGCTGATGCCACCCCCTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCTACCCTGGCCGAGGTGGGCTaGTCAGCTGGAGCTGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ACTGLPLQGKWKECPRSTLAEVG*SAGAEV Trigger: CACCTCAGCTCCAGCTGAGCAGCCCACCTCGGCCAG...GGTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGGCTTGTCCTCTGCACCTGAGACCATGGGACCTGTGTGTCACCAGCTGGAGTCCGGGACCTCTCTaGGCCCTGTGTCCTGTCATT | + |
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Preference number: 2 (lower is better) Translates to: GQACPLHLRPWDLCVTSWSPGPL*ALCPVI Trigger: AATGACAGGACACAGGGCCCAGAGAGGTCCCGGACT...CCAGCTGGTGACACACAGGTCCCATGGTCTCAGGTGCAGAGGACAAGCCTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR TCA 90 bp | CGGGACCTCTCTGGGCCCTGTGTCCTGTCATTACCGCTGAGCAGAGATGGTACACTGCTCAGCTGGAGCTaGGGTGGAGGGAAGGATAGA | + |
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Preference number: 2 (lower is better) Translates to: RDLSGPCVLSLPLSRDGTLLSWS*GGGKDR Trigger: TCTATCCTTCCCTCCACCTCAGCTCCAGCTGAGCAG...TGTACCATCTCTGCTCAGCGGTAATGACAGGACACAGGGCCCAGAGAGGTCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCTACGGAAGTGGAGGGTGTTaGTGGCCGAGGTGGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GLHRPSATRQMEGMSQIYGSGGC*WPRWAA Trigger: AGCAGCCCACCTCGGCCAGCAACACCCTCCACTTCC...GTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGTAGGAAGGCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTTGTTGCTGGCCGAGGTaGGCTGCTCAGCTGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LGRKACTGLPLQGKWKECCCWPR*AAQLEL Trigger: CAGCTCCAGCTGAGCAGCCCACCTCGGCCAGCAACA...ACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCCTTCCTACCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCTACCAGAGTGCTGTCAGAGTaGGCTTCCTGCTCCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: ACTGLPLQGKWKECPRSTRVLSE*ASCSRS Trigger: GCTCCTGGAGCAGGAAGCCCACTCTGACAGCACTCT...GGTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCTACAGTCCGGGACCTCTCTaGGCCCTGTGTCCTGTCATT | + |
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Preference number: 2 (lower is better) Translates to: GLHRPSATRQMEGMSQIYSPGPL*ALCPVI Trigger: AATGACAGGACACAGGGCCCAGAGAGGTCCCGGACT...GTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCTACCTGCACCTGAGACCATaGGACCTGTGTGTCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: GLHRPSATRQMEGMSQIYLHLRP*DLCVTS Trigger: GCTGGTGACACACAGGTCCCATGGTCTCAGGTGCAG...GTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR TCA 90 bp | GACTTGCTTGCTTTAAATGAAGACAGGCTAGGGGGTGGCATCAGCCCAGAGGCACTGCTCAGCTGGAGCTaGGGTGGAGGGAAGGATAGA | + |
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Preference number: 2 (lower is better) Translates to: DLLALNEDRLGGGISPEALLSWS*GGGKDR Trigger: TCTATCCTTCCCTCCACCTCAGCTCCAGCTGAGCAG...TGCCTCTGGGCTGATGCCACCCCCTAGCCTGTCTTCATTTAAAGCAAGCAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR CCA 90 bp | TACAAGGCAAATGGAAGGAATGTCCCAGATCTACCTCCACTGTACACGGCTGCTTGTTGCTGGCCGAGGTaGGCTGCTCAGCTGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: YKANGRNVPDLPPLYTAACCWPR*AAQLEL Trigger: CAGCTCCAGCTGAGCAGCCCACCTCGGCCAGCAACA...AGCAGCCGTGTACAGTGGAGGTAGATCTGGGACATTCCTTCCATTTGCCTTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCTACCTCCTGTCATTACCGCTaGGCAGAGATGGTACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: ACTGLPLQGKWKECPRSTSCHYR*AEMVQG Trigger: TCCCTGTACCATCTCTGCTCAGCGGTAATGACAGGA...GGTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATTCCTGTCATTACCGCTaGGCAGAGATGGTACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GRPAQAFRYKANGRNVPDSCHYR*AEMVQG Trigger: TCCCTGTACCATCTCTGCTCAGCGGTAATGACAGGA...ATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCTACCGGGCTGAGGTCTCCATaGAGGCATAGGCAATGTGAA | + |
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Preference number: 2 (lower is better) Translates to: ACTGLPLQGKWKECPRSTGLRSP*RHRQCE Trigger: TTCACATTGCCTATGCCTCCATGGAGACCTCAGCCC...GGTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCCCTAGTTCAGAACTCTaGTCAGCATCTGCAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: EGLHRPSATRQMEGMSQIPSSEL*SASAGS Trigger: ACTGCCTGCAGATGCTGAGCAGAGTTCTGAACTAGG...GATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR CCA 90 bp | TACAAGGCAAATGGAAGGAATGTCCCAGATCTACCTCCACTGTACACGGCTGCTAGAGTGCTGTCAGAGTaGGCTTCCTGCTCCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: YKANGRNVPDLPPLYTAARVLSE*ASCSRS Trigger: GCTCCTGGAGCAGGAAGCCCACTCTGACAGCACTCT...AGCAGCCGTGTACAGTGGAGGTAGATCTGGGACATTCCTTCCATTTGCCTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCTACCACCAGCTGGAGAAGGTaGAGACTTGCTTGCTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: ACTGLPLQGKWKECPRSTTSWRR*RLACFK Trigger: TTTAAAGCAAGCAAGTCTTCACCTTCTCCAGCTGGT...GGTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR TCA 72 bp | GGGACCTCTCTGGGCCCTGTGTCCTGTCATTACCGCTaGGCAGAGATGGTACAGGGAAGTGGAGGGTGTTGC | + |
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Preference number: 3 (lower is better) Translates to: GTSLGPVSCHYR*AEMVQGSGGCC Trigger: GCAACACCCTCCACTTCCCTGTACCATCTCTGCTCAGCGGTAATGACAGGACACAGGGCCCAGAGAGGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR CCA 72 bp | TGGGCCCTGTGTCCTGTCATTACCGCTGAGCAGAGATaGTACAGGGAAGTGGAGGGTGTTGCTGGCCGAGGT | + |
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Preference number: 3 (lower is better) Translates to: WALCPVITAEQR*YREVEGVAGRG Trigger: ACCTCGGCCAGCAACACCCTCCACTTCCCTGTACCATCTCTGCTCAGCGGTAATGACAGGACACAGGGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR TCA 72 bp | CTAGCATGGCAGAGGGTCAGGCTTGTCCTCTGCACCTaGGACCATGGGACCTGTGTGTCACCAGCTGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: LAWQRVRLVLCT*DHGTCVSPAGE Trigger: TTCTCCAGCTGGTGACACACAGGTCCCATGGTCTCAGGTGCAGAGGACAAGCCTGACCCTCTGCCATGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR CCA 72 bp | ACGGTGGGATTCCTGTTGACTGGGCTGAGGTCTCCATaGAGGCATAGGCAATGTGAAGGTGAGGCCTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: TVGFLLTGLRSP*RHRQCEGEACG Trigger: CCCACAGGCCTCACCTTCACATTGCCTATGCCTCCATGGAGACCTCAGCCCAGTCAACAGGAATCCCACCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGGCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCACGGTGGGATTCCTGTaGACTGGGCTGAGGTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: EGLHRPSATRQMEGMSQITVGFL*TGLRSP Trigger: TGGAGACCTCAGCCCAGTCAACAGGAATCCCACCGT...GATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR CCA 72 bp | AGGAAGGCCTGCACAGGCCTTCCGCTACAAGGCAAATaGAAGGAATGTCCCAGATCTACCTCCACTGTACAC | + |
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Preference number: 3 (lower is better) Translates to: RKACTGLPLQGK*KECPRSTSTVH Trigger: GTGTACAGTGGAGGTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR CAA 72 bp | CCGCTGAGCAGAGATGGTACAGGGAAGTGGAGGGTGTaGCTGGCCGAGGTGGGCTGCTCAGCTGGAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PLSRDGTGKWRV*LAEVGCSAGAE Trigger: CTCAGCTCCAGCTGAGCAGCCCACCTCGGCCAGCAACACCCTCCACTTCCCTGTACCATCTCTGCTCAGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR GCA 90 bp | GGTCAGGCTTGTCCTCTGCACCTGAGACCATGGGACCTGTGTGTCACCAGCTGGGAGCTCCAGCTGCACTaGGGCCGTGGTGAGGACGCA | + |
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Preference number: 4 (lower is better) Translates to: GQACPLHLRPWDLCVTSWELQLH*GRGEDA Trigger: TGCGTCCTCACCACGGCCGCAGTGCAGCTGGAGCTC...CCAGCTGGTGACACACAGGTCCCATGGTCTCAGGTGCAGAGGACAAGCCTGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009236.6 |
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| CDS-3UTR TCA 90 bp | GGTCAGGCTTGTCCTCTGCACCTGAGACCATGGGACCTGTGTGTCACCAGCTGGAAGTTGACCCTCACGTaGGGGCTGCGACGGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: GQACPLHLRPWDLCVTSWKLTLT*GLRRLH Trigger: ATGGAGCCGTCGCAGCCCTCACGTGAGGGTCAACTT...CCAGCTGGTGACACACAGGTCCCATGGTCTCAGGTGCAGAGGACAAGCCTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR TCA 90 bp | AGATGGTACAGGGAAGTGGAGGGTGTTGCTGGCCGAGGTGGGCTGCTCAGCTGGGTAAGCCGAAGAAGTTaGCCCTCACGTGAGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RWYREVEGVAGRGGLLSWVSRRS*PSREGC Trigger: GCAGCCCTCACGTGAGGGTCAACTTCTTCGGCTTAC...CCAGCTGAGCAGCCCACCTCGGCCAGCAACACCCTCCACTTCCCTGTACCATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR GCA 90 bp | GCTGAGCAGAGATGGTACAGGGAAGTGGAGGGTGTTGCTGGCCGAGGTGGGCTGTCAGCAGCAGTCTCTTaGCTCCGGGCTGGTTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: AEQRWYREVEGVAGRGGLSAAVS*LRAGWE Trigger: TTCCCAACCAGCCCGGAGGCAAGAGACTGCTGCTGA...CAGCCCACCTCGGCCAGCAACACCCTCCACTTCCCTGTACCATCTCTGCTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR CCA 90 bp | CATCTGCAGGCAGTCCGGGACCTCTCTGGGCCCTGTGTCCTGTCATTACCGCTGGCAGCTTCAACACGCTaGGGGTCAGCAGCAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HLQAVRDLSGPCVLSLPLAASTR*GSAAVS Trigger: AGAGACTGCTGCTGACCCCCAGCGTGTTGAAGCTGC...CAGCGGTAATGACAGGACACAGGGCCCAGAGAGGTCCCGGACTGCCTGCAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR CCA 90 bp | GCTGAGCAGAGATGGTACAGGGAAGTGGAGGGTGTTGCTGGCCGAGGTGGGCTGCTCTTGCCTCCGGGCTaGTTGGGAAAGACGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AEQRWYREVEGVAGRGGLLLPPG*LGKTSS Trigger: AGAAGACGTCTTTCCCAACCAGCCCGGAGGCAAGAG...CAGCCCACCTCGGCCAGCAACACCCTCCACTTCCCTGTACCATCTCTGCTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| 3UTR CAA 72 bp | TGGCATCAGCCCAGAGGCACCACGGTGGGATTCCTGTaGACTGGGCTGAGGTCTCCATGGAGGCATAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: WHQPRGTTVGFL*TGLRSPWRHRQ Trigger: TTGCCTATGCCTCCATGGAGACCTCAGCCCAGTCAACAGGAATCCCACCGTGGTGCCTCTGGGCTGATGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR GCA 90 bp | GCCCAGAGGCACCACGGTGGGATTCCTGTTGACTGGGCTGAGGTCTCCATGGAGAAACGAAGTCAGCCTTaGGGCCACGGAAAGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: AQRHHGGIPVDWAEVSMEKRSQP*GHGKNP Trigger: AGGGTTCTTTCCGTGGCCGCAAGGCTGACTTCGTTT...CTCCATGGAGACCTCAGCCCAGTCAACAGGAATCCCACCGTGGTGCCTCTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGAGGCACCACGGTGGGATTCCTGTTGACTGGGCTGAGGTCTCCATGGAGGGCAGGAATGGTGCCTaGAAGTTGAGTAAGCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: AQRHHGGIPVDWAEVSMEGRNGA*KLSKPK Trigger: CTTCGGCTTACTCAACTTCCAGGCACCATTCCTGCC...CTCCATGGAGACCTCAGCCCAGTCAACAGGAATCCCACCGTGGTGCCTCTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR TCA 90 bp | CTGTTGACTGGGCTGAGGTCTCCATGGAGGCATAGGCAATGTGAAGGTGAGGCCAGACCAGCATGGCCATaGGGGCCTGTCCCAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LLTGLRSPWRHRQCEGEARPAWP*GPVPGK Trigger: TTTTCCTGGGACAGGCCCTCATGGCCATGCTGGTCT...GGCCTCACCTTCACATTGCCTATGCCTCCATGGAGACCTCAGCCCAGTCAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR TCA 90 bp | GGCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCTACAAGTTGACCCTCACGTaGGGGCTGCGACGGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: GLHRPSATRQMEGMSQIYKLTLT*GLRRLH Trigger: ATGGAGCCGTCGCAGCCCTCACGTGAGGGTCAACTT...GTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR TCA 90 bp | CTGTTGACTGGGCTGAGGTCTCCATGGAGGCATAGGCAATGTGAAGGTGAGGCCGTAAGCCGAAGAAGTTaGCCCTCACGTGAGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLTGLRSPWRHRQCEGEAVSRRS*PSREGC Trigger: GCAGCCCTCACGTGAGGGTCAACTTCTTCGGCTTAC...GGCCTCACCTTCACATTGCCTATGCCTCCATGGAGACCTCAGCCCAGTCAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR GCA 90 bp | GTGGAGGGAAGGATAGAGTGCTGTCAGAGTGGGCTTCCTGCTCCAGGAGCTGCAAAACGAAGTCAGCCTTaGGGCCACGGAAAGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: VEGRIECCQSGLPAPGAAKRSQP*GHGKNP Trigger: AGGGTTCTTTCCGTGGCCGCAAGGCTGACTTCGTTT...TGCAGCTCCTGGAGCAGGAAGCCCACTCTGACAGCACTCTATCCTTCCCTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR CCA 90 bp | CTGTTGACTGGGCTGAGGTCTCCATGGAGGCATAGGCAATGTGAAGGTGAGGCCATGAGCCTCCAGACCTaGAACTTCCGGAACACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLTGLRSPWRHRQCEGEAMSLQT*NFRNTR Trigger: CCTGGTGTTCCGGAAGTTCCAGGTCTGGAGGCTCAT...GGCCTCACCTTCACATTGCCTATGCCTCCATGGAGACCTCAGCCCAGTCAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR TCA 90 bp | AGAGATGGTACAGGGAAGTGGAGGGTGTTGCTGGCCGAGGTGGGCTGCTCAGCTCACCGAAGAGAAACATaGAAACGAAGTCAGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RDGTGKWRVLLAEVGCSAHRRET*KRSQPC Trigger: GCAAGGCTGACTTCGTTTTCATGTTTCTCTTCGGTG...AGCTGAGCAGCCCACCTCGGCCAGCAACACCCTCCACTTCCCTGTACCATCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR GCA 90 bp | CAAAGAAAGCTAGGTAGGAAGGCCTGCACAGGCCTTCCGCTACAAGGCAAATGGTCAGCAGCAGTCTCTTaGCTCCGGGCTGGTTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: QRKLGRKACTGLPLQGKWSAAVS*LRAGWE Trigger: TTCCCAACCAGCCCGGAGGCAAGAGACTGCTGCTGA...CCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCCTTCCTACCTAGCTTTCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR CCA 90 bp | GCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCTACCATGAGCCTCCAGACCTaGAACTTCCGGAACACCAGG | + |
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Preference number: 4 (lower is better) Translates to: ACTGLPLQGKWKECPRSTMSLQT*NFRNTR Trigger: CCTGGTGTTCCGGAAGTTCCAGGTCTGGAGGCTCAT...GGTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR CCA 90 bp | CCCTGTGTCCTGTCATTACCGCTGAGCAGAGATGGTACAGGGAAGTGGAGGGTGGGCAGGAATGGTGCCTaGAAGTTGAGTAAGCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: PCVLSLPLSRDGTGKWRVGRNGA*KLSKPK Trigger: CTTCGGCTTACTCAACTTCCAGGCACCATTCCTGCC...CACCCTCCACTTCCCTGTACCATCTCTGCTCAGCGGTAATGACAGGACACAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR CCA 90 bp | GCTGGAGAAGGTGAAGACTTGCTTGCTTTAAATGAAGACAGGCTAGGGGGTGGCGCAGCTTCAACACGCTaGGGGTCAGCAGCAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: AGEGEDLLALNEDRLGGGAASTR*GSAAVS Trigger: AGAGACTGCTGCTGACCCCCAGCGTGTTGAAGCTGC...GCCACCCCCTAGCCTGTCTTCATTTAAAGCAAGCAAGTCTTCACCTTCTCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR TCA 90 bp | CCCTGTGTCCTGTCATTACCGCTGAGCAGAGATGGTACAGGGAAGTGGAGGGTGCACCGAAGAGAAACATaGAAACGAAGTCAGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PCVLSLPLSRDGTGKWRVHRRET*KRSQPC Trigger: GCAAGGCTGACTTCGTTTTCATGTTTCTCTTCGGTG...CACCCTCCACTTCCCTGTACCATCTCTGCTCAGCGGTAATGACAGGACACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR TCA 90 bp | GCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTCCCAGATCTACCACACGAAGAGCATGTTaGAAAAGAAGCCGAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: ACTGLPLQGKWKECPRSTTRRAC*KRSRIP Trigger: TGGGATTCGGCTTCTTTTTCAACATGCTCTTCGTGT...GGTAGATCTGGGACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR TCA 90 bp | GCTGGAGAAGGTGAAGACTTGCTTGCTTTAAATGAAGACAGGCTAGGGGGTGGCACACGAAGAGCATGTTaGAAAAGAAGCCGAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: AGEGEDLLALNEDRLGGGTRRAC*KRSRIP Trigger: TGGGATTCGGCTTCTTTTTCAACATGCTCTTCGTGT...GCCACCCCCTAGCCTGTCTTCATTTAAAGCAAGCAAGTCTTCACCTTCTCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR CAA 90 bp | GCTGAGCAGAGATGGTACAGGGAAGTGGAGGGTGTTGCTGGCCGAGGTGGGCTGTCTGTGACAACCGAGTaGCCCAGCAGCAGCGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: AEQRWYREVEGVAGRGGLSVTTE*PSSSEK Trigger: CTTCTCGCTGCTGCTGGGCAACTCGGTTGTCACAGA...CAGCCCACCTCGGCCAGCAACACCCTCCACTTCCCTGTACCATCTCTGCTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR CAA 90 bp | CCCTGTGTCCTGTCATTACCGCTGAGCAGAGATGGTACAGGGAAGTGGAGGGTGTCTGTGACAACCGAGTaGCCCAGCAGCAGCGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: PCVLSLPLSRDGTGKWRVSVTTE*PSSSEK Trigger: CTTCTCGCTGCTGCTGGGCAACTCGGTTGTCACAGA...CACCCTCCACTTCCCTGTACCATCTCTGCTCAGCGGTAATGACAGGACACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR CAA 90 bp | CTAGGTAGGAAGGCCTGCACAGGCCTTCCGCTACAAGGCAAATGGAAGGAATGTGTCAGCAGCAGTCTCTaGCCTCCGGGCTGGTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LGRKACTGLPLQGKWKECVSSSL*PPGWLG Trigger: TCCCAACCAGCCCGGAGGCAAGAGACTGCTGCTGAC...ACATTCCTTCCATTTGCCTTGTAGCGGAAGGCCTGTGCAGGCCTTCCTACCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS-3UTR CAA 90 bp | GACTTGCTTGCTTTAAATGAAGACAGGCTAGGGGGTGGCATCAGCCCAGAGGCAGTCAGCAGCAGTCTCTaGCCTCCGGGCTGGTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: DLLALNEDRLGGGISPEAVSSSL*PPGWLG Trigger: TCCCAACCAGCCCGGAGGCAAGAGACTGCTGCTGAC...TGCCTCTGGGCTGATGCCACCCCCTAGCCTGTCTTCATTTAAAGCAAGCAAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS CCA 90 bp | TCAACACGCTGGGGGTCAGCAGCAGTCTCTTGCCTCCGGGCTGGTTaGGAAAGACGTCTTCTAGGAAGTAGTAGATGTGGCCCACAAGGA | + |
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Preference number: 5 (lower is better) Translates to: STRWGSAAVSCLRAG*ERRLLGSSRCGPQG Trigger: TCCTTGTGGGCCACATCTACTACTTCCTAGAAGACGTCTTTCCCAACCAGCCCGGAGGCAAGAGACTGCTGCTGACCCCCAGCGTGTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS GCA 90 bp | CATCTAGTAGCAGCTTCAACACGCTGGGGGTCAGCAGCAGTCTCTTaGCTCCGGGCTGGTTGGGAAAGACGTCTTCTAGGAAGTAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: HLVAASTRWGSAAVS*LRAGWERRLLGSSR Trigger: TCTACTACTTCCTAGAAGACGTCTTTCCCAACCAGCCCGGAGGCAAGAGACTGCTGCTGACCCCCAGCGTGTTGAAGCTGCTACTAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS GCA 72 bp | GCAGCTTCAACACGCTGGGGGTCAGCAGCAGTCTCTTaGCTCCGGGCTGGTTGGGAAAGACGTCTTCTAGGA | + |
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Preference number: 6 (lower is better) Translates to: AASTRWGSAAVS*LRAGWERRLLG Trigger: TCCTAGAAGACGTCTTTCCCAACCAGCCCGGAGGCAAGAGACTGCTGCTGACCCCCAGCGTGTTGAAGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS CAA 72 bp | AGCAGCTTCAACACGCTGGGGGTCAGCAGCAGTCTCTaGCCTCCGGGCTGGTTGGGAAAGACGTCTTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SSFNTLGVSSSL*PPGWLGKTSSR Trigger: CCTAGAAGACGTCTTTCCCAACCAGCCCGGAGGCAAGAGACTGCTGCTGACCCCCAGCGTGTTGAAGCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS CCA 72 bp | TGGGGGTCAGCAGCAGTCTCTTGCCTCCGGGCTGGTTaGGAAAGACGTCTTCTAGGAAGTAGTAGATGTGGC | + |
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Preference number: 6 (lower is better) Translates to: WGSAAVSCLRAG*ERRLLGSSRCG Trigger: GCCACATCTACTACTTCCTAGAAGACGTCTTTCCCAACCAGCCCGGAGGCAAGAGACTGCTGCTGACCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS TCA 72 bp | CCAGCATGCGGCAGTAGCGGAACACGAAGAGCATGTTaGAAAAGAAGCCGAATCCCAGGGGCCCGAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: PACGSSGTRRAC*KRSRIPGARRR Trigger: TCTTCTTCGGGCCCCTGGGATTCGGCTTCTTTTTCAACATGCTCTTCGTGTTCCGCTACTGCCGCATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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| CDS CAA 72 bp | ACACCACCGAAGAGAAACATGAAAACGAAGTCAGCCTaGCGGCCACGGAAAGAACCCTCCTCCAGCATGCGG | + |
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Preference number: 6 (lower is better) Translates to: TPPKRNMKTKSA*RPRKEPSSSMR Trigger: CCGCATGCTGGAGGAGGGTTCTTTCCGTGGCCGCAAGGCTGACTTCGTTTTCATGTTTCTCTTCGGTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009236.6 ENSMUST00000217811.2 |
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