Pregenerated sensors for DERL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018442Ensembl transcript IDs: ENSMUST00000018586.6, ENSMUST00000108523.10, ENSMUST00000131340.2, ENSMUST00000132198.8, ENSMUST00000143850.8, ENSMUST00000171041.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGGAGCACCCGCCTGTGCCACTGAGCTCAAGTACCCATGGACTTaGTCACGGCACAGGCAGGGTGCCTGGGTCTCCAGTTTTTGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: GGAPACATELKYPWT*SRHRQGAWVSSFWL Trigger: GAGCCAAAAACTGGAGACCCAGGCACCCTGCCTGTGCCGTGAGCAAGTCCATGGGTACTTGAGCTCAGTGGCACAGGCGGGTGCTCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| 3UTR CCA 90 bp | AGAGGAGGAGGAGCACCCGCCTGTGCCACTGAGCTCAAGTACCCATaGACTTGCTCACGGCACAGGCAGGGTGCCTGGGTCTCCAGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: RGGGAPACATELKYP*TCSRHRQGAWVSSF Trigger: AAAACTGGAGACCCAGGCACCCTGCCTGTGCCGTGAGCAAGTCCATGGGTACTTGAGCTCAGTGGCACAGGCGGGTGCTCCTCCTCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| 3UTR TCA 90 bp | GAACCAGGCCCTTGGCCCTGGAAGGGTCTTGAGCTTTTCTTGAAATaGATGACAAGAGGAACACATGCCCAATGCTGCCCATTCTTATTC | + |
|
Preference number: 1 (lower is better) Translates to: EPGPWPWKGLELFLK*MTRGTHAQCCPFLF Trigger: GAATAAGAATGGGCAGCATTGGGCATGTGTTCCTCTTGTCATTCATTTCAAGAAAAGCTCAAGACCCTTCCAGGGCCAAGGGCCTGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 90 bp | CAGTTGCTTTTGGTTTATAGCTGGCTTCTCTACAGTCAGATTCCTTaGCTACAAGAAATTACCCTCCCTTCTCCCTCCTCCTGTGGTCTA | + |
|
Preference number: 1 (lower is better) Translates to: QLLLVYSWLLYSQIP*LQEITLPSPSSCGL Trigger: TAGACCACAGGAGGAGGGAGAAGGGAGGGTAATTTCTTGTAGCCAAGGAATCTGACTGTAGAGAAGCCAGCTATAAACCAAAAGCAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 90 bp | TACCCTCCCTTCTCCCTCCTCCTGTGGTCTAAACTTGAAGCTTCATaGTATTCAGATGGAGAACTATCTGAATGGCAGAAACCAATCTTC | + |
|
Preference number: 1 (lower is better) Translates to: YPPFSLLLWSKLEAS*YSDGELSEWQKPIF Trigger: GAAGATTGGTTTCTGCCATTCAGATAGTTCTCCATCTGAATACCATGAAGCTTCAAGTTTAGACCACAGGAGGAGGGAGAAGGGAGGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 90 bp | CATGCCCAATGCTGCCCATTCTTATTCCTGTGCTTTGACAACGGGTaGCCATTACTAATCTGGGTATTTCTTAGTAGAGGAACTCCAACT | + |
|
Preference number: 1 (lower is better) Translates to: HAQCCPFLFLCFDNG*PLLIWVFLSRGTPT Trigger: AGTTGGAGTTCCTCTACTAAGAAATACCCAGATTAGTAATGGCCACCCGTTGTCAAAGCACAGGAATAAGAATGGGCAGCATTGGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 90 bp | GATTCCTTGGCTACAAGAAATTACCCTCCCTTCTCCCTCCTCCTGTaGTCTAAACTTGAAGCTTCATGGTATTCAGATGGAGAACTATCT | + |
|
Preference number: 1 (lower is better) Translates to: DSLATRNYPPFSLLL*SKLEASWYSDGELS Trigger: AGATAGTTCTCCATCTGAATACCATGAAGCTTCAAGTTTAGACCACAGGAGGAGGGAGAAGGGAGGGTAATTTCTTGTAGCCAAGGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR TCA 90 bp | CTGTGCCTCTTTGACATTTATGAAAACTGTCTGAGGCCATCTTTCTaGGCTCTGATAAAGCAGCATGAATGGAAAACTGTTGAGTCAGAC | + |
|
Preference number: 1 (lower is better) Translates to: LCLFDIYENCLRPSF*ALIKQHEWKTVESD Trigger: GTCTGACTCAACAGTTTTCCATTCATGCTGCTTTATCAGAGCTCAGAAAGATGGCCTCAGACAGTTTTCATAAATGTCAAAGAGGCACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR GCA 90 bp | AGACAGTGTTATGGTTCCATTTCAAGATCCAGGATGTGGACGCTTTaGCTCACGCAAGTACAAAAGAAATATAAAAGACAGGAGGACACA | + |
|
Preference number: 1 (lower is better) Translates to: RQCYGSISRSRMWTL*LTQVQKKYKRQEDT Trigger: TGTGTCCTCCTGTCTTTTATATTTCTTTTGTACTTGCGTGAGGCAAAGCGTCCACATCCTGGATCTTGAAATGGAACCATAACACTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 90 bp | CCATTCTTATTCCTGTGCTTTGACAACGGGTGGCCATTACTAATCTaGGTATTTCTTAGTAGAGGAACTCCAACTCAAAGAGATATCACA | + |
|
Preference number: 1 (lower is better) Translates to: PFLFLCFDNGWPLLI*VFLSRGTPTQRDIT Trigger: TGTGATATCTCTTTGAGTTGGAGTTCCTCTACTAAGAAATACCCAGATTAGTAATGGCCACCCGTTGTCAAAGCACAGGAATAAGAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR TCA 90 bp | CGAAACAAAATGCCCTATGCTTTAGGTGTGCTTTTCGGATATTTCTaGTACAATCAATCCAGGAAATGGCTCAAACTGTATTCATGTAAG | + |
|
Preference number: 1 (lower is better) Translates to: RNKMPYALGVLFGYF*YNQSRKWLKLYSCK Trigger: CTTACATGAATACAGTTTGAGCCATTTCCTGGATTGATTGTATCAGAAATATCCGAAAAGCACACCTAAAGCATAGGGCATTTTGTTTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR-3UTR TCA 90 bp | GACCAAAGAAGTTCATGCGGACATACGGGTTCCTTCGGCTCCACACGTAGACCAACAGGGAAAACCCCATaGGCACCCAGGGCAGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: DQRSSCGHTGSFGSTRRPTGKTP*APRAGR Trigger: CCTTCCTGCCCTGGGTGCTCATGGGGTTTTCCCTGT...TGGTCTACGTGTGGAGCCGAAGGAACCCGTATGTCCGCATGAACTTCTTTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018586.6 ENSMUST00000132198.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGCAGGAAGGGGGCCTGGAAGTTTAGAAGACCAAAGAAGTTCATGCGGACATACAGGGAAAACCCCATaGGCACCCAGGGCAGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RAGRGPGSLEDQRSSCGHTGKTP*APRAGR Trigger: CCTTCCTGCCCTGGGTGCTCATGGGGTTTTCCCTGT...ATGTCCGCATGAACTTCTTTGGTCTTCTAAACTTCCAGGCCCCCTTCCTGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018586.6 ENSMUST00000132198.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAGGAGCACCCGCCTGTGCCACTGAGCTCAAGTACCCATGGACTTGCTCACATAGTGAGGAACCCCTaGCAAACTCCTGGAAATGTC | + |
|
Preference number: 2 (lower is better) Translates to: EEEHPPVPLSSSTHGLAHIVRNP*QTPGNV Trigger: GACATTTCCAGGAGTTTGCCAGGGGTTCCTCACTAT...GTGAGCAAGTCCATGGGTACTTGAGCTCAGTGGCACAGGCGGGTGCTCCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGAGCACCCGCCTGTGCCACTGAGCTCAAGTACCCATGGACTTGCTCACGGTGGGTCTCCAGTTTTTaGCTCCAAGAGGTTATACTT | + |
|
Preference number: 2 (lower is better) Translates to: GGAPACATELKYPWTCSRWVSSF*LQEVIL Trigger: AAGTATAACCTCTTGGAGCCAAAAACTGGAGACCCA...CCGTGAGCAAGTCCATGGGTACTTGAGCTCAGTGGCACAGGCGGGTGCTCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGAAAATCTCATCTGAAAAGCAACTCAGCCTAAACAGGATGACCCAGCCTGGGCCAGGCCCTTGGCCCTaGAAGGGTCTTGAGCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: EKISSEKQLSLNRMTQPGPGPWP*KGLELF Trigger: GAAAAGCTCAAGACCCTTCCAGGGCCAAGGGCCTGG...CCCAGGCTGGGTCATCCTGTTTAGGCTGAGTTGCTTTTCAGATGAGATTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CAA 90 bp | ATGGACTTGCTCACGGCACAGGCAGGGTGCCTGGGTCTCCAGTTTTaGGCTCCAAGAGGTTATACTTTTAGTACCAGCATAGTGAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: MDLLTAQAGCLGLQF*APRGYTFSTSIVRN Trigger: GTTCCTCACTATGCTGGTACTAAAAGTATAACCTCTTGGAGCCAAAAACTGGAGACCCAGGCACCCTGCCTGTGCCGTGAGCAAGTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| 3UTR-3UTR GCA 90 bp | GACCAAAGAAGTTCATGCGGACATACGGGTTCCTTCGGCTCCACACGTAGACCAGACCAAAGAAGTTCATaGGGACATACGGGTTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: DQRSSCGHTGSFGSTRRPDQRSS*GHTGSF Trigger: GAAGGAACCCGTATGTCCGCATGAACTTCTTTGGTC...TGGTCTACGTGTGGAGCCGAAGGAACCCGTATGTCCGCATGAACTTCTTTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018586.6 ENSMUST00000132198.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGAAGTTCATGCGGACATACGGGTTCCTTCGGCTCCACACGTAGACCAGCAATATATGTGCCCAACTaGAATACCCAAAAGGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: QRSSCGHTGSFGSTRRPAIYVPN*NTQKVH Trigger: GTGGACCTTTTGGGTATTGCAGTTGGGCACATATAT...TGCTGGTCTACGTGTGGAGCCGAAGGAACCCGTATGTCCGCATGAACTTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018586.6 ENSMUST00000132198.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCACCCAGGGCAGGAAGGGGGCCTGGAAGTTTAGAAGACCAAAGAAGTTCATGCATAAATACAAAGTCTaGTGTCCGACCTCGGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: STQGRKGAWKFRRPKKFMHKYKV*CPTSER Trigger: TCTTTCCGAGGTCGGACAGCAGACTTTGTATTTATG...CATGAACTTCTTTGGTCTTCTAAACTTCCAGGCCCCCTTCCTGCCCTGGGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132198.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGCAGGAAGGGGGCCTGGAAGTTTAGAAGACCAAAGAAGTTCATGCGGACATCTTATTCCACCAGGCTaGTTGGGAAATATATCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RAGRGPGSLEDQRSSCGHLIPPG*LGNISS Trigger: GGAAGATATATTTCCCAATCAGCCTGGTGGAATAAG...ATGTCCGCATGAACTTCTTTGGTCTTCTAAACTTCCAGGCCCCCTTCCTGCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018586.6 ENSMUST00000132198.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGAAAATCTCATCTGAAAAGCAACTCAGCCTAAACAGGATGACCCAGCCTGGGGAAATGAAATCCAGTTaGAAGCCGTGGAGACATGAG | + |
|
Preference number: 2 (lower is better) Translates to: EKISSEKQLSLNRMTQPGEMKSS*KPWRHE Trigger: CTCATGTCTCCACGGCTTTCAACTGGATTTCATTTC...CCCAGGCTGGGTCATCCTGTTTAGGCTGAGTTGCTTTTCAGATGAGATTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGCAGTCCCATTGGCCCACGTCCCATAGAGTTACAATGGTCTTCAGTGATTTTCTCCCTCCTCCTGTaGTCTAAACTTGAAGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: KSSPIGPRPIELQWSSVIFSLLL*SKLEAS Trigger: TGAAGCTTCAAGTTTAGACCACAGGAGGAGGGAGAA...AATCACTGAAGACCATTGTAACTCTATGGGACGTGGGCCAATGGGACTGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CAA 90 bp | CTACAAGAAATTACCCTCCCTTCTCCCTCCTCCTGTGGTCTAAACTaGAAGCTTCATGGTATTCAGATGGAGAACTATCTGAATGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LQEITLPSPSSCGLN*KLHGIQMENYLNGR Trigger: TCTGCCATTCAGATAGTTCTCCATCTGAATACCATGAAGCTTCAAGTTTAGACCACAGGAGGAGGGAGAAGGGAGGGTAATTTCTTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCCCATTCTTATTCCTGTGCTTTGACAACGGGTGGCCATTACTAATCTGGGTATTTCCAATCTTGAAATaGAATCCAGTTGAAAGCCGT | + |
|
Preference number: 2 (lower is better) Translates to: CPFLFLCFDNGWPLLIWVFPILK*NPVESR Trigger: ACGGCTTTCAACTGGATTTCATTTCAAGATTGGAAA...TACCCAGATTAGTAATGGCCACCCGTTGTCAAAGCACAGGAATAAGAATGGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTGAAATGAATGACAAGAGGAACACATGCCCAATGCTGCCCATTCTTATTATAGTGAGGAACCCCTaGCAAACTCCTGGAAATGTC | + |
|
Preference number: 2 (lower is better) Translates to: FLEMNDKRNTCPMLPILIIVRNP*QTPGNV Trigger: GACATTTCCAGGAGTTTGCCAGGGGTTCCTCACTAT...AATAAGAATGGGCAGCATTGGGCATGTGTTCCTCTTGTCATTCATTTCAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CAA 90 bp | GGGTATTTCTTAGTAGAGGAACTCCAACTCAAAGAGATATCACAGTaGCTTTTGGTTTATAGCTGGCTTCTCTACAGTCAGATTCCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: GYFLVEELQLKEISQ*LLVYSWLLYSQIPW Trigger: CCAAGGAATCTGACTGTAGAGAAGCCAGCTATAAACCAAAAGCAACTGTGATATCTCTTTGAGTTGGAGTTCCTCTACTAAGAAATACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CAA 90 bp | TTCTTAGTAGAGGAACTCCAACTCAAAGAGATATCACAGTTGCTTTaGGTTTATAGCTGGCTTCTCTACAGTCAGATTCCTTGGCTACAA | + |
|
Preference number: 2 (lower is better) Translates to: FLVEELQLKEISQLL*VYSWLLYSQIPWLQ Trigger: TTGTAGCCAAGGAATCTGACTGTAGAGAAGCCAGCTATAAACCAAAAGCAACTGTGATATCTCTTTGAGTTGGAGTTCCTCTACTAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 72 bp | GGAGCACCCGCCTGTGCCACTGAGCTCAAGTACCCATaGACTTGCTCACGGCACAGGCAGGGTGCCTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GAPACATELKYP*TCSRHRQGAWV Trigger: GACCCAGGCACCCTGCCTGTGCCGTGAGCAAGTCCATGGGTACTTGAGCTCAGTGGCACAGGCGGGTGCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| 3UTR GCA 72 bp | CCCGCCTGTGCCACTGAGCTCAAGTACCCATGGACTTaGTCACGGCACAGGCAGGGTGCCTGGGTCTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PACATELKYPWT*SRHRQGAWVSS Trigger: ACTGGAGACCCAGGCACCCTGCCTGTGCCGTGAGCAAGTCCATGGGTACTTGAGCTCAGTGGCACAGGCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| 3UTR GCA 72 bp | ACCATCAGTGTGGCTGCTTCCAAAGACCCTGATTTCTaGCCGACTGGGAAGGTGAACCAGGCCCTTGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TISVAASKDPDF*PTGKVNQALGP Trigger: AGGGCCAAGGGCCTGGTTCACCTTCCCAGTCGGGCAGAAATCAGGGTCTTTGGAAGCAGCCACACTGATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR TCA 72 bp | ACTCTGAACCATCAGTGTGGCTGCTTCCAAAGACCCTaGTTTCTGCCCGACTGGGAAGGTGAACCAGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TLNHQCGCFQRP*FLPDWEGEPGP Trigger: AGGGCCTGGTTCACCTTCCCAGTCGGGCAGAAATCAGGGTCTTTGGAAGCAGCCACACTGATGGTTCAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR TCA 72 bp | CCAGGGACCTGCCAAACTACTAAGAGGCCAAGTGACTaGAATCAGCACTGCCAGGAGACAGTGTGTCACACA | + |
|
Preference number: 3 (lower is better) Translates to: PGTCQTTKRPSD*NQHCQETVCHT Trigger: TGTGTGACACACTGTCTCCTGGCAGTGCTGATTTCAGTCACTTGGCCTCTTAGTAGTTTGGCAGGTCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR GCA 72 bp | AGGGGGCCTGGAAGTTTAGAAGACCAAAGAAGTTCATaGGGACATACGGGTTCCTTCGGCTCCACACGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: RGPGSLEDQRSS*GHTGSFGSTRR Trigger: TCTACGTGTGGAGCCGAAGGAACCCGTATGTCCGCATGAACTTCTTTGGTCTTCTAAACTTCCAGGCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018586.6 ENSMUST00000132198.8 |
||
| 3UTR GCA 72 bp | CAGCCTAAACAGGATGACCCAGCCTGGGAAGTCCTGTaGCTCTTTGACATTTATGAAAACTGTCTGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QPKQDDPAWEVL*LFDIYENCLRP Trigger: TGGCCTCAGACAGTTTTCATAAATGTCAAAGAGGCACAGGACTTCCCAGGCTGGGTCATCCTGTTTAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 72 bp | TGTGCCATCTTTGATAAGTACTCTGAACCATCAGTGTaGCTGCTTCCAAAGACCCTGATTTCTGCCCGACTG | + |
|
Preference number: 3 (lower is better) Translates to: CAIFDKYSEPSV*LLPKTLISARL Trigger: CAGTCGGGCAGAAATCAGGGTCTTTGGAAGCAGCCACACTGATGGTTCAGAGTACTTATCAAAGATGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR TCA 72 bp | CAGCTGTGTATTTCCAATCTTGAAATGAAATCCAGTTaGAAGCCGTGGAGACATGAGGGCAGGCACGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: QLCISNLEMKSS*KPWRHEGRHGN Trigger: GTTTCCGTGCCTGCCCTCATGTCTCCACGGCTTTCAACTGGATTTCATTTCAAGATTGGAAATACACAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 72 bp | TTGGTTTATAGCTGGCTTCTCTACAGTCAGATTCCTTaGCTACAAGAAATTACCCTCCCTTCTCCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LVYSWLLYSQIP*LQEITLPSPSS Trigger: GGAGGAGGGAGAAGGGAGGGTAATTTCTTGTAGCCAAGGAATCTGACTGTAGAGAAGCCAGCTATAAACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 72 bp | AATCAGCACTGCCAGGAGACAGTGTGTCACACAGCATaGTGTTCTACCACTAGGAATTCACACCCTAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: NQHCQETVCHTA*CSTTRNSHPNN Trigger: ATTGTTAGGGTGTGAATTCCTAGTGGTAGAACACCATGCTGTGTGACACACTGTCTCCTGGCAGTGCTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR TCA 72 bp | CAAAAGATGATCTGTCAGACACATTTCACTCTTATCTaGGGTGGCCAAGTCTGTCGAAGTAACTCCCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QKMICQTHFTLI*GGQVCRSNSLV Trigger: GACCAGGGAGTTACTTCGACAGACTTGGCCACCTCAGATAAGAGTGAAATGTGTCTGACAGATCATCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108523.10 |
||
| 3UTR TCA 72 bp | ACATGCCCAATGCTGCCCATTCTTATTCCTGTGCTTTaGCAACGGGTGGCCATTACTAATCTGGGTATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TCPMLPILIPVL*QRVAITNLGIS Trigger: AGAAATACCCAGATTAGTAATGGCCACCCGTTGTCAAAGCACAGGAATAAGAATGGGCAGCATTGGGCATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 72 bp | GAAGCTTCATGGTATTCAGATGGAGAACTATCTGAATaGCAGAAACCAATCTTCCCTCTCCAGAGGCTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: EASWYSDGELSE*QKPIFPLQRLR Trigger: TCTTAGCCTCTGGAGAGGGAAGATTGGTTTCTGCCATTCAGATAGTTCTCCATCTGAATACCATGAAGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 72 bp | TGCTGCCCATTCTTATTCCTGTGCTTTGACAACGGGTaGCCATTACTAATCTGGGTATTTCTTAGTAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CCPFLFLCFDNG*PLLIWVFLSRG Trigger: TCCTCTACTAAGAAATACCCAGATTAGTAATGGCCACCCGTTGTCAAAGCACAGGAATAAGAATGGGCAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 72 bp | TTCTCCCTCCTCCTGTGGTCTAAACTTGAAGCTTCATaGTATTCAGATGGAGAACTATCTGAATGGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FSLLLWSKLEAS*YSDGELSEWQK Trigger: TTTCTGCCATTCAGATAGTTCTCCATCTGAATACCATGAAGCTTCAAGTTTAGACCACAGGAGGAGGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 72 bp | TTCCTGTGCTTTGACAACGGGTGGCCATTACTAATCTaGGTATTTCTTAGTAGAGGAACTCCAACTCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FLCFDNGWPLLI*VFLSRGTPTQR Trigger: TCTTTGAGTTGGAGTTCCTCTACTAAGAAATACCCAGATTAGTAATGGCCACCCGTTGTCAAAGCACAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR TCA 72 bp | AGAGCGGCTGAACGAGACAAGCAAGGTTCAAGAACTTaGATCAAACTCAAAACAGTAAGTAGTTTAGTCATC | + |
|
Preference number: 3 (lower is better) Translates to: RAAERDKQGSRT*IKLKTVSSLVI Trigger: GATGACTAAACTACTTACTGTTTTGAGTTTGATTCAAGTTCTTGAACCTTGCTTGTCTCGTTCAGCCGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR GCA 72 bp | TATGGTTCCATTTCAAGATCCAGGATGTGGACGCTTTaGCTCACGCAAGTACAAAAGAAATATAAAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: YGSISRSRMWTL*LTQVQKKYKRQ Trigger: CTGTCTTTTATATTTCTTTTGTACTTGCGTGAGGCAAAGCGTCCACATCCTGGATCTTGAAATGGAACCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 72 bp | CTCAAAGAGATATCACAGTTGCTTTTGGTTTATAGCTaGCTTCTCTACAGTCAGATTCCTTGGCTACAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LKEISQLLLVYS*LLYSQIPWLQE Trigger: TTCTTGTAGCCAAGGAATCTGACTGTAGAGAAGCCAGCTATAAACCAAAAGCAACTGTGATATCTCTTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CCA 72 bp | AGGAACTCCAACTCAAAGAGATATCACAGTTGCTTTTaGTTTATAGCTGGCTTCTCTACAGTCAGATTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RNSNSKRYHSCF*FIAGFSTVRFL Trigger: AAGGAATCTGACTGTAGAGAAGCCAGCTATAAACCAAAAGCAACTGTGATATCTCTTTGAGTTGGAGTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| CDS-3UTR CCA 90 bp | AATTCCAACTGCTGGCCCTTCACGAAGGGGCACACCCTTCTCAGGTCACTGGCTGTCTCCACCCACCCCTaGGACCAGACCCACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSNCWPFTKGHTLLRSLAVSTHP*DQTHWA Trigger: AGCCCAGTGGGTCTGGTCCCAGGGGTGGGTGGAGAC...AGCCAGTGACCTGAGAAGGGTGTGCCCCTTCGTGAAGGGCCAGCAGTTGGAATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131340.2 |
||
| CDS-3UTR TCA 90 bp | GACTTGCTCACGGCACAGGCAGGGTGCCTGGGTCTCCAGTTTTTGGCTCCAAGAACAGGGAAAACCCCATaGGCACCCAGGGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLLTAQAGCLGLQFLAPRTGKTP*APRAGR Trigger: CCTTCCTGCCCTGGGTGCTCATGGGGTTTTCCCTGT...TCTTGGAGCCAAAAACTGGAGACCCAGGCACCCTGCCTGTGCCGTGAGCAAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| CDS-3UTR GCA 90 bp | CATGACCCTACCAGCTCACGGTCTCCTCCGATTGCAAGGCCACCAAATCATTGCCTGACCGGCGGGATCTaGAGGTACTCCAGCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HDPTSSRSPPIARPPNHCLTGGI*RYSSRR Trigger: CCTCCGGCTGGAGTACCTGCAGATCCCGCCGGTCAG...GCAATGATTTGGTGGCCTTGCAATCGGAGGAGACCGTGAGCTGGTAGGGTCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108523.10 |
||
| CDS-3UTR CCA 90 bp | TCAATTCCAACTGCTGGCCCTTCACGAAGGGGCACACCCTTCTCAGGTCACTGGTGGGACCAGACCCACTaGGCTTCTCCGCGGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SIPTAGPSRRGTPFSGHWWDQTH*ASPRPK Trigger: TTTGGGCCGCGGAGAAGCCCAGTGGGTCTGGTCCCA...CCAGTGACCTGAGAAGGGTGTGCCCCTTCGTGAAGGGCCAGCAGTTGGAATTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131340.2 |
||
| CDS-3UTR GCA 90 bp | GCGGACATACGGGTTCCTTCGGCTCCACACGTAGACCAGCATTATTGTAAAGGCCTGACCGGCGGGATCTaGAGGTACTCCAGCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADIRVPSAPHVDQHYCKGLTGGI*RYSSRR Trigger: CCTCCGGCTGGAGTACCTGCAGATCCCGCCGGTCAG...GCCTTTACAATAATGCTGGTCTACGTGTGGAGCCGAAGGAACCCGTATGTCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018586.6 ENSMUST00000132198.8 |
||
| CDS-3UTR CCA 90 bp | GCACCCGCCTGTGCCACTGAGCTCAAGTACCCATGGACTTGCTCACGGCACAGGGGCAGGAAGGGGGCCTaGAAGTTTAGAAGACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: APACATELKYPWTCSRHRGRKGA*KFRRPK Trigger: CTTTGGTCTTCTAAACTTCCAGGCCCCCTTCCTGCC...CCTGTGCCGTGAGCAAGTCCATGGGTACTTGAGCTCAGTGGCACAGGCGGGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGTTTAGAAGACCAAAGAAGTTCATGCGGACATACGGGTTCCTTCGGCTCCCTGACCGGCGGGATCTaGAGGTACTCCAGCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSLEDQRSSCGHTGSFGSLTGGI*RYSSRR Trigger: CCTCCGGCTGGAGTACCTGCAGATCCCGCCGGTCAG...GGAGCCGAAGGAACCCGTATGTCCGCATGAACTTCTTTGGTCTTCTAAACTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018586.6 ENSMUST00000132198.8 |
||
| CDS-3UTR CCA 90 bp | TATCAAAGAGGAGGAGGAGCACCCGCCTGTGCCACTGAGCTCAAGTACCCATGGGGCAGGAAGGGGGCCTaGAAGTTTAGAAGACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YQRGGGAPACATELKYPWGRKGA*KFRRPK Trigger: CTTTGGTCTTCTAAACTTCCAGGCCCCCTTCCTGCC...CCATGGGTACTTGAGCTCAGTGGCACAGGCGGGTGCTCCTCCTCCTCTTTGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| CDS-3UTR GCA 90 bp | GACTTGCTCACGGCACAGGCAGGGTGCCTGGGTCTCCAGTTTTTGGCTCCAAGAGACCAAAGAAGTTCATaGGGACATACGGGTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLLTAQAGCLGLQFLAPRDQRSS*GHTGSF Trigger: GAAGGAACCCGTATGTCCGCATGAACTTCTTTGGTC...TCTTGGAGCCAAAAACTGGAGACCCAGGCACCCTGCCTGTGCCGTGAGCAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| CDS-3UTR TCA 90 bp | AGACACATTTCACTCTTATCTGAGGTGGCCAAGTCTGTCGAAGTAACTCCCTGGACAGGGAAAACCCCATaGGCACCCAGGGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHISLLSEVAKSVEVTPWTGKTP*APRAGR Trigger: CCTTCCTGCCCTGGGTGCTCATGGGGTTTTCCCTGT...CCAGGGAGTTACTTCGACAGACTTGGCCACCTCAGATAAGAGTGAAATGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108523.10 |
||
| CDS-3UTR GCA 90 bp | ATAAAAGACCCCCATGGACATGTCACTGAGTCTTTCTCAGATGGGTCTCGTAATCTGACCGGCGGGATCTaGAGGTACTCCAGCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IKDPHGHVTESFSDGSRNLTGGI*RYSSRR Trigger: CCTCCGGCTGGAGTACCTGCAGATCCCGCCGGTCAG...ATTACGAGACCCATCTGAGAAAGACTCAGTGACATGTCCATGGGGGTCTTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGAGCACCCGCCTGTGCCACTGAGCTCAAGTACCCATGGACTTGCTCACATATATGTGCCCAACTaGAATACCCAAAAGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EEEHPPVPLSSSTHGLAHIYVPN*NTQKVH Trigger: GTGGACCTTTTGGGTATTGCAGTTGGGCACATATAT...GTGAGCAAGTCCATGGGTACTTGAGCTCAGTGGCACAGGCGGGTGCTCCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| CDS-3UTR GCA 90 bp | GGACTTGCTCACGGCACAGGCAGGGTGCCTGGGTCTCCAGTTTTTGGCTCCAAGATATATGTGCCCAACTaGAATACCCAAAAGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLAHGTGRVPGSPVFGSKIYVPN*NTQKVH Trigger: GTGGACCTTTTGGGTATTGCAGTTGGGCACATATAT...CTTGGAGCCAAAAACTGGAGACCCAGGCACCCTGCCTGTGCCGTGAGCAAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCATTCTTATTCCTGTGCTTTGACAACGGGTGGCCATTACTAATCTGGGTAACAGGGAAAACCCCATaGGCACCCAGGGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPFLFLCFDNGWPLLIWVTGKTP*APRAGR Trigger: CCTTCCTGCCCTGGGTGCTCATGGGGTTTTCCCTGT...TACCCAGATTAGTAATGGCCACCCGTTGTCAAAGCACAGGAATAAGAATGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CAA 72 bp | CTCACGGCACAGGCAGGGTGCCTGGGTCTCCAGTTTTaGGCTCCAAGAGGTTATACTTTTAGTACCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LTAQAGCLGLQF*APRGYTFSTSI Trigger: TATGCTGGTACTAAAAGTATAACCTCTTGGAGCCAAAAACTGGAGACCCAGGCACCCTGCCTGTGCCGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| CDS-3UTR CCA 90 bp | AGACACATTTCACTCTTATCTGAGGTGGCCAAGTCTGTCGAAGTAACTCCCTGGGGCAGGAAGGGGGCCTaGAAGTTTAGAAGACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RHISLLSEVAKSVEVTPWGRKGA*KFRRPK Trigger: CTTTGGTCTTCTAAACTTCCAGGCCCCCTTCCTGCC...CCAGGGAGTTACTTCGACAGACTTGGCCACCTCAGATAAGAGTGAAATGTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108523.10 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGGTGCCTGGGTCTCCAGTTTTTGGCTCCAAGAGGTTATACTTTTAGTGACCAAAGAAGTTCATaGGGACATACGGGTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAGCLGLQFLAPRGYTFSDQRSS*GHTGSF Trigger: GAAGGAACCCGTATGTCCGCATGAACTTCTTTGGTC...ACTAAAAGTATAACCTCTTGGAGCCAAAAACTGGAGACCCAGGCACCCTGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143850.8 ENSMUST00000171041.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCAAAAGATGATCTGTCAGACACATTTCACTCTTATCTGAGGTGGCCAAGTGACCAAAGAAGTTCATaGGGACATACGGGTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPKDDLSDTFHSYLRWPSDQRSS*GHTGSF Trigger: GAAGGAACCCGTATGTCCGCATGAACTTCTTTGGTC...ACTTGGCCACCTCAGATAAGAGTGAAATGTGTCTGACAGATCATCTTTTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108523.10 |
||
| 3UTR CAA 72 bp | ATTACCCTCCCTTCTCCCTCCTCCTGTGGTCTAAACTaGAAGCTTCATGGTATTCAGATGGAGAACTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITLPSPSSCGLN*KLHGIQMENYL Trigger: CAGATAGTTCTCCATCTGAATACCATGAAGCTTCAAGTTTAGACCACAGGAGGAGGGAGAAGGGAGGGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| CDS-3UTR GCA 90 bp | CCAAAAGATGATCTGTCAGACACATTTCACTCTTATCTGAGGTGGCCAAGTCTGATATATGTGCCCAACTaGAATACCCAAAAGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PKDDLSDTFHSYLRWPSLIYVPN*NTQKVH Trigger: GTGGACCTTTTGGGTATTGCAGTTGGGCACATATAT...CAGACTTGGCCACCTCAGATAAGAGTGAAATGTGTCTGACAGATCATCTTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108523.10 |
||
| CDS-3UTR TCA 90 bp | TCCAGGATGTGGACGCTTTGCCTCACGCAAGTACAAAAGAAATATAAAAGACAGCTTATTCCACCAGGCTaGTTGGGAAATATATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRMWTLCLTQVQKKYKRQLIPPG*LGNISS Trigger: GGAAGATATATTTCCCAATCAGCCTGGTGGAATAAG...CTGTCTTTTATATTTCTTTTGTACTTGCGTGAGGCAAAGCGTCCACATCCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| 3UTR CAA 72 bp | GAGGAACTCCAACTCAAAGAGATATCACAGTTGCTTTaGGTTTATAGCTGGCTTCTCTACAGTCAGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EELQLKEISQLL*VYSWLLYSQIP Trigger: AGGAATCTGACTGTAGAGAAGCCAGCTATAAACCAAAAGCAACTGTGATATCTCTTTGAGTTGGAGTTCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||
| CDS-3UTR TCA 90 bp | CTGATTATTCCTCCAAAAGATGATCTGTCAGACACATTTCACTCTTATCTGAGGCTTATTCCACCAGGCTaGTTGGGAAATATATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIIPPKDDLSDTFHSYLRLIPPG*LGNISS Trigger: GGAAGATATATTTCCCAATCAGCCTGGTGGAATAAG...CCTCAGATAAGAGTGAAATGTGTCTGACAGATCATCTTTTGGAGGAATAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108523.10 |
||
| CDS-3UTR GCA 90 bp | ATTATTCCTCCAAAAGATGATCTGTCAGACACATTTCACTCTTATCTGAGGTGGCATAAATACAAAGTCTaGTGTCCGACCTCGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIPPKDDLSDTFHSYLRWHKYKV*CPTSER Trigger: TCTTTCCGAGGTCGGACAGCAGACTTTGTATTTATG...CCACCTCAGATAAGAGTGAAATGTGTCTGACAGATCATCTTTTGGAGGAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108523.10 |
||
| 3UTR CAA 72 bp | TTAGTAGAGGAACTCCAACTCAAAGAGATATCACAGTaGCTTTTGGTTTATAGCTGGCTTCTCTACAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVEELQLKEISQ*LLVYSWLLYSQ Trigger: CTGACTGTAGAGAAGCCAGCTATAAACCAAAAGCAACTGTGATATCTCTTTGAGTTGGAGTTCCTCTACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143850.8 |
||