Pregenerated sensors for DERL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022365Ensembl transcript IDs: ENSMUST00000022993.7
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTCCCAGTCTGGGCCACCACTGACTCAGTGGTGCCTTTGGGTATaGATATCTGAGAAGGCGGCAAATGGCGGCACTGCGGACAGGCGG | + |
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Preference number: 1 (lower is better) Translates to: HSQSGPPLTQWCLWV*ISEKAANGGTADRR Trigger: CCGCCTGTCCGCAGTGCCGCCATTTGCCGCCTTCTCAGATATTCATACCCAAAGGCACCACTGAGTCAGTGGTGGCCCAGACTGGGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR GCA 90 bp | GAATATCTGAGAAGGCGGCAAATGGCGGCACTGCGGACAGGCGGATaGAGGCCCCACAGCAGAGGAAGAGCTTCCTCAGCTGCTCCATCT | + |
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Preference number: 1 (lower is better) Translates to: EYLRRRQMAALRTGG*RPHSRGRASSAAPS Trigger: AGATGGAGCAGCTGAGGAAGCTCTTCCTCTGCTGTGGGGCCTGCATCCGCCTGTCCGCAGTGCCGCCATTTGCCGCCTTCTCAGATATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CCA 90 bp | GTCCCGAAGCTTGCCTCCAGGGACGTGTGTCTGGCCAGTGTGATCTaGAACCTCCTACCACAACACAGCGCAGCACAAATGCTCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: VPKLASRDVCLASVI*NLLPQHSAAQMLWA Trigger: TGCCCAGAGCATTTGTGCTGCGCTGTGTTGTGGTAGGAGGTTCCAGATCACACTGGCCAGACACACGTCCCTGGAGGCAAGCTTCGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR TCA 90 bp | TCAGTGTCCCGAAGCTTGCCTCCAGGGACGTGTGTCTGGCCAGTGTaGTCTGGAACCTCCTACCACAACACAGCGCAGCACAAATGCTCT | + |
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Preference number: 1 (lower is better) Translates to: SVSRSLPPGTCVWPV*SGTSYHNTAQHKCS Trigger: AGAGCATTTGTGCTGCGCTGTGTTGTGGTAGGAGGTTCCAGATCACACTGGCCAGACACACGTCCCTGGAGGCAAGCTTCGGGACACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR GCA 90 bp | CTCTCCCCACACCAACACCCACACCCTCAGGCAGGTTCAGGCGCGTaGACACACACAGAGGAAACCTCAGTACTGATTTCTTCCAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: LSPHQHPHPQAGSGA*THTEETSVLISSRN Trigger: ATTCCTGGAAGAAATCAGTACTGAGGTTTCCTCTGTGTGTGTGCACGCGCCTGAACCTGCCTGAGGGTGTGGGTGTTGGTGTGGGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CCA 90 bp | CCTTGCACAGAAGTGCACAGGCACCGGCACAGGGAGATCGGCTTGTaGATCTTAGACAAACACATTTTATCACAGCCTCGGGTCGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: PCTEVHRHRHREIGL*ILDKHILSQPRVGR Trigger: CCTGCCGACCCGAGGCTGTGATAAAATGTGTTTGTCTAAGATCCACAAGCCGATCTCCCTGTGCCGGTGCCTGTGCACTTCTGTGCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CCA 90 bp | AACCCATCCTGTGTCAGGAGCAACTCCACTATGGTTCTGATCACATaGCTCAGAGGAGAAAAGTGCCTAGCAACGAGTCCTAACCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: NPSCVRSNSTMVLIT*LRGEKCLATSPNPH Trigger: ATGAGGGTTAGGACTCGTTGCTAGGCACTTTTCTCCTCTGAGCCATGTGATCAGAACCATAGTGGAGTTGCTCCTGACACAGGATGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CCA 90 bp | AACTCTGGGGACATGAGTGAGAGGAAAGGGTTCTTTGACTGGATTTaGTTAACCAACCCCTCCTGCCCAGCTCATTATTCAGATGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: NSGDMSERKGFFDWI*LTNPSCPAHYSDGR Trigger: CCTTCCATCTGAATAATGAGCTGGGCAGGAGGGGTTGGTTAACCAAATCCAGTCAAAGAACCCTTTCCTCTCACTCATGTCCCCAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CCA 90 bp | GATGGCCGAGAGCCATGTGTGAAGCAGCTCTTTGTGACCAAGCTTTaGCAAAAGTCAGCAAGTTTGTCAAAGGCAAAACCCTTCTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: DGREPCVKQLFVTKL*QKSASLSKAKPFCG Trigger: TCCACAGAAGGGTTTTGCCTTTGACAAACTTGCTGACTTTTGCCAAAGCTTGGTCACAAAGAGCTGCTTCACACATGGCTCTCGGCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR GCA 90 bp | CCCACCTATGAAAAGGGAGCAGGTCTGATTCACAAAGAGTATACATaGATGACTCAAGATAATAATGACCTCCAAACGCAAATGATCCTA | + |
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Preference number: 1 (lower is better) Translates to: PTYEKGAGLIHKEYT*MTQDNNDLQTQMIL Trigger: TAGGATCATTTGCGTTTGGAGGTCATTATTATCTTGAGTCATGCATGTATACTCTTTGTGAATCAGACCTGCTCCCTTTTCATAGGTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR GCA 90 bp | GGCCAGTGTGATCTGGAACCTCCTACCACAACACAGCGCAGCACAAATGCTCTGCTGCGGACAGGCGGATaGAGGCCCCACAGCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: GQCDLEPPTTTQRSTNALLRTGG*RPHSRG Trigger: TCCTCTGCTGTGGGGCCTGCATCCGCCTGTCCGCAG...CAGAGCATTTGTGCTGCGCTGTGTTGTGGTAGGAGGTTCCAGATCACACTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGGAGATCGGCTTGTGGATCTTAGACAAACACATTTTATCACAGCCTCGGGTGGCAAATGGCGGCACTaGGGACAGGCGGATGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QGDRLVDLRQTHFITASGGKWRH*GQADAG Trigger: GCCTGCATCCGCCTGTCCGCAGTGCCGCCATTTGCC...ACCCGAGGCTGTGATAAAATGTGTTTGTCTAAGATCCACAAGCCGATCTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGTGTGATCTGGAACCTCCTACCACAACACAGCGCAGCACAAATGCTCTGTCATCACTCCCAGTCTaGGCCACCACTGACTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: GQCDLEPPTTTQRSTNALSSLPV*ATTDSV Trigger: CACTGAGTCAGTGGTGGCCCAGACTGGGAGTGATGA...CAGAGCATTTGTGCTGCGCTGTGTTGTGGTAGGAGGTTCCAGATCACACTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CAA 90 bp | CTTCCTTGCACAGAAGTGCACAGGCACCGGCACAGGGAGATCGGCTaGTGGATCTTAGACAAACACATTTTATCACAGCCTCGGGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: LPCTEVHRHRHREIG*WILDKHILSQPRVG Trigger: GCCGACCCGAGGCTGTGATAAAATGTGTTTGTCTAAGATCCACAAGCCGATCTCCCTGTGCCGGTGCCTGTGCACTTCTGTGCAAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR CCA 90 bp | TGTGATCTGGAACCTCCTACCACAACACAGCGCAGCACAAATGCTCTGGGCACAAAGCATGCCCAGCACTaGGAGGAGACTGTCATCTGC | + |
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Preference number: 2 (lower is better) Translates to: CDLEPPTTTQRSTNALGTKHAQH*EETVIC Trigger: GCAGATGACAGTCTCCTCCCAGTGCTGGGCATGCTT...TGTGCCCAGAGCATTTGTGCTGCGCTGTGTTGTGGTAGGAGGTTCCAGATCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR CCA 90 bp | GCGGATGCAGGCCCCACAGCAGAGGAAGAGCTTCCTCAGCTGCTCCATCTTCTCTTCTTTGACTGGATTTaGTTAACCAACCCCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: ADAGPTAEEELPQLLHLLFFDWI*LTNPSC Trigger: GCAGGAGGGGTTGGTTAACCAAATCCAGTCAAAGAA...GAGAAGATGGAGCAGCTGAGGAAGCTCTTCCTCTGCTGTGGGGCCTGCATCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR TCA 90 bp | GACATCATTCAGAGCATACCAGCTACACCACACTGCGGCCAGCAGCCTGATTTCGCAACTCTGGGGACATaGGTGAGAGGAAAGGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: DIIQSIPATPHCGQQPDFATLGT*VRGKGS Trigger: AGAACCCTTTCCTCTCACTCATGTCCCCAGAGTTGC...GAAATCAGGCTGCTGGCCGCAGTGTGGTGTAGCTGGTATGCTCTGAATGATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR CCA 90 bp | TCCGAAGGTGAGTCTCCACCTTCCTTGCACAGAAGTGCACAGGCACCGGCACAGTTTGTGACCAAGCTTTaGCAAAAGTCAGCAAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: SEGESPPSLHRSAQAPAQFVTKL*QKSASL Trigger: CAAACTTGCTGACTTTTGCCAAAGCTTGGTCACAAA...CTGTGCCGGTGCCTGTGCACTTCTGTGCAAGGAAGGTGGAGACTCACCTTCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAGATCGGCTTGTGGATCTTAGACAAACACATTTTATCACAGCCTCGGGTTTGGGTATGAATATCTaGGAAGGCGGCAAATGGCGG | + |
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Preference number: 2 (lower is better) Translates to: QGDRLVDLRQTHFITASGLGMNI*EGGKWR Trigger: CCGCCATTTGCCGCCTTCTCAGATATTCATACCCAA...ACCCGAGGCTGTGATAAAATGTGTTTGTCTAAGATCCACAAGCCGATCTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR CCA 90 bp | TTGTGGATCTTAGACAAACACATTTTATCACAGCCTCGGGTCGGCAGGAGAACCAAAGGGTTCTTTGACTaGATTTGGTTAACCAACCCC | + |
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Preference number: 2 (lower is better) Translates to: LWILDKHILSQPRVGRRTKGFFD*IWLTNP Trigger: GGGGTTGGTTAACCAAATCCAGTCAAAGAACCCTTT...GGTTCTCCTGCCGACCCGAGGCTGTGATAAAATGTGTTTGTCTAAGATCCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR TCA 90 bp | GCACCAATCACATACAAAAAGGCTTGCTGTCCTGCTAGTCATAAACTACTGGAGGAAGACACCAGAAAATaGGTCAGTTTTGAAATCTGC | + |
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Preference number: 2 (lower is better) Translates to: APITYKKACCPASHKLLEEDTRK*VSFEIC Trigger: GCAGATTTCAAAACTGACTCATTTTCTGGTGTCTTC...CTCCAGTAGTTTATGACTAGCAGGACAGCAAGCCTTTTTGTATGTGATTGGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CAA 90 bp | ACTCAAGATAATAATGACCTCCAAACGCAAATGATCCTAAAGCTATaGGAACCTCTAATTATGAGTGACTCATTCAGATGTGCCTCTATT | + |
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Preference number: 2 (lower is better) Translates to: TQDNNDLQTQMILKL*EPLIMSDSFRCASI Trigger: AATAGAGGCACATCTGAATGAGTCACTCATAATTAGAGGTTCCAATAGCTTTAGGATCATTTGCGTTTGGAGGTCATTATTATCTTGAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR TCA 90 bp | ACTCAAGATAATAATGACCTCCAAACGCAAATGATCCTAAAGCTATTGGAACCTGAGAATCATGAAACTTaGGGAACACTTGTATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: TQDNNDLQTQMILKLLEPENHET*GTLVFS Trigger: GGAAAATACAAGTGTTCCTCAAGTTTCATGATTCTC...AGGTTCCAATAGCTTTAGGATCATTTGCGTTTGGAGGTCATTATTATCTTGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR GCA 72 bp | ACTAAGCATGCCCAGCACTGGGAGGAGACTGTCATCTaGTCGGCATGGCTGGTGAGCAGGCCAGGGCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: TKHAQHWEETVI*SAWLVSRPGLP Trigger: GGGCAGCCCTGGCCTGCTCACCAGCCATGCCGAGCAGATGACAGTCTCCTCCCAGTGCTGGGCATGCTTAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CCA 72 bp | GGCAGCAAGAGCTCGGCCACTAAGCATGCCCAGCACTaGGAGGAGACTGTCATCTGCTCGGCATGGCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: GSKSSATKHAQH*EETVICSAWLV Trigger: CACCAGCCATGCCGAGCAGATGACAGTCTCCTCCCAGTGCTGGGCATGCTTAGTGGCCGAGCTCTTGCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR TCA 72 bp | CGAAGCTTGCCTCCAGGGACGTGTGTCTGGCCAGTGTaGTCTGGAACCTCCTACCACAACACAGCGCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: RSLPPGTCVWPV*SGTSYHNTAQH Trigger: GTGCTGCGCTGTGTTGTGGTAGGAGGTTCCAGATCACACTGGCCAGACACACGTCCCTGGAGGCAAGCTTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR CAA 90 bp | CAGCCTCGGGTCGGCAGGAGAACCAGGCGGCTCAGGGTCAGCCTCTCTCCACCCCTTTGTGACCAAGCTTaGGCAAAAGTCAGCAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: QPRVGRRTRRLRVSLSPPLCDQA*AKVSKF Trigger: AAACTTGCTGACTTTTGCCAAAGCTTGGTCACAAAG...GGGTGGAGAGAGGCTGACCCTGAGCCGCCTGGTTCTCCTGCCGACCCGAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR GCA 72 bp | GCAACGAGGATGGAACGGAATCAGTGTCCCGAAGCTTaGCTCCAGGGACGTGTGTCTGGCCAGTGTGATCTG | + |
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Preference number: 3 (lower is better) Translates to: ATRMERNQCPEA*LQGRVSGQCDL Trigger: CAGATCACACTGGCCAGACACACGTCCCTGGAGGCAAGCTTCGGGACACTGATTCCGTTCCATCCTCGTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR TCA 72 bp | ACCACTGACTCAGTGGTGCCTTTGGGTATGAATATCTaGGAAGGCGGCAAATGGCGGCACTGCGGACAGGCG | + |
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Preference number: 3 (lower is better) Translates to: TTDSVVPLGMNI*EGGKWRHCGQA Trigger: CGCCTGTCCGCAGTGCCGCCATTTGCCGCCTTCTCAGATATTCATACCCAAAGGCACCACTGAGTCAGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR TCA 72 bp | TCTGGGCCACCACTGACTCAGTGGTGCCTTTGGGTATaGATATCTGAGAAGGCGGCAAATGGCGGCACTGCG | + |
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Preference number: 3 (lower is better) Translates to: SGPPLTQWCLWV*ISEKAANGGTA Trigger: CGCAGTGCCGCCATTTGCCGCCTTCTCAGATATTCATACCCAAAGGCACCACTGAGTCAGTGGTGGCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CCA 72 bp | CTTGCCTCCAGGGACGTGTGTCTGGCCAGTGTGATCTaGAACCTCCTACCACAACACAGCGCAGCACAAATG | + |
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Preference number: 3 (lower is better) Translates to: LASRDVCLASVI*NLLPQHSAAQM Trigger: CATTTGTGCTGCGCTGTGTTGTGGTAGGAGGTTCCAGATCACACTGGCCAGACACACGTCCCTGGAGGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR GCA 72 bp | TCTGGAACCTCCTACCACAACACAGCGCAGCACAAATaGTCTGGGCACACAGTCAGTTCACCCCTCGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: SGTSYHNTAQHK*SGHTVSSPLGR Trigger: TCTTCCGAGGGGTGAACTGACTGTGTGCCCAGAGCATTTGTGCTGCGCTGTGTTGTGGTAGGAGGTTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR GCA 72 bp | CACCAACACCCACACCCTCAGGCAGGTTCAGGCGCGTaGACACACACAGAGGAAACCTCAGTACTGATTTCT | + |
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Preference number: 3 (lower is better) Translates to: HQHPHPQAGSGA*THTEETSVLIS Trigger: AGAAATCAGTACTGAGGTTTCCTCTGTGTGTGTGCACGCGCCTGAACCTGCCTGAGGGTGTGGGTGTTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR TCA 72 bp | GTCCTAACCCTCATCACTCCCAGTCTGGGCCACCACTaGCTCAGTGGTGCCTTTGGGTATGAATATCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: VLTLITPSLGHH*LSGAFGYEYLR Trigger: TCTCAGATATTCATACCCAAAGGCACCACTGAGTCAGTGGTGGCCCAGACTGGGAGTGATGAGGGTTAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CCA 72 bp | GAAGTGCACAGGCACCGGCACAGGGAGATCGGCTTGTaGATCTTAGACAAACACATTTTATCACAGCCTCGG | + |
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Preference number: 3 (lower is better) Translates to: EVHRHRHREIGL*ILDKHILSQPR Trigger: CCGAGGCTGTGATAAAATGTGTTTGTCTAAGATCCACAAGCCGATCTCCCTGTGCCGGTGCCTGTGCACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR TCA 72 bp | TGCTCCATCTTCTCCTTACTGTTACAGTCCTGCTTGTaGTGGCCGAGAGCCATGTGTGAAGCAGCTCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: CSIFSLLLQSCL*WPRAMCEAALC Trigger: ACAAAGAGCTGCTTCACACATGGCTCTCGGCCATCACAAGCAGGACTGTAACAGTAAGGAGAAGATGGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR GCA 72 bp | GGGTTCTTTGACTGGATTTGGTTAACCAACCCCTCCTaGCCAGCTCATTATTCAGATGGAAGGGGAGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: GFFDWIWLTNPS*PAHYSDGRGGR Trigger: TCTTCCTCCCCTTCCATCTGAATAATGAGCTGGGCAGGAGGGGTTGGTTAACCAAATCCAGTCAAAGAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR GCA 72 bp | ACTATGGTTCTGATCACATGGCTCAGAGGAGAAAAGTaGCTAGCAACGAGTCCTAACCCTCATCACTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: TMVLITWLRGEK*LATSPNPHHSQ Trigger: CTGGGAGTGATGAGGGTTAGGACTCGTTGCTAGGCACTTTTCTCCTCTGAGCCATGTGATCAGAACCATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CCA 72 bp | TGTGTCAGGAGCAACTCCACTATGGTTCTGATCACATaGCTCAGAGGAGAAAAGTGCCTAGCAACGAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: CVRSNSTMVLIT*LRGEKCLATSP Trigger: AGGACTCGTTGCTAGGCACTTTTCTCCTCTGAGCCATGTGATCAGAACCATAGTGGAGTTGCTCCTGACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR TCA 72 bp | CTTCTGTGGACAACTCTAGCTGCAACTCTGGGGACATaGGTGAGAGGAAAGGGTTCTTTGACTGGATTTGGT | + |
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Preference number: 3 (lower is better) Translates to: LLWTTLAATLGT*VRGKGSLTGFG Trigger: ACCAAATCCAGTCAAAGAACCCTTTCCTCTCACTCATGTCCCCAGAGTTGCAGCTAGAGTTGTCCACAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CCA 72 bp | ACAAAAAGGCTTGCTGTCCTGCTAGTCATAAACTACTaGAGATCACATAAAACCGACCCGGTGAAGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: TKRLAVLLVINY*RSHKTDPVKAV Trigger: CACTGCCTTCACCGGGTCGGTTTTATGTGATCTCCAGTAGTTTATGACTAGCAGGACAGCAAGCCTTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR CAA 90 bp | TTGTGGATCTTAGACAAACACATTTTATCACAGCCTCGGGTCGGCAGGAGAACCCAAAAGTCAGCAAGTTaGTCAAAGGCAAAACCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LWILDKHILSQPRVGRRTQKSAS*SKAKPF Trigger: GAAGGGTTTTGCCTTTGACAAACTTGCTGACTTTTG...GGTTCTCCTGCCGACCCGAGGCTGTGATAAAATGTGTTTGTCTAAGATCCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR CAA 90 bp | AAAAGTTCTGCATTCTTGCAGACCCTTCGAAAAGCCAGTCCTCCCAGAAGCCAGCATAGCAGTAAGGACTaGAATGAGAATCATGAAACT | + |
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Preference number: 3 (lower is better) Translates to: KSSAFLQTLRKASPPRSQHSSKD*NENHET Trigger: AGTTTCATGATTCTCATTCAAGTCCTTACTGCTATG...CTGGCTTCTGGGAGGACTGGCTTTTCGAAGGGTCTGCAAGAATGCAGAACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR-3UTR CAA 90 bp | GATCGGCTTGTGGATCTTAGACAAACACATTTTATCACAGCCTCGGGTCGGCAGGAAAATGAGTCAGTTTaGAAATCTGCACAGCTGATA | + |
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Preference number: 3 (lower is better) Translates to: DRLVDLRQTHFITASGRQENESV*KSAQLI Trigger: TATCAGCTGTGCAGATTTCAAAACTGACTCATTTTC...CTGCCGACCCGAGGCTGTGATAAAATGTGTTTGTCTAAGATCCACAAGCCGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR GCA 72 bp | AACTGTTATGAACATCTGCCTTGTACAGAAAAGTTCTaGATTCTTGCAGACCCTTCGAAAAGCCAGTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: NCYEHLPCTEKF*ILADPSKSQSS Trigger: GGAGGACTGGCTTTTCGAAGGGTCTGCAAGAATGCAGAACTTTTCTGTACAAGGCAGATGTTCATAACAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR GCA 72 bp | GAAAAGGGAGCAGGTCTGATTCACAAAGAGTATACATaGATGACTCAAGATAATAATGACCTCCAAACGCAA | + |
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Preference number: 3 (lower is better) Translates to: EKGAGLIHKEYT*MTQDNNDLQTQ Trigger: TTGCGTTTGGAGGTCATTATTATCTTGAGTCATGCATGTATACTCTTTGTGAATCAGACCTGCTCCCTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS-3UTR TCA 90 bp | CCTCGGGTCGGCAGGAGAACCAGGCGGCTCAGGGTCAGCCTCTCTCCACCCGACGGGCACACCAAATCCTaGCACCCCTCCTCTCCTACT | + |
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Preference number: 4 (lower is better) Translates to: PRVGRRTRRLRVSLSPPDGHTKS*HPSSPT Trigger: AGTAGGAGAGGAGGGGTGTCAGGATTTGGTGTGCCC...GTCGGGTGGAGAGAGGCTGACCCTGAGCCGCCTGGTTCTCCTGCCGACCCGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS-3UTR CCA 90 bp | GCGGATGCAGGCCCCACAGCAGAGGAAGAGCTTCCTCAGCTGCTCCATCTTCTCCCAAGTCGGAAGCCCTaGCCCCAGTTGTGTCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: ADAGPTAEEELPQLLHLLPSRKP*PQLCLP Trigger: CGGGAGACACAACTGGGGCCAGGGCTTCCGACTTGG...GAGAAGATGGAGCAGCTGAGGAAGCTCTTCCTCTGCTGTGGGGCCTGCATCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS-3UTR TCA 90 bp | GACATCATTCAGAGCATACCAGCTACACCACACTGCGGCCAGCAGCCTGATTTCTGGCCGGGATGCTCCTaGACCAGTCCCCGATGTCCG | + |
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Preference number: 4 (lower is better) Translates to: DIIQSIPATPHCGQQPDFWPGCS*TSPRCP Trigger: CGGACATCGGGGACTGGTTCAGGAGCATCCCGGCCA...GAAATCAGGCTGCTGGCCGCAGTGTGGTGTAGCTGGTATGCTCTGAATGATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS-3UTR CCA 90 bp | GCGGATGCAGGCCCCACAGCAGAGGAAGAGCTTCCTCAGCTGCTCCATCTTCTCCAGAAATCCAGTCCCTaGGCCCACGGGGAAGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: ADAGPTAEEELPQLLHLLQKSSP*AHGEVK Trigger: TTTTACTTCCCCGTGGGCCCAGGGACTGGATTTCTG...GAGAAGATGGAGCAGCTGAGGAAGCTCTTCCTCTGCTGTGGGGCCTGCATCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CAA 72 bp | GTGGCAGTCCTTTCCGAAGGTGAGTCTCCACCTTCCTaGCACAGAAGTGCACAGGCACCGGCACAGGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: VAVLSEGESPPS*HRSAQAPAQGD Trigger: ATCTCCCTGTGCCGGTGCCTGTGCACTTCTGTGCAAGGAAGGTGGAGACTCACCTTCGGAAAGGACTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS-3UTR TCA 90 bp | TGTGATGGCCGAGAGCCATGTGTGAAGCAGCTCTTTGTGACCAAGCTTTGGCAAAGTAAAAGGTGGCAGTaGACGGCCTCCATATCTGGA | + |
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Preference number: 4 (lower is better) Translates to: CDGREPCVKQLFVTKLWQSKRWQ*TASISG Trigger: TCCAGATATGGAGGCCGTTCACTGCCACCTTTTACT...TTGCCAAAGCTTGGTCACAAAGAGCTGCTTCACACATGGCTCTCGGCCATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS-3UTR TCA 90 bp | GCAGAGGAAGAGCTTCCTCAGCTGCTCCATCTTCTCCTTACTGTTACAGTCCTGCCAGACGTAGAGCACTaGCATGATCAGAGGGATCAT | + |
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Preference number: 4 (lower is better) Translates to: AEEELPQLLHLLLTVTVLPDVEH*HDQRDH Trigger: ATGATCCCTCTGATCATGTCAGTGCTCTACGTCTGG...CAGGACTGTAACAGTAAGGAGAAGATGGAGCAGCTGAGGAAGCTCTTCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS-3UTR CCA 90 bp | CCGAAGCTTGCCTCCAGGGACGTGTGTCTGGCCAGTGTGATCTGGAACCTCCTAACAAAAACTGAGGTGTaGACAGAAAATTCCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PKLASRDVCLASVIWNLLTKTEV*TENSFL Trigger: GAGGAAGGAATTTTCTGTCCACACCTCAGTTTTTGT...TAGGAGGTTCCAGATCACACTGGCCAGACACACGTCCCTGGAGGCAAGCTTCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS-3UTR CCA 90 bp | TTGTGGATCTTAGACAAACACATTTTATCACAGCCTCGGGTCGGCAGGAGAACCCCCCTCCTCTCCTACTaGGTAGCCAGCGGTACAAAA | + |
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Preference number: 4 (lower is better) Translates to: LWILDKHILSQPRVGRRTPLLSY*VASGTK Trigger: TTTTGTACCGCTGGCTACCCAGTAGGAGAGGAGGGG...GGTTCTCCTGCCGACCCGAGGCTGTGATAAAATGTGTTTGTCTAAGATCCACAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CAA 72 bp | ACAGAAGTGCACAGGCACCGGCACAGGGAGATCGGCTaGTGGATCTTAGACAAACACATTTTATCACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: TEVHRHRHREIG*WILDKHILSQP Trigger: AGGCTGTGATAAAATGTGTTTGTCTAAGATCCACAAGCCGATCTCCCTGTGCCGGTGCCTGTGCACTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS-3UTR TCA 90 bp | GTGAAGCAGCTCTTTGTGACCAAGCTTTGGCAAAAGTCAGCAAGTTTGTCAAAGCGTAGAGCACTGACATaGTCAGAGGGATCATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VKQLFVTKLWQKSASLSKRRALT*SEGSSA Trigger: TGCTGATGATCCCTCTGATCATGTCAGTGCTCTACG...CTTTGACAAACTTGCTGACTTTTGCCAAAGCTTGGTCACAAAGAGCTGCTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CAA 72 bp | AGAGCCATGTGTGAAGCAGCTCTTTGTGACCAAGCTTaGGCAAAAGTCAGCAAGTTTGTCAAAGGCAAAACC | + |
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Preference number: 4 (lower is better) Translates to: RAMCEAALCDQA*AKVSKFVKGKT Trigger: GGTTTTGCCTTTGACAAACTTGCTGACTTTTGCCAAAGCTTGGTCACAAAGAGCTGCTTCACACATGGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS-3UTR GCA 90 bp | ACTCAAGATAATAATGACCTCCAAACGCAAATGATCCTAAAGCTATTGGAACCTGGGATCATCAGCAGCTaGATATCCATTGCTAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TQDNNDLQTQMILKLLEPGIISS*ISIAKP Trigger: TGGCTTAGCAATGGATATGCAGCTGCTGATGATCCC...AGGTTCCAATAGCTTTAGGATCATTTGCGTTTGGAGGTCATTATTATCTTGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CAA 72 bp | TTACCTTGTGAAGTCAACACTCAAAACCGGCTCACTTaGGTAAAACTATCCTGGAAGGATAATAAAGTTATC | + |
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Preference number: 4 (lower is better) Translates to: LPCEVNTQNRLT*VKLSWKDNKVI Trigger: GATAACTTTATTATCCTTCCAGGATAGTTTTACCAAAGTGAGCCGGTTTTGAGTGTTGACTTCACAAGGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS-3UTR TCA 90 bp | AATAAAGTTATCAGCTTCCTAATCAGGTCCAGGGGAAAAACTGTTATGAACATCAGTCCATTGGGTATCTaGACATCAGGAAGAAATAAA | + |
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Preference number: 4 (lower is better) Translates to: NKVISFLIRSRGKTVMNISPLGI*TSGRNK Trigger: TTTATTTCTTCCTGATGTTCAGATACCCAATGGACT...GATGTTCATAACAGTTTTTCCCCTGGACCTGATTAGGAAGCTGATAACTTTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| 3UTR CAA 72 bp | AATAATGACCTCCAAACGCAAATGATCCTAAAGCTATaGGAACCTCTAATTATGAGTGACTCATTCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: NNDLQTQMILKL*EPLIMSDSFRC Trigger: ACATCTGAATGAGTCACTCATAATTAGAGGTTCCAATAGCTTTAGGATCATTTGCGTTTGGAGGTCATTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS TCA 90 bp | CGATCAGGTCTCTGTTCAGCTGGGCCCAGACGTAGAGCACTGACATaGTCAGAGGGATCATCAGCAGCTGCATATCCATTGCTAAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RSGLCSAGPRRRALT*SEGSSAAAYPLLSQ Trigger: CTGGCTTAGCAATGGATATGCAGCTGCTGATGATCCCTCTGATCATGTCAGTGCTCTACGTCTGGGCCCAGCTGAACAGAGACCTGATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS TCA 90 bp | GCTGGCCTCCCGTCAAAAGCTCCTGCTTCAAGCCGAGTAGAATACTaGTATAAGAAATATAAATTGACCAAATACAGAAATCCAGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: AGLPSKAPASSRVEY*YKKYKLTKYRNPVP Trigger: AGGGACTGGATTTCTGTATTTGGTCAATTTATATTTCTTATATCAGTATTCTACTCGGCTTGAAGCAGGAGCTTTTGACGGGAGGCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS TCA 72 bp | CAGTCCCTGGGCCCACGGGGAAGTAAAAGGTGGCAGTaGACGGCCTCCATATCTGGAAGCGATAGAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: QSLGPRGSKRWQ*TASISGSDRGR Trigger: CCTTCCTCTATCGCTTCCAGATATGGAGGCCGTTCACTGCCACCTTTTACTTCCCCGTGGGCCCAGGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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| CDS TCA 72 bp | CTCTGTTCAGCTGGGCCCAGACGTAGAGCACTGACATaGTCAGAGGGATCATCAGCAGCTGCATATCCATTG | + |
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Preference number: 6 (lower is better) Translates to: LCSAGPRRRALT*SEGSSAAAYPL Trigger: CAATGGATATGCAGCTGCTGATGATCCCTCTGATCATGTCAGTGCTCTACGTCTGGGCCCAGCTGAACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022993.7 |
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