Pregenerated sensors for DERA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030225Ensembl transcript IDs: ENSMUST00000087675.9, ENSMUST00000203216.3, ENSMUST00000203507.2, ENSMUST00000203693.3, ENSMUST00000204356.2, ENSMUST00000204723.2, ENSMUST00000204779.3
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTTGGAGCCGGCTCTCCCCGTCCACCCTGTGGTTGCTCAGAGCTaGACAGGTGTGCCAGGTTTGGTAGCAAGCACCCTTCCCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: PLEPALPVHPVVAQS*TGVPGLVASTLPST Trigger: TGTGGAGGGAAGGGTGCTTGCTACCAAACCTGGCACACCTGTTCAGCTCTGAGCAACCACAGGGTGGACGGGGAGAGCCGGCTCCAAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| 3UTR CCA 90 bp | CTGACTCAGTGGCTGACTCAGTGGCTGACTCAGTGGCTGACTCAGTaGCTGACTCAGTGGCTAGACTCAGTGGCTGACTCAAGCGCCACC | + |
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Preference number: 1 (lower is better) Translates to: LTQWLTQWLTQWLTQ*LTQWLDSVADSSAT Trigger: GGTGGCGCTTGAGTCAGCCACTGAGTCTAGCCACTGAGTCAGCCACTGAGTCAGCCACTGAGTCAGCCACTGAGTCAGCCACTGAGTCAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204723.2 |
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| 3UTR CCA 90 bp | CTGACTCAGTGGCTGACTCAGTGGCTGACTCAGTGGCTGACTCAGTaGCTAGACTCAGTGGCTGACTCAAGCGCCACCACGCTTGTTTGC | + |
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Preference number: 1 (lower is better) Translates to: LTQWLTQWLTQWLTQ*LDSVADSSATTLVC Trigger: GCAAACAAGCGTGGTGGCGCTTGAGTCAGCCACTGAGTCTAGCCACTGAGTCAGCCACTGAGTCAGCCACTGAGTCAGCCACTGAGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204723.2 |
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| 3UTR GCA 90 bp | TGTGCCAGGTTTGGTAGCAAGCACCCTTCCCTCCACAGCCCTGCCTaGCCTAGGATCTCAGGTCTCAGGCAACTTAACTTCACTGTACGT | + |
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Preference number: 1 (lower is better) Translates to: CARFGSKHPSLHSPA*PRISGLRQLNFTVR Trigger: ACGTACAGTGAAGTTAAGTTGCCTGAGACCTGAGATCCTAGGGCAGGCAGGGCTGTGGAGGGAAGGGTGCTTGCTACCAAACCTGGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| 3UTR CCA 90 bp | CAGAAATATGGTAGCAAAGGTTCAGAGGAAAAGAAGACAAGACAGTaGCTAGACTCAGTGGCTGACTCAGTGGCTGACTCAGTGGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: QKYGSKGSEEKKTRQ*LDSVADSVADSVAD Trigger: GTCAGCCACTGAGTCAGCCACTGAGTCAGCCACTGAGTCTAGCCACTGTCTTGTCTTCTTTTCCTCTGAACCTTTGCTACCATATTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204723.2 |
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| 3UTR CCA 90 bp | CTAATTTGGTGGAGAAGATTTCAAGAAAGTAAAAGAGCCAGGCTGTaGCAGTTAGTGGCGACTGCATTTATTCATGTTTCTAGTAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: LIWWRRFQESKRARL*QLVATAFIHVSSKN Trigger: ATTCTTACTAGAAACATGAATAAATGCAGTCGCCACTAACTGCCACAGCCTGGCTCTTTTACTTTCTTGAAATCTTCTCCACCAAATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| 3UTR TCA 90 bp | AATAAATGTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTaGTCTGAATCCACATTTAGATTCAGCTGGTTTGTTTCCCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: NKCRPPGNEDHFNLS*SESTFRFSWFVSLY Trigger: ATAAAGGGAAACAAACCAGCTGAATCTAAATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTACATTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204356.2 ENSMUST00000204779.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCGGCTCTCCCCGTCCACCCTGTGGTTGCTCAGAGCTGAACAGGTGTGCCCTCCACAGCCCTGCCTaGCCTAGGATCTCAGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: GAGSPRPPCGCSELNRCALHSPA*PRISGL Trigger: GAGACCTGAGATCCTAGGGCAGGCAGGGCTGTGGAG...GGCACACCTGTTCAGCTCTGAGCAACCACAGGGTGGACGGGGAGAGCCGGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCGGCTCTCCCCGTCCACCCTGTGGTTGCTCAGAGCTGAACAGGTGTGCCAGTTCCCTTTATTGTTTTaGGTTGATTTCAGGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: SRLSPSTLWLLRAEQVCQFPLLF*VDFRGD Trigger: ATCTCCCCTGAAATCAACTCAAAACAATAAAGGGAA...CTGGCACACCTGTTCAGCTCTGAGCAACCACAGGGTGGACGGGGAGAGCCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGAATGTCAGAGGCCAGCCTTTGGAGCCGGCTCTCCCCGTCCACCCTGTGGTCATTTCAACCTTTCCTaGTCTGAATCCACATTTAGA | + |
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Preference number: 2 (lower is better) Translates to: CECQRPAFGAGSPRPPCGHFNLS*SESTFR Trigger: TCTAAATGTGGATTCAGATCAGGAAAGGTTGAAATG...ACCACAGGGTGGACGGGGAGAGCCGGCTCCAAAGGCTGGCCTCTGACATTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| 3UTR-3UTR GCA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATCAATTTGTTGCAAGATaGTTTTCTGGGTTGGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VDLLVTKTISTFPDLNPHQFVAR*FSGLAA Trigger: AGCAGCCAACCCAGAAAAGCATCTTGCAACAAATTG...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204356.2 ENSMUST00000204779.3 |
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| 3UTR-3UTR TCA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATTTCCCTTTATTGTTTTaGGTTGATTTCAGGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: VDLLVTKTISTFPDLNPHFPLLF*VDFRGD Trigger: ATCTCCCCTGAAATCAACTCAAAACAATAAAGGGAA...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204356.2 ENSMUST00000204779.3 |
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| 3UTR-3UTR GCA 90 bp | GGGGAAAGTCAGTTAGCTGTTCCAAAATTACATAACCTTAGCAATTATGCAAAACAATTTGTTGCAAGATaGTTTTCTGGGTTGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GESQLAVPKLHNLSNYAKQFVAR*FSGLAA Trigger: AGCAGCCAACCCAGAAAAGCATCTTGCAACAAATTG...TTTTGCATAATTGCTAAGGTTATGTAATTTTGGAACAGCTAACTGACTTTCCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204356.2 ENSMUST00000204779.3 |
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| 3UTR-3UTR CAA 90 bp | CAGAGAGTCAGGTGGACACCCGGGGCAGGGCTCCACATTGGTAGGCAGCACAGGGTCAGAGGCCAGCCTTaGGAGCCGGCTCTCCCCGTC | + |
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Preference number: 3 (lower is better) Translates to: QRVRWTPGAGLHIGRQHRVRGQP*EPALPV Trigger: GACGGGGAGAGCCGGCTCCAAAGGCTGGCCTCTGAC...CCTGTGCTGCCTACCAATGTGGAGCCCTGCCCCGGGTGTCCACCTGACTCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| 3UTR CCA 72 bp | GCCAGCCTTTGGAGCCGGCTCTCCCCGTCCACCCTGTaGTTGCTCAGAGCTGAACAGGTGTGCCAGGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: ASLWSRLSPSTL*LLRAEQVCQVW Trigger: CCAAACCTGGCACACCTGTTCAGCTCTGAGCAACCACAGGGTGGACGGGGAGAGCCGGCTCCAAAGGCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| 3UTR CCA 72 bp | TGGCTGACTCAGTGGCTGACTCAGTGGCTGACTCAGTaGCTAGACTCAGTGGCTGACTCAAGCGCCACCACG | + |
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Preference number: 3 (lower is better) Translates to: WLTQWLTQWLTQ*LDSVADSSATT Trigger: CGTGGTGGCGCTTGAGTCAGCCACTGAGTCTAGCCACTGAGTCAGCCACTGAGTCAGCCACTGAGTCAGCCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204723.2 |
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| 3UTR TCA 72 bp | GACTCAGTGGCTGACTCAGTGGCTAGACTCAGTGGCTaGCTCAAGCGCCACCACGCTTGTTTGCTGGAATCC | + |
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Preference number: 3 (lower is better) Translates to: DSVADSVARLSG*LKRHHACLLES Trigger: GGATTCCAGCAAACAAGCGTGGTGGCGCTTGAGTCAGCCACTGAGTCTAGCCACTGAGTCAGCCACTGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204723.2 |
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| 3UTR CCA 72 bp | CGGAGGACCTGGGTTTGGTTCCCAGAATCCACATGGTaGCTGACAATTCCAGTTCCAGGGAATCTGATGCCA | + |
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Preference number: 3 (lower is better) Translates to: RRTWVWFPESTW*LTIPVPGNLMP Trigger: TGGCATCAGATTCCCTGGAACTGGAATTGTCAGCCACCATGTGGATTCTGGGAACCAAACCCAGGTCCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| 3UTR TCA 72 bp | ATTTATTATGTGTCAGAGGTAGGGGACACGAATGTGTaGATGTCAGAGGCCAGCCTTTGGAGCCGGCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: IYYVSEVGDTNV*MSEASLWSRLS Trigger: GGAGAGCCGGCTCCAAAGGCTGGCCTCTGACATTCACACATTCGTGTCCCCTACCTCTGACACATAATAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| 3UTR GCA 72 bp | GACTCAGTGGCTGACTCAAGCGCCACCACGCTTGTTTaGTGGAATCCGTCGGAGATTTCAAGGGTAATGATT | + |
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Preference number: 3 (lower is better) Translates to: DSVADSSATTLV*WNPSEISRVMI Trigger: AATCATTACCCTTGAAATCTCCGACGGATTCCAGCAAACAAGCGTGGTGGCGCTTGAGTCAGCCACTGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204723.2 |
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| 3UTR CCA 72 bp | GGTAGCAAAGGTTCAGAGGAAAAGAAGACAAGACAGTaGCTAGACTCAGTGGCTGACTCAGTGGCTGACTCA | + |
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Preference number: 3 (lower is better) Translates to: GSKGSEEKKTRQ*LDSVADSVADS Trigger: TGAGTCAGCCACTGAGTCAGCCACTGAGTCTAGCCACTGTCTTGTCTTCTTTTCCTCTGAACCTTTGCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204723.2 |
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| 3UTR-3UTR CAA 90 bp | GGCAGAGTATCCTCTTGCTATAGCACCCATTCTCATTTTTATCACAGTTTTAAGACAGGTGTGCCAGGTTaGGTAGCAAGCACCCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: GRVSSCYSTHSHFYHSFKTGVPG*VASTLP Trigger: GGGAAGGGTGCTTGCTACCAAACCTGGCACACCTGT...CTTAAAACTGTGATAAAAATGAGAATGGGTGCTATAGCAAGAGGATACTCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| 3UTR CCA 72 bp | TGGAGAAGATTTCAAGAAAGTAAAAGAGCCAGGCTGTaGCAGTTAGTGGCGACTGCATTTATTCATGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: WRRFQESKRARL*QLVATAFIHVS Trigger: AGAAACATGAATAAATGCAGTCGCCACTAACTGCCACAGCCTGGCTCTTTTACTTTCTTGAAATCTTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| CDS-3UTR TCA 90 bp | GGAGCCGGCTCTCCCCGTCCACCCTGTGGTTGCTCAGAGCTGAACAGGTGTGCCAAAGCCAGTGGCCACTaGGGCCACGGGGATGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GAGSPRPPCGCSELNRCAKASGH*GHGDAA Trigger: TGCAGCATCCCCGTGGCCTCAGTGGCCACTGGCTTT...GGCACACCTGTTCAGCTCTGAGCAACCACAGGGTGGACGGGGAGAGCCGGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR CCA 90 bp | GGAGCCGGCTCTCCCCGTCCACCCTGTGGTTGCTCAGAGCTGAACAGGTGTGCCCAGCTGGAAAGCCAGTaGCCACTGAGGCCACGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GAGSPRPPCGCSELNRCAQLESQ*PLRPRG Trigger: TCCCCGTGGCCTCAGTGGCCACTGGCTTTCCAGCTG...GGCACACCTGTTCAGCTCTGAGCAACCACAGGGTGGACGGGGAGAGCCGGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR GCA 90 bp | CACAGAGAGTCAGGTGGACACCCGGGGCAGGGCTCCACATTGGTAGGCAGCACACGCCAGGGACTCCTTTaGAGTGCGGATGCCTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: HRESGGHPGQGSTLVGSTRQGLL*SADASG Trigger: GCCGGAGGCATCCGCACTGCAAAGGAGTCCCTGGCG...TGTGCTGCCTACCAATGTGGAGCCCTGCCCCGGGTGTCCACCTGACTCTCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR CCA 90 bp | AGGGGACACGAATGTGTGAATGTCAGAGGCCAGCCTTTGGAGCCGGCTCTCCCCCGAGCCTGGATCTGCTaGGCCCGCCTCAGCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: RGHECVNVRGQPLEPALPRAWIC*ARLSTA Trigger: GGCTGTGCTGAGGCGGGCCCAGCAGATCCAGGCTCG...GGGGAGAGCCGGCTCCAAAGGCTGGCCTCTGACATTCACACATTCGTGTCCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR TCA 90 bp | CAGAGAGTCAGGTGGACACCCGGGGCAGGGCTCCACATTGGTAGGCAGCACAGGCCTCCACGGCCAGTCTaGTCTCTTCCAATCGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: QRVRWTPGAGLHIGRQHRPPRPV*SLPIES Trigger: AGACTCGATTGGAAGAGATCAGACTGGCCGTGGAGG...CCTGTGCTGCCTACCAATGTGGAGCCCTGCCCCGGGTGTCCACCTGACTCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| 3UTR CAA 72 bp | AGGGGACACGAATGTGTGAATGTCAGAGGCCAGCCTTaGGAGCCGGCTCTCCCCGTCCACCCTGTGGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: RGHECVNVRGQP*EPALPVHPVVA Trigger: AGCAACCACAGGGTGGACGGGGAGAGCCGGCTCCAAAGGCTGGCCTCTGACATTCACACATTCGTGTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR GCA 90 bp | CCCTCCACAGCCCTGCCTGCCCTAGGATCTCAGGTCTCAGGCAACTTAACTTCAGGGACTCCTTTGCAGTaGGGATGCCTCCGGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PSTALPALGSQVSGNLTSGTPLQ*GCLRQA Trigger: AGCCTGCCGGAGGCATCCGCACTGCAAAGGAGTCCC...TGAAGTTAAGTTGCCTGAGACCTGAGATCCTAGGGCAGGCAGGGCTGTGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCACAGCCCTGCCTGCCCTAGGATCTCAGGTCTCAGGCAACTTAACTTCACCCGCAGCATCACGATaGCGACTGGGAAGGTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: PSTALPALGSQVSGNLTSPAASR*RLGRWR Trigger: ACGCCACCTTCCCAGTCGCCATCGTGATGCTGCGGG...TGAAGTTAAGTTGCCTGAGACCTGAGATCCTAGGGCAGGCAGGGCTGTGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR CCA 90 bp | TTTCGGAGGACCTGGGTTTGGTTCCCAGAATCCACATGGTGGCTGACAATTCCACCCGCAGCATCACGATaGCGACTGGGAAGGTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: FRRTWVWFPESTWWLTIPPAASR*RLGRWR Trigger: ACGCCACCTTCCCAGTCGCCATCGTGATGCTGCGGG...TGGAATTGTCAGCCACCATGTGGATTCTGGGAACCAAACCCAGGTCCTCCGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| CDS-3UTR TCA 90 bp | CAGAGAGTCAGGTGGACACCCGGGGCAGGGCTCCACATTGGTAGGCAGCACAGGAATCGAGTCTTTAAATaGGTCTGTCCAGCTGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: QRVRWTPGAGLHIGRQHRNRVFK*VCPAGK Trigger: CTTTCCAGCTGGACAGACTCATTTAAAGACTCGATT...CCTGTGCTGCCTACCAATGTGGAGCCCTGCCCCGGGTGTCCACCTGACTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR TCA 90 bp | AGCCGGCTCTCCCCGTCCACCCTGTGGTTGCTCAGAGCTGAACAGGTGTGCCAGGGTCTTAATAAAATCTaGTCCTGCCATCATCGCTAC | + |
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Preference number: 4 (lower is better) Translates to: SRLSPSTLWLLRAEQVCQGLNKI*SCHHRY Trigger: GTAGCGATGATGGCAGGATCAGATTTTATTAAGACC...CTGGCACACCTGTTCAGCTCTGAGCAACCACAGGGTGGACGGGGAGAGCCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR GCA 90 bp | CACAGCCCTGCCTGCCCTAGGATCTCAGGTCTCAGGCAACTTAACTTCACTGTAAGGAGCCACGCAGCCTaGCATTCCTTCTTCACGCTT | + |
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Preference number: 4 (lower is better) Translates to: HSPACPRISGLRQLNFTVRSHAA*HSFFTL Trigger: AAGCGTGAAGAAGGAATGGCAGGCTGCGTGGCTCCT...TACAGTGAAGTTAAGTTGCCTGAGACCTGAGATCCTAGGGCAGGCAGGGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR CCA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATCGAGCCTGGATCTGCTaGGCCCGCCTCAGCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: VDLLVTKTISTFPDLNPHRAWIC*ARLSTA Trigger: GGCTGTGCTGAGGCGGGCCCAGCAGATCCAGGCTCG...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000204356.2 |
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| CDS-3UTR CCA 90 bp | CACAGAGAGTCAGGTGGACACCCGGGGCAGGGCTCCACATTGGTAGGCAGCACAGAGGTCTGCCCGGATTaGATATTTGGCTTTATAACA | + |
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Preference number: 4 (lower is better) Translates to: HRESGGHPGQGSTLVGSTEVCPD*IFGFIT Trigger: TGTTATAAAGCCAAATATCCAATCCGGGCAGACCTC...TGTGCTGCCTACCAATGTGGAGCCCTGCCCCGGGTGTCCACCTGACTCTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| 3UTR CAA 72 bp | CTAAGAGCACTTGCCGTGCTTTCGGAGGACCTGGGTTaGGTTCCCAGAATCCACATGGTGGCTGACAATTCC | + |
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Preference number: 4 (lower is better) Translates to: LRALAVLSEDLG*VPRIHMVADNS Trigger: GGAATTGTCAGCCACCATGTGGATTCTGGGAACCAAACCCAGGTCCTCCGAAAGCACGGCAAGTGCTCTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| CDS-3UTR GCA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATCGCCAGGGACTCCTTTaGAGTGCGGATGCCTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: VDLLVTKTISTFPDLNPHRQGLL*SADASG Trigger: GCCGGAGGCATCCGCACTGCAAAGGAGTCCCTGGCG...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204779.3 |
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| CDS-3UTR CCA 90 bp | TGTGAATGTCAGAGGCCAGCCTTTGGAGCCGGCTCTCCCCGTCCACCCTGTGGTCCCGGATTGGATATTTaGCTTTATAACAGAGTCGTT | + |
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Preference number: 4 (lower is better) Translates to: CECQRPAFGAGSPRPPCGPGLDI*LYNRVV Trigger: AACGACTCTGTTATAAAGCCAAATATCCAATCCGGG...ACCACAGGGTGGACGGGGAGAGCCGGCTCCAAAGGCTGGCCTCTGACATTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR CCA 90 bp | GAGGACCTGGGTTTGGTTCCCAGAATCCACATGGTGGCTGACAATTCCAGTTCCAGGATGGTTTTGAGATaGGCCTCGCCACAGGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: EDLGLVPRIHMVADNSSSRMVLR*ASPQAF Trigger: AAAGGCCTGTGGCGAGGCCCATCTCAAAACCATCCT...GGAACTGGAATTGTCAGCCACCATGTGGATTCTGGGAACCAAACCCAGGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| CDS-3UTR TCA 90 bp | CAGAAAGCAGAGCAAAGCATATGCAGTTTGGTAGAAAGGGAAACTGTTAGGTGGAAAGCCAGTGGCCACTaGGGCCACGGGGATGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QKAEQSICSLVERETVRWKASGH*GHGDAA Trigger: TGCAGCATCCCCGTGGCCTCAGTGGCCACTGGCTTT...CCACCTAACAGTTTCCCTTTCTACCAAACTGCATATGCTTTGCTCTGCTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| CDS-3UTR GCA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATGGGACTCCTTTGCAGTaGGGATGCCTCCGGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VDLLVTKTISTFPDLNPHGTPLQ*GCLRQA Trigger: AGCCTGCCGGAGGCATCCGCACTGCAAAGGAGTCCC...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204779.3 |
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| CDS-3UTR CCA 90 bp | AAAACTCTACCTACATTTTGCCCATGTCCTGAAAGTCTGAGTCAAGACCAAAGTCGAGCCTGGATCTGCTaGGCCCGCCTCAGCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: KTLPTFCPCPESLSQDQSRAWIC*ARLSTA Trigger: GGCTGTGCTGAGGCGGGCCCAGCAGATCCAGGCTCG...ACTTTGGTCTTGACTCAGACTTTCAGGACATGGGCAAAATGTAGGTAGAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| CDS-3UTR CCA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATCCCGCAGCATCACGATaGCGACTGGGAAGGTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: VDLLVTKTISTFPDLNPHPAASR*RLGRWR Trigger: ACGCCACCTTCCCAGTCGCCATCGTGATGCTGCGGG...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204779.3 |
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| CDS-3UTR TCA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATTGCCTCCGGCAGGCTTaGAGCCCACCTTGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VDLLVTKTISTFPDLNPHCLRQA*SPPCFQ Trigger: CTGGAAACAAGGTGGGCTTCAAGCCTGCCGGAGGCA...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204779.3 |
||
| CDS-3UTR TCA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATCTCCTAGTTCCTCCTTaGCCAGGGAGAGCCACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VDLLVTKTISTFPDLNPHLLVPP*PGRATP Trigger: TGGCGTGGCTCTCCCTGGTCAAGGAGGAACTAGGAG...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204356.2 ENSMUST00000204779.3 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGGTGTCTTGAAGGCATCCCAAGATTTGACAAAATCCACTTACCATAAGCGCCAGGGACTCCTTTaGAGTGCGGATGCCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKGVLKASQDLTKSTYHKRQGLL*SADASG Trigger: GCCGGAGGCATCCGCACTGCAAAGGAGTCCCTGGCG...CTTATGGTAAGTGGATTTTGTCAAATCTTGGGATGCCTTCAAGACACCCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203507.2 |
||
| CDS-3UTR TCA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATCTGTCTCTCGATGTCTaGGAGCAGAGAACTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VDLLVTKTISTFPDLNPHLSLDV*EQRTGP Trigger: GGGGCCAGTTCTCTGCTCTCAGACATCGAGAGACAG...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204356.2 ENSMUST00000204779.3 |
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| CDS-3UTR GCA 90 bp | AAGGGTGTCTTGAAGGCATCCCAAGATTTGACAAAATCCACTTACCATAAGCTTGGGACTCCTTTGCAGTaGGGATGCCTCCGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGVLKASQDLTKSTYHKLGTPLQ*GCLRQA Trigger: AGCCTGCCGGAGGCATCCGCACTGCAAAGGAGTCCC...AAGCTTATGGTAAGTGGATTTTGTCAAATCTTGGGATGCCTTCAAGACACCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203507.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTTGCCCATGTCCTGAAAGTCTGAGTCAAGACCAAAGTAATGGATTATGGCAGCTGGAAAGCCAGTaGCCACTGAGGCCACGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TFCPCPESLSQDQSNGLWQLESQ*PLRPRG Trigger: TCCCCGTGGCCTCAGTGGCCACTGGCTTTCCAGCTG...CCATAATCCATTACTTTGGTCTTGACTCAGACTTTCAGGACATGGGCAAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
||
| CDS-3UTR CCA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATTCTGATCCTTCCCACTaGCCCGTCAGCACCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VDLLVTKTISTFPDLNPHSDPSH*PVSTKV Trigger: GACCTTGGTGCTGACGGGCCAGTGGGAAGGATCAGA...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204779.3 |
||
| CDS-3UTR TCA 90 bp | GAGGACCTGGGTTTGGTTCCCAGAATCCACATGGTGGCTGACAATTCCAGTTCCGGTCTTAATAAAATCTaGTCCTGCCATCATCGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: EDLGLVPRIHMVADNSSSGLNKI*SCHHRY Trigger: GTAGCGATGATGGCAGGATCAGATTTTATTAAGACC...GGAACTGGAATTGTCAGCCACCATGTGGATTCTGGGAACCAAACCCAGGTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
||
| CDS-3UTR TCA 90 bp | AAGGGTGTCTTGAAGGCATCCCAAGATTTGACAAAATCCACTTACCATAAGCTTTGCCTCCGGCAGGCTTaGAGCCCACCTTGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGVLKASQDLTKSTYHKLCLRQA*SPPCFQ Trigger: CTGGAAACAAGGTGGGCTTCAAGCCTGCCGGAGGCA...AAGCTTATGGTAAGTGGATTTTGTCAAATCTTGGGATGCCTTCAAGACACCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203507.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGCAGAGCAAAGCATATGCAGTTTGGTAGAAAGGGAAACTGTTAGGTGGAGGAGCCACGCAGCCTaGCATTCCTTCTTCACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKAEQSICSLVERETVRWRSHAA*HSFFTL Trigger: AAGCGTGAAGAAGGAATGGCAGGCTGCGTGGCTCCT...CCACCTAACAGTTTCCCTTTCTACCAAACTGCATATGCTTTGCTCTGCTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
||
| CDS-3UTR CCA 90 bp | CAGTGGCTGACTCAAGCGCCACCACGCTTGTTTGCTGGAATCCGTCGGAGATTTTTTGAAAGCCCAAAGTaGAATCAAGTTCACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QWLTQAPPRLFAGIRRRFFESPK*NQVHCL Trigger: GAGACAGTGAACTTGATTCCACTTTGGGCTTTCAAA...AAATCTCCGACGGATTCCAGCAAACAAGCGTGGTGGCGCTTGAGTCAGCCACTG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000204723.2 |
||
| CDS-3UTR TCA 90 bp | AATAGAAAGGGTGTCTTGAAGGCATCCCAAGATTTGACAAAATCCACTTACCATCTCCTAGTTCCTCCTTaGCCAGGGAGAGCCACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRKGVLKASQDLTKSTYHLLVPP*PGRATP Trigger: TGGCGTGGCTCTCCCTGGTCAAGGAGGAACTAGGAG...ATGGTAAGTGGATTTTGTCAAATCTTGGGATGCCTTCAAGACACCCTTTCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203507.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAAAGTCAGTTAGCTGTTCCAAAATTACATAACCTTAGCAATTATGCAAAACGCCAGGGACTCCTTTaGAGTGCGGATGCCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GESQLAVPKLHNLSNYAKRQGLL*SADASG Trigger: GCCGGAGGCATCCGCACTGCAAAGGAGTCCCTGGCG...TTTTGCATAATTGCTAAGGTTATGTAATTTTGGAACAGCTAACTGACTTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204779.3 |
||
| CDS-3UTR CCA 90 bp | TTTCGGAGGACCTGGGTTTGGTTCCCAGAATCCACATGGTGGCTGACAATTCCAGAGGTCTGCCCGGATTaGATATTTGGCTTTATAACA | + |
|
Preference number: 4 (lower is better) Translates to: FRRTWVWFPESTWWLTIPEVCPD*IFGFIT Trigger: TGTTATAAAGCCAAATATCCAATCCGGGCAGACCTC...TGGAATTGTCAGCCACCATGTGGATTCTGGGAACCAAACCCAGGTCCTCCGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
||
| CDS-3UTR TCA 90 bp | ACATTTTGCCCATGTCCTGAAAGTCTGAGTCAAGACCAAAGTAATGGATTATGGCCTCCACGGCCAGTCTaGTCTCTTCCAATCGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFCPCPESLSQDQSNGLWPPRPV*SLPIES Trigger: AGACTCGATTGGAAGAGATCAGACTGGCCGTGGAGG...CCATAATCCATTACTTTGGTCTTGACTCAGACTTTCAGGACATGGGCAAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| CDS-3UTR TCA 90 bp | CTTAACTTCACTGTACGTTCAGAATTTTCTGCAGTACAGGCTACTAGAAACATTTGCCTCCGGCAGGCTTaGAGCCCACCTTGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNFTVRSEFSAVQATRNICLRQA*SPPCFQ Trigger: CTGGAAACAAGGTGGGCTTCAAGCCTGCCGGAGGCA...AATGTTTCTAGTAGCCTGTACTGCAGAAAATTCTGAACGTACAGTGAAGTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
||
| CDS-3UTR TCA 90 bp | TTTCGGAGGACCTGGGTTTGGTTCCCAGAATCCACATGGTGGCTGACAATTCCAAGGCATCCCAAGATTTaGCAAAATCCACTTACCATA | + |
|
Preference number: 4 (lower is better) Translates to: FRRTWVWFPESTWWLTIPRHPKI*QNPLTI Trigger: TATGGTAAGTGGATTTTGTCAAATCTTGGGATGCCT...TGGAATTGTCAGCCACCATGTGGATTCTGGGAACCAAACCCAGGTCCTCCGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
||
| CDS-3UTR CCA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATTGGCGACTGGGAAGGTaGCGTTTACTGTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VDLLVTKTISTFPDLNPHWRLGR*RLLFPF Trigger: GAAAGGAAACAGTAAACGCCACCTTCCCAGTCGCCA...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204779.3 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGTCAGTTAGCTGTTCCAAAATTACATAACCTTAGCAATTATGCAAAACCCGCAGCATCACGATaGCGACTGGGAAGGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GESQLAVPKLHNLSNYAKPAASR*RLGRWR Trigger: ACGCCACCTTCCCAGTCGCCATCGTGATGCTGCGGG...TTTTGCATAATTGCTAAGGTTATGTAATTTTGGAACAGCTAACTGACTTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204779.3 |
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| CDS-3UTR TCA 90 bp | GAATCTGATGCCATCTTTTGGTGTCCACAGGCACTGTACACACAAGGCACACATAATCGAGTCTTTAAATaGGTCTGTCCAGCTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESDAIFWCPQALYTQGTHNRVFK*VCPAGK Trigger: CTTTCCAGCTGGACAGACTCATTTAAAGACTCGATT...ATGTGTGCCTTGTGTGTACAGTGCCTGTGGACACCAAAAGATGGCATCAGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
||
| CDS-3UTR TCA 90 bp | GGGGAAAGTCAGTTAGCTGTTCCAAAATTACATAACCTTAGCAATTATGCAAAATGCCTCCGGCAGGCTTaGAGCCCACCTTGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GESQLAVPKLHNLSNYAKCLRQA*SPPCFQ Trigger: CTGGAAACAAGGTGGGCTTCAAGCCTGCCGGAGGCA...TTTTGCATAATTGCTAAGGTTATGTAATTTTGGAACAGCTAACTGACTTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204779.3 |
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| CDS-3UTR TCA 90 bp | GGGGAAAGTCAGTTAGCTGTTCCAAAATTACATAACCTTAGCAATTATGCAAAACTCCTAGTTCCTCCTTaGCCAGGGAGAGCCACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GESQLAVPKLHNLSNYAKLLVPP*PGRATP Trigger: TGGCGTGGCTCTCCCTGGTCAAGGAGGAACTAGGAG...TTTTGCATAATTGCTAAGGTTATGTAATTTTGGAACAGCTAACTGACTTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204356.2 ENSMUST00000204779.3 |
||
| CDS-3UTR TCA 90 bp | CTTAACTTCACTGTACGTTCAGAATTTTCTGCAGTACAGGCTACTAGAAACATTCTGTCTCTCGATGTCTaGGAGCAGAGAACTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LNFTVRSEFSAVQATRNILSLDV*EQRTGP Trigger: GGGGCCAGTTCTCTGCTCTCAGACATCGAGAGACAG...AATGTTTCTAGTAGCCTGTACTGCAGAAAATTCTGAACGTACAGTGAAGTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR TCA 90 bp | AATAATAGAAAGGGTGTCTTGAAGGCATCCCAAGATTTGACAAAATCCACTTACCTGTCTCTCGATGTCTaGGAGCAGAGAACTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NNRKGVLKASQDLTKSTYLSLDV*EQRTGP Trigger: GGGGCCAGTTCTCTGCTCTCAGACATCGAGAGACAG...GTAAGTGGATTTTGTCAAATCTTGGGATGCCTTCAAGACACCCTTTCTATTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203507.2 |
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| CDS-3UTR TCA 90 bp | GGGGAAAGTCAGTTAGCTGTTCCAAAATTACATAACCTTAGCAATTATGCAAAACTGTCTCTCGATGTCTaGGAGCAGAGAACTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GESQLAVPKLHNLSNYAKLSLDV*EQRTGP Trigger: GGGGCCAGTTCTCTGCTCTCAGACATCGAGAGACAG...TTTTGCATAATTGCTAAGGTTATGTAATTTTGGAACAGCTAACTGACTTTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204356.2 ENSMUST00000204779.3 |
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| CDS-3UTR CCA 90 bp | GGCAGAGTATCCTCTTGCTATAGCACCCATTCTCATTTTTATCACAGTTTTAAGAGGATGGTTTTGAGATaGGCCTCGCCACAGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRVSSCYSTHSHFYHSFKRMVLR*ASPQAF Trigger: AAAGGCCTGTGGCGAGGCCCATCTCAAAACCATCCT...CTTAAAACTGTGATAAAAATGAGAATGGGTGCTATAGCAAGAGGATACTCTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR CCA 90 bp | ACATTTTGCCCATGTCCTGAAAGTCTGAGTCAAGACCAAAGTAATGGATTATGGTGGCGACTGGGAAGGTaGCGTTTACTGTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TFCPCPESLSQDQSNGLWWRLGR*RLLFPF Trigger: GAAAGGAAACAGTAAACGCCACCTTCCCAGTCGCCA...CCATAATCCATTACTTTGGTCTTGACTCAGACTTTCAGGACATGGGCAAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| CDS-3UTR TCA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATAATCGAGTCTTTAAATaGGTCTGTCCAGCTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VDLLVTKTISTFPDLNPHNRVFK*VCPAGK Trigger: CTTTCCAGCTGGACAGACTCATTTAAAGACTCGATT...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000204779.3 |
||
| CDS-3UTR TCA 90 bp | GGGGAAAGTCAGTTAGCTGTTCCAAAATTACATAACCTTAGCAATTATGCAAAACCTCCACGGCCAGTCTaGTCTCTTCCAATCGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GESQLAVPKLHNLSNYAKPPRPV*SLPIES Trigger: AGACTCGATTGGAAGAGATCAGACTGGCCGTGGAGG...TTTTGCATAATTGCTAAGGTTATGTAATTTTGGAACAGCTAACTGACTTTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000204779.3 |
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| CDS-3UTR CCA 90 bp | GGCAGAGTATCCTCTTGCTATAGCACCCATTCTCATTTTTATCACAGTTTTAAGTGGCGACTGGGAAGGTaGCGTTTACTGTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRVSSCYSTHSHFYHSFKWRLGR*RLLFPF Trigger: GAAAGGAAACAGTAAACGCCACCTTCCCAGTCGCCA...CTTAAAACTGTGATAAAAATGAGAATGGGTGCTATAGCAAGAGGATACTCTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGTCAGTTAGCTGTTCCAAAATTACATAACCTTAGCAATTATGCAAAATGGCGACTGGGAAGGTaGCGTTTACTGTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GESQLAVPKLHNLSNYAKWRLGR*RLLFPF Trigger: GAAAGGAAACAGTAAACGCCACCTTCCCAGTCGCCA...TTTTGCATAATTGCTAAGGTTATGTAATTTTGGAACAGCTAACTGACTTTCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204779.3 |
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| CDS-3UTR TCA 90 bp | GGGGAAAGTCAGTTAGCTGTTCCAAAATTACATAACCTTAGCAATTATGCAAAAGGTCTTAATAAAATCTaGTCCTTCCCACTGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GESQLAVPKLHNLSNYAKGLNKI*SFPLAR Trigger: ACGGGCCAGTGGGAAGGATCAGATTTTATTAAGACC...TTTTGCATAATTGCTAAGGTTATGTAATTTTGGAACAGCTAACTGACTTTCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000204779.3 |
||
| CDS-3UTR CCA 90 bp | AAAACTCTACCTACATTTTGCCCATGTCCTGAAAGTCTGAGTCAAGACCAAAGTCCCGGATTGGATATTTaGCTTTATAACAGAGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTLPTFCPCPESLSQDQSPGLDI*LYNRVV Trigger: AACGACTCTGTTATAAAGCCAAATATCCAATCCGGG...ACTTTGGTCTTGACTCAGACTTTCAGGACATGGGCAAAATGTAGGTAGAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
||
| 3UTR CAA 72 bp | AATAATAGAAAGGGTGTCTTGAAGGCATCCCAAGATTaGACAAAATCCACTTACCATAAGCTTCACAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NNRKGVLKASQD*TKSTYHKLHRK Trigger: TTTCCTGTGAAGCTTATGGTAAGTGGATTTTGTCAAATCTTGGGATGCCTTCAAGACACCCTTTCTATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203507.2 |
||
| CDS GCA 90 bp | TCTGTCCAGCTGGAAAGCCAGTGGCCACTGAGGCCACGGGGATGCTaGAGCCCGCAGCCTTCAGCGCCTTCACAGCGTCGCACACCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVQLESQWPLRPRGC*SPQPSAPSQRRTPG Trigger: CCCGGGTGTGCGACGCTGTGAAGGCGCTGAAGGCTGCGGGCTGCAGCATCCCCGTGGCCTCAGTGGCCACTGGCTTTCCAGCTGGACAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 |
||
| CDS GCA 90 bp | GAGTCTGTCCAGCTGGAAAGCCAGTGGCCACTGAGGCCACGGGGATaGTGCAGCCCGCAGCCTTCAGCGCCTTCACAGCGTCGCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: ESVQLESQWPLRPRG*CSPQPSAPSQRRTP Trigger: GGGTGTGCGACGCTGTGAAGGCGCTGAAGGCTGCGGGCTGCAGCATCCCCGTGGCCTCAGTGGCCACTGGCTTTCCAGCTGGACAGACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 |
||
| CDS-3UTR CAA 90 bp | CACAGAGAGTCAGGTGGACACCCGGGGCAGGGCTCCACATTGGTAGGCAGCACAACGCCAGGGACTCCTTaGCAGTGCGGATGCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HRESGGHPGQGSTLVGSTTPGTP*QCGCLR Trigger: CCGGAGGCATCCGCACTGCAAAGGAGTCCCTGGCGT...TGTGCTGCCTACCAATGTGGAGCCCTGCCCCGGGTGTCCACCTGACTCTCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
||
| CDS GCA 90 bp | CAGCTTTCAGGAGCCACGCAGCCTGCCATTCCTTCTTCACGCTTCTaGGAGCCTGGATCTGCTGGGCCCGCCTCAGCACAGCCGCGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QLSGATQPAIPSSRF*EPGSAGPASAQPRD Trigger: ATCACGCGGCTGTGCTGAGGCGGGCCCAGCAGATCCAGGCTCGCAGAAGCGTGAAGAAGGAATGGCAGGCTGCGTGGCTCCTGAAAGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 |
||
| CDS-3UTR CAA 90 bp | CAGAGAGTCAGGTGGACACCCGGGGCAGGGCTCCACATTGGTAGGCAGCACAGGTCTCCTAGTTCCTCCTaGACCAGGGAGAGCCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: QRVRWTPGAGLHIGRQHRSPSSS*TRESHA Trigger: GGCGTGGCTCTCCCTGGTCAAGGAGGAACTAGGAGA...CCTGTGCTGCCTACCAATGTGGAGCCCTGCCCCGGGTGTCCACCTGACTCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
||
| CDS TCA 90 bp | TCCGGAAGAGGTCAGGCGTCAGCCACTCATCTCCTAGTTCCTCCTTaGCCAGGGAGAGCCACGCCAGGGACTCCTTTGCAGTGCGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: SGRGQASATHLLVPP*PGRATPGTPLQCGC Trigger: GCATCCGCACTGCAAAGGAGTCCCTGGCGTGGCTCTCCCTGGTCAAGGAGGAACTAGGAGATGAGTGGCTGACGCCTGACCTCTTCCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000203507.2 ENSMUST00000204779.3 |
||
| CDS GCA 90 bp | TCTCCTAGTTCCTCCTTGACCAGGGAGAGCCACGCCAGGGACTCCTaGCATTCCTTCTTCACGCTTCTGCGAGCCTGGATCTGCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPSSSLTRESHARDS*HSFFTLLRAWICWA Trigger: GGCCCAGCAGATCCAGGCTCGCAGAAGCGTGAAGAAGGAATGGCAGGAGTCCCTGGCGTGGCTCTCCCTGGTCAAGGAGGAACTAGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204356.2 |
||
| CDS TCA 90 bp | TCCGGAAGAGGTCAGGCGTCAGCCACTCATCTCCTAGTTCCTCCTTaGCCAGGGAGAGCCACGCCAGGGACTCCTGCCATTCCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGRGQASATHLLVPP*PGRATPGTPAIPSS Trigger: TGAAGAAGGAATGGCAGGAGTCCCTGGCGTGGCTCTCCCTGGTCAAGGAGGAACTAGGAGATGAGTGGCTGACGCCTGACCTCTTCCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204356.2 |
||
| CDS TCA 90 bp | CCATCCTCCACGGCCAGTCTGATCTCTTCCAATCGAGTCTTTAAATaGGTCTGTCCAGCTGGAAAGCCAGTGGCCACTGAGGCCACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSSTASLISSNRVFK*VCPAGKPVATEATG Trigger: CCCCGTGGCCTCAGTGGCCACTGGCTTTCCAGCTGGACAGACTCATTTAAAGACTCGATTGGAAGAGATCAGACTGGCCGTGGAGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 |
||
| CDS TCA 90 bp | CGCGTAGCGTCCAGTCACGTGATGGTAAATCTGTCTCTCGATGTCTaGGAGCAGAGAACTGGCCCCTATCCGGAAGAGGTCAGGCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVASSHVMVNLSLDV*EQRTGPYPEEVRRQ Trigger: CTGACGCCTGACCTCTTCCGGATAGGGGCCAGTTCTCTGCTCTCAGACATCGAGAGACAGATTTACCATCACGTGACTGGACGCTACGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000203507.2 ENSMUST00000204356.2 ENSMUST00000204779.3 |
||
| CDS-3UTR CAA 90 bp | CCCTCCACAGCCCTGCCTGCCCTAGGATCTCAGGTCTCAGGCAACTTAACTTCAGTAGCTAGGATGGTTTaGAGATGGGCCTCGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PSTALPALGSQVSGNLTSVARMV*RWASPQ Trigger: CTGTGGCGAGGCCCATCTCAAAACCATCCTAGCTAC...TGAAGTTAAGTTGCCTGAGACCTGAGATCCTAGGGCAGGCAGGGCTGTGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS CCA 90 bp | TCACGTGATGGTAAATCTGTCTCTCGATGTCTGAGAGCAGAGAACTaGCCCCTATCCGGAAGAGGTCAGGCGTCAGCCACTCATCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: SRDGKSVSRCLRAEN*PLSGRGQASATHLL Trigger: TAGGAGATGAGTGGCTGACGCCTGACCTCTTCCGGATAGGGGCCAGTTCTCTGCTCTCAGACATCGAGAGACAGATTTACCATCACGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000203507.2 ENSMUST00000204356.2 ENSMUST00000204779.3 |
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| CDS-3UTR CAA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATACGCCAGGGACTCCTTaGCAGTGCGGATGCCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: VDLLVTKTISTFPDLNPHTPGTP*QCGCLR Trigger: CCGGAGGCATCCGCACTGCAAAGGAGTCCCTGGCGT...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204779.3 |
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| CDS-3UTR CAA 90 bp | CACAGCCCTGCCTGCCCTAGGATCTCAGGTCTCAGGCAACTTAACTTCACTGTAGGCTTGAAGCCCACCTaGTTTCCAGTTTTCCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: HSPACPRISGLRQLNFTVGLKPT*FPVFQK Trigger: CTTCTGGAAAACTGGAAACAAGGTGGGCTTCAAGCC...TACAGTGAAGTTAAGTTGCCTGAGACCTGAGATCCTAGGGCAGGCAGGGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS-3UTR CAA 90 bp | AAGGGTGTCTTGAAGGCATCCCAAGATTTGACAAAATCCACTTACCATAAGCTTACGCCAGGGACTCCTTaGCAGTGCGGATGCCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: KGVLKASQDLTKSTYHKLTPGTP*QCGCLR Trigger: CCGGAGGCATCCGCACTGCAAAGGAGTCCCTGGCGT...AAGCTTATGGTAAGTGGATTTTGTCAAATCTTGGGATGCCTTCAAGACACCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203507.2 |
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| CDS-3UTR CAA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATTCTCCTAGTTCCTCCTaGACCAGGGAGAGCCACGCC | + |
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Preference number: 5 (lower is better) Translates to: VDLLVTKTISTFPDLNPHSPSSS*TRESHA Trigger: GGCGTGGCTCTCCCTGGTCAAGGAGGAACTAGGAGA...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204356.2 ENSMUST00000204779.3 |
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| CDS-3UTR CAA 90 bp | GAGGACCTGGGTTTGGTTCCCAGAATCCACATGGTGGCTGACAATTCCAGTTCCAGAGGTCTGCCCGGATaGGATATTTGGCTTTATAAC | + |
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Preference number: 5 (lower is better) Translates to: EDLGLVPRIHMVADNSSSRGLPG*DIWLYN Trigger: GTTATAAAGCCAAATATCCAATCCGGGCAGACCTCT...GGAACTGGAATTGTCAGCCACCATGTGGATTCTGGGAACCAAACCCAGGTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| CDS CCA 90 bp | TTTCCAGAAGAAATCTCTAATGGCCCGCAGCATCACGATGGCGACTaGGAAGGTGGCGTTTACTGTTTCCTTTCCAGTAGAGGTCTTAAT | + |
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Preference number: 5 (lower is better) Translates to: FPEEISNGPQHHDGD*EGGVYCFLSSRGLN Trigger: ATTAAGACCTCTACTGGAAAGGAAACAGTAAACGCCACCTTCCCAGTCGCCATCGTGATGCTGCGGGCCATTAGAGATTTCTTCTGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000203693.3 ENSMUST00000204779.3 |
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| CDS-3UTR CAA 90 bp | GGGGAAAGTCAGTTAGCTGTTCCAAAATTACATAACCTTAGCAATTATGCAAAAACGCCAGGGACTCCTTaGCAGTGCGGATGCCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: GESQLAVPKLHNLSNYAKTPGTP*QCGCLR Trigger: CCGGAGGCATCCGCACTGCAAAGGAGTCCCTGGCGT...TTTTGCATAATTGCTAAGGTTATGTAATTTTGGAACAGCTAACTGACTTTCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204779.3 |
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| CDS-3UTR CAA 90 bp | AATAGAAAGGGTGTCTTGAAGGCATCCCAAGATTTGACAAAATCCACTTACCATTCTCCTAGTTCCTCCTaGACCAGGGAGAGCCACGCC | + |
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Preference number: 5 (lower is better) Translates to: NRKGVLKASQDLTKSTYHSPSSS*TRESHA Trigger: GGCGTGGCTCTCCCTGGTCAAGGAGGAACTAGGAGA...ATGGTAAGTGGATTTTGTCAAATCTTGGGATGCCTTCAAGACACCCTTTCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203507.2 |
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| CDS-3UTR CAA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATAGCCGCGTGATTCACTaGAACTTTGGAGATCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VDLLVTKTISTFPDLNPHSRVIH*NFGDPA Trigger: AGCTGGATCTCCAAAGTTCAAGTGAATCACGCGGCT...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000204356.2 |
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| CDS-3UTR CAA 90 bp | ACATTTTGCCCATGTCCTGAAAGTCTGAGTCAAGACCAAAGTAATGGATTATGGGTAGCTAGGATGGTTTaGAGATGGGCCTCGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: TFCPCPESLSQDQSNGLWVARMV*RWASPQ Trigger: CTGTGGCGAGGCCCATCTCAAAACCATCCTAGCTAC...CCATAATCCATTACTTTGGTCTTGACTCAGACTTTCAGGACATGGGCAAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| CDS-3UTR CAA 90 bp | GTAGACCTCCTGGTAACGAAGACCATTTCAACCTTTCCTGATCTGAATCCACATGGCTTGAAGCCCACCTaGTTTCCAGTTTTCCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: VDLLVTKTISTFPDLNPHGLKPT*FPVFQK Trigger: CTTCTGGAAAACTGGAAACAAGGTGGGCTTCAAGCC...ATGTGGATTCAGATCAGGAAAGGTTGAAATGGTCTTCGTTACCAGGAGGTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204779.3 |
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| CDS-3UTR CAA 90 bp | GGGGAAAGTCAGTTAGCTGTTCCAAAATTACATAACCTTAGCAATTATGCAAAATCTCCTAGTTCCTCCTaGACCAGGGAGAGCCACGCC | + |
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Preference number: 5 (lower is better) Translates to: GESQLAVPKLHNLSNYAKSPSSS*TRESHA Trigger: GGCGTGGCTCTCCCTGGTCAAGGAGGAACTAGGAGA...TTTTGCATAATTGCTAAGGTTATGTAATTTTGGAACAGCTAACTGACTTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000204356.2 ENSMUST00000204779.3 |
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| CDS-3UTR CAA 90 bp | ACATTTTGCCCATGTCCTGAAAGTCTGAGTCAAGACCAAAGTAATGGATTATGGAGCCGCGTGATTCACTaGAACTTTGGAGATCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: TFCPCPESLSQDQSNGLWSRVIH*NFGDPA Trigger: AGCTGGATCTCCAAAGTTCAAGTGAATCACGCGGCT...CCATAATCCATTACTTTGGTCTTGACTCAGACTTTCAGGACATGGGCAAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| CDS-3UTR CAA 90 bp | CAGAAAGCAGAGCAAAGCATATGCAGTTTGGTAGAAAGGGAAACTGTTAGGTGGAATAGAAAGGGTGTCTaGAAGGCATCCCAAGATTTG | + |
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Preference number: 5 (lower is better) Translates to: QKAEQSICSLVERETVRWNRKGV*KASQDL Trigger: CAAATCTTGGGATGCCTTCAAGACACCCTTTCTATT...CCACCTAACAGTTTCCCTTTCTACCAAACTGCATATGCTTTGCTCTGCTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203693.3 |
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| CDS-3UTR CAA 90 bp | CTTAACTTCACTGTACGTTCAGAATTTTCTGCAGTACAGGCTACTAGAAACATTAGCCGCGTGATTCACTaGAACTTTGGAGATCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LNFTVRSEFSAVQATRNISRVIH*NFGDPA Trigger: AGCTGGATCTCCAAAGTTCAAGTGAATCACGCGGCT...AATGTTTCTAGTAGCCTGTACTGCAGAAAATTCTGAACGTACAGTGAAGTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS CCA 90 bp | CATCCATATTTAAAGCTTTTAAGAGGTCTGCCCGGATTGGATATTTaGCTTTATAACAGAGTCGTTGAACGTTGGAAAACGTGTCATCGC | + |
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Preference number: 5 (lower is better) Translates to: HPYLKLLRGLPGLDI*LYNRVVERWKTCHR Trigger: GCGATGACACGTTTTCCAACGTTCAACGACTCTGTTATAAAGCCAAATATCCAATCCGGGCAGACCTCTTAAAAGCTTTAAATATGGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 |
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| CDS-3UTR CAA 90 bp | GGCAGAGTATCCTCTTGCTATAGCACCCATTCTCATTTTTATCACAGTTTTAAGAGAGGTCTGCCCGGATaGGATATTTGGCTTTATAAC | + |
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Preference number: 5 (lower is better) Translates to: GRVSSCYSTHSHFYHSFKRGLPG*DIWLYN Trigger: GTTATAAAGCCAAATATCCAATCCGGGCAGACCTCT...CTTAAAACTGTGATAAAAATGAGAATGGGTGCTATAGCAAGAGGATACTCTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087675.9 |
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| CDS GCA 72 bp | GGAGCCACGCAGCCTGCCATTCCTTCTTCACGCTTCTaGGAGCCTGGATCTGCTGGGCCCGCCTCAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: GATQPAIPSSRF*EPGSAGPASAQ Trigger: CTGTGCTGAGGCGGGCCCAGCAGATCCAGGCTCGCAGAAGCGTGAAGAAGGAATGGCAGGCTGCGTGGCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 |
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| CDS GCA 72 bp | CTCCTTGACCAGGGAGAGCCACGCCAGGGACTCCTTTaGAGTGCGGATGCCTCCGGCAGGCTTGAAGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: LLDQGEPRQGLL*SADASGRLEAH Trigger: GTGGGCTTCAAGCCTGCCGGAGGCATCCGCACTGCAAAGGAGTCCCTGGCGTGGCTCTCCCTGGTCAAGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000203507.2 ENSMUST00000204779.3 |
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| CDS GCA 72 bp | ACGCCAGGGACTCCTGCCATTCCTTCTTCACGCTTCTaGGAGCCTGGATCTGCTGGGCCCGCCTCAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: TPGTPAIPSSRF*EPGSAGPASAQ Trigger: CTGTGCTGAGGCGGGCCCAGCAGATCCAGGCTCGCAGAAGCGTGAAGAAGGAATGGCAGGAGTCCCTGGCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204356.2 |
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| CDS GCA 72 bp | TCCTCCTTGACCAGGGAGAGCCACGCCAGGGACTCCTaGCATTCCTTCTTCACGCTTCTGCGAGCCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: SSLTRESHARDS*HSFFTLLRAWI Trigger: GATCCAGGCTCGCAGAAGCGTGAAGAAGGAATGGCAGGAGTCCCTGGCGTGGCTCTCCCTGGTCAAGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204356.2 |
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| CDS CAA 90 bp | AGCCTGGATCTGCTGGGCCCGCCTCAGCACAGCCGCGTGATTCACTaGAACTTTGGAGATCCAGCTAAGATCGAGCTCTGTGCCCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: SLDLLGPPQHSRVIH*NFGDPAKIELCAPA Trigger: TGCCGGGGCACAGAGCTCGATCTTAGCTGGATCTCCAAAGTTCAAGTGAATCACGCGGCTGTGCTGAGGCGGGCCCAGCAGATCCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 ENSMUST00000204356.2 |
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| CDS CAA 90 bp | ATCCGGAAGAGGTCAGGCGTCAGCCACTCATCTCCTAGTTCCTCCTaGACCAGGGAGAGCCACGCCAGGGACTCCTTTGCAGTGCGGATG | + |
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Preference number: 6 (lower is better) Translates to: IRKRSGVSHSSPSSS*TRESHARDSFAVRM Trigger: CATCCGCACTGCAAAGGAGTCCCTGGCGTGGCTCTCCCTGGTCAAGGAGGAACTAGGAGATGAGTGGCTGACGCCTGACCTCTTCCGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000203507.2 ENSMUST00000204779.3 |
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| CDS CAA 90 bp | ATCCGGAAGAGGTCAGGCGTCAGCCACTCATCTCCTAGTTCCTCCTaGACCAGGGAGAGCCACGCCAGGGACTCCTGCCATTCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: IRKRSGVSHSSPSSS*TRESHARDSCHSFF Trigger: GAAGAAGGAATGGCAGGAGTCCCTGGCGTGGCTCTCCCTGGTCAAGGAGGAACTAGGAGATGAGTGGCTGACGCCTGACCTCTTCCGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204356.2 |
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| CDS CAA 72 bp | CTGCTGGGCCCGCCTCAGCACAGCCGCGTGATTCACTaGAACTTTGGAGATCCAGCTAAGATCGAGCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LLGPPQHSRVIH*NFGDPAKIELC Trigger: ACAGAGCTCGATCTTAGCTGGATCTCCAAAGTTCAAGTGAATCACGCGGCTGTGCTGAGGCGGGCCCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 ENSMUST00000204356.2 |
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| CDS CCA 72 bp | GGTAAATCTGTCTCTCGATGTCTGAGAGCAGAGAACTaGCCCCTATCCGGAAGAGGTCAGGCGTCAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: GKSVSRCLRAEN*PLSGRGQASAT Trigger: AGTGGCTGACGCCTGACCTCTTCCGGATAGGGGCCAGTTCTCTGCTCTCAGACATCGAGAGACAGATTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000203507.2 ENSMUST00000204356.2 ENSMUST00000204779.3 |
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| CDS TCA 72 bp | TCCAGTCACGTGATGGTAAATCTGTCTCTCGATGTCTaGGAGCAGAGAACTGGCCCCTATCCGGAAGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSHVMVNLSLDV*EQRTGPYPEEV Trigger: GACCTCTTCCGGATAGGGGCCAGTTCTCTGCTCTCAGACATCGAGAGACAGATTTACCATCACGTGACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087675.9 ENSMUST00000203216.3 ENSMUST00000203507.2 ENSMUST00000204356.2 ENSMUST00000204779.3 |
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| CDS TCA 72 bp | ACGGCCAGTCTGATCTCTTCCAATCGAGTCTTTAAATaGGTCTGTCCAGCTGGAAAGCCAGTGGCCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: TASLISSNRVFK*VCPAGKPVATE Trigger: CTCAGTGGCCACTGGCTTTCCAGCTGGACAGACTCATTTAAAGACTCGATTGGAAGAGATCAGACTGGCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 |
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| CDS TCA 72 bp | TACTGTTTCCTTTCCAGTAGAGGTCTTAATAAAATCTaGTCCGAGCTCTGTGCCCCGGCAGTGAGCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: YCFLSSRGLNKI*SELCAPAVSSH Trigger: ATGGCTGCTCACTGCCGGGGCACAGAGCTCGGATCAGATTTTATTAAGACCTCTACTGGAAAGGAAACAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203216.3 |
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| CDS CAA 72 bp | TGCCCGGATTGGATATTTGGCTTTATAACAGAGTCGTaGAACGTTGGAAAACGTGTCATCGCCAGAAAGCGT | + |
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Preference number: 6 (lower is better) Translates to: CPDWIFGFITES*NVGKRVIARKR Trigger: ACGCTTTCTGGCGATGACACGTTTTCCAACGTTCAACGACTCTGTTATAAAGCCAAATATCCAATCCGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 |
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| CDS CAA 72 bp | CGTCTAAAGTGTTTATTCTCGGCTCCAACGCTTGCTTaGAAAGCCCAAAGTGGAATCAAGTTCACTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RLKCLFSAPTLA*KAQSGIKFTVS Trigger: AGAGACAGTGAACTTGATTCCACTTTGGGCTTTCAAAGCAAGCGTTGGAGCCGAGAATAAACACTTTAGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204723.2 |
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| CDS GCA 72 bp | AAGACGTCTAAAGTGTTTATTCTCGGCTCCAACGCTTaGTTTGAAAGCCCAAAGTGGAATCAAGTTCACTGT | + |
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Preference number: 6 (lower is better) Translates to: KTSKVFILGSNA*FESPKWNQVHC Trigger: ACAGTGAACTTGATTCCACTTTGGGCTTTCAAAGCAAGCGTTGGAGCCGAGAATAAACACTTTAGACGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204723.2 |
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| CDS CAA 90 bp | TGCCTTTGTCATCCATATTTAAAGCTTTTAAGAGGTCTGCCCGGATaGGATATTTGGCTTTATAACAGAGTCGTTGAACGTTGGAAAACG | + |
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Preference number: 6 (lower is better) Translates to: CLCHPYLKLLRGLPG*DIWLYNRVVERWKT Trigger: CGTTTTCCAACGTTCAACGACTCTGTTATAAAGCCAAATATCCAATCCGGGCAGACCTCTTAAAAGCTTTAAATATGGATGACAAAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 |
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| CDS CCA 72 bp | TTAAAGCTTTTAAGAGGTCTGCCCGGATTGGATATTTaGCTTTATAACAGAGTCGTTGAACGTTGGAAAACG | + |
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Preference number: 6 (lower is better) Translates to: LKLLRGLPGLDI*LYNRVVERWKT Trigger: CGTTTTCCAACGTTCAACGACTCTGTTATAAAGCCAAATATCCAATCCGGGCAGACCTCTTAAAAGCTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 |
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| CDS CAA 72 bp | CATCCATATTTAAAGCTTTTAAGAGGTCTGCCCGGATaGGATATTTGGCTTTATAACAGAGTCGTTGAACGT | + |
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Preference number: 6 (lower is better) Translates to: HPYLKLLRGLPG*DIWLYNRVVER Trigger: ACGTTCAACGACTCTGTTATAAAGCCAAATATCCAATCCGGGCAGACCTCTTAAAAGCTTTAAATATGGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087675.9 ENSMUST00000203693.3 |
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