RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DEPDC5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037426

Ensembl transcript IDs: ENSMUST00000049780.13, ENSMUST00000087897.11, ENSMUST00000118698.8, ENSMUST00000119705.8, ENSMUST00000120902.8, ENSMUST00000124780.8, ENSMUST00000125574.8, ENSMUST00000130461.2, ENSMUST00000137169.8, ENSMUST00000149350.8, ENSMUST00000195980.5, ENSMUST00000201836.2, ENSMUST00000238200.2

Found 1016 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCCAGGGAGCTGTCATCAGAAGCCTGGCTCCTCACTTCCTCAGTaGGCAGTGCACGGCTTGGCAGGGAAGGGCTGGATGAGACATCAC +
Preference number: 1 (lower is better)
Translates to: CPGSCHQKPGSSLPQ*AVHGLAGKGWMRHH
Trigger: GTGATGTCTCATCCAGCCCTTCCCTGCCAAGCCGTGCACTGCCCACTGAGGAAGTGAGGAGCCAGGCTTCTGATGACAGCTCCCTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR CCA 90 bp CTGTTCTCTCACAGACCTGCAGGTGGCGAGGCGCTGAGCCCGGGATaGGCCAGGCAGCCTGAACACTTGAGCATCGTAGGCATCATAATC +
Preference number: 1 (lower is better)
Translates to: LFSHRPAGGEALSPG*ARQPEHLSIVGIII
Trigger: GATTATGATGCCTACGATGCTCAAGTGTTCAGGCTGCCTGGCCCATCCCGGGCTCAGCGCCTCGCCACCTGCAGGTCTGTGAGAGAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
3UTR TCA 90 bp AGGACCACACGAGATCACACGGTCTGGCGTGGCCAACAGCTGCTGTaGCCACAGAGGAGGCTGGCATGGAACCCTGAACATACCCATCTG +
Preference number: 1 (lower is better)
Translates to: RTTRDHTVWRGQQLL*PQRRLAWNPEHTHL
Trigger: CAGATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTGGTCACAGCAGCTGTTGGCCACGCCAGACCGTGTGATCTCGTGTGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR TCA 90 bp TTGGTTGGTGGAGCTGGTAGAGTTCCGTCGCCGCCGCTGCTGCCCTaGAAACTTGCGTTTGGAGTACGGCAGCTGAAGGAACACCGTTCC +
Preference number: 1 (lower is better)
Translates to: LVGGAGRVPSPPLLP*KLAFGVRQLKEHRS
Trigger: GGAACGGTGTTCCTTCAGCTGCCGTACTCCAAACGCAAGTTTTCAGGGCAGCAGCGGCGGCGACGGAACTCTACCAGCTCCACCAACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR TCA 90 bp ACCTGCAGGTGGCGAGGCGCTGAGCCCGGGATGGGCCAGGCAGCCTaGACACTTGAGCATCGTAGGCATCATAATCTACTTGGATGGGAA +
Preference number: 1 (lower is better)
Translates to: TCRWRGAEPGMGQAA*TLEHRRHHNLLGWE
Trigger: TTCCCATCCAAGTAGATTATGATGCCTACGATGCTCAAGTGTTCAGGCTGCCTGGCCCATCCCGGGCTCAGCGCCTCGCCACCTGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
3UTR GCA 90 bp CTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTaGTTCAGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCA +
Preference number: 1 (lower is better)
Translates to: LPDTDSLPRTICASP*FRDRIGKIWLAVAA
Trigger: TGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR GCA 90 bp ATAACAGGACCACACGAGATCACACGGTCTGGCGTGGCCAACAGCTaGTGTGACCACAGAGGAGGCTGGCATGGAACCCTGAACATACCC +
Preference number: 1 (lower is better)
Translates to: ITGPHEITRSGVANS*CDHRGGWHGTLNIP
Trigger: GGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTGGTCACAGCAGCTGTTGGCCACGCCAGACCGTGTGATCTCGTGTGGTCCTGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 90 bp ACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTaGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATCT +
Preference number: 1 (lower is better)
Translates to: TPTDNLCLPLLQGQD*QDLVGGSGSSCFQS
Trigger: AGATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR TCA 90 bp GAGGGTGTGGAGTCCCCTGGAACTCCAGGTATGGATGGCTGTGAGTaGCCTCACGCTGGCACTGAACTCAGGTGCTCTGTAAGATCAGTC +
Preference number: 1 (lower is better)
Translates to: EGVESPGTPGMDGCE*PHAGTELRCSVRSV
Trigger: GACTGATCTTACAGAGCACCTGAGTTCAGTGCCAGCGTGAGGTCACTCACAGCCATCCATACCTGGAGTTCCAGGGGACTCCACACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 90 bp TCGGTCTTTGCCTTCCCTGAGCAGTCTAGAGCGAAAAGCACTCACTaGACGTGTAGGGAATGCCGTGATGTCTGCTTCCCTGAGCTGGCC +
Preference number: 1 (lower is better)
Translates to: SVFAFPEQSRAKSTH*TCRECRDVCFPELA
Trigger: GGCCAGCTCAGGGAAGCAGACATCACGGCATTCCCTACACGTCCAGTGAGTGCTTTTCGCTCTAGACTGCTCAGGGAAGGCAAAGACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 90 bp ACACGGTCTGGCGTGGCCAACAGCTGCTGTGACCACAGAGGAGGCTaGCATGGAACCCTGAACATACCCATCTGGGAAAACGAGAACTTG +
Preference number: 1 (lower is better)
Translates to: TRSGVANSCCDHRGG*HGTLNIPIWENENL
Trigger: CAAGTTCTCGTTTTCCCAGATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTGGTCACAGCAGCTGTTGGCCACGCCAGACCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 90 bp TCCTCACTTCCTCAGTGGGCAGTGCACGGCTTGGCAGGGAAGGGCTaGATGAGACATCACAGGAGCTTGCACTTTTGCGACTGTGATTCT +
Preference number: 1 (lower is better)
Translates to: SSLPQWAVHGLAGKG*MRHHRSLHFCDCDS
Trigger: AGAATCACAGTCGCAAAAGTGCAAGCTCCTGTGATGTCTCATCCAGCCCTTCCCTGCCAAGCCGTGCACTGCCCACTGAGGAAGTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR TCA 90 bp CGCCGCCGCTGCTGCCCTGAAAACTTGCGTTTGGAGTACGGCAGCTaGAGGAACACCGTTCCTGTGACATGGATATACTGTGGCTTATTC +
Preference number: 1 (lower is better)
Translates to: RRRCCPENLRLEYGS*RNTVPVTWIYCGLF
Trigger: GAATAAGCCACAGTATATCCATGTCACAGGAACGGTGTTCCTTCAGCTGCCGTACTCCAAACGCAAGTTTTCAGGGCAGCAGCGGCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR CCA 90 bp ACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTaGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATCTTTCTCTTCAC +
Preference number: 1 (lower is better)
Translates to: TICASPCFRDRIGKI*LAVAAAAASNLSLH
Trigger: GTGAAGAGAAAGATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR GCA 90 bp GTAGCGGCAGCAGCTGCTTCCAATCTTTCTCTTCACTCACACTTGTaGAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATAGGAGC +
Preference number: 1 (lower is better)
Translates to: VAAAAASNLSLHSHL*RGQISAVAPLTDRS
Trigger: GCTCCTATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAGCTGCTGCCGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR GCA 90 bp ACATCAAGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTaGTCTCCCAGAGGTCCTGAGTTCAAATCCCAGCAAGCACATGGT +
Preference number: 1 (lower is better)
Translates to: TSRGWRDGSEVKSTD*SPRGPEFKSQQAHG
Trigger: ACCATGTGCTTGCTGGGATTTGAACTCAGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACCTCTGAGCCATCTCTCCAGCCCCTTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR GCA 90 bp TCCAAAACTGGGACCAGCAAGAAGCCACAGGAGGTAGCTTTTCGATaGCAACCTTGGACCATCTCAAACAGCACTGTGGCAGTCACTGCC +
Preference number: 1 (lower is better)
Translates to: SKTGTSKKPQEVAFR*QPWTISNSTVAVTA
Trigger: GGCAGTGACTGCCACAGTGCTGTTTGAGATGGTCCAAGGTTGGCATCGAAAAGCTACCTCCTGTGGCTTCTTGCTGGTCCCAGTTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR CCA 90 bp TCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATaGAGCACTGGCATGCATCTTCTCCAGGCAGTTTGTCCAGAACGT +
Preference number: 1 (lower is better)
Translates to: SSIPTASLKRSSLAS*STGMHLLQAVCPER
Trigger: ACGTTCTGGACAAACTGCCTGGAGAAGATGCATGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
3UTR CCA 90 bp CTCACTGGACGTGTAGGGAATGCCGTGATGTCTGCTTCCCTGAGCTaGCCCATCCACTTAACGAGGCATATTTCTGACATGACAAGCCTA +
Preference number: 1 (lower is better)
Translates to: LTGRVGNAVMSASLS*PIHLTRHISDMTSL
Trigger: TAGGCTTGTCATGTCAGAAATATGCCTCGTTAAGTGGATGGGCCAGCTCAGGGAAGCAGACATCACGGCATTCCCTACACGTCCAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR TCA 90 bp CATCACCCAGTCGAGAATCCCTCGGAACACTCCGGTTATGTAGCTTaGATAATGGCACAGCATGTAGTGGCTGCTCTCCCATGCACACTA +
Preference number: 1 (lower is better)
Translates to: HHPVENPSEHSGYVA*IMAQHVVAALPCTL
Trigger: TAGTGTGCATGGGAGAGCAGCCACTACATGCTGTGCCATTATTCAAGCTACATAACCGGAGTGTTCCGAGGGATTCTCGACTGGGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR GCA 90 bp AGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCTTTATTAGATTCTaGTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATT +
Preference number: 1 (lower is better)
Translates to: REGGREGGREGFIRF*YVHICTAGVSQWYI
Trigger: AATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCTAATAAAGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR GCA 90 bp AAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTaGGGTTACAGGTACACTCCACAAAGTCCAGCTGTACCTGCCTCA +
Preference number: 1 (lower is better)
Translates to: KSQQPSSLSFSLLKC*GYRYTPQSPAVPAS
Trigger: TGAGGCAGGTACAGCTGGACTTTGTGGAGTGTACCTGTAACCGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR GCA 90 bp TCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTaGTGCGGTTACAGGTACACTCCACAAAGTCCAGCTGTACCTGCC +
Preference number: 1 (lower is better)
Translates to: SKSQQPSSLSFSLLK*CGYRYTPQSPAVPA
Trigger: GGCAGGTACAGCTGGACTTTGTGGAGTGTACCTGTAACCGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR GCA 90 bp ACTGTCTGCTCAGTAGTCCTGTCCTGTCCAGAAGATCCTTGTTCTTaGCCAAGGACTTTGAAAAAGAAACCTATCAAGCCAGCTCAGAGC +
Preference number: 1 (lower is better)
Translates to: TVCSVVLSCPEDPCS*PRTLKKKPIKPAQS
Trigger: GCTCTGAGCTGGCTTGATAGGTTTCTTTTTCAAAGTCCTTGGGCAAGAACAAGGATCTTCTGGACAGGACAGGACTACTGAGCAGACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 90 bp GCCAATGGTACATTATGCCACAGATTTACCTCATACACACACTCTTaGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTGGT +
Preference number: 1 (lower is better)
Translates to: ANGTLCHRFTSYTHS*AESRRFCSEYPTAG
Trigger: ACCAGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR TCA 90 bp GTGCTTATTTGCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGAGTaGCCTCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTC +
Preference number: 1 (lower is better)
Translates to: VLICLGQCLTVCVLE*PQNHSNLLPSPLVF
Trigger: GAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGAGGTCACTCCAGGACACACACAGTAAGACACTGTCCCAAGCAAATAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 90 bp TGTGACCACAGAGGAGGCTGGCATGGAACCCTGAACATACCCATCTaGGAAAACGAGAACTTGATTTACTCTCTTTTCAGTACTAAGCTC +
Preference number: 1 (lower is better)
Translates to: CDHRGGWHGTLNIPI*ENENLIYSLFSTKL
Trigger: GAGCTTAGTACTGAAAAGAGAGTAAATCAAGTTCTCGTTTTCCCAGATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR TCA 90 bp ACTAGGCAAGACAATACTTGGTTTTACTTTTGTAGTGTTGTGAATTaGGTCCAGAGCCTGGTGCCTGCTATGCTGGCTCTGATCTGCATC +
Preference number: 1 (lower is better)
Translates to: TRQDNTWFYFCSVVN*VQSLVPAMLALICI
Trigger: GATGCAGATCAGAGCCAGCATAGCAGGCACCAGGCTCTGGACTCAATTCACAACACTACAAAAGTAAAACCAAGTATTGTCTTGCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR GCA 90 bp ACACTCCGGTTATGTAGCTTGAATAATGGCACAGCATGTAGTGGCTaGTCTCCCATGCACACTAAGTCCACACCAATTCCATTATCAATC +
Preference number: 1 (lower is better)
Translates to: TLRLCSLNNGTACSG*SPMHTKSTPIPLSI
Trigger: GATTGATAATGGAATTGGTGTGGACTTAGTGTGCATGGGAGAGCAGCCACTACATGCTGTGCCATTATTCAAGCTACATAACCGGAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR CCA 90 bp GTACGGCAGCTGAAGGAACACCGTTCCTGTGACATGGATATACTGTaGCTTATTCTCAGCAGGGAAGTTAAAAGCGGAGACAGAATATTT +
Preference number: 1 (lower is better)
Translates to: VRQLKEHRSCDMDIL*LILSREVKSGDRIF
Trigger: AAATATTCTGTCTCCGCTTTTAACTTCCCTGCTGAGAATAAGCCACAGTATATCCATGTCACAGGAACGGTGTTCCTTCAGCTGCCGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR TCA 90 bp TGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTaGATGGTTAACAGTGAAGAACAACTACATAGCAAACTGCAAAGC +
Preference number: 1 (lower is better)
Translates to: CVDGASGTSNSTPVE*MVNSEEQLHSKLQS
Trigger: GCTTTGCAGTTTGCTATGTAGTTGTTCTTCACTGTTAACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
3UTR GCA 90 bp TCTTGCACAAATCCAAACCTGTGTGCAATGGCTTCCTGGAAAAGATaGATTCGATCCCAATATGTCTCTGGTTCAAAGCTATCGAACAGG +
Preference number: 1 (lower is better)
Translates to: SCTNPNLCAMASWKR*IRSQYVSGSKLSNR
Trigger: CCTGTTCGATAGCTTTGAACCAGAGACATATTGGGATCGAATGCATCTTTTCCAGGAAGCCATTGCACACAGGTTTGGATTTGTGCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR CCA 90 bp TATGCTGGCTCTGATCTGCATCTCCAGCACCATACTGAAGGTTTTTaGAGTCAGGTAGTCAAGAGAATTCTAAGTGGCAAGTCTAAATGG +
Preference number: 1 (lower is better)
Translates to: YAGSDLHLQHHTEGF*SQVVKRILSGKSKW
Trigger: CCATTTAGACTTGCCACTTAGAATTCTCTTGACTACCTGACTCCAAAAACCTTCAGTATGGTGCTGGAGATGCAGATCAGAGCCAGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 90 bp TTAAATCACCAATGGCAAACACCTTTATTTATTGAGCTTGGAATCTaGAATGCTAGAGACTGCAGGAACTGGAGCTCAAGGCCAGGAGCA +
Preference number: 1 (lower is better)
Translates to: LNHQWQTPLFIELGI*NARDCRNWSSRPGA
Trigger: TGCTCCTGGCCTTGAGCTCCAGTTCCTGCAGTCTCTAGCATTCCAGATTCCAAGCTCAATAAATAAAGGTGTTTGCCATTGGTGATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR TCA 90 bp GCCCGATGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTCTGCTGCCCAGAGCCTaGCCGGAAGGCCAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: ARCKRRSEEGVESPGTPGLLPRA*PEGQLQ
Trigger: CTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAG...ACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCATCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR GCA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACACAGCCTGACACCTGCTaGCCAGAGCCTGACCGGAAG +
Preference number: 2 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTQPDTC*PEPDRK
Trigger: CTTCCGGTCAGGCTCTGGGCAGCAGGTGTCAGGCTG...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR CAA 90 bp CTATCGAACAGGTGCTCGCTGCCCTCCTTGAGCAAGCAGCTGAGGTaGAGCGGGATGAAGAGCTGGGCCCTCAGGGGATCACCATACAGG +
Preference number: 2 (lower is better)
Translates to: LSNRCSLPSLSKQLR*SGMKSWALRGSPYR
Trigger: CCTGTATGGTGATCCCCTGAGGGCCCAGCTCTTCATCCCGCTCAACCTCAGCTGCTTGCTCAAGGAGGGCAGCGAGCACCTGTTCGATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR CAA 90 bp GTTGTAGGCCCAGTTGTAGCCAACCCGCTCCTCACAGAACATGTTTaGGTTGGTGGAGCTGGTAGAGTTCCGTCGCCGCCGCTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: VVGPVVANPLLTEHV*VGGAGRVPSPPLLP
Trigger: GGGCAGCAGCGGCGGCGACGGAACTCTACCAGCTCCACCAACCAAAACATGTTCTGTGAGGAGCGGGTTGGCTACAACTGGGCCTACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR CAA 90 bp GGTGGCGAGGCGCTGAGCCCGGGATGGGCCAGGCAGCCTGAACACTaGAGCATCGTAGGCATCATAATCTACTTGGATGGGAAGGGTGTT +
Preference number: 2 (lower is better)
Translates to: GGEALSPGWARQPEH*SIVGIIIYLDGKGV
Trigger: AACACCCTTCCCATCCAAGTAGATTATGATGCCTACGATGCTCAAGTGTTCAGGCTGCCTGGCCCATCCCGGGCTCAGCGCCTCGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
3UTR-3UTR GCA 90 bp TGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCTCACGGCTGGTTCAAGGGAATaGACAACTCCCAAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: WSSGRTQVPNPAPKWWLTAGSRE*TTPKAA
Trigger: AGCTGCCTTGGGAGTTGTGCATTCCCTTGAACCAGC...CGTGAGCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR TCA 90 bp AACAGCTGCTGTGACCACAGAGGAGGCTGGCATGGAACCCTGAACATACCCATCCCACCTGAGGTGACCTaGCTGGCCTGGCTACCAACA +
Preference number: 2 (lower is better)
Translates to: NSCCDHRGGWHGTLNIPIPPEVT*LAWLPT
Trigger: TGTTGGTAGCCAGGCCAGTCAGGTCACCTCAGGTGG...GATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTGGTCACAGCAGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR GCA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGCCCACGGACAATCTGTaGCTCCCCCTGCTTCAGGGA +
Preference number: 2 (lower is better)
Translates to: RTICASPCFRDRIGKIWLPTDNL*LPLLQG
Trigger: TCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGG...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR GCA 90 bp CACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTCGTCGCCGCCGCTGCTaGCCTGAAAACTTGCGTTTG +
Preference number: 2 (lower is better)
Translates to: HGQSVPPPASGTGLARFGRRRRC*PENLRL
Trigger: CAAACGCAAGTTTTCAGGGCAGCAGCGGCGGCGACG...ACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR-3UTR CCA 90 bp CTCCTGTTCTCTCACAGACCTGCAGGTGGCGAGGCGCTGAGCCCGGGATGGGCCGTTTTCAGATTCCTTTaGAGTCCCGAGAGATGTATC +
Preference number: 2 (lower is better)
Translates to: LLFSHRPAGGEALSPGWAVFRFL*SPERCI
Trigger: GATACATCTCTCGGGACTCCAAAGGAATCTGAAAAC...GGCCCATCCCGGGCTCAGCGCCTCGCCACCTGCAGGTCTGTGAGAGAACAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
3UTR-3UTR TCA 90 bp GCCGCCGCTGCTGCCCTGAAAACTTGCGTTTGGAGTACGGCAGCTGAAGGAACAAGTTTGTCCAGAACGTaGCCAGTCGGTTGTCACGGT +
Preference number: 2 (lower is better)
Translates to: AAAAALKTCVWSTAAEGTSLSRT*PVGCHG
Trigger: ACCGTGACAACCGACTGGTCACGTTCTGGACAAACT...TGTTCCTTCAGCTGCCGTACTCCAAACGCAAGTTTTCAGGGCAGCAGCGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR-3UTR TCA 90 bp ACTGTACTGTACTGTCTGCTCAGTAGTCCTGTCCTGTCCAGAAGATCCTTGTTCCTGCTGCCCAGAGCCTaGCCGGAAGGCCAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: TVLYCLLSSPVLSRRSLFLLPRA*PEGQLQ
Trigger: CTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAG...GAACAAGGATCTTCTGGACAGGACAGGACTACTGAGCAGACAGTACAGTACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR GCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTCAGCCTGACACCTGCTaGCCAGAGCCTGACCGGAAG +
Preference number: 2 (lower is better)
Translates to: YTHSWAESRRFCSEYPTAQPDTC*PEPDRK
Trigger: CTTCCGGTCAGGCTCTGGGCAGCAGGTGTCAGGCTG...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR GCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACCAGCCTGACACCTGCTaGCCAGAGCCTGACCGGAAG +
Preference number: 2 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHQPDTC*PEPDRK
Trigger: CTTCCGGTCAGGCTCTGGGCAGCAGGTGTCAGGCTG...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR CCA 90 bp GGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTAGCAGCCTGGCTTCATaGAGCACTGGCATGCATCTT +
Preference number: 2 (lower is better)
Translates to: GWRDGSEVKSTDCSPRGPSSLAS*STGMHL
Trigger: AAGATGCATGCCAGTGCTCCATGAAGCCAGGCTGCT...AGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACCTCTGAGCCATCTCTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
3UTR-3UTR CCA 90 bp TGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCTCACGGCAGAAGATTTGAGCTaGTTCAAGGGAATGCACAAC +
Preference number: 2 (lower is better)
Translates to: WSSGRTQVPNPAPKWWLTAEDLS*FKGMHN
Trigger: GTTGTGCATTCCCTTGAACCAGCTCAAATCTTCTGC...CGTGAGCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CAA 90 bp GCGGTAGCGGCAGCAGCTGCTTCCAATCTTTCTCTTCACTCACACTaGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATAGG +
Preference number: 2 (lower is better)
Translates to: AVAAAAASNLSLHSH*CRGQISAVAPLTDR
Trigger: CCTATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAGCTGCTGCCGCTACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR CAA 90 bp ATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTaGGCGGTAGCGGCAGCAGCTGCTTCCAATCTTTCTCTTCACTCA +
Preference number: 2 (lower is better)
Translates to: ICASPCFRDRIGKIW*AVAAAAASNLSLHS
Trigger: TGAGTGAAGAGAAAGATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR CAA 90 bp GACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTaGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATCTTTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: DNLCLPLLQGQDWQD*VGGSGSSCFQSFSS
Trigger: TGAAGAGAAAGATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR TCA 90 bp CACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTAGTTTGTCCAGAACGTaGCCAGTCGGTTGTCACGGT +
Preference number: 2 (lower is better)
Translates to: HGQSVPPPASGTGLARFGSLSRT*PVGCHG
Trigger: ACCGTGACAACCGACTGGTCACGTTCTGGACAAACT...ACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
3UTR-3UTR GCA 90 bp CCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCAGCCTGACACCTGCTaGCCAGAGCCTGACCGGAAG +
Preference number: 2 (lower is better)
Translates to: PQIYLIHTLLGRKQEVLFQPDTC*PEPDRK
Trigger: CTTCCGGTCAGGCTCTGGGCAGCAGGTGTCAGGCTG...GAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR CCA 90 bp GCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCAAGGACCCTCCAAAACTaGGACCAGCAAGAAGCCACA +
Preference number: 2 (lower is better)
Translates to: APAYPQPLLREAAWLHGARTLQN*DQQEAT
Trigger: TGTGGCTTCTTGCTGGTCCCAGTTTTGGAGGGTCCT...TGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR CAA 90 bp GCATGCATCTTCTCCAGGCAGTTTGTCCAGAACGTGACCAGTCGGTaGTCACGGTTGATGCAGAAATCCGTGAAGTCCTTCAGCAGCCGA +
Preference number: 2 (lower is better)
Translates to: ACIFSRQFVQNVTSR*SRLMQKSVKSFSSR
Trigger: TCGGCTGCTGAAGGACTTCACGGATTTCTGCATCAACCGTGACAACCGACTGGTCACGTTCTGGACAAACTGCCTGGAGAAGATGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
3UTR-3UTR GCA 90 bp AGGCCAGCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATCATGGAGCACTGGCATaGATCTTCTCCAGGCAGTTT +
Preference number: 2 (lower is better)
Translates to: RPAPAYPQPLLREAAWLHHGALA*IFSRQF
Trigger: AAACTGCCTGGAGAAGATGCATGCCAGTGCTCCATG...ATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
3UTR-3UTR GCA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCCACGGACAATCTGTaGCTCCCCCTGCTTCAGGGA +
Preference number: 2 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVPTDNL*LPLLQG
Trigger: TCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGG...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR CCA 90 bp CACAGAGGAGGCTGGCATGGAACCCTGAACATACCCATCTGGGAAAACGAGAACGGTACATCAAGGGGCTaGAGAGATGGCTCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: HRGGWHGTLNIPIWENENGTSRG*RDGSEV
Trigger: AACCTCTGAGCCATCTCTCCAGCCCCTTGATGTACC...GTTCTCGTTTTCCCAGATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR CCA 90 bp TGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCTCACGCATACTGAAGGTTTTTaGAGTCAGGTAGTCAAGAGA +
Preference number: 2 (lower is better)
Translates to: WSSGRTQVPNPAPKWWLTHTEGF*SQVVKR
Trigger: TCTCTTGACTACCTGACTCCAAAAACCTTCAGTATG...CGTGAGCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CAA 90 bp TTCTCCAGGCAGTTTGTCCAGAACGTGACCAGTCGGTTGTCACGGTaGATGCAGAAATCCGTGAAGTCCTTCAGCAGCCGATCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: FSRQFVQNVTSRLSR*MQKSVKSFSSRSAN
Trigger: GTTTGCTGATCGGCTGCTGAAGGACTTCACGGATTTCTGCATCAACCGTGACAACCGACTGGTCACGTTCTGGACAAACTGCCTGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
3UTR-3UTR GCA 90 bp AACAGCTGCTGTGACCACAGAGGAGGCTGGCATGGAACCCTGAACATACCCATCAGTTTCCCAGGAGAGTaGAGTAGGATGAACCAGAGA +
Preference number: 2 (lower is better)
Translates to: NSCCDHRGGWHGTLNIPISFPGE*SRMNQR
Trigger: TCTCTGGTTCATCCTACTGCACTCTCCTGGGAAACT...GATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTGGTCACAGCAGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR GCA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCCATGGTAGTAACAGCTaGACCATTCCAGCCGGTCCG +
Preference number: 2 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPHGSNS*TIPAGP
Trigger: CGGACCGGCTGGAATGGTGCAGCTGTTACTACCATG...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR-3UTR CCA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAACACATATGTACAGCTaGTGTGAGCCAATGGTACAT +
Preference number: 2 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTTHMYS*CEPMVH
Trigger: ATGTACCATTGGCTCACACCAGCTGTACATATGTGT...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR CCA 90 bp TGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTATGGATGGTACATCAAGGGGCTaGAGAGATGGCTCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: CKRRSEEGVESPGTPGMDGTSRG*RDGSEV
Trigger: AACCTCTGAGCCATCTCTCCAGCCCCTTGATGTACC...ATCCATACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CAA 90 bp TCATCACCCAGTCGAGAATCCCTCGGAACACTCCGGTTATGTAGCTaGAATAATGGCACAGCATGTAGTGGCTGCTCTCCCATGCACACT +
Preference number: 2 (lower is better)
Translates to: SSPSRESLGTLRLCS*NNGTACSGCSPMHT
Trigger: AGTGTGCATGGGAGAGCAGCCACTACATGCTGTGCCATTATTCAAGCTACATAACCGGAGTGTTCCGAGGGATTCTCGACTGGGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR-3UTR TCA 90 bp AACAGCTGCTGTGACCACAGAGGAGGCTGGCATGGAACCCTGAACATACCCATCTCAAATGCTCTTAACTaGGTCATCTTTCCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: NSCCDHRGGWHGTLNIPISNALN*VIFPAP
Trigger: TGGGGCTGGAAAGATGACTCAGTTAAGAGCATTTGA...GATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTGGTCACAGCAGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR GCA 90 bp GCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGAGTGACCTCAAAATCACAGCAGCTGGTTCAAGGGAATaGACAACTCCCAAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: AWDSVLLCVSWSDLKITAAGSRE*TTPKAA
Trigger: AGCTGCCTTGGGAGTTGTGCATTCCCTTGAACCAGC...TGCTGTGATTTTGAGGTCACTCCAGGACACACACAGTAAGACACTGTCCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR CCA 90 bp TGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTATGGATATCCCAGCAAGCACATaGTGGCTCAGAACCATCTGT +
Preference number: 2 (lower is better)
Translates to: CKRRSEEGVESPGTPGMDIPAST*WLRTIC
Trigger: ACAGATGGTTCTGAGCCACCATGTGCTTGCTGGGAT...ATCCATACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CAA 90 bp GCCAGGCAGCCTGAACACTTGAGCATCGTAGGCATCATAATCTACTaGGATGGGAAGGGTGTTTTCAGATTCCTTTGGAGTCCCGAGAGA +
Preference number: 2 (lower is better)
Translates to: ARQPEHLSIVGIIIY*DGKGVFRFLWSPER
Trigger: TCTCTCGGGACTCCAAAGGAATCTGAAAACACCCTTCCCATCCAAGTAGATTATGATGCCTACGATGCTCAAGTGTTCAGGCTGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
3UTR-3UTR CCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTTAAGAGAAGCAGCCTaGCTTCATGGAGCACTGGCA +
Preference number: 2 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHLREAA*LHGALA
Trigger: TGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAA...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
3UTR-3UTR CCA 90 bp AGGCCAGCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATACACATATGTACAGCTaGTGTGAGCCAATGGTACAT +
Preference number: 2 (lower is better)
Translates to: RPAPAYPQPLLREAAWLHTHMYS*CEPMVH
Trigger: ATGTACCATTGGCTCACACCAGCTGTACATATGTGT...ATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
3UTR-3UTR CCA 90 bp TCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTGCGGTTCTGCTTCCCTGAGCTaGCCCATCCACTTAACGAGG +
Preference number: 2 (lower is better)
Translates to: SKSQQPSSLSFSLLKCCGSASLS*PIHLTR
Trigger: CCTCGTTAAGTGGATGGGCCAGCTCAGGGAAGCAGA...ACCGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR TCA 90 bp CACTTTTGCGACTGTGATTCTCCTGTTCTCTCACAGACCTGCAGGTGGCGAGGCGTTTTATCCGTGGAGTaGAACTGTTACAAAAGAGCT +
Preference number: 2 (lower is better)
Translates to: HFCDCDSPVLSQTCRWRGVLSVE*NCYKRA
Trigger: AGCTCTTTTGTAACAGTTTCACTCCACGGATAAAAC...GCCTCGCCACCTGCAGGTCTGTGAGAGAACAGGAGAATCACAGTCGCAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
3UTR-3UTR GCA 90 bp AAACAAGGAAGGCTGGACCTGGAGTTGTACATAGGGCCCAGGAGAGGTAAAGAACTGTACTGTACTGTCTaGTCAGTAGTCCTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: KQGRLDLELYIGPRRGKELYCTV*SVVLSC
Trigger: ACAGGACAGGACTACTGAGCAGACAGTACAGTACAG...TTCTTTACCTCTCCTGGGCCCTATGTACAACTCCAGGTCCAGCCTTCCTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR GCA 90 bp GCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGAGTGACCTCAAAATCACAGCACACATGTGTGCCCGATaGAAAAGAAGGTCAGAAGAG +
Preference number: 2 (lower is better)
Translates to: AWDSVLLCVSWSDLKITAHMCAR*KRRSEE
Trigger: CTCTTCTGACCTTCTTTTGCATCGGGCACACATGTG...TGCTGTGATTTTGAGGTCACTCCAGGACACACACAGTAAGACACTGTCCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR CCA 90 bp GGTAAAGAAGGTAAGGTACATCAAGGGGCTGGAGAGATGGCTCAGAGGTTAAGATTAAGAGAAGCAGCCTaGCTTCATGGAGCACTGGCA +
Preference number: 2 (lower is better)
Translates to: GKEGKVHQGAGEMAQRLRLREAA*LHGALA
Trigger: TGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAA...TCTTAACCTCTGAGCCATCTCTCCAGCCCCTTGATGTACCTTACCTTCTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
3UTR-3UTR CCA 90 bp GCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGAGTGACCTCAAAATCACAGCATCCGATGCCCTGTTCTaGTGTCTGAAGATAGCTACA +
Preference number: 2 (lower is better)
Translates to: AWDSVLLCVSWSDLKITASDALF*CLKIAT
Trigger: TGTAGCTATCTTCAGACACCAGAACAGGGCATCGGA...TGCTGTGATTTTGAGGTCACTCCAGGACACACACAGTAAGACACTGTCCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CAA 90 bp AGCCAATGGTACATTATGCCACAGATTTACCTCATACACACACTCTaGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTGG +
Preference number: 2 (lower is better)
Translates to: SQWYIMPQIYLIHTL*GRKQEVLFRISHCW
Trigger: CCAGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR CAA 90 bp ATGCACACTAAGTCCACACCAATTCCATTATCAATCATCCGCTGCTaGGTCAAGATCATGAGTAGGCGGTCCACTTCAAAGACACCCACC +
Preference number: 2 (lower is better)
Translates to: MHTKSTPIPLSIIRC*VKIMSRRSTSKTPT
Trigger: GGTGGGTGTCTTTGAAGTGGACCGCCTACTCATGATCTTGACCAAGCAGCGGATGATTGATAATGGAATTGGTGTGGACTTAGTGTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR-3UTR TCA 90 bp CCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCTCTCAAAGGCGGCATTaGGAGAGAAGTTTCCATGGT +
Preference number: 2 (lower is better)
Translates to: PQIYLIHTLLGRKQEVLFSQRRH*ERSFHG
Trigger: ACCATGGAAACTTCTCTCTCAATGCCGCCTTTGAGA...GAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR-3UTR GCA 90 bp CACAGAGGAGGCTGGCATGGAACCCTGAACATACCCATCTGGGAAAACGAGAACGCCAATGGTACATTATaGCACAGATTTACCTCATAC +
Preference number: 2 (lower is better)
Translates to: HRGGWHGTLNIPIWENENANGTL*HRFTSY
Trigger: GTATGAGGTAAATCTGTGGCATAATGTACCATTGGC...GTTCTCGTTTTCCCAGATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR GCA 90 bp CTGAACTTAAATCACCAATGGCAAACACCTTTATTTATTGAGCTTGGAATCTGGGGCGTGGCCAACAGCTaGTGTGACCACAGAGGAGGC +
Preference number: 2 (lower is better)
Translates to: LNLNHQWQTPLFIELGIWGVANS*CDHRGG
Trigger: GCCTCCTCTGTGGTCACAGCAGCTGTTGGCCACGCC...CCAGATTCCAAGCTCAATAAATAAAGGTGTTTGCCATTGGTGATTTAAGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR CCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACGCTGGTGTGAGCCAATaGTACATTATGCCACAGATT +
Preference number: 2 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHAGVSQ*YIMPQI
Trigger: AATCTGTGGCATAATGTACCATTGGCTCACACCAGC...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR CCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCGCTGGTGTGAGCCAATaGTACATTATGCCACAGATT +
Preference number: 2 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSAGVSQ*YIMPQI
Trigger: AATCTGTGGCATAATGTACCATTGGCTCACACCAGC...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR CCA 90 bp TCAGAGGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTGAGTTCAAATCCCAGACACATATGTACAGCTaGTGTGAGCCAATGGTACAT +
Preference number: 2 (lower is better)
Translates to: SEVKSTDCSPRGPEFKSQTHMYS*CEPMVH
Trigger: ATGTACCATTGGCTCACACCAGCTGTACATATGTGT...CTGGGATTTGAACTCAGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CAA 90 bp TACTGTCTGCTCAGTAGTCCTGTCCTGTCCAGAAGATCCTTGTTCTaGCCCAAGGACTTTGAAAAAGAAACCTATCAAGCCAGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: YCLLSSPVLSRRSLF*PKDFEKETYQASSE
Trigger: CTCTGAGCTGGCTTGATAGGTTTCTTTTTCAAAGTCCTTGGGCAAGAACAAGGATCTTCTGGACAGGACAGGACTACTGAGCAGACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CAA 90 bp GTACTGTACTGTCTGCTCAGTAGTCCTGTCCTGTCCAGAAGATCCTaGTTCTTGCCCAAGGACTTTGAAAAAGAAACCTATCAAGCCAGC +
Preference number: 2 (lower is better)
Translates to: VLYCLLSSPVLSRRS*FLPKDFEKETYQAS
Trigger: GCTGGCTTGATAGGTTTCTTTTTCAAAGTCCTTGGGCAAGAACAAGGATCTTCTGGACAGGACAGGACTACTGAGCAGACAGTACAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR GCA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGCTTCACTCACACTTGTaGAGAGGCCAAATATCAGCA +
Preference number: 2 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPLHSHL*RGQISA
Trigger: TGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAG...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR GCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCGCCAATGGTACATTATaGCACAGATTTACCTCATAC +
Preference number: 2 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSANGTL*HRFTSY
Trigger: GTATGAGGTAAATCTGTGGCATAATGTACCATTGGC...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR CCA 90 bp GTTAGGTTTCCTGGAGAGAAGAGAAACAAGGAAGGCTGGACCTGGAGTTGTACAACACATATGTACAGCTaGTGTGAGCCAATGGTACAT +
Preference number: 2 (lower is better)
Translates to: VRFPGEKRNKEGWTWSCTTHMYS*CEPMVH
Trigger: ATGTACCATTGGCTCACACCAGCTGTACATATGTGT...TGTACAACTCCAGGTCCAGCCTTCCTTGTTTCTCTTCTCTCCAGGAAACCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR TCA 90 bp ATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATAAACGAGGCATATTTCTaGCATGACAAGCCTAGAGCT +
Preference number: 2 (lower is better)
Translates to: IYLIHTLLGRKQEVLFRINEAYF*HDKPRA
Trigger: AGCTCTAGGCTTGTCATGTCAGAAATATGCCTCGTT...TATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR GCA 90 bp CACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCCTTCACTCACACTTGTaGAGAGGCCAAATATCAGCA +
Preference number: 2 (lower is better)
Translates to: HICTAGVSQWYIMPQIYLLHSHL*RGQISA
Trigger: TGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAG...GAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR GCA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGGCCAATGGTACATTATaGCACAGATTTACCTCATAC +
Preference number: 2 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPANGTL*HRFTSY
Trigger: GTATGAGGTAAATCTGTGGCATAATGTACCATTGGC...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR GCA 90 bp AGAACAATAAATTGGCCTTTATTCTGCTTCTCTCCGGCTGTTTTCTATCCACTTGTTAAGAGCACTGACTaGTCTCCCAGAGGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: RTINWPLFCFSPAVFYPLVKSTD*SPRGPE
Trigger: CTCAGGACCTCTGGGAGAGCAGTCAGTGCTCTTAAC...AAGTGGATAGAAAACAGCCGGAGAGAAGCAGAATAAAGGCCAATTTATTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR CCA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCTTCAGGGACAGGATTaGCAAGATTTGGTTGGCGGT +
Preference number: 2 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMLQGQD*QDLVGG
Trigger: ACCGCCAACCAAATCTTGCCAATCCTGTCCCTGAAG...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR CCA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACTCATACACACACTCTTaGGCAGAAAGCAGGAGGTTC +
Preference number: 2 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYSYTHS*AESRRF
Trigger: GAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGA...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR TCA 90 bp ATAATCTACTTGGATGGGAAGGGTGTTTTCAGATTCCTTTGGAGTCCCGAGAGAGTGATCCTCTTGAATTaGAGCTCGGTTTATTTCAGG +
Preference number: 2 (lower is better)
Translates to: IIYLDGKGVFRFLWSPERVILLN*SSVYFR
Trigger: CCTGAAATAAACCGAGCTTCAATTCAAGAGGATCAC...TCTCTCGGGACTCCAAAGGAATCTGAAAACACCCTTCCCATCCAAGTAGATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR-3UTR GCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACTTCACTCACACTTGTaGAGAGGCCAAATATCAGCA +
Preference number: 2 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTLHSHL*RGQISA
Trigger: TGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAG...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR CAA 90 bp AAGCTCTTTCAAACGAAAACATCCTTTTTGTTTGTGTGTGCTTATTaGCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGAGTGACCTCA +
Preference number: 2 (lower is better)
Translates to: KLFQTKTSFLFVCAY*LGTVSYCVCPGVTS
Trigger: TGAGGTCACTCCAGGACACACACAGTAAGACACTGTCCCAAGCAAATAAGCACACACAAACAAAAAGGATGTTTTCGTTTGAAAGAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR GCA 90 bp AGAACAATAAATTGGCCTTTATTCTGCTTCTCTCCGGCTGTTTTCTATCCACTTCTTCACTCACACTTGTaGAGAGGCCAAATATCAGCA +
Preference number: 2 (lower is better)
Translates to: RTINWPLFCFSPAVFYPLLHSHL*RGQISA
Trigger: TGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAG...AAGTGGATAGAAAACAGCCGGAGAGAAGCAGAATAAAGGCCAATTTATTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR GCA 90 bp CTGAACTTAAATCACCAATGGCAAACACCTTTATTTATTGAGCTTGGAATCTGGGCCAATGGTACATTATaGCACAGATTTACCTCATAC +
Preference number: 2 (lower is better)
Translates to: LNLNHQWQTPLFIELGIWANGTL*HRFTSY
Trigger: GTATGAGGTAAATCTGTGGCATAATGTACCATTGGC...CCAGATTCCAAGCTCAATAAATAAAGGTGTTTGCCATTGGTGATTTAAGTTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 72 bp CACAGACCTGCAGGTGGCGAGGCGCTGAGCCCGGGATaGGCCAGGCAGCCTGAACACTTGAGCATCGTAGGC +
Preference number: 3 (lower is better)
Translates to: HRPAGGEALSPG*ARQPEHLSIVG
Trigger: GCCTACGATGCTCAAGTGTTCAGGCTGCCTGGCCCATCCCGGGCTCAGCGCCTCGCCACCTGCAGGTCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
3UTR GCA 72 bp CCACACGAGATCACACGGTCTGGCGTGGCCAACAGCTaGTGTGACCACAGAGGAGGCTGGCATGGAACCCTG +
Preference number: 3 (lower is better)
Translates to: PHEITRSGVANS*CDHRGGWHGTL
Trigger: CAGGGTTCCATGCCAGCCTCCTCTGTGGTCACAGCAGCTGTTGGCCACGCCAGACCGTGTGATCTCGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR CAA 90 bp CTCCTGTTCTCTCACAGACCTGCAGGTGGCGAGGCGCTGAGCCCGGGATGGGCCAGGCAGCCTGAACACTaGAGCATCGTAGGCATCATA +
Preference number: 3 (lower is better)
Translates to: LLFSHRPAGGEALSPGWARQPEH*SIVGII
Trigger: TATGATGCCTACGATGCTCAAGTGTTCAGGCTGCCT...GGCCCATCCCGGGCTCAGCGCCTCGCCACCTGCAGGTCTGTGAGAGAACAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
3UTR GCA 72 bp TGGTTGGTGGAGCTGGTAGAGTTCCGTCGCCGCCGCTaGTGCCCTGAAAACTTGCGTTTGGAGTACGGCAGC +
Preference number: 3 (lower is better)
Translates to: WLVELVEFRRRR*CPENLRLEYGS
Trigger: GCTGCCGTACTCCAAACGCAAGTTTTCAGGGCAGCAGCGGCGGCGACGGAACTCTACCAGCTCCACCAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR CCA 72 bp AGCTGTCATCAGAAGCCTGGCTCCTCACTTCCTCAGTaGGCAGTGCACGGCTTGGCAGGGAAGGGCTGGATG +
Preference number: 3 (lower is better)
Translates to: SCHQKPGSSLPQ*AVHGLAGKGWM
Trigger: CATCCAGCCCTTCCCTGCCAAGCCGTGCACTGCCCACTGAGGAAGTGAGGAGCCAGGCTTCTGATGACAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR TCA 72 bp GGAGCTGGTAGAGTTCCGTCGCCGCCGCTGCTGCCCTaGAAACTTGCGTTTGGAGTACGGCAGCTGAAGGAA +
Preference number: 3 (lower is better)
Translates to: GAGRVPSPPLLP*KLAFGVRQLKE
Trigger: TTCCTTCAGCTGCCGTACTCCAAACGCAAGTTTTCAGGGCAGCAGCGGCGGCGACGGAACTCTACCAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR CCA 72 bp GACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTaGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: DNLCLPLLQGQD*QDLVGGSGSSC
Trigger: GCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR TCA 72 bp GTAGGCGGTCCACTTCAAAGACACCCACCCCCGGCGTaGTCACCACAGACATCTGCCCAGTTCGGTCAAAGT +
Preference number: 3 (lower is better)
Translates to: VGGPLQRHPPPA*SPQTSAQFGQS
Trigger: ACTTTGACCGAACTGGGCAGATGTCTGTGGTGATCACGCCGGGGGTGGGTGTCTTTGAAGTGGACCGCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR TCA 72 bp GTTCTCCAGGACATCTCGGGTGCTGGTGTAGCCCAGTaGGCTGCTGACTTCATACTGGTGCAGGTGGGGGTT +
Preference number: 3 (lower is better)
Translates to: VLQDISGAGVAQ*AADFILVQVGV
Trigger: AACCCCCACCTGCACCAGTATGAAGTCAGCAGCTCACTGGGCTACACCAGCACCCGAGATGTCCTGGAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR CCA 72 bp GCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTaGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATCTT +
Preference number: 3 (lower is better)
Translates to: ASPCFRDRIGKI*LAVAAAAASNL
Trigger: AAGATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR CAA 90 bp TGGTTGGTGGAGCTGGTAGAGTTCCGTCGCCGCCGCTGCTGCCCTGAAAACTTGAGTCGGTTGTCACGGTaGATGCAGAAATCCGTGAAG +
Preference number: 3 (lower is better)
Translates to: WLVELVEFRRRRCCPENLSRLSR*MQKSVK
Trigger: CTTCACGGATTTCTGCATCAACCGTGACAACCGACT...CAAGTTTTCAGGGCAGCAGCGGCGGCGACGGAACTCTACCAGCTCCACCAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR TCA 72 bp GAGTCCCCTGGAACTCCAGGTATGGATGGCTGTGAGTaGCCTCACGCTGGCACTGAACTCAGGTGCTCTGTA +
Preference number: 3 (lower is better)
Translates to: ESPGTPGMDGCE*PHAGTELRCSV
Trigger: TACAGAGCACCTGAGTTCAGTGCCAGCGTGAGGTCACTCACAGCCATCCATACCTGGAGTTCCAGGGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR GCA 72 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTaGTTCAGGGACAGGATTGGCAAGATTTGGTTGGCG +
Preference number: 3 (lower is better)
Translates to: TDSLPRTICASP*FRDRIGKIWLA
Trigger: CGCCAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR GCA 72 bp CCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTaGCTACCCCACTCCCAGACACTGACTCACTCCCAC +
Preference number: 3 (lower is better)
Translates to: PLLVKEKDPNGS*LPHSQTLTHSH
Trigger: GTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAGCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR GCA 72 bp AGCACTCACTGGACGTGTAGGGAATGCCGTGATGTCTaGTTCCCTGAGCTGGCCCATCCACTTAACGAGGCA +
Preference number: 3 (lower is better)
Translates to: STHWTCRECRDV*FPELAHPLNEA
Trigger: TGCCTCGTTAAGTGGATGGGCCAGCTCAGGGAAGCAGACATCACGGCATTCCCTACACGTCCAGTGAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR CAA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGGCTTCAGGGACAGGATaGGCAAGATTTGGTTGGCGG +
Preference number: 3 (lower is better)
Translates to: RTICASPCFRDRIGKIWLASGTG*ARFGWR
Trigger: CCGCCAACCAAATCTTGCCAATCCTGTCCCTGAAGC...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR-3UTR CAA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATAGCCGGTCCGTTCGGTaGTTCACATCAACATCCAGG +
Preference number: 3 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNSRSVR*FTSTSR
Trigger: CCTGGATGTTGATGTGAACAACCGAACGGACCGGCT...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR-3UTR CAA 90 bp CACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGCTGCCCTGAAAACTaGCGTTTGGAGTACGGCAGC +
Preference number: 3 (lower is better)
Translates to: HGQSVPPPASGTGLARFGCCPEN*RLEYGS
Trigger: GCTGCCGTACTCCAAACGCAAGTTTTCAGGGCAGCA...ACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR GCA 72 bp GGGACCAGCAAGAAGCCACAGGAGGTAGCTTTTCGATaGCAACCTTGGACCATCTCAAACAGCACTGTGGCA +
Preference number: 3 (lower is better)
Translates to: GTSKKPQEVAFR*QPWTISNSTVA
Trigger: TGCCACAGTGCTGTTTGAGATGGTCCAAGGTTGGCATCGAAAAGCTACCTCCTGTGGCTTCTTGCTGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR CCA 72 bp CCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATaGAGCACTGGCATGCATCTTCTCCAGGCAGTTTGT +
Preference number: 3 (lower is better)
Translates to: PTASLKRSSLAS*STGMHLLQAVC
Trigger: ACAAACTGCCTGGAGAAGATGCATGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
3UTR-3UTR CAA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGCTCATACACACACTCTaGGGCAGAAAGCAGGAGGTT +
Preference number: 3 (lower is better)
Translates to: RTICASPCFRDRIGKIWLLIHTL*GRKQEV
Trigger: AACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR TCA 72 bp AAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTGGTaGAGGAAAAGGACCCTAATGGAAGCTGCCTACCCC +
Preference number: 3 (lower is better)
Translates to: KQEVLFRISHCW*RKRTLMEAAYP
Trigger: GGGGTAGGCAGCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACCTCCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR TCA 72 bp GATGAGACATCACAGGAGCTTGCACTTTTGCGACTGTaGTTCTCCTGTTCTCTCACAGACCTGCAGGTGGCG +
Preference number: 3 (lower is better)
Translates to: DETSQELALLRL*FSCSLTDLQVA
Trigger: CGCCACCTGCAGGTCTGTGAGAGAACAGGAGAATCACAGTCGCAAAAGTGCAAGCTCCTGTGATGTCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
3UTR CCA 72 bp CGTGTAGGGAATGCCGTGATGTCTGCTTCCCTGAGCTaGCCCATCCACTTAACGAGGCATATTTCTGACATG +
Preference number: 3 (lower is better)
Translates to: RVGNAVMSASLS*PIHLTRHISDM
Trigger: CATGTCAGAAATATGCCTCGTTAAGTGGATGGGCCAGCTCAGGGAAGCAGACATCACGGCATTCCCTACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 72 bp AAGAAGCCACAGGAGGTAGCTTTTCGATGCCAACCTTaGACCATCTCAAACAGCACTGTGGCAGTCACTGCC +
Preference number: 3 (lower is better)
Translates to: KKPQEVAFRCQP*TISNSTVAVTA
Trigger: GGCAGTGACTGCCACAGTGCTGTTTGAGATGGTCCAAGGTTGGCATCGAAAAGCTACCTCCTGTGGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR-3UTR CAA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGCCATCCAGTGTAGCTaGATCTCAAAGGCGGCATTG +
Preference number: 3 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTAIQCS*ISKAAL
Trigger: CAATGCCGCCTTTGAGATCAAGCTACACTGGATGGC...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR TCA 72 bp TTCCATTATCAATCATCCGCTGCTTGGTCAAGATCATaGGTAGGCGGTCCACTTCAAAGACACCCACCCCCG +
Preference number: 3 (lower is better)
Translates to: FHYQSSAAWSRS*VGGPLQRHPPP
Trigger: CGGGGGTGGGTGTCTTTGAAGTGGACCGCCTACTCATGATCTTGACCAAGCAGCGGATGATTGATAATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR TCA 72 bp GTCGAGAATCCCTCGGAACACTCCGGTTATGTAGCTTaGATAATGGCACAGCATGTAGTGGCTGCTCTCCCA +
Preference number: 3 (lower is better)
Translates to: VENPSEHSGYVA*IMAQHVVAALP
Trigger: TGGGAGAGCAGCCACTACATGCTGTGCCATTATTCAAGCTACATAACCGGAGTGTTCCGAGGGATTCTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR GCA 72 bp GCAGCTGCTTCCAATCTTTCTCTTCACTCACACTTGTaGAGAGGCCAAATATCAGCAGTGGCCCCACTCACT +
Preference number: 3 (lower is better)
Translates to: AAASNLSLHSHL*RGQISAVAPLT
Trigger: AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR GCA 72 bp GATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTaGTTCCAATCTTTCTCTTCACTCACACTTGTGCAG +
Preference number: 3 (lower is better)
Translates to: DWQDLVGGSGSS*FQSFSSLTLVQ
Trigger: CTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR TCA 72 bp TGCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGAGTaGCCTCAAAATCACAGCAACCTTCTTCCCTCTCCT +
Preference number: 3 (lower is better)
Translates to: CLGQCLTVCVLE*PQNHSNLLPSP
Trigger: AGGAGAGGGAAGAAGGTTGCTGTGATTTTGAGGTCACTCCAGGACACACACAGTAAGACACTGTCCCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR TCA 72 bp GTTTGGAGTACGGCAGCTGAAGGAACACCGTTCCTGTaGCATGGATATACTGTGGCTTATTCTCAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: VWSTAAEGTPFL*HGYTVAYSQQG
Trigger: TCCCTGCTGAGAATAAGCCACAGTATATCCATGTCACAGGAACGGTGTTCCTTCAGCTGCCGTACTCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR TCA 72 bp TGCTGCCCTGAAAACTTGCGTTTGGAGTACGGCAGCTaGAGGAACACCGTTCCTGTGACATGGATATACTGT +
Preference number: 3 (lower is better)
Translates to: CCPENLRLEYGS*RNTVPVTWIYC
Trigger: ACAGTATATCCATGTCACAGGAACGGTGTTCCTTCAGCTGCCGTACTCCAAACGCAAGTTTTCAGGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR GCA 72 bp CAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTaGTGCGGTTACAGGTACACTCCACAAAGTCCAGCT +
Preference number: 3 (lower is better)
Translates to: QQPSSLSFSLLK*CGYRYTPQSPA
Trigger: AGCTGGACTTTGTGGAGTGTACCTGTAACCGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 72 bp ACTATGGAGGCCAGCCTACCTCAGTCTCCTAAACACTaGTATTACAGGAAGCTGCTGTACCTGCTTGGAGTA +
Preference number: 3 (lower is better)
Translates to: TMEASLPQSPKH*YYRKLLYLLGV
Trigger: TACTCCAAGCAGGTACAGCAGCTTCCTGTAATACCAGTGTTTAGGAGACTGAGGTAGGCTGGCCTCCATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR GCA 72 bp CAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTaGGGTTACAGGTACACTCCACAAAGTCCAGCTGTA +
Preference number: 3 (lower is better)
Translates to: QPSSLSFSLLKC*GYRYTPQSPAV
Trigger: TACAGCTGGACTTTGTGGAGTGTACCTGTAACCGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR CAA 90 bp GATGGGAAGGGTGTTTTCAGATTCCTTTGGAGTCCCGAGAGATGTATCACGACCTGCTTGTCAAACACATaGAATGACAAGTTGATGGCC +
Preference number: 3 (lower is better)
Translates to: DGKGVFRFLWSPERCITTCLSNT*NDKLMA
Trigger: GGCCATCAACTTGTCATTCAATGTGTTTGACAAGCA...GGTCGTGATACATCTCTCGGGACTCCAAAGGAATCTGAAAACACCCTTCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR TCA 72 bp CCTGTCCAGAAGATCCTTGTTCTTGCCCAAGGACTTTaGAAAAGAAACCTATCAAGCCAGCTCAGAGCCAGA +
Preference number: 3 (lower is better)
Translates to: PVQKILVLAQGL*KRNLSSQLRAR
Trigger: TCTGGCTCTGAGCTGGCTTGATAGGTTTCTTTTTCAAAGTCCTTGGGCAAGAACAAGGATCTTCTGGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR GCA 72 bp CTCCATTATCAAAAAGGTACAGGCTTGTGTGGACGGTaGTTCAGGAACTTCCAATTCCACTCCAGTAGAGTG +
Preference number: 3 (lower is better)
Translates to: LHYQKGTGLCGR*FRNFQFHSSRV
Trigger: CACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACCTTTTTGATAATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
3UTR TCA 72 bp CCTGAGCTGGCCCATCCACTTAACGAGGCATATTTCTaGCATGACAAGCCTAGAGCTTCTTACTATACTGTA +
Preference number: 3 (lower is better)
Translates to: PELAHPLNEAYF*HDKPRASYYTV
Trigger: TACAGTATAGTAAGAAGCTCTAGGCTTGTCATGTCAGAAATATGCCTCGTTAAGTGGATGGGCCAGCTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR TCA 72 bp GGCAAGACAATACTTGGTTTTACTTTTGTAGTGTTGTaGATTGAGTCCAGAGCCTGGTGCCTGCTATGCTGG +
Preference number: 3 (lower is better)
Translates to: GKTILGFTFVVL*IESRAWCLLCW
Trigger: CCAGCATAGCAGGCACCAGGCTCTGGACTCAATTCACAACACTACAAAAGTAAAACCAAGTATTGTCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR GCA 72 bp ACTAAGTCCACACCAATTCCATTATCAATCATCCGCTaGTTGGTCAAGATCATGAGTAGGCGGTCCACTTCA +
Preference number: 3 (lower is better)
Translates to: TKSTPIPLSIIR*LVKIMSRRSTS
Trigger: TGAAGTGGACCGCCTACTCATGATCTTGACCAAGCAGCGGATGATTGATAATGGAATTGGTGTGGACTTAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR GCA 72 bp TTATGTAGCTTGAATAATGGCACAGCATGTAGTGGCTaGTCTCCCATGCACACTAAGTCCACACCAATTCCA +
Preference number: 3 (lower is better)
Translates to: LCSLNNGTACSG*SPMHTKSTPIP
Trigger: TGGAATTGGTGTGGACTTAGTGTGCATGGGAGAGCAGCCACTACATGCTGTGCCATTATTCAAGCTACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR CCA 72 bp ACATTATGCCACAGATTTACCTCATACACACACTCTTaGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCC +
Preference number: 3 (lower is better)
Translates to: TLCHRFTSYTHS*AESRRFCSEYP
Trigger: GGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGCATAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR CCA 72 bp CTCATTGTAAAGCTCAACTTTGCTAAGTACACACTATaGAGGCCAGCCTACCTCAGTCTCCTAAACACTGGT +
Preference number: 3 (lower is better)
Translates to: LIVKLNFAKYTL*RPAYLSLLNTG
Trigger: ACCAGTGTTTAGGAGACTGAGGTAGGCTGGCCTCCATAGTGTGTACTTAGCAAAGTTGAGCTTTACAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 72 bp AGAGGAGGCTGGCATGGAACCCTGAACATACCCATCTaGGAAAACGAGAACTTGATTTACTCTCTTTTCAGT +
Preference number: 3 (lower is better)
Translates to: RGGWHGTLNIPI*ENENLIYSLFS
Trigger: ACTGAAAAGAGAGTAAATCAAGTTCTCGTTTTCCCAGATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR-3UTR CAA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGAACGTGACCAGTCGGTaGTCACGGTTGATGCAGAAA +
Preference number: 3 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMNVTSR*SRLMQK
Trigger: TTTCTGCATCAACCGTGACAACCGACTGGTCACGTT...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
3UTR-3UTR CAA 90 bp GAACACTTGAGCATCGTAGGCATCATAATCTACTTGGATGGGAAGGGTGTTTTCGTATCACGACCATTTTaGGTTTTCTCAGAGGCAGAC +
Preference number: 3 (lower is better)
Translates to: EHLSIVGIIIYLDGKGVFVSRPF*VFSEAD
Trigger: GTCTGCCTCTGAGAAAACCAAAAATGGTCGTGATAC...GAAAACACCCTTCCCATCCAAGTAGATTATGATGCCTACGATGCTCAAGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
3UTR GCA 72 bp TCAGTAGTCCTGTCCTGTCCAGAAGATCCTTGTTCTTaGCCAAGGACTTTGAAAAAGAAACCTATCAAGCCA +
Preference number: 3 (lower is better)
Translates to: SVVLSCPEDPCS*PRTLKKKPIKP
Trigger: TGGCTTGATAGGTTTCTTTTTCAAAGTCCTTGGGCAAGAACAAGGATCTTCTGGACAGGACAGGACTACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 72 bp TCTTGCACAAATCCAAACCTGTGTGCAATGGCTTCCTaGAAAAGATGCATTCGATCCCAATATGTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: SCTNPNLCAMAS*KRCIRSQYVSG
Trigger: ACCAGAGACATATTGGGATCGAATGCATCTTTTCCAGGAAGCCATTGCACACAGGTTTGGATTTGTGCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR CCA 72 bp ATCTACTTGGATGGGAAGGGTGTTTTCAGATTCCTTTaGAGTCCCGAGAGATGTATCACGACCATTTTTGGT +
Preference number: 3 (lower is better)
Translates to: IYLDGKGVFRFL*SPERCITTIFG
Trigger: ACCAAAAATGGTCGTGATACATCTCTCGGGACTCCAAAGGAATCTGAAAACACCCTTCCCATCCAAGTAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
3UTR-3UTR CAA 90 bp CTGAACTTAAATCACCAATGGCAAACACCTTTATTTATTGAGCTTGGAATCTGGAGTCGGTTGTCACGGTaGATGCAGAAATCCGTGAAG +
Preference number: 3 (lower is better)
Translates to: LNLNHQWQTPLFIELGIWSRLSR*MQKSVK
Trigger: CTTCACGGATTTCTGCATCAACCGTGACAACCGACT...CCAGATTCCAAGCTCAATAAATAAAGGTGTTTGCCATTGGTGATTTAAGTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
3UTR CCA 72 bp CCATATAGGTCTGGGGAGCTGAACTTAAATCACCAATaGCAAACACCTTTATTTATTGAGCTTGGAATCTGG +
Preference number: 3 (lower is better)
Translates to: PYRSGELNLNHQ*QTPLFIELGIW
Trigger: CCAGATTCCAAGCTCAATAAATAAAGGTGTTTGCCATTGGTGATTTAAGTTCAGCTCCCCAGACCTATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CCA 72 bp TATATATGTGGATACATGAGTACCACAACATCTGTGTaGCCATCAGAGAACTTTCTGGAGTTGATCCTTTCC +
Preference number: 3 (lower is better)
Translates to: YICGYMSTTTSV*PSENFLELILS
Trigger: GGAAAGGATCAACTCCAGAAAGTTCTCTGATGGCCACACAGATGTTGTGGTACTCATGTATCCACATATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR TCA 72 bp TTAGATTCTGCTATGTACACATATGTACAGCTGGTGTaGGCCAATGGTACATTATGCCACAGATTTACCTCA +
Preference number: 3 (lower is better)
Translates to: LDSAMYTYVQLV*ANGTLCHRFTS
Trigger: TGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR GCA 72 bp GCTCTTTCAAACGAAAACATCCTTTTTGTTTGTGTGTaGTTATTTGCTTGGGACAGTGTCTTACTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: ALSNENILFVCV*LFAWDSVLLCV
Trigger: CACACACAGTAAGACACTGTCCCAAGCAAATAAGCACACACAAACAAAAAGGATGTTTTCGTTTGAAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR TCA 72 bp GTCCTCATAGAATCTCCCTTTGTGATCCTCTTGAATTaGAGCTCGGTTTATTTCAGGAAATTCATCAATAGA +
Preference number: 3 (lower is better)
Translates to: VLIESPFVILLN*SSVYFRKFINR
Trigger: TCTATTGATGAATTTCCTGAAATAAACCGAGCTTCAATTCAAGAGGATCACAAAGGGAGATTCTATGAGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR CCA 72 bp CAGGTAGTCAAGAGAATTCTAAGTGGCAAGTCTAAATaGAGTGGAGCTGTCTGTTTGATTTTAAGATTTATT +
Preference number: 3 (lower is better)
Translates to: QVVKRILSGKSK*SGAVCLILRFI
Trigger: AATAAATCTTAAAATCAAACAGACAGCTCCACTCCATTTAGACTTGCCACTTAGAATTCTCTTGACTACCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCCAGGTGGCGAGGCGCTaGGCCCGGGATGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: DSLPRTICASPCFRDRIGQVARR*ARDGPG
Trigger: GCCTGGCCCATCCCGGGCTCAGCGCCTCGCCACCTG...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCTGGCGGGAAGTGCTGTaGCTCCCGGCAGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLWREVL*LPAASW
Trigger: CCATGAAGCTGCCGGGAGGCACAGCACTTCCCGCCA...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCGCCTTCTGTTGGAGGTaGGCTTCATGGGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLAFCWR*ASWASS
Trigger: CGAGGATGCCCATGAAGCTCACCTCCAACAGAAGGC...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp TTCCTGGAGAGAAGAGAAACAAGGAAGGCTGGACCTGGAGTTGTACATAGGGCCCAGGTGGCGAGGCGCTaGGCCCGGGATGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FLERRETRKAGPGVVHRAQVARR*ARDGPG
Trigger: GCCTGGCCCATCCCGGGCTCAGCGCCTCGCCACCTG...GGCCCTATGTACAACTCCAGGTCCAGCCTTCCTTGTTTCTCTTCTCTCCAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTGTTCTCTCACAGACCTaGAGGTGGCGAGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PHSQTLTHSHGQSVPPPAVLSQT*RWRGAE
Trigger: CTCAGCGCCTCGCCACCTGCAGGTCTGTGAGAGAAC...AGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp ACCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCTCTGCCTGCTGCCCTaGAGCTCTGCCATGTTTTGC +
Preference number: 4 (lower is better)
Translates to: TCCPEPDRKASSSIPTASLCLLP*SSAMFC
Trigger: GCAAAACATGGCAGAGCTGCAGGGCAGCAGGCAGAG...AGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCGGCTGTCCACATAGGTaGGAGTCATGGCAACACTGC +
Preference number: 4 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLGCPHR*ESWQHC
Trigger: GCAGTGTTGCCATGACTCCCACCTATGTGGACAGCC...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAGGGTAGAAGGCAGATaGTGCTGTGCGTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: DSLPRTICASPCFRDRIGRVEGR*CCAWAA
Trigger: CGCAGCCCACGCACAGCATCATCTGCCTTCTACCCT...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000124780.8
CDS-3UTR TCA 90 bp CTGCCTACCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCTGGGCTGGCCTGTGCTaGCCCCTAAACTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPTPLPDTDSLPRTICASWAGLC*PLNWCC
Trigger: ACAGCACCAGTTTAGGGGTCAGCACAGGCCAGCCCA...GGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTCCTGTTCTCTCACAGACCTGCAGGTGGCGAGGCGCTGAGCCCGGGATGGGCCCTAGCTCATCATCACTaGCCCCAAAGCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LLFSHRPAGGEALSPGWALAHHH*PQSPSC
Trigger: ACAAGAAGGGCTTTGGGGGCAGTGATGATGAGCTAG...GGCCCATCCCGGGCTCAGCGCCTCGCCACCTGCAGGTCTGTGAGAGAACAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR GCA 90 bp ACCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTGGATGTTGGTGCTCTTaGCCAGGGAGCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: TCCPEPDRKASSSIPTASGCWCS*PGSCHQ
Trigger: CTGATGACAGCTCCCTGGGCAAGAGCACCAACATCC...AGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCCTGACTTCATACTGGTaGAGGTGGGGGTTAGGGATC +
Preference number: 4 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLLTSYW*RWGLGI
Trigger: GATCCCTAACCCCCACCTGCACCAGTATGAAGTCAG...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp CTGCCTACCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCGGACATCTCGGGTGCTaGTGTAGCCCAGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPTPLPDTDSLPRTICASGHLGC*CSPVSC
Trigger: GCAGCTCACTGGGCTACACCAGCACCCGAGATGTCC...GGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp ACCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCACATGGAACCTTCCTaGTGCACTGGAGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TCCPEPDRKASSSIPTASHMEPS*CTGVPL
Trigger: CAGAGGGACTCCAGTGCACCAGGAAGGTTCCATGTG...AGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCGATGGCCTCTCCAGATaGGCCTACAGGAAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLDGLSR*AYRKSV
Trigger: CACACTTTTCCTGTAGGCCCATCTGGAGAGGCCATC...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAGCTCTGCAGAGGAGTaGGTAGGGTCCCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: DSLPRTICASPCFRDRIGSSAEE*VGSLCL
Trigger: CAGGCAGAGGGACCCTACCCACTCCTCTGCAGAGCT...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTCAGGTGGCGAGGCGCTaGGCCCGGGATGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGQVARR*ARDGPG
Trigger: GCCTGGCCCATCCCGGGCTCAGCGCCTCGCCACCTG...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp CAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGACAGGTGGCGAGGCGCTaGGCCCGGGATGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QIYLIHTLLGRKQEVLFRQVARR*ARDGPG
Trigger: GCCTGGCCCATCCCGGGCTCAGCGCCTCGCCACCTG...TCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCGCCTTCTGTTGGAGGTaGGCTTCATGGGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: DSLPRTICASPCFRDRIGAFCWR*ASWASS
Trigger: CGAGGATGCCCATGAAGCTCACCTCCAACAGAAGGC...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACATGGGCTGGCCTGTGCTaGCCCCTAAACTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTWAGLC*PLNWCC
Trigger: ACAGCACCAGTTTAGGGGTCAGCACAGGCCAGCCCA...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCACAGCATGTAGTGGCTaGTCTCCCATGCACACTAAG +
Preference number: 4 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLTACSG*SPMHTK
Trigger: CTTAGTGTGCATGGGAGAGCAGCCACTACATGCTGT...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp ACCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTGAGTCATGGCAACACTaGTGTTCTCAGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TCCPEPDRKASSSIPTASESWQH*CSQLAE
Trigger: CTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTC...AGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ACCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTGATGAAGGTCCGCCATaGTTCACCAGATGCATGCGT +
Preference number: 4 (lower is better)
Translates to: TCCPEPDRKASSSIPTASDEGPP*FTRCMR
Trigger: ACGCATGCATCTGGTGAAGCATGGCGGACCTTCATC...AGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCGCAGGAATCTCAGAGTaGACAAGCTCTTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLAGISE*TSSSAT
Trigger: TGTGGCAGAAGAGCTTGTGCACTCTGAGATTCCTGC...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGCGTCGCCGCCGCTGCTaGCCTGAAAACTTGCGTTTG +
Preference number: 4 (lower is better)
Translates to: LTHSHGQSVPPPASGTGLRRRRC*PENLRL
Trigger: CAAACGCAAGTTTTCAGGGCAGCAGCGGCGGCGACG...CAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAATGCTGTCACCAGGCTaGCGGGAAGTGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTMLSPG*REVLCL
Trigger: GAGGCACAGCACTTCCCGCCAGCCTGGTGACAGCAT...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCGCCTGTTCTATGTTCTaGGAGTTCCCAAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLACSMF*EFPKVW
Trigger: CCAGACCTTTGGGAACTCCCAGAACATAGAACAGGC...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTCCCATCGCCTGCGTCTaGACCCCCTCCACGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TDSLPRTICASPCFRDRIPIACV*TPSTLF
Trigger: GAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGG...AATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp CTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGGAAGTAGTCAGTGGTaGGGGGAAGGCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LTHSHGQSVPPPASGTGLGSSQW*GEGMQE
Trigger: CTCCTGCATGCCTTCCCCTCACCACTGACTACTTCC...CAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ACTGCAGGAACTGGAGCTCAAGGCCAGGAGCATCTCAGGACAGCTGATAGGCAAGGTCCCTCTGCCTGCTaGCCTGCAGCTCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: TAGTGAQGQEHLRTADRQGPSAC*PAALPC
Trigger: ACATGGCAGAGCTGCAGGGCAGCAGGCAGAGGGACC...TTGCCTATCAGCTGTCCTGAGATGCTCCTGGCCTTGAGCTCCAGTTCCTGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATTGGCGGGAAGTGCTGTaGCTCCCGGCAGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNWREVL*LPAASW
Trigger: CCATGAAGCTGCCGGGAGGCACAGCACTTCCCGCCA...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTGCCTACCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCGTGCACAGTCGTCTaGTGTTCTCCTAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LPTPLPDTDSLPRTICASPCTVV*CSPRLF
Trigger: GAAGAGCCTAGGAGAACAGCAGACGACTGTGCACGG...GGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAGGCAGATGATGCTGTaGGTGGGCTGCGGACAAACT +
Preference number: 4 (lower is better)
Translates to: DSLPRTICASPCFRDRIGRQMML*VGCGQT
Trigger: AGTTTGTCCGCAGCCCACGCACAGCATCATCTGCCT...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp ACCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTTGTTTGGTCCACAGATaGCTGAGGGTAGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TCCPEPDRKASSSIPTASCLVHR*LRVEGR
Trigger: TCTGCCTTCTACCCTCAGGCATCTGTGGACCAAACA...AGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp ACCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTGCTTCACCAGATGCATaGGTTATGAGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TCCPEPDRKASSSIPTASASPDA*VMSCSS
Trigger: GGAAGAGCAGCTCATAACGCATGCATCTGGTGAAGC...AGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTGCCTACCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCATGGTAGTAACAGCTaGACCATTCCAGCCGGTCCG +
Preference number: 4 (lower is better)
Translates to: LPTPLPDTDSLPRTICASHGSNS*TIPAGP
Trigger: CGGACCGGCTGGAATGGTGCAGCTGTTACTACCATG...GGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTGCCTACCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCTGCTGACTTCATACTaGTGCAGGTGGGGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: LPTPLPDTDSLPRTICASLLTSY*CRWGLG
Trigger: CCCTAACCCCCACCTGCACCAGTATGAAGTCAGCAG...GGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTTCCTTTCTTGCCGACTaGAGGGCCTGCTGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: TDSLPRTICASPCFRDRISFLAD*RACCLE
Trigger: CTCGAGGCAGCAGGCCCTCCAGTCGGCAAGAAAGGA...AATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCGAGTTCCCAAAGGTCTaGTTGTTGCCTCTATCCATG +
Preference number: 4 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLEFPKV*LLPLSM
Trigger: CATGGATAGAGGCAACAACCAGACCTTTGGGAACTC...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTGCCTACCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCTGTTCAGACAGCAGCTaGACTCCTGTCGAGGGATGC +
Preference number: 4 (lower is better)
Translates to: LPTPLPDTDSLPRTICASCSDSS*TPVEGC
Trigger: GCATCCCTCGACAGGAGTCCAGCTGCTGTCTGAACA...GGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GGTAACTGGGCAGAGCAAAAGGACCCTCCAAAACTGGGACCAGCAAGAAGCCACCCCATCGCCTGCGTCTaGACCCCCTCCACGTTGTTC +
Preference number: 4 (lower is better)
Translates to: GNWAEQKDPPKLGPARSHPIACV*TPSTLF
Trigger: GAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGG...GTGGCTTCTTGCTGGTCCCAGTTTTGGAGGGTCCTTTTGCTCTGCCCAGTTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR TCA 90 bp TGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCTCACGGCTTGGTCAAGATCATaGGTAGGCGGTCCACTTCAA +
Preference number: 4 (lower is better)
Translates to: WSSGRTQVPNPAPKWWLTAWSRS*VGGPLQ
Trigger: TTGAAGTGGACCGCCTACTCATGATCTTGACCAAGC...CGTGAGCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCTTAATCAGCGCTCTCTaGGGCGTGTATCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: DSLPRTICASPCFRDRIGLISAL*GVYPPG
Trigger: ACCTGGAGGATACACGCCTCAGAGAGCGCTGATTAA...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
CDS-3UTR TCA 90 bp GCACTTGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCGCTCTTCCGTTCCACTaGAGTTCAAGGACATGCTGT +
Preference number: 4 (lower is better)
Translates to: ALGALGGPRFPTQHPNGGALPFH*SSRTCC
Trigger: ACAGCATGTCCTTGAACTTCAGTGGAACGGAAGAGC...GCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCAAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp GGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTGGAAGTAGTCAGTGGTaGGGGGAAGGCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GWRDGSEVKSTDCSPRGPGSSQW*GEGMQE
Trigger: CTCCTGCATGCCTTCCCCTCACCACTGACTACTTCC...AGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACCTCTGAGCCATCTCTCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp CAGCCGGTCCGTTCGGTTGTTCACATCAACATCCAGGGTCACAGTCCTCTGCTCGGAAGTAGTCAGTGGTaGGGGGAAGGCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QPVRSVVHINIQGHSPLLGSSQW*GEGMQE
Trigger: CTCCTGCATGCCTTCCCCTCACCACTGACTACTTCC...GAGCAGAGGACTGTGACCCTGGATGTTGATGTGAACAACCGAACGGACCGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR TCA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCTCTCCTAGGCTCTTCTaGCTAGCTTCCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DSLPRTICASPCFRDRIGSPRLF*LASISS
Trigger: GCTGGAGATGGAAGCTAGTCAGAAGAGCCTAGGAGA...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTTGGGCTGGCCTGTGCTaGCCCCTAAACTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFWAGLC*PLNWCC
Trigger: ACAGCACCAGTTTAGGGGTCAGCACAGGCCAGCCCA...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTCTAGCTCATCATCACTaGCCCCAAAGCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PHSQTLTHSHGQSVPPPALAHHH*PQSPSC
Trigger: ACAAGAAGGGCTTTGGGGGCAGTGATGATGAGCTAG...AGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCGTGGCTGCTCTCCCATaGACACTAAGTCCACACCAA +
Preference number: 4 (lower is better)
Translates to: DSLPRTICASPCFRDRIGVAALP*TLSPHQ
Trigger: TTGGTGTGGACTTAGTGTGCATGGGAGAGCAGCCAC...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp CCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTCCTACAGGAAAAGTGTaGATCCAGCGCCTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: PHSQTLTHSHGQSVPPPAPTGKV*IQRLLL
Trigger: CAACAGAAGGCGCTGGATGCACACTTTTCCTGTAGG...AGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTCTCTGCCTGCTGCCCTaGAGCTCTGCCATGTTTTGC +
Preference number: 4 (lower is better)
Translates to: GWRDGSEVKSTDCSPRGPLCLLP*SSAMFC
Trigger: GCAAAACATGGCAGAGCTGCAGGGCAGCAGGCAGAG...AGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACCTCTGAGCCATCTCTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp TACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACTGGCATGCGACTGGAGGGCCTGCTaGCTCGAGAGAGTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: YPQPLLREAAWLHGALACDWRAC*LERVCR
Trigger: TCTGCACACTCTCTCGAGGCAGCAGGCCCTCCAGTC...GCATGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp TGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCTCACGGTAGTCACCAGAGTTTaGAGAGGGAAAGGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: WSSGRTQVPNPAPKWWLTVVTRV*RGKGLF
Trigger: GAACAGGCCTTTCCCTCTGCAAACTCTGGTGACTAC...CGTGAGCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCGATGAAGGTCCGCCATaGTTCACCAGATGCATGCGT +
Preference number: 4 (lower is better)
Translates to: DSLPRTICASPCFRDRIGDEGPP*FTRCMR
Trigger: ACGCATGCATCTGGTGAAGCATGGCGGACCTTCATC...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGAGCTGTGTCTGCTTaGATAAGAGGCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: TDSLPRTICASPCFRDRIGAVSA*IRGWPA
Trigger: AGCCGGCCAGCCTCTTATGCAAGCAGACACAGCTCC...AATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CCATTCCAGCCGGTCCGTTCGGTTGTTCACATCAACATCCAGGGTCACAGTCCTTCCTTTCTTGCCGACTaGAGGGCCTGCTGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: PFQPVRSVVHINIQGHSPSFLAD*RACCLE
Trigger: CTCGAGGCAGCAGGCCCTCCAGTCGGCAAGAAAGGA...AGGACTGTGACCCTGGATGTTGATGTGAACAACCGAACGGACCGGCTGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR CCA 90 bp ACCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTGAGTTCCCAAAGGTCTaGTTGTTGCCTCTATCCATG +
Preference number: 4 (lower is better)
Translates to: TCCPEPDRKASSSIPTASEFPKV*LLPLSM
Trigger: CATGGATAGAGGCAACAACCAGACCTTTGGGAACTC...AGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTGCCTACCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCACTTGCGTTGGAAGCTaGCAAAGTCATCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPTPLPDTDSLPRTICASTCVGS*QSHPLL
Trigger: CAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGT...GGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTTCAAACCACTTGCGTTaGAAGCTGGCAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: TCCPEPDRKASSSIPTASSNHLR*KLAKSS
Trigger: GGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGA...AGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR CAA 72 bp TGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTaGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATCT +
Preference number: 4 (lower is better)
Translates to: CLPLLQGQDWQD*VGGSGSSCFQS
Trigger: AGATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR CAA 72 bp CCAGTTGTAGCCAACCCGCTCCTCACAGAACATGTTTaGGTTGGTGGAGCTGGTAGAGTTCCGTCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PVVANPLLTEHV*VGGAGRVPSPP
Trigger: CGGCGGCGACGGAACTCTACCAGCTCCACCAACCAAAACATGTTCTGTGAGGAGCGGGTTGGCTACAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
3UTR CAA 72 bp GCGCTGAGCCCGGGATGGGCCAGGCAGCCTGAACACTaGAGCATCGTAGGCATCATAATCTACTTGGATGGG +
Preference number: 4 (lower is better)
Translates to: ALSPGWARQPEH*SIVGIIIYLDG
Trigger: CCCATCCAAGTAGATTATGATGCCTACGATGCTCAAGTGTTCAGGCTGCCTGGCCCATCCCGGGCTCAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
3UTR CAA 72 bp AGGTGGGGGTTAGGGATCATCAGGATGTTGGTGCTCTaGCCCAGGGAGCTGTCATCAGAAGCCTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RWGLGIIRMLVL*PRELSSEAWLL
Trigger: GAGGAGCCAGGCTTCTGATGACAGCTCCCTGGGCAAGAGCACCAACATCCTGATGATCCCTAACCCCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR TCA 90 bp ACCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTGTAGTTTCCTTGTGCTaGGGTAGAATTGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TCCPEPDRKASSSIPTASVVSLC*GRIVSL
Trigger: CAAGGAGACAATTCTACCTCAGCACAAGGAAACTAC...AGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCTCCGGTTATGTAGCTTaGATAATGGCACAGCATGTA +
Preference number: 4 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLSGYVA*IMAQHV
Trigger: TACATGCTGTGCCATTATTCAAGCTACATAACCGGA...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATATGGGCCAGGCAGCCTaGACACTTGAGCATCGTAGG +
Preference number: 4 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNMGQAA*TLEHRR
Trigger: CCTACGATGCTCAAGTGTTCAGGCTGCCTGGCCCAT...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp AGCACTGGCATGCATCTTCTCCAGGCAGTTTGTCCAGAACGTGACCAGTCGGTTAGGGTAGAAGGCAGATaGTGCTGTGCGTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: STGMHLLQAVCPERDQSVRVEGR*CCAWAA
Trigger: CGCAGCCCACGCACAGCATCATCTGCCTTCTACCCT...AACCGACTGGTCACGTTCTGGACAAACTGCCTGGAGAAGATGCATGCCAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR TCA 90 bp CTCCCAGAGGTCCTGAGTTCAAATCCCAGCAAGCACATGGTGGCTCAGAACCATTGGGCTGGCCTGTGCTaGCCCCTAAACTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPEVLSSNPSKHMVAQNHWAGLC*PLNWCC
Trigger: ACAGCACCAGTTTAGGGGTCAGCACAGGCCAGCCCA...ATGGTTCTGAGCCACCATGTGCTTGCTGGGATTTGAACTCAGGACCTCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CTGCCTACCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCACAGCATGTAGTGGCTaGTCTCCCATGCACACTAAG +
Preference number: 4 (lower is better)
Translates to: LPTPLPDTDSLPRTICASTACSG*SPMHTK
Trigger: CTTAGTGTGCATGGGAGAGCAGCCACTACATGCTGT...GGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp ACTGCAGGAACTGGAGCTCAAGGCCAGGAGCATCTCAGGACAGCTGATAGGCAACTCTGCCTGCTGCCCTaGAGCTCTGCCATGTTTTGC +
Preference number: 4 (lower is better)
Translates to: TAGTGAQGQEHLRTADRQLCLLP*SSAMFC
Trigger: GCAAAACATGGCAGAGCTGCAGGGCAGCAGGCAGAG...TTGCCTATCAGCTGTCCTGAGATGCTCCTGGCCTTGAGCTCCAGTTCCTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGGGTCCCTCTGCCTGCTaGCCTGCAGCTCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVEGPSAC*PAALPC
Trigger: ACATGGCAGAGCTGCAGGGCAGCAGGCAGAGGGACC...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGGGTAGGGTCCCTCTaGCTGCTGCCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVEWVGSL*LLPCSS
Trigger: AGAGCTGCAGGGCAGCAGGCAGAGGGACCCTACCCA...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGGCGGGAAGTGCTGTaGCTCCCGGCAGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVEWREVL*LPAASW
Trigger: CCATGAAGCTGCCGGGAGGCACAGCACTTCCCGCCA...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp CCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTAATCCACTCCAACTGTaGAACAGAAGCCTGGCATTG +
Preference number: 4 (lower is better)
Translates to: PHSQTLTHSHGQSVPPPANPLQL*NRSLAL
Trigger: CAATGCCAGGCTTCTGTTGCACAGTTGGAGTGGATT...AGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTATGGGCCCGGTCATCTaGAAGCCTTTCATGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TDSLPRTICASPCFRDRIMGPVI*KPFMAV
Trigger: GACTGCCATGAAAGGCTTGCAGATGACCGGGCCCAT...AATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCTCACGAATCCACTCCAACTGTaGAACAGAAGCCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: WSSGRTQVPNPAPKWWLTNPLQL*NRSLAL
Trigger: TAGTGCCAGGCTTCTGTTGCACAGTTGGAGTGGATT...CGTGAGCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR GCA 90 bp CCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTAATCCACTCCAACTGTaGAACAGAAGCCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: PHSQTLTHSHGQSVPPPANPLQL*NRSLAL
Trigger: TAGTGCCAGGCTTCTGTTGCACAGTTGGAGTGGATT...AGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGCAAAGGTCTGGTTGTTaGCTCTATCCATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LTHSHGQSVPPPASGTGLQRSGC*LYPWAG
Trigger: GCCAGCCCATGGATAGAGGCAACAACCAGACCTTTG...CAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTGGAGCTGTGTCTGCTTaGATAAGAGGCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: HGQSVPPPASGTGLARFGGAVSA*IRGWPA
Trigger: AGCCGGCCAGCCTCTTATGCAAGCAGACACAGCTCC...ACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTCATGGTAGTAACAGCTaGACCATTCCAGCCGGTCCG +
Preference number: 4 (lower is better)
Translates to: TDSLPRTICASPCFRDRIHGSNS*TIPAGP
Trigger: CGGACCGGCTGGAATGGTGCAGCTGTTACTACCATG...AATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTAAGCTATCGAACAGGTaGTCGCTGCCCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TDSLPRTICASPCFRDRIKLSNR*SLPSLS
Trigger: GCTCAAGGAGGGCAGCGAGCACCTGTTCGATAGCTT...AATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTCTGCTGACTTCATACTaGTGCAGGTGGGGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: TDSLPRTICASPCFRDRILLTSY*CRWGLG
Trigger: CCCTAACCCCCACCTGCACCAGTATGAAGTCAGCAG...AATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp ACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAGATGGCCTCTCCAGATaGGCCTACAGGAAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: THSHGQSVPPPASGTGLADGLSR*AYRKSV
Trigger: CACACTTTTCCTGTAGGCCCATCTGGAGAGGCCATC...TGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGACTGCTCAATGGGGGTaGGACTGTGGTGTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LTHSHGQSVPPPASGTGLTAQWG*DCGVGF
Trigger: AAACCCAACACCACAGTCCCACCCCCATTGAGCAGT...CAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTGCCTACCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCTCTGCAAGCCTTTCATaGCAGTCCCCTTCCGAATCA +
Preference number: 4 (lower is better)
Translates to: LPTPLPDTDSLPRTICASSASLS*QSPSES
Trigger: TGATTCGGAAGGGGACTGCCATGAAAGGCTTGCAGA...GGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCTCGAGGGATGCTTCATaGCTTCCAGAATCTCCACCA +
Preference number: 4 (lower is better)
Translates to: DSLPRTICASPCFRDRIGSRDAS*LPESPP
Trigger: TGGTGGAGATTCTGGAAGCCATGAAGCATCCCTCGA...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TTCCTGGAGAGAAGAGAAACAAGGAAGGCTGGACCTGGAGTTGTACATAGGGCCCCCATCGCCTGCGTCTaGACCCCCTCCACGTTGTTC +
Preference number: 4 (lower is better)
Translates to: FLERRETRKAGPGVVHRAPIACV*TPSTLF
Trigger: GAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGG...GGCCCTATGTACAACTCCAGGTCCAGCCTTCCTTGTTTCTCTTCTCTCCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp CCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAAACCACTTGCGTTaGAAGCTGGCAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: PHSQTLTHSHGQSVPPPASNHLR*KLAKSS
Trigger: GGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGA...AGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTAACAGCGCAGCTGCCTaGCTCCGTCCTCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: GWRDGSEVKSTDCSPRGPNSAAA*LRPPKL
Trigger: AAGTTTTGGAGGACGGAGCCAGGCAGCTGCGCTGTT...AGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACCTCTGAGCCATCTCTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp AACAGCTGCTGTGACCACAGAGGAGGCTGGCATGGAACCCTGAACATACCCATCTGCTGGGCTGTCATTTaGACACCCTCCTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: NSCCDHRGGWHGTLNIPICWAVI*TPSSSL
Trigger: GAGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCA...GATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTGGTCACAGCAGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTATCACCACAGACATCTaGCCAGTTCGGTCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: PHSQTLTHSHGQSVPPPAITTDI*PVRSKF
Trigger: AAACTTTGACCGAACTGGGCAGATGTCTGTGGTGAT...AGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACACCTACAGGAAAAGTGTaGATCCAGCGCCTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTPTGKV*IQRLLL
Trigger: CAACAGAAGGCGCTGGATGCACACTTTTCCTGTAGG...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGCTGCCCTGCAGCTCTaGCATGTTTTGCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRAALQL*HVLPGL
Trigger: CAGACCCGGCAAAACATGGCAGAGCTGCAGGGCAGC...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGGGTCCCTCTGCCTGCTaGCCTGCAGCTCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLGPSAC*PAALPC
Trigger: ACATGGCAGAGCTGCAGGGCAGCAGGCAGAGGGACC...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATAGGTCCCTCTGCCTGCTaGCCTGCAGCTCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: FTHTCAEAKYQQWPHSLIGPSAC*PAALPC
Trigger: ACATGGCAGAGCTGCAGGGCAGCAGGCAGAGGGACC...TATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGGGTAGGGTCCCTCTaGCTGCTGCCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHWVGSL*LLPCSS
Trigger: AGAGCTGCAGGGCAGCAGGCAGAGGGACCCTACCCA...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGAGTGACCTCAAAATCACAGCATGGCGGGAAGTGCTGTaGCTCCCGGCAGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: AWDSVLLCVSWSDLKITAWREVL*LPAASW
Trigger: CCATGAAGCTGCCGGGAGGCACAGCACTTCCCGCCA...TGCTGTGATTTTGAGGTCACTCCAGGACACACACAGTAAGACACTGTCCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGTGGCGGGAAGTGCTGTaGCTCCCGGCAGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLWREVL*LPAASW
Trigger: CCATGAAGCTGCCGGGAGGCACAGCACTTCCCGCCA...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TCCGTGAAGTCCTTCAGCAGCCGATCAGCAAACTTCTCGTCCCCTGTGGCACTACCGTGCACAGTCGTCTaGTGTTCTCCTAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SVKSFSSRSANFSSPVALPCTVV*CSPRLF
Trigger: GAAGAGCCTAGGAGAACAGCAGACGACTGTGCACGG...TAGTGCCACAGGGGACGAGAAGTTTGCTGATCGGCTGCTGAAGGACTTCACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp TACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACTGGCATGCAGGCAGATGATGCTGTaGGTGGGCTGCGGACAAACT +
Preference number: 4 (lower is better)
Translates to: YPQPLLREAAWLHGALACRQMML*VGCGQT
Trigger: AGTTTGTCCGCAGCCCACGCACAGCATCATCTGCCT...GCATGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp TCAAAGCTATCGAACAGGTGCTCGCTGCCCTCCTTGAGCAAGCAGCTGAGGTTGAGGCAGATGATGCTGTaGGTGGGCTGCGGACAAACT +
Preference number: 4 (lower is better)
Translates to: SKLSNRCSLPSLSKQLRLRQMML*VGCGQT
Trigger: AGTTTGTCCGCAGCCCACGCACAGCATCATCTGCCT...CAACCTCAGCTGCTTGCTCAAGGAGGGCAGCGAGCACCTGTTCGATAGCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGCTTCACCAGATGCATaGGTTATGAGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTASPDA*VMSCSS
Trigger: GGAAGAGCAGCTCATAACGCATGCATCTGGTGAAGC...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACACATGGAGCACTGGCATaGATCTTCTCCAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTHGALA*IFSRQF
Trigger: AAACTGCCTGGAGAAGATGCATGCCAGTGCTCCATG...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGGGACATCTCGGGTGCTaGTGTAGCCCAGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVEGHLGC*CSPVSC
Trigger: GCAGCTCACTGGGCTACACCAGCACCCGAGATGTCC...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAAGCTCTGCAGAGGAGTaGGTAGGGTCCCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRSSAEE*VGSLCL
Trigger: CAGGCAGAGGGACCCTACCCACTCCTCTGCAGAGCT...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAATGCTGTCACCAGGCTaGCGGGAAGTGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRMLSPG*REVLCL
Trigger: GAGGCACAGCACTTCCCGCCAGCCTGGTGACAGCAT...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTACTGCTCAATGGGGGTaGGACTGTGGTGTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TDSLPRTICASPCFRDRITAQWG*DCGVGF
Trigger: AAACCCAACACCACAGTCCCACCCCCATTGAGCAGT...AATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATGCCTCTGCTATAGAGTaGGCTACTGCTCAATGGGGG +
Preference number: 4 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNASAIE*ATAQWG
Trigger: CCCCCATTGAGCAGTAGCCCACTCTATAGCAGAGGC...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACTGGCATGCTGTTCAGACAGCAGCTaGACTCCTGTCGAGGGATGC +
Preference number: 4 (lower is better)
Translates to: YPQPLLREAAWLHGALACCSDSS*TPVEGC
Trigger: GCATCCCTCGACAGGAGTCCAGCTGCTGTCTGAACA...GCATGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR CCA 90 bp TACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACTGGCATGCAACAGCGCAGCTGCCTaGCTCCGTCCTCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: YPQPLLREAAWLHGALACNSAAA*LRPPKL
Trigger: AAGTTTTGGAGGACGGAGCCAGGCAGCTGCGCTGTT...GCATGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR CCA 90 bp CCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCACAGAACATGTTTTaGTTGGTGGAGCTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: PHSQTLTHSHGQSVPPPASQNMF*LVELVE
Trigger: CTCTACCAGCTCCACCAACCAAAACATGTTCTGTGA...AGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCTCACGCAAACCTGTGTGCAATaGCTTCCTGGAAAAGATGCA +
Preference number: 4 (lower is better)
Translates to: WSSGRTQVPNPAPKWWLTQTCVQ*LPGKDA
Trigger: TGCATCTTTTCCAGGAAGCCATTGCACACAGGTTTG...CGTGAGCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119705.8
3UTR CAA 72 bp TCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTaGGCGGTAGCGGCAGCAGCTGCTTCCAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: SPCFRDRIGKIW*AVAAAAASNLS
Trigger: AGAAAGATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp CTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGCACCAGCCTGTGCCCTaGTGCCAGCAAATTCCACTT +
Preference number: 4 (lower is better)
Translates to: LFTHTCAEAKYQQWPHSLHQPVP*CQQIPL
Trigger: AAGTGGAATTTGCTGGCATCAGGGCACAGGCTGGTG...CAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGCACTTTTGCGACTGTaGTTCTCCTGTTCTCTCACA +
Preference number: 4 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTALLRL*FSCSLT
Trigger: TGTGAGAGAACAGGAGAATCACAGTCGCAAAAGTGC...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp GAGAGAAGAGAAACAAGGAAGGCTGGACCTGGAGTTGTACATAGGGCCCAGGAGGCTGGTGTAGCCCAGTaGGCTGCTGACTTCATACTG +
Preference number: 4 (lower is better)
Translates to: ERRETRKAGPGVVHRAQEAGVAQ*AADFIL
Trigger: CAGTATGAAGTCAGCAGCTCACTGGGCTACACCAGC...CTCCTGGGCCCTATGTACAACTCCAGGTCCAGCCTTCCTTGTTTCTCTTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATTTAATCAGCGCTCTCTaGGGCGTGTATCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNLISAL*GVYPPG
Trigger: ACCTGGAGGATACACGCCTCAGAGAGCGCTGATTAA...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
CDS-3UTR TCA 90 bp TACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACTGGCATGCTTAATCAGCGCTCTCTaGGGCGTGTATCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: YPQPLLREAAWLHGALACLISAL*GVYPPG
Trigger: ACCTGGAGGATACACGCCTCAGAGAGCGCTGATTAA...GCATGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR TCA 90 bp CCAGAACGTGACCAGTCGGTTGTCACGGTTGATGCAGAAATCCGTGAAGTCCTTGCCTTCTGTTGGAGGTaGGCTTCATGGGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: PERDQSVVTVDAEIREVLAFCWR*ASWASS
Trigger: CGAGGATGCCCATGAAGCTCACCTCCAACAGAAGGC...AAGGACTTCACGGATTTCTGCATCAACCGTGACAACCGACTGGTCACGTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR TCA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGGAAGTAGTCAGTGGTaGGGGGAAGGCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTGSSQW*GEGMQE
Trigger: CTCCTGCATGCCTTCCCCTCACCACTGACTACTTCC...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp CACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTCTCCTAGGCTCTTCTaGCTAGCTTCCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HGQSVPPPASGTGLARFGSPRLF*LASISS
Trigger: GCTGGAGATGGAAGCTAGTCAGAAGAGCCTAGGAGA...ACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp AGGCCAGCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATTCTCCTAGGCTCTTCTaGCTAGCTTCCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RPAPAYPQPLLREAAWLHSPRLF*LASISS
Trigger: GCTGGAGATGGAAGCTAGTCAGAAGAGCCTAGGAGA...ATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGCTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR TCA 90 bp CCATTCCAGCCGGTCCGTTCGGTTGTTCACATCAACATCCAGGGTCACAGTCCTGATGAAGCAGCACGGTaGAAGGCCCTTCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PFQPVRSVVHINIQGHSPDEAAR*KALLFR
Trigger: TCTGAACAGAAGGGCCTTTCACCGTGCTGCTTCATC...AGGACTGTGACCCTGGATGTTGATGTGAACAACCGAACGGACCGGCTGGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp GCCCGATGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTCTAGCTCATCATCACTaGCCCCAAAGCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ARCKRRSEEGVESPGTPGLAHHH*PQSPSC
Trigger: ACAAGAAGGGCTTTGGGGGCAGTGATGATGAGCTAG...ACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCATCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCGTTCTCTCACAGACCTaGAGGTGGCGAGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSVLSQT*RWRGAE
Trigger: CTCAGCGCCTCGCCACCTGCAGGTCTGTGAGAGAAC...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTTCCTCAGTGGGCAGTaGACGGCTTGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSFLSGQ*TAWQGR
Trigger: CCTTCCCTGCCAAGCCGTGCACTGCCCACTGAGGAA...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp GCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCATCATCAGGATGTTGGTaGTCTTGCCCAGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: APAYPQPLLREAAWLHGASSGCW*SCPGSC
Trigger: ACAGCTCCCTGGGCAAGAGCACCAACATCCTGATGA...TGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR GCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTCTGACTTCATACTGGTaGAGGTGGGGGTTAGGGATC +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFLTSYW*RWGLGI
Trigger: GATCCCTAACCCCCACCTGCACCAGTATGAAGTCAG...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp AAACAAGGAAGGCTGGACCTGGAGTTGTACATAGGGCCCAGGAGAGGTAAAGAAGCTGCCCTGCAGCTCTaGCATGTTTTGCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KQGRLDLELYIGPRRGKEAALQL*HVLPGL
Trigger: CAGACCCGGCAAAACATGGCAGAGCTGCAGGGCAGC...TTCTTTACCTCTCCTGGGCCCTATGTACAACTCCAGGTCCAGCCTTCCTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGGCTGCCCTGCAGCTCTaGCATGTTTTGCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLAALQL*HVLPGL
Trigger: CAGACCCGGCAAAACATGGCAGAGCTGCAGGGCAGC...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACGCTGCCCTGCAGCTCTaGCATGTTTTGCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHAALQL*HVLPGL
Trigger: CAGACCCGGCAAAACATGGCAGAGCTGCAGGGCAGC...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CCTCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTGCGTGGGTAGGGTCCCTCTaGCTGCTGCCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PQNHSNLLPSPLVFSSAAWVGSL*LLPCSS
Trigger: AGAGCTGCAGGGCAGCAGGCAGAGGGACCCTACCCA...CGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGGGCAGCTTCATGGTATaGCAACTCCAACAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RTICASPCFRDRIGKIWLGSFMV*QLQQLC
Trigger: GCAGAGCTGTTGGAGTTGGCATACCATGAAGCTGCC...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGACTGGAGGGCCTGCTaGCTCGAGAGAGTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNDWRAC*LERVCR
Trigger: TCTGCACACTCTCTCGAGGCAGCAGGCCCTCCAGTC...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCGACTGGAGGGCCTGCTaGCTCGAGAGAGTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSDWRAC*LERVCR
Trigger: TCTGCACACTCTCTCGAGGCAGCAGGCCCTCCAGTC...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACGACTGGAGGGCCTGCTaGCTCGAGAGAGTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHDWRAC*LERVCR
Trigger: TCTGCACACTCTCTCGAGGCAGCAGGCCCTCCAGTC...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCATGCGTTATGAGCTaGTCTTCCAGCATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LTHSHGQSVPPPASGTGLACVMS*SSSIFC
Trigger: GCAGAAAATGCTGGAAGAGCAGCTCATAACGCATGC...CAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAGCATGCGTTATGAGCTaGTCTTCCAGCATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: THSHGQSVPPPASGTGLAACVMS*SSSIFC
Trigger: GCAGAAAATGCTGGAAGAGCAGCTCATAACGCATGC...TGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AGGCCAGCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGATGAAGGTCCGCCATaGTTCACCAGATGCATGCGT +
Preference number: 4 (lower is better)
Translates to: RPAPAYPQPLLREAAWLHDEGPP*FTRCMR
Trigger: ACGCATGCATCTGGTGAAGCATGGCGGACCTTCATC...ATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGCTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR GCA 90 bp TCGATGCCAACCTTGGACCATCTCAAACAGCACTGTGGCAGTCACTGCCATCCAAAAGTCATCCGCTCCTaGTGTGTACCAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SMPTLDHLKQHCGSHCHPKVIRS*CVPGGR
Trigger: TCTGCCCCCTGGTACACAGCAGGAGCGGATGACTTT...TGGATGGCAGTGACTGCCACAGTGCTGTTTGAGATGGTCCAAGGTTGGCATCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp CACAGAGGAGGCTGGCATGGAACCCTGAACATACCCATCTGGGAAAACGAGAACAAGCTATCGAACAGGTaGTCGCTGCCCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: HRGGWHGTLNIPIWENENKLSNR*SLPSLS
Trigger: GCTCAAGGAGGGCAGCGAGCACCTGTTCGATAGCTT...GTTCTCGTTTTCCCAGATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp GCACTTGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCCAAGAGTCACATCCTTaGGGTCTACAACATTCACAT +
Preference number: 4 (lower is better)
Translates to: ALGALGGPRFPTQHPNGGQESHP*GLQHSH
Trigger: ATGTGAATGTTGTAGACCCCAAGGATGTGACTCTTG...GCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTCCTCACTTCCTCAGTaGGCAGTGCACGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVESSLPQ*AVHGLA
Trigger: TGCCAAGCCGTGCACTGCCCACTGAGGAAGTGAGGA...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp AGGCCAGCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATCTGTCATCAGAAGCCTaGCTCCTCACTTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RPAPAYPQPLLREAAWLHLSSEA*LLTSSV
Trigger: CACTGAGGAAGTGAGGAGCCAGGCTTCTGATGACAG...ATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGCTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR CCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTCTGTCATCAGAAGCCTaGCTCCTCACTTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFLSSEA*LLTSSV
Trigger: CACTGAGGAAGTGAGGAGCCAGGCTTCTGATGACAG...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACGGACATCTCGGGTGCTaGTGTAGCCCAGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHGHLGC*CSPVSC
Trigger: GCAGCTCACTGGGCTACACCAGCACCCGAGATGTCC...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp CTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGCACATGGAACCTTCCTaGTGCACTGGAGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LFTHTCAEAKYQQWPHSLHMEPS*CTGVPL
Trigger: CAGAGGGACTCCAGTGCACCAGGAAGGTTCCATGTG...CAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp TACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACTGGCATGCGATGGCCTCTCCAGATaGGCCTACAGGAAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: YPQPLLREAAWLHGALACDGLSR*AYRKSV
Trigger: CACACTTTTCCTGTAGGCCCATCTGGAGAGGCCATC...GCATGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR CCA 90 bp ACTGCAGGAACTGGAGCTCAAGGCCAGGAGCATCTCAGGACAGCTGATAGGCAAGATGGCCTCTCCAGATaGGCCTACAGGAAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: TAGTGAQGQEHLRTADRQDGLSR*AYRKSV
Trigger: CACACTTTTCCTGTAGGCCCATCTGGAGAGGCCATC...TTGCCTATCAGCTGTCCTGAGATGCTCCTGGCCTTGAGCTCCAGTTCCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp CACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTGATGATGGATCTGGATaGCCTCTCCAGATGGGCCTA +
Preference number: 4 (lower is better)
Translates to: HGQSVPPPASGTGLARFGDDGSG*PLQMGL
Trigger: TAGGCCCATCTGGAGAGGCCATCCAGATCCATCATC...ACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCAGCTCTGCAGAGGAGTaGGTAGGGTCCCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSSSAEE*VGSLCL
Trigger: CAGGCAGAGGGACCCTACCCACTCCTCTGCAGAGCT...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACAGCTCTGCAGAGGAGTaGGTAGGGTCCCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHSSAEE*VGSLCL
Trigger: CAGGCAGAGGGACCCTACCCACTCCTCTGCAGAGCT...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCATGCTGTCACCAGGCTaGCGGGAAGTGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSMLSPG*REVLCL
Trigger: GAGGCACAGCACTTCCCGCCAGCCTGGTGACAGCAT...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAGTGGTGTTGGGTTTCTaGGTCTTTGGCTGTACTATG +
Preference number: 4 (lower is better)
Translates to: THSHGQSVPPPASGTGLAVVLGF*VFGCTM
Trigger: CATAGTACAGCCAAAGACCCAGAAACCCAACACCAC...TGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTGTGGGACTGTGGTGTTaGGTTTCTGGGTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: HGQSVPPPASGTGLARFGVGLWC*VSGSLA
Trigger: AGCCAAAGACCCAGAAACCCAACACCACAGTCCCAC...ACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATGTGGGACTGTGGTGTTaGGTTTCTGGGTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNVGLWC*VSGSLA
Trigger: AGCCAAAGACCCAGAAACCCAACACCACAGTCCCAC...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TCTTCGGTCTTTGCCTTCCCTGAGCAGTCTAGAGCGAAAAGCACTCACTGGACGTGTTCAGACAGCAGCTaGACTCCTGTCGAGGGATGC +
Preference number: 4 (lower is better)
Translates to: SSVFAFPEQSRAKSTHWTCSDSS*TPVEGC
Trigger: GCATCCCTCGACAGGAGTCCAGCTGCTGTCTGAACA...CGTCCAGTGAGTGCTTTTCGCTCTAGACTGCTCAGGGAAGGCAAAGACCGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp CAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGACCCATCGCCTGCGTCTaGACCCCCTCCACGTTGTTC +
Preference number: 4 (lower is better)
Translates to: QIYLIHTLLGRKQEVLFRPIACV*TPSTLF
Trigger: GAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGG...TCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTAGGACCCTCCAAAACTaGGACCAGCAAGAAGCCACA +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFRTLQN*DQQEAT
Trigger: TGTGGCTTCTTGCTGGTCCCAGTTTTGGAGGGTCCT...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGCTTAGCCGGAATACTTaGGTCACAGTCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: RTICASPCFRDRIGKIWLLSRNT*VTVWST
Trigger: TGTGGACCAGACTGTGACTCAAGTATTCCGGCTAAG...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTCTTAGCCGGAATACTTaGGTCACAGTCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFLSRNT*VTVWST
Trigger: TGTGGACCAGACTGTGACTCAAGTATTCCGGCTAAG...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGACACCAGCCTGTGCCCTaGTGCCAGCAAATTCCACTT +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRHQPVP*CQQIPL
Trigger: AAGTGGAATTTGCTGGCATCAGGGCACAGGCTGGTG...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTAATGGTCACGAGGAGTaGAGTCCACTCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFNGHEE*SPLFPS
Trigger: AGAAGGGAAGAGTGGACTTCACTCCTCGTGACCATT...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp CACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTGCTTGGTCAAGATCATaGGTAGGCGGTCCACTTCAA +
Preference number: 4 (lower is better)
Translates to: HGQSVPPPASGTGLARFGAWSRS*VGGPLQ
Trigger: TTGAAGTGGACCGCCTACTCATGATCTTGACCAAGC...ACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp GCACTTGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCGTTTTATCCGTGGAGTaGAACTGTTACAAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ALGALGGPRFPTQHPNGGVLSVE*NCYKRA
Trigger: AGCTCTTTTGTAACAGTTTCACTCCACGGATAAAAC...GCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCATGGGCCAGGCAGCCTaGACACTTGAGCATCGTAGG +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSMGQAA*TLEHRR
Trigger: CCTACGATGCTCAAGTGTTCAGGCTGCCTGGCCCAT...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAAGCCCAGTGAGCTGCTaGCTTCATACTGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRSPVSC*LHTGAG
Trigger: ACCTGCACCAGTATGAAGTCAGCAGCTCACTGGGCT...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp TGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTATGGATAGCCCAGTGAGCTGCTaGCTTCATACTGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: CKRRSEEGVESPGTPGMDSPVSC*LHTGAG
Trigger: ACCTGCACCAGTATGAAGTCAGCAGCTCACTGGGCT...ATCCATACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGGCTGGTGTAGCCCAGTaGGCTGCTGACTTCATACTG +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVEAGVAQ*AADFIL
Trigger: CAGTATGAAGTCAGCAGCTCACTGGGCTACACCAGC...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp CCAGAACGTGACCAGTCGGTTGTCACGGTTGATGCAGAAATCCGTGAAGTCCTTGCTGGTGTAGCCCAGTaGGCTGCTGACTTCATACTG +
Preference number: 4 (lower is better)
Translates to: PERDQSVVTVDAEIREVLAGVAQ*AADFIL
Trigger: CAGTATGAAGTCAGCAGCTCACTGGGCTACACCAGC...AAGGACTTCACGGATTTCTGCATCAACCGTGACAACCGACTGGTCACGTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR TCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACGGAAGTAGTCAGTGGTaGGGGGAAGGCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHGSSQW*GEGMQE
Trigger: CTCCTGCATGCCTTCCCCTCACCACTGACTACTTCC...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGCTGGGCTGTCATTTaGACACCCTCCTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVECWAVI*TPSSSL
Trigger: GAGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCA...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp TCACGGTTGATGCAGAAATCCGTGAAGTCCTTCAGCAGCCGATCAGCAAACTTCCCGCCGCTGCTGCCCTaGAAACTTGCGTTTGGAGTA +
Preference number: 4 (lower is better)
Translates to: SRLMQKSVKSFSSRSANFPPLLP*KLAFGV
Trigger: TACTCCAAACGCAAGTTTTCAGGGCAGCAGCGGCGG...GAAGTTTGCTGATCGGCTGCTGAAGGACTTCACGGATTTCTGCATCAACCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR TCA 90 bp TTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATACCGCCGCTGCTGCCCTaGAAACTTGCGTTTGGAGTA +
Preference number: 4 (lower is better)
Translates to: FTHTCAEAKYQQWPHSLIPPLLP*KLAFGV
Trigger: TACTCCAAACGCAAGTTTTCAGGGCAGCAGCGGCGG...TATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACTGGCATGCCTAGCTCATCATCACTaGCCCCAAAGCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: YPQPLLREAAWLHGALACLAHHH*PQSPSC
Trigger: ACAAGAAGGGCTTTGGGGGCAGTGATGATGAGCTAG...GCATGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR GCA 90 bp GAGAGAAGAGAAACAAGGAAGGCTGGACCTGGAGTTGTACATAGGGCCCAGGAGGTGGCTGCTCTCCCATaGACACTAAGTCCACACCAA +
Preference number: 4 (lower is better)
Translates to: ERRETRKAGPGVVHRAQEVAALP*TLSPHQ
Trigger: TTGGTGTGGACTTAGTGTGCATGGGAGAGCAGCCAC...CTCCTGGGCCCTATGTACAACTCCAGGTCCAGCCTTCCTTGTTTCTCTTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTGTTCTCTCACAGACCTaGAGGTGGCGAGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGVLSQT*RWRGAE
Trigger: CTCAGCGCCTCGCCACCTGCAGGTCTGTGAGAGAAC...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp CCTCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTGCGGTTCTCTCACAGACCTaGAGGTGGCGAGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PQNHSNLLPSPLVFSSAAVLSQT*RWRGAE
Trigger: CTCAGCGCCTCGCCACCTGCAGGTCTGTGAGAGAAC...CGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTTTCCTCAGTGGGCAGTaGACGGCTTGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGFLSGQ*TAWQGR
Trigger: CCTTCCCTGCCAAGCCGTGCACTGCCCACTGAGGAA...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp CAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGATTCCTCAGTGGGCAGTaGACGGCTTGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QIYLIHTLLGRKQEVLFRFLSGQ*TAWQGR
Trigger: CCTTCCCTGCCAAGCCGTGCACTGCCCACTGAGGAA...TCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGGATGTTGGTGCTCTTaGCCAGGGAGCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRGCWCS*PGSCHQ
Trigger: CTGATGACAGCTCCCTGGGCAAGAGCACCAACATCC...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp CACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTCCTACAGGAAAAGTGTaGATCCAGCGCCTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: HGQSVPPPASGTGLARFGPTGKV*IQRLLL
Trigger: CAACAGAAGGCGCTGGATGCACACTTTTCCTGTAGG...ACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCGCTGCCCTGCAGCTCTaGCATGTTTTGCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PQIYLIHTLLGRKQEVLFAALQL*HVLPGL
Trigger: CAGACCCGGCAAAACATGGCAGAGCTGCAGGGCAGC...GAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGATGGGCCCGGTCATCTaGAAGCCTTTCATGGCAGTC +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVEMGPVI*KPFMAV
Trigger: GACTGCCATGAAAGGCTTGCAGATGACCGGGCCCAT...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp TTCCTGGAGAGAAGAGAAACAAGGAAGGCTGGACCTGGAGTTGTACATAGGGCCATGGGCCCGGTCATCTaGAAGCCTTTCATGGCAGTC +
Preference number: 4 (lower is better)
Translates to: FLERRETRKAGPGVVHRAMGPVI*KPFMAV
Trigger: GACTGCCATGAAAGGCTTGCAGATGACCGGGCCCAT...GGCCCTATGTACAACTCCAGGTCCAGCCTTCCTTGTTTCTCTTCTCTCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGGTAGTCACCAGAGTTTaGAGAGGGAAAGGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: RTICASPCFRDRIGKIWLVVTRV*RGKGLF
Trigger: GAACAGGCCTTTCCCTCTGCAAACTCTGGTGACTAC...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATGTAGTCACCAGAGTTTaGAGAGGGAAAGGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNVVTRV*RGKGLF
Trigger: GAACAGGCCTTTCCCTCTGCAAACTCTGGTGACTAC...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGCATGCGTTATGAGCTaGTCTTCCAGCATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: TDSLPRTICASPCFRDRIACVMS*SSSIFC
Trigger: GCAGAAAATGCTGGAAGAGCAGCTCATAACGCATGC...AATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATGCTTCACCAGATGCATaGGTTATGAGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNASPDA*VMSCSS
Trigger: GGAAGAGCAGCTCATAACGCATGCATCTGGTGAAGC...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATGTGCACAAGCTCTTCTaGCACAAAGGCCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNVHKLF*HKGHLK
Trigger: TTTGAGGTGGCCTTTGTGGCAGAAGAGCTTGTGCAC...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATGCAGGAATCTCAGAGTaGACAAGCTCTTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNAGISE*TSSSAT
Trigger: TGTGGCAGAAGAGCTTGTGCACTCTGAGATTCCTGC...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TCACGGTTGATGCAGAAATCCGTGAAGTCCTTCAGCAGCCGATCAGCAAACTTCGGAGCTGTGTCTGCTTaGATAAGAGGCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: SRLMQKSVKSFSSRSANFGAVSA*IRGWPA
Trigger: AGCCGGCCAGCCTCTTATGCAAGCAGACACAGCTCC...GAAGTTTGCTGATCGGCTGCTGAAGGACTTCACGGATTTCTGCATCAACCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp TTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATAGGAGCTGTGTCTGCTTaGATAAGAGGCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: FTHTCAEAKYQQWPHSLIGAVSA*IRGWPA
Trigger: AGCCGGCCAGCCTCTTATGCAAGCAGACACAGCTCC...TATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTAGGGTCACAGTCCTCTaGTCTGGGACAGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTRVTVL*SGTVAA
Trigger: AGCTGCTACTGTCCCAGAGCAGAGGACTGTGACCCT...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCGTCGCCGCCGCTGCTaGCCTGAAAACTTGCGTTTG +
Preference number: 4 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVRRRRC*PENLRL
Trigger: CAAACGCAAGTTTTCAGGGCAGCAGCGGCGGCGACG...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCACAGTCGCACCAACACTaGATACTGGATGAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: THSHGQSVPPPASGTGLAQSHQH*ILDEEF
Trigger: AAACTCTTCATCCAGTATCCAGTGTTGGTGCGACTG...TGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGTCCTCACTTCCTCAGTaGGCAGTGCACGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLSSLPQ*AVHGLA
Trigger: TGCCAAGCCGTGCACTGCCCACTGAGGAAGTGAGGA...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp GTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTGCCTATCCTCACTTCCTCAGTaGGCAGTGCACGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VPNIPLLVKEKDPNGSCLSSLPQ*AVHGLA
Trigger: TGCCAAGCCGTGCACTGCCCACTGAGGAAGTGAGGA...TAGGCAGCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGGATCATCAGGATGTTaGTGCTCTTGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRGSSGC*CSCPGS
Trigger: GCTCCCTGGGCAAGAGCACCAACATCCTGATGATCC...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGACTGCTGACTTCATACTaGTGCAGGTGGGGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRLLTSY*CRWGLG
Trigger: CCCTAACCCCCACCTGCACCAGTATGAAGTCAGCAG...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGCACATGGAACCTTCCTaGTGCACTGGAGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVEHMEPS*CTGVPL
Trigger: CAGAGGGACTCCAGTGCACCAGGAAGGTTCCATGTG...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTAGGGAGTCCTTGTTCTaGGTCCTAGGATTCACACCT +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFRESLF*VLGFTP
Trigger: AGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCT...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACTGCAGGAACTGGAGCTCAAGGCCAGGAGCATCTCAGGACAGCTGATAGGCAAACAGAAGCCTGGCATTaGGTCTGGAGAGGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: TAGTGAQGQEHLRTADRQTEAWH*VWRGRN
Trigger: GTTTCTACCTCTCCAGACCCAATGCCAGGCTTCTGT...TTGCCTATCAGCTGTCCTGAGATGCTCCTGGCCTTGAGCTCCAGTTCCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTCCCTGCATGAGACGCTaGCAGATGAACTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFPCMRR*QMNSSN
Trigger: GTTTGAAGAGTTCATCTGCCAGCGTCTCATGCAGGG...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACCCTGCATGAGACGCTaGCAGATGAACTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: APAYPQPLLREAAWLHGAPCMRR*QMNSSN
Trigger: GTTTGAAGAGTTCATCTGCCAGCGTCTCATGCAGGG...TGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR CCA 90 bp CTGCCTACCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCGGGTTTCTGGGTCTTTaGCTGTACTATGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: LPTPLPDTDSLPRTICASGFLGL*LYYDLV
Trigger: TACCAAATCATAGTACAGCCAAAGACCCAGAAACCC...GGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp AGCACTGGCATGCATCTTCTCCAGGCAGTTTGTCCAGAACGTGACCAGTCGGTTGTGGGACTGTGGTGTTaGGTTTCTGGGTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: STGMHLLQAVCPERDQSVVGLWC*VSGSLA
Trigger: AGCCAAAGACCCAGAAACCCAACACCACAGTCCCAC...AACCGACTGGTCACGTTCTGGACAAACTGCCTGGAGAAGATGCATGCCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR CCA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGCCTCTGCTATAGAGTaGGCTACTGCTCAATGGGGG +
Preference number: 4 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTASAIE*ATAQWG
Trigger: CCCCCATTGAGCAGTAGCCCACTCTATAGCAGAGGC...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTTCCTTTCTTGCCGACTaGAGGGCCTGCTGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGSFLAD*RACCLE
Trigger: CTCGAGGCAGCAGGCCCTCCAGTCGGCAAGAAAGGA...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp CAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGATCCTTTCTTGCCGACTaGAGGGCCTGCTGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: QIYLIHTLLGRKQEVLFRSFLAD*RACCLE
Trigger: CTCGAGGCAGCAGGCCCTCCAGTCGGCAAGAAAGGA...TCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTTCCTTTCTTGCCGACTaGAGGGCCTGCTGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVSFLAD*RACCLE
Trigger: CTCGAGGCAGCAGGCCCTCCAGTCGGCAAGAAAGGA...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CCATTCCAGCCGGTCCGTTCGGTTGTTCACATCAACATCCAGGGTCACAGTCCTCATAGGTGGGAGTCATaGCAACACTGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PFQPVRSVVHINIQGHSPHRWES*QHCCSQ
Trigger: CTGAGAACAGCAGTGTTGCCATGACTCCCACCTATG...AGGACTGTGACCCTGGATGTTGATGTGAACAACCGAACGGACCGGCTGGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR CCA 90 bp CACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTGCCTGTTCTATGTTCTaGGAGTTCCCAAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HGQSVPPPASGTGLARFGACSMF*EFPKVW
Trigger: CCAGACCTTTGGGAACTCCCAGAACATAGAACAGGC...ACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGCCTGTTCTATGTTCTaGGAGTTCCCAAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFACSMF*EFPKVW
Trigger: CCAGACCTTTGGGAACTCCCAGAACATAGAACAGGC...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACTGGCATGCTCGAGGGATGCTTCATaGCTTCCAGAATCTCCACCA +
Preference number: 4 (lower is better)
Translates to: YPQPLLREAAWLHGALACSRDAS*LPESPP
Trigger: TGGTGGAGATTCTGGAAGCCATGAAGCATCCCTCGA...GCATGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR CCA 90 bp TCAAAGCTATCGAACAGGTGCTCGCTGCCCTCCTTGAGCAAGCAGCTGAGGTTGTCGAGGGATGCTTCATaGCTTCCAGAATCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SKLSNRCSLPSLSKQLRLSRDAS*LPESPP
Trigger: TGGTGGAGATTCTGGAAGCCATGAAGCATCCCTCGA...CAACCTCAGCTGCTTGCTCAAGGAGGGCAGCGAGCACCTGTTCGATAGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR CCA 90 bp CTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGACTTGCGTTGGAAGCTaGCAAAGTCATCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LFTHTCAEAKYQQWPHSLTCVGS*QSHPLL
Trigger: CAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGT...CAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CCAGAACGTGACCAGTCGGTTGTCACGGTTGATGCAGAAATCCGTGAAGTCCTTAACAGCGCAGCTGCCTaGCTCCGTCCTCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: PERDQSVVTVDAEIREVLNSAAA*LRPPKL
Trigger: AAGTTTTGGAGGACGGAGCCAGGCAGCTGCGCTGTT...AAGGACTTCACGGATTTCTGCATCAACCGTGACAACCGACTGGTCACGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR CCA 90 bp CAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAAGCGGGATGAAGAGCTaGGCCCTCAGGGGATCACCA +
Preference number: 4 (lower is better)
Translates to: QIYLIHTLLGRKQEVLFRSGMKS*ALRGSP
Trigger: TGGTGATCCCCTGAGGGCCCAGCTCTTCATCCCGCT...TCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGTGTGCAATGGCTTCCTaGAAAAGATGCATTCGATCC +
Preference number: 4 (lower is better)
Translates to: LTHSHGQSVPPPASGTGLCAMAS*KRCIRS
Trigger: GGATCGAATGCATCTTTTCCAGGAAGCCATTGCACA...CAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACATGTGCAATGGCTTCCTaGAAAAGATGCATTCGATCC +
Preference number: 4 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTCAMAS*KRCIRS
Trigger: GGATCGAATGCATCTTTTCCAGGAAGCCATTGCACA...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CATCCCTCCTGTCCATGTCTGCTTCTGGGAGGAGATCATAGCAGCCCTCTGTGTTCATTCTGCAGGCCTTaGGTCTGGAGAGGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: HPSCPCLLLGGDHSSPLCSFCRP*VWRGRN
Trigger: GTTTCTACCTCTCCAGACCCAAGGCCTGCAGAATGA...ACACAGAGGGCTGCTATGATCTCCTCCCAGAAGCAGACATGGACAGGAGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238200.2
3UTR CAA 72 bp CAGTTTGTCCAGAACGTGACCAGTCGGTTGTCACGGTaGATGCAGAAATCCGTGAAGTCCTTCAGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: QFVQNVTSRLSR*MQKSVKSFSSR
Trigger: TCGGCTGCTGAAGGACTTCACGGATTTCTGCATCAACCGTGACAACCGACTGGTCACGTTCTGGACAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
3UTR CAA 72 bp GCAGCAGCTGCTTCCAATCTTTCTCTTCACTCACACTaGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: AAAASNLSLHSH*CRGQISAVAPL
Trigger: GAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAGCTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR CAA 72 bp CAAGAAGCCACAGGAGGTAGCTTTTCGATGCCAACCTaGGACCATCTCAAACAGCACTGTGGCAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: QEATGGSFSMPT*DHLKQHCGSHC
Trigger: GCAGTGACTGCCACAGTGCTGTTTGAGATGGTCCAAGGTTGGCATCGAAAAGCTACCTCCTGTGGCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR TCA 90 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTAGCCCTTCTTGTGGATaGCAAGTTTGTAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: TDSLPRTICASPCFRDRISPSCG*QVCRPL
Trigger: CAAAGGTCTACAAACTTGTCATCCACAAGAAGGGCT...AATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp TTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATACACCAGCCTGTGCCCTaGTGCCAGCAAATTCCACTT +
Preference number: 4 (lower is better)
Translates to: FTHTCAEAKYQQWPHSLIHQPVP*CQQIPL
Trigger: AAGTGGAATTTGCTGGCATCAGGGCACAGGCTGGTG...TATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTATGGGCCAGGCAGCCTaGACACTTGAGCATCGTAGG +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGMGQAA*TLEHRR
Trigger: CCTACGATGCTCAAGTGTTCAGGCTGCCTGGCCCAT...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTGCCTTCTGTTGGAGGTaGGCTTCATGGGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGAFCWR*ASWASS
Trigger: CGAGGATGCCCATGAAGCTCACCTCCAACAGAAGGC...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTGCCTTCTGTTGGAGGTaGGCTTCATGGGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVAFCWR*ASWASS
Trigger: CGAGGATGCCCATGAAGCTCACCTCCAACAGAAGGC...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGGCCTTCTGTTGGAGGTaGGCTTCATGGGCATCCTCG +
Preference number: 4 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPAFCWR*ASWASS
Trigger: CGAGGATGCCCATGAAGCTCACCTCCAACAGAAGGC...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTGGAAGTAGTCAGTGGTaGGGGGAAGGCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGGSSQW*GEGMQE
Trigger: CTCCTGCATGCCTTCCCCTCACCACTGACTACTTCC...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp GCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGAGTGACCTCAAAATCACAGCATGCTGGGCTGTCATTTaGACACCCTCCTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: AWDSVLLCVSWSDLKITACWAVI*TPSSSL
Trigger: GAGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCA...TGCTGTGATTTTGAGGTCACTCCAGGACACACACAGTAAGACACTGTCCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTGCTGGGCTGTCATTTaGACACCCTCCTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSCWAVI*TPSSSL
Trigger: GAGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCA...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTTCTCAAAGGCGGCATTaGGAGAGAAGTTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFSQRRH*ERSFHG
Trigger: ACCATGGAAACTTCTCTCTCAATGCCGCCTTTGAGA...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTAGTTTGTCCAGAACGTaGCCAGTCGGTTGTCACGGT +
Preference number: 4 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTSLSRT*PVGCHG
Trigger: ACCGTGACAACCGACTGGTCACGTTCTGGACAAACT...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCTTAAGCGACTTGACTTaGAAAAGCAAAGGACTGTAC +
Preference number: 4 (lower is better)
Translates to: DSLPRTICASPCFRDRIGLSDLT*KSKGLY
Trigger: GTACAGTCCTTTGCTTTTGCAAGTCAAGTCGCTTAA...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTAGGAGCTTGCACTTTTaGGACTGTGATTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: TDSLPRTICASPCFRDRIRSLHF*DCDSPV
Trigger: AACAGGAGAATCACAGTCGCAAAAGTGCAAGCTCCT...AATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp GAGCTTCTTACTATACTGTACTGTACTGTCTGCTCAGTAGTCCTGTCCTGTCCATTCCTCAGTGGGCAGTaGACGGCTTGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ELLTILYCTVCSVVLSCPFLSGQ*TAWQGR
Trigger: CCTTCCCTGCCAAGCCGTGCACTGCCCACTGAGGAA...TGGACAGGACAGGACTACTGAGCAGACAGTACAGTACAGTATAGTAAGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTCTCTGCCTGCTGCCCTaGAGCTCTGCCATGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGLCLLP*SSAMFC
Trigger: GCAAAACATGGCAGAGCTGCAGGGCAGCAGGCAGAG...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp CCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCTCTGCCTGCTGCCCTaGAGCTCTGCCATGTTTTGC +
Preference number: 4 (lower is better)
Translates to: PQIYLIHTLLGRKQEVLFLCLLP*SSAMFC
Trigger: GCAAAACATGGCAGAGCTGCAGGGCAGCAGGCAGAG...GAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCGGTCCCTCTGCCTGCTaGCCTGCAGCTCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: HICTAGVSQWYIMPQIYLGPSAC*PAALPC
Trigger: ACATGGCAGAGCTGCAGGGCAGCAGGCAGAGGGACC...GAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTATGGATTATAGAGTGGGCTACTaGTCAATGGGGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: CKRRSEEGVESPGTPGMDYRVGY*SMGVGL
Trigger: CAGTCCCACCCCCATTGAGCAGTAGCCCACTCTATA...ATCCATACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCATGGGCCCGGTCATCTaGAAGCCTTTCATGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSMGPVI*KPFMAV
Trigger: GACTGCCATGAAAGGCTTGCAGATGACCGGGCCCAT...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATCCGTGCACAGTCGTCTaGTGTTCTCCTAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNPCTVV*CSPRLF
Trigger: GAAGAGCCTAGGAGAACAGCAGACGACTGTGCACGG...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGGAGTCATGGCAACACTaGTGTTCTCAGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVEESWQH*CSQLAE
Trigger: CTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTC...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGAATCCACTCCAACTGTaGAACAGAAGCCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: RTICASPCFRDRIGKIWLNPLQL*NRSLAL
Trigger: TAGTGCCAGGCTTCTGTTGCACAGTTGGAGTGGATT...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACATCTTCCAGCATTTTCTaGATGATGTCTATGCCCATC +
Preference number: 4 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTSSSIF*MMSMPI
Trigger: GATGGGCATAGACATCATGCAGAAAATGCTGGAAGA...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACAAAGTCATCCGCTCCTaGTGTGTACCAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHKVIRS*CVPGGR
Trigger: TCTGCCCCCTGGTACACAGCAGGAGCGGATGACTTT...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTAAAGTCATCCGCTCCTaGTGTGTACCAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTAKVIRS*CVPGGR
Trigger: TCTGCCCCCTGGTACACAGCAGGAGCGGATGACTTT...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTCCCAGAGGTCCTGAGTTCAAATCCCAGCAAGCACATGGTGGCTCAGAACCATGCAGGAATCTCAGAGTaGACAAGCTCTTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LPEVLSSNPSKHMVAQNHAGISE*TSSSAT
Trigger: TGTGGCAGAAGAGCTTGTGCACTCTGAGATTCCTGC...ATGGTTCTGAGCCACCATGTGCTTGCTGGGATTTGAACTCAGGACCTCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp TCACGGTTGATGCAGAAATCCGTGAAGTCCTTCAGCAGCCGATCAGCAAACTTCAGGGTCACAGTCCTCTaGTCTGGGACAGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SRLMQKSVKSFSSRSANFRVTVL*SGTVAA
Trigger: AGCTGCTACTGTCCCAGAGCAGAGGACTGTGACCCT...GAAGTTTGCTGATCGGCTGCTGAAGGACTTCACGGATTTCTGCATCAACCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR GCA 90 bp CTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGCATGGAGCACTGGCATaGATCTTCTCCAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LFTHTCAEAKYQQWPHSLHGALA*IFSRQF
Trigger: AAACTGCCTGGAGAAGATGCATGCCAGTGCTCCATG...CAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTCAGTCGCACCAACACTaGATACTGGATGAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: GWRDGSEVKSTDCSPRGPQSHQH*ILDEEF
Trigger: AAACTCTTCATCCAGTATCCAGTGTTGGTGCGACTG...AGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACCTCTGAGCCATCTCTCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGACTGTCATCAGAAGCCTaGCTCCTCACTTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRLSSEA*LLTSSV
Trigger: CACTGAGGAAGTGAGGAGCCAGGCTTCTGATGACAG...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp TTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATACTGCTGACTTCATACTaGTGCAGGTGGGGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: FTHTCAEAKYQQWPHSLILLTSY*CRWGLG
Trigger: CCCTAACCCCCACCTGCACCAGTATGAAGTCAGCAG...TATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGATGATGGATCTGGATaGCCTCTCCAGATGGGCCTA +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRDDGSG*PLQMGL
Trigger: TAGGCCCATCTGGAGAGGCCATCCAGATCCATCATC...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp TGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTATGGATGATGATGGATCTGGATaGCCTCTCCAGATGGGCCTA +
Preference number: 4 (lower is better)
Translates to: CKRRSEEGVESPGTPGMDDDGSG*PLQMGL
Trigger: TAGGCCCATCTGGAGAGGCCATCCAGATCCATCATC...ATCCATACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGCCTGGCATTGGGTCTaGAGAGGTAGAAACACTGTC +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRAWHWV*RGRNTV
Trigger: GACAGTGTTTCTACCTCTCCAGACCCAATGCCAGGC...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGATGTGCAACAGAAGCCTaGCATTGGGTCTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRCATEA*HWVWRG
Trigger: ACCTCTCCAGACCCAATGCCAGGCTTCTGTTGCACA...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGGTGGGACTGTGGTGTTaGGTTTCTGGGTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVEVGLWC*VSGSLA
Trigger: AGCCAAAGACCCAGAAACCCAACACCACAGTCCCAC...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGACTGCTCAATGGGGGTaGGACTGTGGTGTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVETAQWG*DCGVGF
Trigger: AAACCCAACACCACAGTCCCACCCCCATTGAGCAGT...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp TCAGAGGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTGAGTTCAAATCCCAGACTGCTCAATGGGGGTaGGACTGTGGTGTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SEVKSTDCSPRGPEFKSQTAQWG*DCGVGF
Trigger: AAACCCAACACCACAGTCCCACCCCCATTGAGCAGT...CTGGGATTTGAACTCAGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGCCTCTGCTATAGAGTaGGCTACTGCTCAATGGGGG +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNASAIE*ATAQWG
Trigger: CCCCCATTGAGCAGTAGCCCACTCTATAGCAGAGGC...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCGCCTCTGCTATAGAGTaGGCTACTGCTCAATGGGGG +
Preference number: 4 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPASAIE*ATAQWG
Trigger: CCCCCATTGAGCAGTAGCCCACTCTATAGCAGAGGC...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCTTGAGTGTCACCTTATaGAAAGTTCTGCCCATACTT +
Preference number: 4 (lower is better)
Translates to: DSLPRTICASPCFRDRIGLSVTL*KVLPIL
Trigger: AAGTATGGGCAGAACTTTCCATAAGGTGACACTCAA...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTGCCTAGGCTGTCCACATAGGTaGGAGTCATGGCAACACTGC +
Preference number: 4 (lower is better)
Translates to: VPNIPLLVKEKDPNGSCLGCPHR*ESWQHC
Trigger: GCAGTGTTGCCATGACTCCCACCTATGTGGACAGCC...TAGGCAGCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGTGTTCAGACAGCAGCTaGACTCCTGTCGAGGGATGC +
Preference number: 4 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLCSDSS*TPVEGC
Trigger: GCATCCCTCGACAGGAGTCCAGCTGCTGTCTGAACA...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTATGGATAGGACCCTCCAAAACTaGGACCAGCAAGAAGCCACA +
Preference number: 4 (lower is better)
Translates to: CKRRSEEGVESPGTPGMDRTLQN*DQQEAT
Trigger: TGTGGCTTCTTGCTGGTCCCAGTTTTGGAGGGTCCT...ATCCATACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp TGTTTGTGTGTGCTTATTTGCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGAGAGCGGGATGAAGAGCTaGGCCCTCAGGGGATCACCA +
Preference number: 4 (lower is better)
Translates to: CLCVLICLGQCLTVCVLESGMKS*ALRGSP
Trigger: TGGTGATCCCCTGAGGGCCCAGCTCTTCATCCCGCT...CTCCAGGACACACACAGTAAGACACTGTCCCAAGCAAATAAGCACACACAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCAGCGGGATGAAGAGCTaGGCCCTCAGGGGATCACCA +
Preference number: 4 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGSGMKS*ALRGSP
Trigger: TGGTGATCCCCTGAGGGCCCAGCTCTTCATCCCGCT...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGACATGGATATACTGTaGCTTATTCTCAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LTHSHGQSVPPPASGTGLDMDIL*LILSRE
Trigger: TTCCCTGCTGAGAATAAGCCACAGTATATCCATGTC...CAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGACTTAGCCGGAATACTTaGGTCACAGTCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRLSRNT*VTVWST
Trigger: TGTGGACCAGACTGTGACTCAAGTATTCCGGCTAAG...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGTAGTTTCCTTGTGCTaGGGTAGAATTGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFVVSLC*GRIVSL
Trigger: CAAGGAGACAATTCTACCTCAGCACAAGGAAACTAC...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp ACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAGTTTTATCCGTGGAGTaGAACTGTTACAAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: THSHGQSVPPPASGTGLAVLSVE*NCYKRA
Trigger: AGCTCTTTTGTAACAGTTTCACTCCACGGATAAAAC...TGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp ACTGTACTGTACTGTCTGCTCAGTAGTCCTGTCCTGTCCAGAAGATCCTTGTTCAGCCCAGTGAGCTGCTaGCTTCATACTGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TVLYCLLSSPVLSRRSLFSPVSC*LHTGAG
Trigger: ACCTGCACCAGTATGAAGTCAGCAGCTCACTGGGCT...GAACAAGGATCTTCTGGACAGGACAGGACTACTGAGCAGACAGTACAGTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp CCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCAGCCCAGTGAGCTGCTaGCTTCATACTGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PQIYLIHTLLGRKQEVLFSPVSC*LHTGAG
Trigger: ACCTGCACCAGTATGAAGTCAGCAGCTCACTGGGCT...GAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATTTAATCAGCGCTCTCTaGGGCGTGTATCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNLISAL*GVYPPG
Trigger: ACCTGGAGGATACACGCCTCAGAGAGCGCTGATTAA...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp CCAGAACGTGACCAGTCGGTTGTCACGGTTGATGCAGAAATCCGTGAAGTCCTTGCTCTTCCGTTCCACTaGAGTTCAAGGACATGCTGT +
Preference number: 4 (lower is better)
Translates to: PERDQSVVTVDAEIREVLALPFH*SSRTCC
Trigger: ACAGCATGTCCTTGAACTTCAGTGGAACGGAAGAGC...AAGGACTTCACGGATTTCTGCATCAACCGTGACAACCGACTGGTCACGTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR TCA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGTCTCCTAGGCTCTTCTaGCTAGCTTCCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLSPRLF*LASISS
Trigger: GCTGGAGATGGAAGCTAGTCAGAAGAGCCTAGGAGA...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTTCTCCTAGGCTCTTCTaGCTAGCTTCCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTASPRLF*LASISS
Trigger: GCTGGAGATGGAAGCTAGTCAGAAGAGCCTAGGAGA...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp ATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATGGGCTGGCCTGTGCTaGCCCCTAAACTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: IYLIHTLLGRKQEVLFRIWAGLC*PLNWCC
Trigger: ACAGCACCAGTTTAGGGGTCAGCACAGGCCAGCCCA...TATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp TTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATAGATGAAGCAGCACGGTaGAAGGCCCTTCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: FTHTCAEAKYQQWPHSLIDEAAR*KALLFR
Trigger: TCTGAACAGAAGGGCCTTTCACCGTGCTGCTTCATC...TATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTGATGAAGCAGCACGGTaGAAGGCCCTTCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTADEAAR*KALLFR
Trigger: TCTGAACAGAAGGGCCTTTCACCGTGCTGCTTCATC...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp GAGCTTCTTACTATACTGTACTGTACTGTCTGCTCAGTAGTCCTGTCCTGTCCACCGCCGCTGCTGCCCTaGAAACTTGCGTTTGGAGTA +
Preference number: 4 (lower is better)
Translates to: ELLTILYCTVCSVVLSCPPPLLP*KLAFGV
Trigger: TACTCCAAACGCAAGTTTTCAGGGCAGCAGCGGCGG...TGGACAGGACAGGACTACTGAGCAGACAGTACAGTACAGTATAGTAAGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACTGGCAATCACCACAGACATCTaGCCAGTTCGGTCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: AYPQPLLREAAWLHGALAITTDI*PVRSKF
Trigger: AAACTTTGACCGAACTGGGCAGATGTCTGTGGTGAT...TGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR GCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGTGGCTGCTCTCCCATaGACACTAAGTCCACACCAA +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNVAALP*TLSPHQ
Trigger: TTGGTGTGGACTTAGTGTGCATGGGAGAGCAGCCAC...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATGACATCACAGGAGCTTaGACTTTTGCGACTGTGATT +
Preference number: 4 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNDITGA*TFATVI
Trigger: AATCACAGTCGCAAAAGTGCAAGCTCCTGTGATGTC...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp GGTAAAGAAGGTAAGGTACATCAAGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGGATGTTGGTGCTCTTaGCCAGGGAGCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: GKEGKVHQGAGEMAQRLRGCWCS*PGSCHQ
Trigger: CTGATGACAGCTCCCTGGGCAAGAGCACCAACATCC...TCTTAACCTCTGAGCCATCTCTCCAGCCCCTTGATGTACCTTACCTTCTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATTCATCAGGATGTTGGTaGTCTTGCCCAGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNSSGCW*SCPGSC
Trigger: ACAGCTCCCTGGGCAAGAGCACCAACATCCTGATGA...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATCTGACTTCATACTGGTaGAGGTGGGGGTTAGGGATC +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNLTSYW*RWGLGI
Trigger: GATCCCTAACCCCCACCTGCACCAGTATGAAGTCAG...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTGACTTCATACTGGTaGAGGTGGGGGTTAGGGATC +
Preference number: 4 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLLTSYW*RWGLGI
Trigger: GATCCCTAACCCCCACCTGCACCAGTATGAAGTCAG...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGCCTACAGGAAAAGTGTaGATCCAGCGCCTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVEPTGKV*IQRLLL
Trigger: CAACAGAAGGCGCTGGATGCACACTTTTCCTGTAGG...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACTGGGTAGGGTCCCTCTaGCTGCTGCCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYWVGSL*LLPCSS
Trigger: AGAGCTGCAGGGCAGCAGGCAGAGGGACCCTACCCA...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACATGGGTAGGGTCCCTCTaGCTGCTGCCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTWVGSL*LLPCSS
Trigger: AGAGCTGCAGGGCAGCAGGCAGAGGGACCCTACCCA...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATATATAGAGTGGGCTACTaGTCAATGGGGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: FTHTCAEAKYQQWPHSLIYRVGY*SMGVGL
Trigger: CAGTCCCACCCCCATTGAGCAGTAGCCCACTCTATA...TATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCTATAGAGTGGGCTACTaGTCAATGGGGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPYRVGY*SMGVGL
Trigger: CAGTCCCACCCCCATTGAGCAGTAGCCCACTCTATA...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCATGGGCCCGGTCATCTaGAAGCCTTTCATGGCAGTC +
Preference number: 4 (lower is better)
Translates to: PQIYLIHTLLGRKQEVLFMGPVI*KPFMAV
Trigger: GACTGCCATGAAAGGCTTGCAGATGACCGGGCCCAT...GAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTATGGGCCCGGTCATCTaGAAGCCTTTCATGGCAGTC +
Preference number: 4 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVMGPVI*KPFMAV
Trigger: GACTGCCATGAAAGGCTTGCAGATGACCGGGCCCAT...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGACTGGAGGGCCTGCTaGCTCGAGAGAGTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: CFQSFSSLTLVQRPNISSDWRAC*LERVCR
Trigger: TCTGCACACTCTCTCGAGGCAGCAGGCCCTCCAGTC...ACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCCGTGCACAGTCGTCTaGTGTTCTCCTAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PQIYLIHTLLGRKQEVLFPCTVV*CSPRLF
Trigger: GAAGAGCCTAGGAGAACAGCAGACGACTGTGCACGG...GAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AAACAAGGAAGGCTGGACCTGGAGTTGTACATAGGGCCCAGGAGAGGTAAAGAAGAGTCATGGCAACACTaGTGTTCTCAGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KQGRLDLELYIGPRRGKEESWQH*CSQLAE
Trigger: CTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTC...TTCTTTACCTCTCCTGGGCCCTATGTACAACTCCAGGTCCAGCCTTCCTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTGCCTAGAGTCATGGCAACACTaGTGTTCTCAGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VPNIPLLVKEKDPNGSCLESWQH*CSQLAE
Trigger: CTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTC...TAGGCAGCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTCAAAGGTCTGGTTGTTaGCTCTATCCATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTAQRSGC*LYPWAG
Trigger: GCCAGCCCATGGATAGAGGCAACAACCAGACCTTTG...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCAAAGGTCTGGTTGTTaGCTCTATCCATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLQRSGC*LYPWAG
Trigger: GCCAGCCCATGGATAGAGGCAACAACCAGACCTTTG...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGCTTCACCAGATGCATaGGTTATGAGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTASPDA*VMSCSS
Trigger: GGAAGAGCAGCTCATAACGCATGCATCTGGTGAAGC...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCAGGGTCACAGTCCTCTaGTCTGGGACAGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PQIYLIHTLLGRKQEVLFRVTVL*SGTVAA
Trigger: AGCTGCTACTGTCCCAGAGCAGAGGACTGTGACCCT...GAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCATGGTAGTAACAGCTaGACCATTCCAGCCGGTCCG +
Preference number: 4 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVHGSNS*TIPAGP
Trigger: CGGACCGGCTGGAATGGTGCAGCTGTTACTACCATG...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGGAGGTAGCTTTTCGATaGCAACCTTGGACCATCTCA +
Preference number: 4 (lower is better)
Translates to: LFTHTCAEAKYQQWPHSLEVAFR*QPWTIS
Trigger: TGAGATGGTCCAAGGTTGGCATCGAAAAGCTACCTC...CAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTCGTCGCCGCCGCTGCTaGCCTGAAAACTTGCGTTTG +
Preference number: 4 (lower is better)
Translates to: CFQSFSSLTLVQRPNISSRRRRC*PENLRL
Trigger: CAAACGCAAGTTTTCAGGGCAGCAGCGGCGGCGACG...ACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCAAGCTATCGAACAGGTaGTCGCTGCCCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: HRFTSYTHSWAESRRFCSKLSNR*SLPSLS
Trigger: GCTCAAGGAGGGCAGCGAGCACCTGTTCGATAGCTT...GGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTCCTCACTTCCTCAGTaGGCAGTGCACGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLPIFLFTHTCAEAKYQQSSLPQ*AVHGLA
Trigger: TGCCAAGCCGTGCACTGCCCACTGAGGAAGTGAGGA...CTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp TTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATACTGTCATCAGAAGCCTaGCTCCTCACTTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: FTHTCAEAKYQQWPHSLILSSEA*LLTSSV
Trigger: CACTGAGGAAGTGAGGAGCCAGGCTTCTGATGACAG...TATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGATGGCCTCTCCAGATaGGCCTACAGGAAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNDGLSR*AYRKSV
Trigger: CACACTTTTCCTGTAGGCCCATCTGGAGAGGCCATC...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACGATGATGGATCTGGATaGCCTCTCCAGATGGGCCTA +
Preference number: 4 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHDDGSG*PLQMGL
Trigger: TAGGCCCATCTGGAGAGGCCATCCAGATCCATCATC...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTGATGATGGATCTGGATaGCCTCTCCAGATGGGCCTA +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTADDGSG*PLQMGL
Trigger: TAGGCCCATCTGGAGAGGCCATCCAGATCCATCATC...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACAATGCTGTCACCAGGCTaGCGGGAAGTGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTMLSPG*REVLCL
Trigger: GAGGCACAGCACTTCCCGCCAGCCTGGTGACAGCAT...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGAGGGAGTCCTTGTTCTaGGTCCTAGGATTCACACCT +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVERESLF*VLGFTP
Trigger: AGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCT...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTGCCTGGCATTGGGTCTaGAGAGGTAGAAACACTGTC +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTAAWHWV*RGRNTV
Trigger: GACAGTGTTTCTACCTCTCCAGACCCAATGCCAGGC...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp TGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTTCCTTTCTTGCCGACTaGAGGGCCTGCTGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: CFQSFSSLTLVQRPNISSSFLAD*RACCLE
Trigger: CTCGAGGCAGCAGGCCCTCCAGTCGGCAAGAAAGGA...ACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTGGCTGTCCACATAGGTaGGAGTCATGGCAACACTGC +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGGCPHR*ESWQHC
Trigger: GCAGTGTTGCCATGACTCCCACCTATGTGGACAGCC...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp CCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCAACAGCGCAGCTGCCTaGCTCCGTCCTCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: PQIYLIHTLLGRKQEVLFNSAAA*LRPPKL
Trigger: AAGTTTTGGAGGACGGAGCCAGGCAGCTGCGCTGTT...GAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GCCCGATGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTGACATGGATATACTGTaGCTTATTCTCAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ARCKRRSEEGVESPGTPGDMDIL*LILSRE
Trigger: TTCCCTGCTGAGAATAAGCCACAGTATATCCATGTC...ACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCATCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTTCACAGAACATGTTTTaGTTGGTGGAGCTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFSQNMF*LVELVE
Trigger: CTCTACCAGCTCCACCAACCAAAACATGTTCTGTGA...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTTGTGCAATGGCTTCCTaGAAAAGATGCATTCGATCC +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFCAMAS*KRCIRS
Trigger: GGATCGAATGCATCTTTTCCAGGAAGCCATTGCACA...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
3UTR CAA 72 bp TTCTCCAGGCAGTTTGTCCAGAACGTGACCAGTCGGTaGTCACGGTTGATGCAGAAATCCGTGAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FSRQFVQNVTSR*SRLMQKSVKSF
Trigger: GAAGGACTTCACGGATTTCTGCATCAACCGTGACAACCGACTGGTCACGTTCTGGACAAACTGCCTGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
3UTR CAA 72 bp AGTCGAGAATCCCTCGGAACACTCCGGTTATGTAGCTaGAATAATGGCACAGCATGTAGTGGCTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SRESLGTLRLCS*NNGTACSGCSP
Trigger: GGGAGAGCAGCCACTACATGCTGTGCCATTATTCAAGCTACATAACCGGAGTGTTCCGAGGGATTCTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR TCA 90 bp CTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGAGCCCTTCTTGTGGATaGCAAGTTTGTAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: LFTHTCAEAKYQQWPHSLSPSCG*QVCRPL
Trigger: CAAAGGTCTACAAACTTGTCATCCACAAGAAGGGCT...CAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATCCACGGCCAATATACTaGTCCTTAAAAGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNPRPIY*SLKVNS
Trigger: GGAATTGACTTTTAAGGATCAGTATATTGGCCGTGG...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGCCACGGCCAATATACTaGTCCTTAAAAGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: RTICASPCFRDRIGKIWLPRPIY*SLKVNS
Trigger: GGAATTGACTTTTAAGGATCAGTATATTGGCCGTGG...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTATTCCACTTTTTGAGTaGTATAGGCACAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFIPLFE*YRHRCS
Trigger: TGAGCACCTGTGCCTATATCACTCAAAAAGTGGAAT...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATAATGGTCACGAGGAGTaGAGTCCACTCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNNGHEE*SPLFPS
Trigger: AGAAGGGAAGAGTGGACTTCACTCCTCGTGACCATT...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACGCTTGGTCAAGATCATaGGTAGGCGGTCCACTTCAA +
Preference number: 4 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHAWSRS*VGGPLQ
Trigger: TTGAAGTGGACCGCCTACTCATGATCTTGACCAAGC...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp TGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTATGGGCCAGGCAGCCTaGACACTTGAGCATCGTAGG +
Preference number: 4 (lower is better)
Translates to: CFQSFSSLTLVQRPNISSMGQAA*TLEHRR
Trigger: CCTACGATGCTCAAGTGTTCAGGCTGCCTGGCCCAT...ACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp CCAGAACGTGACCAGTCGGTTGTCACGGTTGATGCAGAAATCCGTGAAGTCCTTGCACTTTTGCGACTGTaGTTCTCCTGTTCTCTCACA +
Preference number: 4 (lower is better)
Translates to: PERDQSVVTVDAEIREVLALLRL*FSCSLT
Trigger: TGTGAGAGAACAGGAGAATCACAGTCGCAAAAGTGC...AAGGACTTCACGGATTTCTGCATCAACCGTGACAACCGACTGGTCACGTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR TCA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCGCTGGTGTAGCCCAGTaGGCTGCTGACTTCATACTG +
Preference number: 4 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGAGVAQ*AADFIL
Trigger: CAGTATGAAGTCAGCAGCTCACTGGGCTACACCAGC...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGCTCTTCCGTTCCACTaGAGTTCAAGGACATGCTGT +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNALPFH*SSRTCC
Trigger: ACAGCATGTCCTTGAACTTCAGTGGAACGGAAGAGC...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCTGCTGGGCTGTCATTTaGACACCCTCCTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGCWAVI*TPSSSL
Trigger: GAGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCA...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTTCTCCTAGGCTCTTCTaGCTAGCTTCCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGSPRLF*LASISS
Trigger: GCTGGAGATGGAAGCTAGTCAGAAGAGCCTAGGAGA...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAAGGGTAGAAGGCAGATaGTGCTGTGCGTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTRVEGR*CCAWAA
Trigger: CGCAGCCCACGCACAGCATCATCTGCCTTCTACCCT...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000124780.8
CDS-3UTR TCA 90 bp CAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAGATGAAGCAGCACGGTaGAAGGCCCTTCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: QIYLIHTLLGRKQEVLFRDEAAR*KALLFR
Trigger: TCTGAACAGAAGGGCCTTTCACCGTGCTGCTTCATC...TCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp CACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCAGTTTGTCCAGAACGTaGCCAGTCGGTTGTCACGGT +
Preference number: 4 (lower is better)
Translates to: HRFTSYTHSWAESRRFCSSLSRT*PVGCHG
Trigger: ACCGTGACAACCGACTGGTCACGTTCTGGACAAACT...GGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCTCATCAGGATGTTGGTaGTCTTGCCCAGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HRFTSYTHSWAESRRFCSSSGCW*SCPGSC
Trigger: ACAGCTCCCTGGGCAAGAGCACCAACATCCTGATGA...GGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCCTACAGGAAAAGTGTaGATCCAGCGCCTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLPTGKV*IQRLLL
Trigger: CAACAGAAGGCGCTGGATGCACACTTTTCCTGTAGG...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTGGCAGCTTCATGGTATaGCAACTCCAACAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGGSFMV*QLQQLC
Trigger: GCAGAGCTGTTGGAGTTGGCATACCATGAAGCTGCC...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGAATCCACTCCAACTGTaGAACAGAAGCCTGGCATTG +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVENPLQL*NRSLAL
Trigger: CAATGCCAGGCTTCTGTTGCACAGTTGGAGTGGATT...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTTATAGAGTGGGCTACTaGTCAATGGGGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGYRVGY*SMGVGL
Trigger: CAGTCCCACCCCCATTGAGCAGTAGCCCACTCTATA...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp CTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGCCTTATGGAAAGTTCTaGCCATACTTAACCAATACT +
Preference number: 4 (lower is better)
Translates to: LTHSHGQSVPPPASGTGLPYGKF*PYLTNT
Trigger: AGTATTGGTTAAGTATGGGCAGAACTTTCCATAAGG...CAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AGCCTAGAGCTTCTTACTATACTGTACTGTACTGTCTGCTCAGTAGTCCTGTCCCCGTGCACAGTCGTCTaGTGTTCTCCTAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLELLTILYCTVCSVVLSPCTVV*CSPRLF
Trigger: GAAGAGCCTAGGAGAACAGCAGACGACTGTGCACGG...GGACAGGACTACTGAGCAGACAGTACAGTACAGTATAGTAAGAAGCTCTAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAGAGTCATGGCAACACTaGTGTTCTCAGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QIYLIHTLLGRKQEVLFRESWQH*CSQLAE
Trigger: CTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTC...TCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTGTTTGGTCCACAGATaGCTGAGGGTAGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSCLVHR*LRVEGR
Trigger: TCTGCCTTCTACCCTCAGGCATCTGTGGACCAAACA...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp GGTAAAGAAGGTAAGGTACATCAAGGGGCTGGAGAGATGGCTCAGAGGTTAAGACAAAGGTCTGGTTGTTaGCTCTATCCATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GKEGKVHQGAGEMAQRLRQRSGC*LYPWAG
Trigger: GCCAGCCCATGGATAGAGGCAACAACCAGACCTTTG...TCTTAACCTCTGAGCCATCTCTCCAGCCCCTTGATGTACCTTACCTTCTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CAGCAAGAAGCCACAGGAGGTAGCTTTTCGATGCCAACCTTGGACCATCTCAAAGTAGTCACCAGAGTTTaGAGAGGGAAAGGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QQEATGGSFSMPTLDHLKVVTRV*RGKGLF
Trigger: GAACAGGCCTTTCCCTCTGCAAACTCTGGTGACTAC...TTTGAGATGGTCCAAGGTTGGCATCGAAAAGCTACCTCCTGTGGCTTCTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp AAGGCCAGCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATCTTCCAGCATTTTCTaGATGATGTCTATGCCCATC +
Preference number: 4 (lower is better)
Translates to: KASSSIPTASLKRSSLASSSSIF*MMSMPI
Trigger: GATGGGCATAGACATCATGCAGAAAATGCTGGAAGA...TGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGCTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR GCA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCCCATGCTTCACCAGATaGATGCGTTATGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPPCFTR*MRYELL
Trigger: GAGCAGCTCATAACGCATGCATCTGGTGAAGCATGG...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCCATGCTTCACCAGATaGATGCGTTATGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLPCFTR*MRYELL
Trigger: GAGCAGCTCATAACGCATGCATCTGGTGAAGCATGG...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCAAAGTCATCCGCTCCTaGTGTGTACCAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGKVIRS*CVPGGR
Trigger: TCTGCCCCCTGGTACACAGCAGGAGCGGATGACTTT...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CTGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGAAAGTCATCCGCTCCTaGTGTGTACCAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLPIFLFTHTCAEAKYQQKVIRS*CVPGGR
Trigger: TCTGCCCCCTGGTACACAGCAGGAGCGGATGACTTT...CTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AAACAAGGAAGGCTGGACCTGGAGTTGTACATAGGGCCCAGGAGAGGTAAAGAAGTGCACAAGCTCTTCTaGCACAAAGGCCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: KQGRLDLELYIGPRRGKEVHKLF*HKGHLK
Trigger: TTTGAGGTGGCCTTTGTGGCAGAAGAGCTTGTGCAC...TTCTTTACCTCTCCTGGGCCCTATGTACAACTCCAGGTCCAGCCTTCCTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCGTGCACAAGCTCTTCTaGCACAAAGGCCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPVHKLF*HKGHLK
Trigger: TTTGAGGTGGCCTTTGTGGCAGAAGAGCTTGTGCAC...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCATGGTAGTAACAGCTaGACCATTCCAGCCGGTCCG +
Preference number: 4 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGHGSNS*TIPAGP
Trigger: CGGACCGGCTGGAATGGTGCAGCTGTTACTACCATG...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GGTAAAGAAGGTAAGGTACATCAAGGGGCTGGAGAGATGGCTCAGAGGTTAAGAAAACTATCGAACAGGTaGTCGCTGCCCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GKEGKVHQGAGEMAQRLRKLSNR*SLPSLS
Trigger: GCTCAAGGAGGGCAGCGAGCACCTGTTCGATAGTTT...TCTTAACCTCTGAGCCATCTCTCCAGCCCCTTGATGTACCTTACCTTCTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR GCA 90 bp ATCAGTCAAATGCTCTTAACTGAGTCATCTTTCCAGCCCCAAAGTGAGACTTTCCGTCGCCGCCGCTGCTaGCCTGAAAACTTGCGTTTG +
Preference number: 4 (lower is better)
Translates to: ISQMLLTESSFQPQSETFRRRRC*PENLRL
Trigger: CAAACGCAAGTTTTCAGGGCAGCAGCGGCGGCGACG...GAAAGTCTCACTTTGGGGCTGGAAAGATGACTCAGTTAAGAGCATTTGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp TCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTGCGGTGGATCATCAGGATGTTaGTGCTCTTGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SKSQQPSSLSFSLLKCCGGSSGC*CSCPGS
Trigger: GCTCCCTGGGCAAGAGCACCAACATCCTGATGATCC...ACCGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp CTGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGGGATCATCAGGATGTTaGTGCTCTTGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLPIFLFTHTCAEAKYQQGSSGC*CSCPGS
Trigger: GCTCCCTGGGCAAGAGCACCAACATCCTGATGATCC...CTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp TGTTTGTGTGTGCTTATTTGCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGAGCACATGGAACCTTCCTaGTGCACTGGAGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: CLCVLICLGQCLTVCVLEHMEPS*CTGVPL
Trigger: CAGAGGGACTCCAGTGCACCAGGAAGGTTCCATGTG...CTCCAGGACACACACAGTAAGACACTGTCCCAAGCAAATAAGCACACACAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAAGCTCTGCAGAGGAGTaGGTAGGGTCCCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTSSAEE*VGSLCL
Trigger: CAGGCAGAGGGACCCTACCCACTCCTCTGCAGAGCT...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACACAGAAGCCTGGCATTaGGTCTGGAGAGGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHTEAWH*VWRGRN
Trigger: GTTTCTACCTCTCCAGACCCAATGCCAGGCTTCTGT...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp CCTCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTGCGTGTGCAACAGAAGCCTaGCATTGGGTCTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PQNHSNLLPSPLVFSSAACATEA*HWVWRG
Trigger: ACCTCTCCAGACCCAATGCCAGGCTTCTGTTGCACA...CGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTTGTGCAACAGAAGCCTaGCATTGGGTCTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVCATEA*HWVWRG
Trigger: ACCTCTCCAGACCCAATGCCAGGCTTCTGTTGCACA...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGGTTTCTGGGTCTTTaGCTGTACTATGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: SHGQSVPPPASGTGLARFGFLGL*LYYDLV
Trigger: TACCAAATCATAGTACAGCCAAAGACCCAGAAACCC...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATATCTGCAAGCCTTTCATaGCAGTCCCCTTCCGAATCA +
Preference number: 4 (lower is better)
Translates to: FTHTCAEAKYQQWPHSLISASLS*QSPSES
Trigger: TGATTCGGAAGGGGACTGCCATGAAAGGCTTGCAGA...TATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTGCCTATCTGCAAGCCTTTCATaGCAGTCCCCTTCCGAATCA +
Preference number: 4 (lower is better)
Translates to: VPNIPLLVKEKDPNGSCLSASLS*QSPSES
Trigger: TGATTCGGAAGGGGACTGCCATGAAAGGCTTGCAGA...TAGGCAGCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATCATAGGTGGGAGTCATaGCAACACTGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNHRWES*QHCCSQ
Trigger: CTGAGAACAGCAGTGTTGCCATGACTCCCACCTATG...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTCATAGGTGGGAGTCATaGCAACACTGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTAHRWES*QHCCSQ
Trigger: CTGAGAACAGCAGTGTTGCCATGACTCCCACCTATG...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCCATAGGTGGGAGTCATaGCAACACTGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPHRWES*QHCCSQ
Trigger: CTGAGAACAGCAGTGTTGCCATGACTCCCACCTATG...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCCATAGGTGGGAGTCATaGCAACACTGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSHRWES*QHCCSQ
Trigger: CTGAGAACAGCAGTGTTGCCATGACTCCCACCTATG...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACGCCTGTTCTATGTTCTaGGAGTTCCCAAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHACSMF*EFPKVW
Trigger: CCAGACCTTTGGGAACTCCCAGAACATAGAACAGGC...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTCGAGGGATGCTTCATaGCTTCCAGAATCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSSRDAS*LPESPP
Trigger: TGGTGGAGATTCTGGAAGCCATGAAGCATCCCTCGA...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCCATCGCCTGCGTCTaGACCCCCTCCACGTTGTTC +
Preference number: 4 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMPIACV*TPSTLF
Trigger: GAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGG...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACTGCCATCCAGTGTAGCTTGATCTCAAAGGCGGCATTGAGAGAGAAGTTTCCAACTTGCGTTGGAAGCTaGCAAAGTCATCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TAIQCSLISKAALREKFPTCVGS*QSHPLL
Trigger: CAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGT...TGGAAACTTCTCTCTCAATGCCGCCTTTGAGATCAAGCTACACTGGATGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR CCA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGGACATGGATATACTGTaGCTTATTCTCAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RTICASPCFRDRIGKIWLDMDIL*LILSRE
Trigger: TTCCCTGCTGAGAATAAGCCACAGTATATCCATGTC...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
3UTR CAA 72 bp AGTATAGGAGGAAGCAGTAGTCATGGTCTTCGGTCTTaGCCTTCCCTGAGCAGTCTAGAGCGAAAAGCACTC +
Preference number: 4 (lower is better)
Translates to: SIGGSSSHGLRS*PSLSSLERKAL
Trigger: GAGTGCTTTTCGCTCTAGACTGCTCAGGGAAGGCAAAGACCGAAGACCATGACTACTGCTTCCTCCTATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CAA 72 bp AACAGCACTGTGGCAGTCACTGCCATCCAGTGTAGCTaGATCTCAAAGGCGGCATTGAGAGAGAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: NSTVAVTAIQCS*ISKAALREKFP
Trigger: TGGAAACTTCTCTCTCAATGCCGCCTTTGAGATCAAGCTACACTGGATGGCAGTGACTGCCACAGTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR TCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGAGCCCTTCTTGTGGATaGCAAGTTTGTAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVESPSCG*QVCRPL
Trigger: CAAAGGTCTACAAACTTGTCATCCACAAGAAGGGCT...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCTTAGCCGGAATACTTaGGTCACAGTCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVLSRNT*VTVWST
Trigger: TGTGGACCAGACTGTGACTCAAGTATTCCGGCTAAG...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp TGGATGGGAAGGGTGTTTTCAGATTCCTTTGGAGTCCCGAGAGATGTATCACGACTTAGCCGGAATACTTaGGTCACAGTCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: WMGRVFSDSFGVPRDVSRLSRNT*VTVWST
Trigger: TGTGGACCAGACTGTGACTCAAGTATTCCGGCTAAG...TCGTGATACATCTCTCGGGACTCCAAAGGAATCTGAAAACACCCTTCCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR TCA 90 bp AGCACTGGCATGCATCTTCTCCAGGCAGTTTGTCCAGAACGTGACCAGTCGGTTGTGATCCTCTTGAATTaGAGCTCGGTTTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: STGMHLLQAVCPERDQSVVILLN*SSVYFR
Trigger: CCTGAAATAAACCGAGCTTCAATTCAAGAGGATCAC...AACCGACTGGTCACGTTCTGGACAAACTGCCTGGAGAAGATGCATGCCAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR TCA 90 bp CACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCAATGGTCACGAGGAGTaGAGTCCACTCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: HRFTSYTHSWAESRRFCSNGHEE*SPLFPS
Trigger: AGAAGGGAAGAGTGGACTTCACTCCTCGTGACCATT...GGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTAGTTTCCTTGTGCTaGGGTAGAATTGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRVVSLC*GRIVSL
Trigger: CAAGGAGACAATTCTACCTCAGCACAAGGAAACTAC...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTGCTTGGTCAAGATCATaGGTAGGCGGTCCACTTCAA +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGAWSRS*VGGPLQ
Trigger: TTGAAGTGGACCGCCTACTCATGATCTTGACCAAGC...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp AGCACTGGCATGCATCTTCTCCAGGCAGTTTGTCCAGAACGTGACCAGTCGGTTTCCGGTTATGTAGCTTaGATAATGGCACAGCATGTA +
Preference number: 4 (lower is better)
Translates to: STGMHLLQAVCPERDQSVSGYVA*IMAQHV
Trigger: TACATGCTGTGCCATTATTCAAGCTACATAACCGGA...AACCGACTGGTCACGTTCTGGACAAACTGCCTGGAGAAGATGCATGCCAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR TCA 90 bp TGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTTGCTGGGCTGTCATTTaGACACCCTCCTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: CFQSFSSLTLVQRPNISSCWAVI*TPSSSL
Trigger: GAGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCA...ACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCCAGATGCATGCGTTATaGGCTGCTCTTCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSQMHAL*AALPAF
Trigger: AAATGCTGGAAGAGCAGCTCATAACGCATGCATCTG...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTTCTCAAAGGCGGCATTaGGAGAGAAGTTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTASQRRH*ERSFHG
Trigger: ACCATGGAAACTTCTCTCTCAATGCCGCCTTTGAGA...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGTCTCAAAGGCGGCATTaGGAGAGAAGTTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLSQRRH*ERSFHG
Trigger: ACCATGGAAACTTCTCTCTCAATGCCGCCTTTGAGA...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTCTAGCTCATCATCACTaGCCCCAAAGCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGLAHHH*PQSPSC
Trigger: ACAAGAAGGGCTTTGGGGGCAGTGATGATGAGCTAG...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp TGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTATGGATATCACCACAGACATCTaGCCAGTTCGGTCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: CKRRSEEGVESPGTPGMDITTDI*PVRSKF
Trigger: AAACTTTGACCGAACTGGGCAGATGTCTGTGGTGAT...ATCCATACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCGTGGCTGCTCTCCCATaGACACTAAGTCCACACCAA +
Preference number: 4 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGVAALP*TLSPHQ
Trigger: TTGGTGTGGACTTAGTGTGCATGGGAGAGCAGCCAC...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTACAGCATGTAGTGGCTaGTCTCCCATGCACACTAAG +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGTACSG*SPMHTK
Trigger: CTTAGTGTGCATGGGAGAGCAGCCACTACATGCTGT...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGAGGAGCTTGCACTTTTaGGACTGTGATTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVERSLHF*DCDSPV
Trigger: AACAGGAGAATCACAGTCGCAAAAGTGCAAGCTCCT...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGGACATCACAGGAGCTTaGACTTTTGCGACTGTGATT +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVEDITGA*TFATVI
Trigger: AATCACAGTCGCAAAAGTGCAAGCTCCTGTGATGTC...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp TCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTGCGGTGGCAGCTTCATGGTATaGCAACTCCAACAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SKSQQPSSLSFSLLKCCGGSFMV*QLQQLC
Trigger: GCAGAGCTGTTGGAGTTGGCATACCATGAAGCTGCC...ACCGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTAATCCACTCCAACTGTaGAACAGAAGCCTGGCATTG +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTANPLQL*NRSLAL
Trigger: CAATGCCAGGCTTCTGTTGCACAGTTGGAGTGGATT...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCTATAGAGTGGGCTACTaGTCAATGGGGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGYRVGY*SMGVGL
Trigger: CAGTCCCACCCCCATTGAGCAGTAGCCCACTCTATA...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGGACTGGAGGGCCTGCTaGCTCGAGAGAGTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMDWRAC*LERVCR
Trigger: TCTGCACACTCTCTCGAGGCAGCAGGCCCTCCAGTC...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATACCGTGCACAGTCGTCTaGTGTTCTCCTAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: IYLIHTLLGRKQEVLFRIPCTVV*CSPRLF
Trigger: GAAGAGCCTAGGAGAACAGCAGACGACTGTGCACGG...TATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCTGTTTGGTCCACAGATaGCTGAGGGTAGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HRFTSYTHSWAESRRFCSCLVHR*LRVEGR
Trigger: TCTGCCTTCTACCCTCAGGCATCTGTGGACCAAACA...GGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGGTAGTCACCAGAGTTTaGAGAGGGAAAGGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPVVTRV*RGKGLF
Trigger: GAACAGGCCTTTCCCTCTGCAAACTCTGGTGACTAC...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGCCATGCTTCACCAGATaGATGCGTTATGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPPCFTR*MRYELL
Trigger: GAGCAGCTCATAACGCATGCATCTGGTGAAGCATGG...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp CAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAGCAGGAATCTCAGAGTaGACAAGCTCTTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: QIYLIHTLLGRKQEVLFRAGISE*TSSSAT
Trigger: TGTGGCAGAAGAGCTTGTGCACTCTGAGATTCCTGC...TCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAGGAGCTGTGTCTGCTTaGATAAGAGGCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTGAVSA*IRGWPA
Trigger: AGCCGGCCAGCCTCTTATGCAAGCAGACACAGCTCC...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTGAGGTAGCTTTTCGATaGCAACCTTGGACCATCTCA +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTAEVAFR*QPWTIS
Trigger: TGAGATGGTCCAAGGTTGGCATCGAAAAGCTACCTC...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGATGCTGTCACCAGGCTaGCGGGAAGTGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMMLSPG*REVLCL
Trigger: GAGGCACAGCACTTCCCGCCAGCCTGGTGACAGCAT...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTAGGGAGTCCTTGTTCTaGGTCCTAGGATTCACACCT +
Preference number: 4 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVRESLF*VLGFTP
Trigger: AGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCT...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTACAGAAGCCTGGCATTaGGTCTGGAGAGGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGTEAWH*VWRGRN
Trigger: GTTTCTACCTCTCCAGACCCAATGCCAGGCTTCTGT...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTCCCTGCATGAGACGCTaGCAGATGAACTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGPCMRR*QMNSSN
Trigger: GTTTGAAGAGTTCATCTGCCAGCGTCTCATGCAGGG...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTGTGGTGTTGGGTTTCTaGGTCTTTGGCTGTACTATG +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTAVVLGF*VFGCTM
Trigger: CATAGTACAGCCAAAGACCCAGAAACCCAACACCAC...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATAGCCTCTGCTATAGAGTaGGCTACTGCTCAATGGGGG +
Preference number: 4 (lower is better)
Translates to: IYLIHTLLGRKQEVLFRIASAIE*ATAQWG
Trigger: CCCCCATTGAGCAGTAGCCCACTCTATAGCAGAGGC...TATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCGCCTCTGCTATAGAGTaGGCTACTGCTCAATGGGGG +
Preference number: 4 (lower is better)
Translates to: HICTAGVSQWYIMPQIYLASAIE*ATAQWG
Trigger: CCCCCATTGAGCAGTAGCCCACTCTATAGCAGAGGC...GAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTTCTGCAAGCCTTTCATaGCAGTCCCCTTCCGAATCA +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGSASLS*QSPSES
Trigger: TGATTCGGAAGGGGACTGCCATGAAAGGCTTGCAGA...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGTCTGCAAGCCTTTCATaGCAGTCCCCTTCCGAATCA +
Preference number: 4 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPSASLS*QSPSES
Trigger: TGATTCGGAAGGGGACTGCCATGAAAGGCTTGCAGA...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTAGACAGTGTCAGAATTaGGTCTGGAGAGGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTRQCQN*VWRGRN
Trigger: GTTTCTACCTCTCCAGACCCAATTCTGACACTGTCT...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCGAGTTCCCAAAGGTCTaGTTGTTGCCTCTATCCATG +
Preference number: 4 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPEFPKV*LLPLSM
Trigger: CATGGATAGAGGCAACAACCAGACCTTTGGGAACTC...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CCTCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTGCGGCCTGTTCTATGTTCTaGGAGTTCCCAAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PQNHSNLLPSPLVFSSAAACSMF*EFPKVW
Trigger: CCAGACCTTTGGGAACTCCCAGAACATAGAACAGGC...CGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp CAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGATCGAGGGATGCTTCATaGCTTCCAGAATCTCCACCA +
Preference number: 4 (lower is better)
Translates to: QIYLIHTLLGRKQEVLFRSRDAS*LPESPP
Trigger: TGGTGGAGATTCTGGAAGCCATGAAGCATCCCTCGA...TCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCTCAAACCACTTGCGTTaGAAGCTGGCAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPSNHLR*KLAKSS
Trigger: GGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGA...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATAAACAGCGCAGCTGCCTaGCTCCGTCCTCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: IYLIHTLLGRKQEVLFRINSAAA*LRPPKL
Trigger: AAGTTTTGGAGGACGGAGCCAGGCAGCTGCGCTGTT...TATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TGTTTGTGTGTGCTTATTTGCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGAGAGGACCCTCCAAAACTaGGACCAGCAAGAAGCCACA +
Preference number: 4 (lower is better)
Translates to: CLCVLICLGQCLTVCVLERTLQN*DQQEAT
Trigger: TGTGGCTTCTTGCTGGTCCCAGTTTTGGAGGGTCCT...CTCCAGGACACACACAGTAAGACACTGTCCCAAGCAAATAAGCACACACAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGAGCGGGATGAAGAGCTaGGCCCTCAGGGGATCACCA +
Preference number: 4 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMSGMKS*ALRGSP
Trigger: TGGTGATCCCCTGAGGGCCCAGCTCTTCATCCCGCT...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGACCACGGCCAATATACTaGTCCTTAAAAGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRPRPIY*SLKVNS
Trigger: GGAATTGACTTTTAAGGATCAGTATATTGGCCGTGG...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAATTCCACTTTTTGAGTaGTATAGGCACAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRIPLFE*YRHRCS
Trigger: TGAGCACCTGTGCCTATATCACTCAAAAAGTGGAAT...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACCAGCCTGTGCCCTaGTGCCAGCAAATTCCACTT +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTHQPVP*CQQIPL
Trigger: AAGTGGAATTTGCTGGCATCAGGGCACAGGCTGGTG...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGTGATCCTCTTGAATTaGAGCTCGGTTTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTVILLN*SSVYFR
Trigger: CCTGAAATAAACCGAGCTTCAATTCAAGAGGATCAC...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp TGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTATGGATTCCGGTTATGTAGCTTaGATAATGGCACAGCATGTA +
Preference number: 4 (lower is better)
Translates to: CKRRSEEGVESPGTPGMDSGYVA*IMAQHV
Trigger: TACATGCTGTGCCATTATTCAAGCTACATAACCGGA...ATCCATACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTGCACTTTTGCGACTGTaGTTCTCCTGTTCTCTCACA +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGALLRL*FSCSLT
Trigger: TGTGAGAGAACAGGAGAATCACAGTCGCAAAAGTGC...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp ATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACCGCCGCTGCTGCCCTaGAAACTTGCGTTTGGAGTA +
Preference number: 4 (lower is better)
Translates to: ICTAGVSQWYIMPQIYLIPPLLP*KLAFGV
Trigger: TACTCCAAACGCAAGTTTTCAGGGCAGCAGCGGCGG...TATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AAACAAGGAAGGCTGGACCTGGAGTTGTACATAGGGCCCAGGAGAGGTAAAGAAGACATCACAGGAGCTTaGACTTTTGCGACTGTGATT +
Preference number: 4 (lower is better)
Translates to: KQGRLDLELYIGPRRGKEDITGA*TFATVI
Trigger: AATCACAGTCGCAAAAGTGCAAGCTCCTGTGATGTC...TTCTTTACCTCTCCTGGGCCCTATGTACAACTCCAGGTCCAGCCTTCCTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCGGCAGCTTCATGGTATaGCAACTCCAACAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HICTAGVSQWYIMPQIYLGSFMV*QLQQLC
Trigger: GCAGAGCTGTTGGAGTTGGCATACCATGAAGCTGCC...GAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACATATAGAGTGGGCTACTaGTCAATGGGGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTYRVGY*SMGVGL
Trigger: CAGTCCCACCCCCATTGAGCAGTAGCCCACTCTATA...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTGCGGTGTGCACAAGCTCTTCTaGCACAAAGGCCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: SKSQQPSSLSFSLLKCCGVHKLF*HKGHLK
Trigger: TTTGAGGTGGCCTTTGTGGCAGAAGAGCTTGTGCAC...ACCGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GGTAAAGAAGGTAAGGTACATCAAGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGAGGTAGCTTTTCGATaGCAACCTTGGACCATCTCA +
Preference number: 4 (lower is better)
Translates to: GKEGKVHQGAGEMAQRLREVAFR*QPWTIS
Trigger: TGAGATGGTCCAAGGTTGGCATCGAAAAGCTACCTC...TCTTAACCTCTGAGCCATCTCTCCAGCCCCTTGATGTACCTTACCTTCTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCATGGAGCACTGGCATaGATCTTCTCCAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGHGALA*IFSRQF
Trigger: AAACTGCCTGGAGAAGATGCATGCCAGTGCTCCATG...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTCAGTCGCACCAACACTaGATACTGGATGAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTAQSHQH*ILDEEF
Trigger: AAACTCTTCATCCAGTATCCAGTGTTGGTGCGACTG...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGCATAATCTACTTGGATaGGAAGGGTGTTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: RTICASPCFRDRIGKIWLHNLLG*EGCFQI
Trigger: AATCTGAAAACACCCTTCCCATCCAAGTAGATTATG...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCAGGGAGTCCTTGTTCTaGGTCCTAGGATTCACACCT +
Preference number: 4 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGRESLF*VLGFTP
Trigger: AGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCT...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCTGCATGAGACGCTaGCAGATGAACTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGPCMRR*QMNSSN
Trigger: GTTTGAAGAGTTCATCTGCCAGCGTCTCATGCAGGG...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTGTGGTGTTGGGTTTCTaGGTCTTTGGCTGTACTATG +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGVVLGF*VFGCTM
Trigger: CATAGTACAGCCAAAGACCCAGAAACCCAACACCAC...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTGTGGTGTTGGGTTTCTaGGTCTTTGGCTGTACTATG +
Preference number: 4 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVVVLGF*VFGCTM
Trigger: CATAGTACAGCCAAAGACCCAGAAACCCAACACCAC...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACAGTGGGACTGTGGTGTTaGGTTTCTGGGTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTVGLWC*VSGSLA
Trigger: AGCCAAAGACCCAGAAACCCAACACCACAGTCCCAC...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACAACTGCTCAATGGGGGTaGGACTGTGGTGTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTTAQWG*DCGVGF
Trigger: AAACCCAACACCACAGTCCCACCCCCATTGAGCAGT...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp AGCCTAGAGCTTCTTACTATACTGTACTGTACTGTCTGCTCAGTAGTCCTGTCCCATAGGTGGGAGTCATaGCAACACTGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SLELLTILYCTVCSVVLSHRWES*QHCCSQ
Trigger: CTGAGAACAGCAGTGTTGCCATGACTCCCACCTATG...GGACAGGACTACTGAGCAGACAGTACAGTACAGTATAGTAAGAAGCTCTAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAGGCTGTCCACATAGGTaGGAGTCATGGCAACACTGC +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTGCPHR*ESWQHC
Trigger: GCAGTGTTGCCATGACTCCCACCTATGTGGACAGCC...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAGAGTTCCCAAAGGTCTaGTTGTTGCCTCTATCCATG +
Preference number: 4 (lower is better)
Translates to: QIYLIHTLLGRKQEVLFREFPKV*LLPLSM
Trigger: CATGGATAGAGGCAACAACCAGACCTTTGGGAACTC...TCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACTGTTCAGACAGCAGCTaGACTCCTGTCGAGGGATGC +
Preference number: 4 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYCSDSS*TPVEGC
Trigger: GCATCCCTCGACAGGAGTCCAGCTGCTGTCTGAACA...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTACTTGCGTTGGAAGCTaGCAAAGTCATCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CFQSFSSLTLVQRPNISSTCVGS*QSHPLL
Trigger: CAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGT...ACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGTCAAACCACTTGCGTTaGAAGCTGGCAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPSNHLR*KLAKSS
Trigger: GGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGA...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGTGATCCTCTTGAATTaGAGCTCGGTTTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNVILLN*SSVYFR
Trigger: CCTGAAATAAACCGAGCTTCAATTCAAGAGGATCAC...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGGTAGTTTCCTTGTGCTaGGGTAGAATTGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPVVSLC*GRIVSL
Trigger: CAAGGAGACAATTCTACCTCAGCACAAGGAAACTAC...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATTCCGGTTATGTAGCTTaGATAATGGCACAGCATGTA +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNSGYVA*IMAQHV
Trigger: TACATGCTGTGCCATTATTCAAGCTACATAACCGGA...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp CTGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTCTCAAAGGCGGCATTaGGAGAGAAGTTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: LLPIFLFTHTCAEAKYQQSQRRH*ERSFHG
Trigger: ACCATGGAAACTTCTCTCTCAATGCCGCCTTTGAGA...CTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAAGTTTGTCCAGAACGTaGCCAGTCGGTTGTCACGGT +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTSLSRT*PVGCHG
Trigger: ACCGTGACAACCGACTGGTCACGTTCTGGACAAACT...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTATCACCACAGACATCTaGCCAGTTCGGTCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGITTDI*PVRSKF
Trigger: AAACTTTGACCGAACTGGGCAGATGTCTGTGGTGAT...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp ACACTTGAGCATCGTAGGCATCATAATCTACTTGGATGGGAAGGGTGTTTTCAGACAGCATGTAGTGGCTaGTCTCCCATGCACACTAAG +
Preference number: 4 (lower is better)
Translates to: TLEHRRHHNLLGWEGCFQTACSG*SPMHTK
Trigger: CTTAGTGTGCATGGGAGAGCAGCCACTACATGCTGT...CTGAAAACACCCTTCCCATCCAAGTAGATTATGATGCCTACGATGCTCAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201836.2
CDS-3UTR GCA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAGGAGCTTGCACTTTTaGGACTGTGATTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPRSLHF*DCDSPV
Trigger: AACAGGAGAATCACAGTCGCAAAAGTGCAAGCTCCT...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp GTATTCCATCAGTTGAACTCCTGCCAGGTAATTTTCTATGTCTTCCAAGTTACCGGATGTTGGTGCTCTTaGCCAGGGAGCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: VFHQLNSCQVIFYVFQVTGCWCS*PGSCHQ
Trigger: CTGATGACAGCTCCCTGGGCAAGAGCACCAACATCC...GGTAACTTGGAAGACATAGAAAATTACCTGGCAGGAGTTCAACTGATGGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GCGGAGACAGAATATTTATCTTGCACAAATCCAAACCTGTGTGCAATGGCTTCCCCTACAGGAAAAGTGTaGATCCAGCGCCTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: AETEYLSCTNPNLCAMASPTGKV*IQRLLL
Trigger: CAACAGAAGGCGCTGGATGCACACTTTTCCTGTAGG...GGAAGCCATTGCACACAGGTTTGGATTTGTGCAAGATAAATATTCTGTCTCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACAAAGGTCTGGTTGTTaGCTCTATCCATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTQRSGC*LYPWAG
Trigger: GCCAGCCCATGGATAGAGGCAACAACCAGACCTTTG...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATCAAGAGTCACATCCTTaGGGTCTACAACATTCACAT +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNQESHP*GLQHSH
Trigger: ATGTGAATGTTGTAGACCCCAAGGATGTGACTCTTG...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTCAGTCGCACCAACACTaGATACTGGATGAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGQSHQH*ILDEEF
Trigger: AAACTCTTCATCCAGTATCCAGTGTTGGTGCGACTG...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp GTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTGCCTAGTTTTCAGATTCCTTTaGAGTCCCGAGAGATGTATC +
Preference number: 4 (lower is better)
Translates to: VPNIPLLVKEKDPNGSCLVFRFL*SPERCI
Trigger: GATACATCTCTCGGGACTCCAAAGGAATCTGAAAAC...TAGGCAGCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCGTTTTCAGATTCCTTTaGAGTCCCGAGAGATGTATC +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSVFRFL*SPERCI
Trigger: GATACATCTCTCGGGACTCCAAAGGAATCTGAAAAC...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp CTGAACTTAAATCACCAATGGCAAACACCTTTATTTATTGAGCTTGGAATCTGGGGACATCTCGGGTGCTaGTGTAGCCCAGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LNLNHQWQTPLFIELGIWGHLGC*CSPVSC
Trigger: GCAGCTCACTGGGCTACACCAGCACCCGAGATGTCC...CCAGATTCCAAGCTCAATAAATAAAGGTGTTTGCCATTGGTGATTTAAGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp CACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCAGGGAGTCCTTGTTCTaGGTCCTAGGATTCACACCT +
Preference number: 4 (lower is better)
Translates to: HICTAGVSQWYIMPQIYLRESLF*VLGFTP
Trigger: AGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCT...GAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTCCCTGCATGAGACGCTaGCAGATGAACTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: CFQSFSSLTLVQRPNISSPCMRR*QMNSSN
Trigger: GTTTGAAGAGTTCATCTGCCAGCGTCTCATGCAGGG...ACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGGTTTCTGGGTCTTTaGCTGTACTATGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNGFLGL*LYYDLV
Trigger: TACCAAATCATAGTACAGCCAAAGACCCAGAAACCC...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp AGCCTAGAGCTTCTTACTATACTGTACTGTACTGTCTGCTCAGTAGTCCTGTCCGTGGTGTTGGGTTTCTaGGTCTTTGGCTGTACTATG +
Preference number: 4 (lower is better)
Translates to: SLELLTILYCTVCSVVLSVVLGF*VFGCTM
Trigger: CATAGTACAGCCAAAGACCCAGAAACCCAACACCAC...GGACAGGACTACTGAGCAGACAGTACAGTACAGTATAGTAAGAAGCTCTAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACACTGCTCAATGGGGGTaGGACTGTGGTGTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYTAQWG*DCGVGF
Trigger: AAACCCAACACCACAGTCCCACCCCCATTGAGCAGT...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTTGAGTGTCACCTTATaGAAAGTTCTGCCCATACTT +
Preference number: 4 (lower is better)
Translates to: VQACVDGASGTSNSTPVELSVTL*KVLPIL
Trigger: AAGTATGGGCAGAACTTTCCATAAGGTGACACTCAA...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp ATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCTGCAAGCCTTTCATaGCAGTCCCCTTCCGAATCA +
Preference number: 4 (lower is better)
Translates to: IYLIHTLLGRKQEVLFRISASLS*QSPSES
Trigger: TGATTCGGAAGGGGACTGCCATGAAAGGCTTGCAGA...TATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGGGCTGTCCACATAGGTaGGAGTCATGGCAACACTGC +
Preference number: 4 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMGCPHR*ESWQHC
Trigger: GCAGTGTTGCCATGACTCCCACCTATGTGGACAGCC...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTTGTCAGAATTGGGTCTaGAGAGGTAGAAACACTGTC +
Preference number: 4 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVCQNWV*RGRNTV
Trigger: GACAGTGTTTCTACCTCTCCAGACCCAATTCTGACA...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACTGCCATCCAGTGTAGCTTGATCTCAAAGGCGGCATTGAGAGAGAAGTTTCCATGTCAGAATTGGGTCTaGAGAGGTAGAAACACTGTC +
Preference number: 4 (lower is better)
Translates to: TAIQCSLISKAALREKFPCQNWV*RGRNTV
Trigger: GACAGTGTTTCTACCTCTCCAGACCCAATTCTGACA...TGGAAACTTCTCTCTCAATGCCGCCTTTGAGATCAAGCTACACTGGATGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR CCA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACAGGACCCTCCAAAACTaGGACCAGCAAGAAGCCACA +
Preference number: 4 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYRTLQN*DQQEAT
Trigger: TGTGGCTTCTTGCTGGTCCCAGTTTTGGAGGGTCCT...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCGACATGGATATACTGTaGCTTATTCTCAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPDMDIL*LILSRE
Trigger: TTCCCTGCTGAGAATAAGCCACAGTATATCCATGTC...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCTCACAGAACATGTTTTaGTTGGTGGAGCTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: PQIYLIHTLLGRKQEVLFSQNMF*LVELVE
Trigger: CTCTACCAGCTCCACCAACCAAAACATGTTCTGTGA...GAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCCAAACCTGTGTGCAATaGCTTCCTGGAAAAGATGCA +
Preference number: 4 (lower is better)
Translates to: HRFTSYTHSWAESRRFCSQTCVQ*LPGKDA
Trigger: TGCATCTTTTCCAGGAAGCCATTGCACACAGGTTTG...GGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
3UTR CAA 72 bp TCCTGTCCAGAAGATCCTTGTTCTTGCCCAAGGACTTaGAAAAAGAAACCTATCAAGCCAGCTCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SCPEDPCSCPRT*KKKPIKPAQSQ
Trigger: CTGGCTCTGAGCTGGCTTGATAGGTTTCTTTTTCAAAGTCCTTGGGCAAGAACAAGGATCTTCTGGACAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTATTCCACTTTTTGAGTaGTATAGGCACAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVIPLFE*YRHRCS
Trigger: TGAGCACCTGTGCCTATATCACTCAAAAAGTGGAAT...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp CAGCCTGAACACTTGAGCATCGTAGGCATCATAATCTACTTGGATGGGAAGGGTATTCCACTTTTTGAGTaGTATAGGCACAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: QPEHLSIVGIIIYLDGKGIPLFE*YRHRCS
Trigger: TGAGCACCTGTGCCTATATCACTCAAAAAGTGGAAT...ACCCTTCCCATCCAAGTAGATTATGATGCCTACGATGCTCAAGTGTTCAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR TCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAAATGGTCACGAGGAGTaGAGTCCACTCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTNGHEE*SPLFPS
Trigger: AGAAGGGAAGAGTGGACTTCACTCCTCGTGACCATT...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGTTTTATCCGTGGAGTaGAACTGTTACAAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNVLSVE*NCYKRA
Trigger: AGCTCTTTTGTAACAGTTTCACTCCACGGATAAAAC...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR TCA 90 bp CACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCCAGATGCATGCGTTATaGGCTGCTCTTCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: HICTAGVSQWYIMPQIYLQMHAL*AALPAF
Trigger: AAATGCTGGAAGAGCAGCTCATAACGCATGCATCTG...GAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AAACAAGGAAGGCTGGACCTGGAGTTGTACATAGGGCCCAGGAGAGGTAAAGAATTAAGCGACTTGACTTaGAAAAGCAAAGGACTGTAC +
Preference number: 4 (lower is better)
Translates to: KQGRLDLELYIGPRRGKELSDLT*KSKGLY
Trigger: GTACAGTCCTTTGCTTTTGCAAGTCAAGTCGCTTAA...TTCTTTACCTCTCCTGGGCCCTATGTACAACTCCAGGTCCAGCCTTCCTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAACAGCATGTAGTGGCTaGTCTCCCATGCACACTAAG +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTTACSG*SPMHTK
Trigger: CTTAGTGTGCATGGGAGAGCAGCCACTACATGCTGT...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp GTATTCCATCAGTTGAACTCCTGCCAGGTAATTTTCTATGTCTTCCAAGTTACCTCATCAGGATGTTGGTaGTCTTGCCCAGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VFHQLNSCQVIFYVFQVTSSGCW*SCPGSC
Trigger: ACAGCTCCCTGGGCAAGAGCACCAACATCCTGATGA...GGTAACTTGGAAGACATAGAAAATTACCTGGCAGGAGTTCAACTGATGGAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GTATTCCATCAGTTGAACTCCTGCCAGGTAATTTTCTATGTCTTCCAAGTTACCGGCAGCTTCATGGTATaGCAACTCCAACAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VFHQLNSCQVIFYVFQVTGSFMV*QLQQLC
Trigger: GCAGAGCTGTTGGAGTTGGCATACCATGAAGCTGCC...GGTAACTTGGAAGACATAGAAAATTACCTGGCAGGAGTTCAACTGATGGAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGACCTTATGGAAAGTTCTaGCCATACTTAACCAATACT +
Preference number: 4 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRPYGKF*PYLTNT
Trigger: AGTATTGGTTAAGTATGGGCAGAACTTTCCATAAGG...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp GTATTCCATCAGTTGAACTCCTGCCAGGTAATTTTCTATGTCTTCCAAGTTACCGATGAAGGTCCGCCATaGTTCACCAGATGCATGCGT +
Preference number: 4 (lower is better)
Translates to: VFHQLNSCQVIFYVFQVTDEGPP*FTRCMR
Trigger: ACGCATGCATCTGGTGAAGCATGGCGGACCTTCATC...GGTAACTTGGAAGACATAGAAAATTACCTGGCAGGAGTTCAACTGATGGAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACGTGCACAAGCTCTTCTaGCACAAAGGCCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYVHKLF*HKGHLK
Trigger: TTTGAGGTGGCCTTTGTGGCAGAAGAGCTTGTGCAC...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACGCAGGAATCTCAGAGTaGACAAGCTCTTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYAGISE*TSSSAT
Trigger: TGTGGCAGAAGAGCTTGTGCACTCTGAGATTCCTGC...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AGAACAATAAATTGGCCTTTATTCTGCTTCTCTCCGGCTGTTTTCTATCCACTTAGGGTCACAGTCCTCTaGTCTGGGACAGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RTINWPLFCFSPAVFYPLRVTVL*SGTVAA
Trigger: AGCTGCTACTGTCCCAGAGCAGAGGACTGTGACCCT...AAGTGGATAGAAAACAGCCGGAGAGAAGCAGAATAAAGGCCAATTTATTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCAAATCCAAACCTGTGTaGAATGGCTTCCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PQIYLIHTLLGRKQEVLFKSKPV*NGFLEK
Trigger: CTTTTCCAGGAAGCCATTGCACACAGGTTTGGATTT...GAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTGTTTTCAGATTCCTTTaGAGTCCCGAGAGATGTATC +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGVFRFL*SPERCI
Trigger: GATACATCTCTCGGGACTCCAAAGGAATCTGAAAAC...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTCATAATCTACTTGGATaGGAAGGGTGTTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTHNLLG*EGCFQI
Trigger: AATCTGAAAACACCCTTCCCATCCAAGTAGATTATG...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp AGAACAATAAATTGGCCTTTATTCTGCTTCTCTCCGGCTGTTTTCTATCCACTTGGATCATCAGGATGTTaGTGCTCTTGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RTINWPLFCFSPAVFYPLGSSGC*CSCPGS
Trigger: GCTCCCTGGGCAAGAGCACCAACATCCTGATGATCC...AAGTGGATAGAAAACAGCCGGAGAGAAGCAGAATAAAGGCCAATTTATTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp ATCAGTCAAATGCTCTTAACTGAGTCATCTTTCCAGCCCCAAAGTGAGACTTTCCCCTGCATGAGACGCTaGCAGATGAACTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: ISQMLLTESSFQPQSETFPCMRR*QMNSSN
Trigger: GTTTGAAGAGTTCATCTGCCAGCGTCTCATGCAGGG...GAAAGTCTCACTTTGGGGCTGGAAAGATGACTCAGTTAAGAGCATTTGACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp AAACAAGGAAGGCTGGACCTGGAGTTGTACATAGGGCCCAGGAGAGGTAAAGAATTGAGTGTCACCTTATaGAAAGTTCTGCCCATACTT +
Preference number: 4 (lower is better)
Translates to: KQGRLDLELYIGPRRGKELSVTL*KVLPIL
Trigger: AAGTATGGGCAGAACTTTCCATAAGGTGACACTCAA...TTCTTTACCTCTCCTGGGCCCTATGTACAACTCCAGGTCCAGCCTTCCTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTTTGAGTGTCACCTTATaGAAAGTTCTGCCCATACTT +
Preference number: 4 (lower is better)
Translates to: YTHSWAESRRFCSEYPTALSVTL*KVLPIL
Trigger: AAGTATGGGCAGAACTTTCCATAAGGTGACACTCAA...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCTGTCAGAATTGGGTCTaGAGAGGTAGAAACACTGTC +
Preference number: 4 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGCQNWV*RGRNTV
Trigger: GACAGTGTTTCTACCTCTCCAGACCCAATTCTGACA...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCAGACAGTGTCAGAATTaGGTCTGGAGAGGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGRQCQN*VWRGRN
Trigger: GTTTCTACCTCTCCAGACCCAATTCTGACACTGTCT...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACAGAGTTCCCAAAGGTCTaGTTGTTGCCTCTATCCATG +
Preference number: 4 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTEFPKV*LLPLSM
Trigger: CATGGATAGAGGCAACAACCAGACCTTTGGGAACTC...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp AAAGGTACATCAATGGGGTGTGTGATTAACTCTAGTATAGGAGGAAGCAGTAGTACTTGCGTTGGAAGCTaGCAAAGTCATCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KGTSMGCVINSSIGGSSSTCVGS*QSHPLL
Trigger: CAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGT...ACTACTGCTTCCTCCTATACTAGAGTTAATCACACACCCCATTGATGTACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CAA 72 bp CTCAGTAGTCCTGTCCTGTCCAGAAGATCCTTGTTCTaGCCCAAGGACTTTGAAAAAGAAACCTATCAAGCC +
Preference number: 4 (lower is better)
Translates to: LSSPVLSRRSLF*PKDFEKETYQA
Trigger: GGCTTGATAGGTTTCTTTTTCAAAGTCCTTGGGCAAGAACAAGGATCTTCTGGACAGGACAGGACTACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CAA 72 bp AAGTCCACACCAATTCCATTATCAATCATCCGCTGCTaGGTCAAGATCATGAGTAGGCGGTCCACTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KSTPIPLSIIRC*VKIMSRRSTSK
Trigger: CTTTGAAGTGGACCGCCTACTCATGATCTTGACCAAGCAGCGGATGATTGATAATGGAATTGGTGTGGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
3UTR CAA 72 bp TCCTTTGGAGTCCCGAGAGATGTATCACGACCATTTTaGGTTTTCTCAGAGGCAGACTTCTTTCCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: SFGVPRDVSRPF*VFSEADFFPAS
Trigger: ACTAGCAGGAAAGAAGTCTGCCTCTGAGAAAACCAAAAATGGTCGTGATACATCTCTCGGGACTCCAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
CDS-3UTR TCA 90 bp ACACTTGAGCATCGTAGGCATCATAATCTACTTGGATGGGAAGGGTGTTTTCAGAGCCCTTCTTGTGGATaGCAAGTTTGTAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: TLEHRRHHNLLGWEGCFQSPSCG*QVCRPL
Trigger: CAAAGGTCTACAAACTTGTCATCCACAAGAAGGGCT...CTGAAAACACCCTTCCCATCCAAGTAGATTATGATGCCTACGATGCTCAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR TCA 90 bp ATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATAGCTCTTCCGTTCCACTaGAGTTCAAGGACATGCTGT +
Preference number: 4 (lower is better)
Translates to: ICTAGVSQWYIMPQIYLIALPFH*SSRTCC
Trigger: ACAGCATGTCCTTGAACTTCAGTGGAACGGAAGAGC...TATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCAGATGCATGCGTTATaGGCTGCTCTTCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYQMHAL*AALPAF
Trigger: AAATGCTGGAAGAGCAGCTCATAACGCATGCATCTG...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTTTAAGCGACTTGACTTaGAAAAGCAAAGGACTGTAC +
Preference number: 4 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGLSDLT*KSKGLY
Trigger: GTACAGTCCTTTGCTTTTGCAAGTCAAGTCGCTTAA...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR GCA 90 bp CCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCTTAAGCGACTTGACTTaGAAAAGCAAAGGACTGTAC +
Preference number: 4 (lower is better)
Translates to: PQIYLIHTLLGRKQEVLFLSDLT*KSKGLY
Trigger: GTACAGTCCTTTGCTTTTGCAAGTCAAGTCGCTTAA...GAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCCCTTATGGAAAGTTCTaGCCATACTTAACCAATACT +
Preference number: 4 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSPYGKF*PYLTNT
Trigger: AGTATTGGTTAAGTATGGGCAGAACTTTCCATAAGG...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp AGCAGGGAAGTTAAAAGCGGAGACAGAATATTTATCTTGCACAAATCCAAACCTGAGTCATGGCAACACTaGTGTTCTCAGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SREVKSGDRIFILHKSKPESWQH*CSQLAE
Trigger: CTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTC...AGGTTTGGATTTGTGCAAGATAAATATTCTGTCTCCGCTTTTAACTTCCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR GCA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACGCATGCGTTATGAGCTaGTCTTCCAGCATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYACVMS*SSSIFC
Trigger: GCAGAAAATGCTGGAAGAGCAGCTCATAACGCATGC...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp GTATTCCATCAGTTGAACTCCTGCCAGGTAATTTTCTATGTCTTCCAAGTTACCCCATGCTTCACCAGATaGATGCGTTATGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VFHQLNSCQVIFYVFQVTPCFTR*MRYELL
Trigger: GAGCAGCTCATAACGCATGCATCTGGTGAAGCATGG...GGTAACTTGGAAGACATAGAAAATTACCTGGCAGGAGTTCAACTGATGGAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACGAGGTAGCTTTTCGATaGCAACCTTGGACCATCTCA +
Preference number: 4 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYEVAFR*QPWTIS
Trigger: TGAGATGGTCCAAGGTTGGCATCGAAAAGCTACCTC...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGCAAGAGTCACATCCTTaGGGTCTACAACATTCACAT +
Preference number: 4 (lower is better)
Translates to: LLPIFLFTHTCAEAKYQQQESHP*GLQHSH
Trigger: ATGTGAATGTTGTAGACCCCAAGGATGTGACTCTTG...CTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp TCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTGCGGTGTTTTCAGATTCCTTTaGAGTCCCGAGAGATGTATC +
Preference number: 4 (lower is better)
Translates to: SKSQQPSSLSFSLLKCCGVFRFL*SPERCI
Trigger: GATACATCTCTCGGGACTCCAAAGGAATCTGAAAAC...ACCGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATCATAATCTACTTGGATaGGAAGGGTGTTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNHNLLG*EGCFQI
Trigger: AATCTGAAAACACCCTTCCCATCCAAGTAGATTATG...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CCA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGAGGGAGTCCTTGTTCTaGGTCCTAGGATTCACACCT +
Preference number: 4 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMRESLF*VLGFTP
Trigger: AGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCT...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp AGAACAATAAATTGGCCTTTATTCTGCTTCTCTCCGGCTGTTTTCTATCCACTTGCCTGGCATTGGGTCTaGAGAGGTAGAAACACTGTC +
Preference number: 4 (lower is better)
Translates to: RTINWPLFCFSPAVFYPLAWHWV*RGRNTV
Trigger: GACAGTGTTTCTACCTCTCCAGACCCAATGCCAGGC...AAGTGGATAGAAAACAGCCGGAGAGAAGCAGAATAAAGGCCAATTTATTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp CTGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGGGGTTTCTGGGTCTTTaGCTGTACTATGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: LLPIFLFTHTCAEAKYQQGFLGL*LYYDLV
Trigger: TACCAAATCATAGTACAGCCAAAGACCCAGAAACCC...CTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGTTGAGTGTCACCTTATaGAAAGTTCTGCCCATACTT +
Preference number: 4 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPLSVTL*KVLPIL
Trigger: AAGTATGGGCAGAACTTTCCATAAGGTGACACTCAA...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CTGAACTTAAATCACCAATGGCAAACACCTTTATTTATTGAGCTTGGAATCTGGGGCTGTCCACATAGGTaGGAGTCATGGCAACACTGC +
Preference number: 4 (lower is better)
Translates to: LNLNHQWQTPLFIELGIWGCPHR*ESWQHC
Trigger: GCAGTGTTGCCATGACTCCCACCTATGTGGACAGCC...CCAGATTCCAAGCTCAATAAATAAAGGTGTTTGCCATTGGTGATTTAAGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CAA 72 bp TACATTATGCCACAGATTTACCTCATACACACACTCTaGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCC +
Preference number: 4 (lower is better)
Translates to: YIMPQIYLIHTL*GRKQEVLFRIS
Trigger: GGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGCATAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
3UTR CAA 72 bp CCTGAACACTTGAGCATCGTAGGCATCATAATCTACTaGGATGGGAAGGGTGTTTTCAGATTCCTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: PEHLSIVGIIIY*DGKGVFRFLWS
Trigger: ACTCCAAAGGAATCTGAAAACACCCTTCCCATCCAAGTAGATTATGATGCCTACGATGCTCAAGTGTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000195980.5
ENSMUST00000201836.2
CDS-3UTR TCA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACAGCCCTTCTTGTGGATaGCAAGTTTGTAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYSPSCG*QVCRPL
Trigger: CAAAGGTCTACAAACTTGTCATCCACAAGAAGGGCT...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR TCA 90 bp ATAATCTACTTGGATGGGAAGGGTGTTTTCAGATTCCTTTGGAGTCCCGAGAGACCACGGCCAATATACTaGTCCTTAAAAGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: IIYLDGKGVFRFLWSPERPRPIY*SLKVNS
Trigger: GGAATTGACTTTTAAGGATCAGTATATTGGCCGTGG...TCTCTCGGGACTCCAAAGGAATCTGAAAACACCCTTCCCATCCAAGTAGATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR TCA 90 bp AAAGGTACATCAATGGGGTGTGTGATTAACTCTAGTATAGGAGGAAGCAGTAGTGCACTTTTGCGACTGTaGTTCTCCTGTTCTCTCACA +
Preference number: 4 (lower is better)
Translates to: KGTSMGCVINSSIGGSSSALLRL*FSCSLT
Trigger: TGTGAGAGAACAGGAGAATCACAGTCGCAAAAGTGC...ACTACTGCTTCCTCCTATACTAGAGTTAATCACACACCCCATTGATGTACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp CTGAACTTAAATCACCAATGGCAAACACCTTTATTTATTGAGCTTGGAATCTGGTTAATCAGCGCTCTCTaGGGCGTGTATCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LNLNHQWQTPLFIELGIWLISAL*GVYPPG
Trigger: ACCTGGAGGATACACGCCTCAGAGAGCGCTGATTAA...CCAGATTCCAAGCTCAATAAATAAAGGTGTTTGCCATTGGTGATTTAAGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp CTGAACTTAAATCACCAATGGCAAACACCTTTATTTATTGAGCTTGGAATCTGGGATGAAGCAGCACGGTaGAAGGCCCTTCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LNLNHQWQTPLFIELGIWDEAAR*KALLFR
Trigger: TCTGAACAGAAGGGCCTTTCACCGTGCTGCTTCATC...CCAGATTCCAAGCTCAATAAATAAAGGTGTTTGCCATTGGTGATTTAAGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp ATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAGATGCATGCGTTATaGGCTGCTCTTCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: ICTAGVSQWYIMPQIYLIQMHAL*AALPAF
Trigger: AAATGCTGGAAGAGCAGCTCATAACGCATGCATCTG...TATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp TCCTTCCATTTAGTAAACAGGTCGGCGAGGAAACCGTTCACAGCTTTCTCAAAGTTAAGCGACTTGACTTaGAAAAGCAAAGGACTGTAC +
Preference number: 4 (lower is better)
Translates to: SFHLVNRSARKPFTAFSKLSDLT*KSKGLY
Trigger: GTACAGTCCTTTGCTTTTGCAAGTCAAGTCGCTTAA...CTTTGAGAAAGCTGTGAACGGTTTCCTCGCCGACCTGTTTACTAAATGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR GCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAAGGAGCTTGCACTTTTaGGACTGTGATTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTRSLHF*DCDSPV
Trigger: AACAGGAGAATCACAGTCGCAAAAGTGCAAGCTCCT...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp ACTGTACTGTACTGTCTGCTCAGTAGTCCTGTCCTGTCCAGAAGATCCTTGTTCCCTTATGGAAAGTTCTaGCCATACTTAACCAATACT +
Preference number: 4 (lower is better)
Translates to: TVLYCLLSSPVLSRRSLFPYGKF*PYLTNT
Trigger: AGTATTGGTTAAGTATGGGCAGAACTTTCCATAAGG...GAACAAGGATCTTCTGGACAGGACAGGACTACTGAGCAGACAGTACAGTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp CACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCTCTTCCAGCATTTTCTaGATGATGTCTATGCCCATC +
Preference number: 4 (lower is better)
Translates to: HICTAGVSQWYIMPQIYLSSSIF*MMSMPI
Trigger: GATGGGCATAGACATCATGCAGAAAATGCTGGAAGA...GAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp CATTTAGTAAACAGGTCGGCGAGGAAACCGTTCACAGCTTTCTCAAAGTACAGACAAGAGTCACATCCTTaGGGTCTACAACATTCACAT +
Preference number: 4 (lower is better)
Translates to: HLVNRSARKPFTAFSKYRQESHP*GLQHSH
Trigger: ATGTGAATGTTGTAGACCCCAAGGATGTGACTCTTG...TCTGTACTTTGAGAAAGCTGTGAACGGTTTCCTCGCCGACCTGTTTACTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR CCA 90 bp ATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATAGGGTTTCTGGGTCTTTaGCTGTACTATGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: IYLIHTLLGRKQEVLFRIGFLGL*LYYDLV
Trigger: TACCAAATCATAGTACAGCCAAAGACCCAGAAACCC...TATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATAGTGGTGTTGGGTTTCTaGGTCTTTGGCTGTACTATG +
Preference number: 4 (lower is better)
Translates to: ICTAGVSQWYIMPQIYLIVVLGF*VFGCTM
Trigger: CATAGTACAGCCAAAGACCCAGAAACCCAACACCAC...TATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp ATCAGTCAAATGCTCTTAACTGAGTCATCTTTCCAGCCCCAAAGTGAGACTTTCATTCCACTTTTTGAGTaGTATAGGCACAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ISQMLLTESSFQPQSETFIPLFE*YRHRCS
Trigger: TGAGCACCTGTGCCTATATCACTCAAAAAGTGGAAT...GAAAGTCTCACTTTGGGGCTGGAAAGATGACTCAGTTAAGAGCATTTGACTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp CATCGTAGGCATCATAATCTACTTGGATGGGAAGGGTGTTTTCAGATTCCTTTGTCCGGTTATGTAGCTTaGATAATGGCACAGCATGTA +
Preference number: 4 (lower is better)
Translates to: HRRHHNLLGWEGCFQIPLSGYVA*IMAQHV
Trigger: TACATGCTGTGCCATTATTCAAGCTACATAACCGGA...CAAAGGAATCTGAAAACACCCTTCCCATCCAAGTAGATTATGATGCCTACGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201836.2
CDS-3UTR GCA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGGACATCACAGGAGCTTaGACTTTTGCGACTGTGATT +
Preference number: 4 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMDITGA*TFATVI
Trigger: AATCACAGTCGCAAAAGTGCAAGCTCCTGTGATGTC...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAAAATCCAAACCTGTGTaGAATGGCTTCCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTKSKPV*NGFLEK
Trigger: CTTTTCCAGGAAGCCATTGCACACAGGTTTGGATTT...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACAAGAGTCACATCCTTaGGGTCTACAACATTCACAT +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTQESHP*GLQHSH
Trigger: ATGTGAATGTTGTAGACCCCAAGGATGTGACTCTTG...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CCA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAGGGTTTCTGGGTCTTTaGCTGTACTATGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTGFLGL*LYYDLV
Trigger: TACCAAATCATAGTACAGCCAAAGACCCAGAAACCC...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACATTGAGTGTCACCTTATaGAAAGTTCTGCCCATACTT +
Preference number: 4 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTLSVTL*KVLPIL
Trigger: AAGTATGGGCAGAACTTTCCATAAGGTGACACTCAA...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CCA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGTCACAGAACATGTTTTaGTTGGTGGAGCTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMSQNMF*LVELVE
Trigger: CTCTACCAGCTCCACCAACCAAAACATGTTCTGTGA...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
3UTR CAA 72 bp CAAACGAAAACATCCTTTTTGTTTGTGTGTGCTTATTaGCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QTKTSFLFVCAY*LGTVSYCVCPG
Trigger: TCCAGGACACACACAGTAAGACACTGTCCCAAGCAAATAAGCACACACAAACAAAAAGGATGTTTTCGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR TCA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGGTGATCCTCTTGAATTaGAGCTCGGTTTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMVILLN*SSVYFR
Trigger: CCTGAAATAAACCGAGCTTCAATTCAAGAGGATCAC...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR GCA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACACCTTATGGAAAGTTCTaGCCATACTTAACCAATACT +
Preference number: 4 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTPYGKF*PYLTNT
Trigger: AGTATTGGTTAAGTATGGGCAGAACTTTCCATAAGG...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATATCTTCCAGCATTTTCTaGATGATGTCTATGCCCATC +
Preference number: 4 (lower is better)
Translates to: ICTAGVSQWYIMPQIYLISSSIF*MMSMPI
Trigger: GATGGGCATAGACATCATGCAGAAAATGCTGGAAGA...TATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR GCA 90 bp ATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATAAAATCCAAACCTGTGTaGAATGGCTTCCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: ICTAGVSQWYIMPQIYLIKSKPV*NGFLEK
Trigger: CTTTTCCAGGAAGCCATTGCACACAGGTTTGGATTT...TATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR TCA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGGTTTTATCCGTGGAGTaGAACTGTTACAAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMVLSVE*NCYKRA
Trigger: AGCTCTTTTGTAACAGTTTCACTCCACGGATAAAAC...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
3UTR CAA 72 bp GGAACCCTGAACATACCCATCTGGGAAAACGAGAACTaGATTTACTCTCTTTTCAGTACTAAGCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: GTLNIPIWENEN*IYSLFSTKLFQ
Trigger: TTGAAAGAGCTTAGTACTGAAAAGAGAGTAAATCAAGTTCTCGTTTTCCCAGATGGGTATGTTCAGGGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR GCA 90 bp GTATTCCATCAGTTGAACTCCTGCCAGGTAATTTTCTATGTCTTCCAAGTTACCCCTTATGGAAAGTTCTaGCCATACTTAACCAATACT +
Preference number: 4 (lower is better)
Translates to: VFHQLNSCQVIFYVFQVTPYGKF*PYLTNT
Trigger: AGTATTGGTTAAGTATGGGCAGAACTTTCCATAAGG...GGTAACTTGGAAGACATAGAAAATTACCTGGCAGGAGTTCAACTGATGGAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CCA 90 bp AAAGGTACATCAATGGGGTGTGTGATTAACTCTAGTATAGGAGGAAGCAGTAGTCATAATCTACTTGGATaGGAAGGGTGTTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: KGTSMGCVINSSIGGSSSHNLLG*EGCFQI
Trigger: AATCTGAAAACACCCTTCCCATCCAAGTAGATTATG...ACTACTGCTTCCTCCTATACTAGAGTTAATCACACACCCCATTGATGTACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
3UTR CAA 72 bp GTACTAAGCTCTTTCAAACGAAAACATCCTTTTTGTTaGTGTGTGCTTATTTGCTTGGGACAGTGTCTTACT +
Preference number: 4 (lower is better)
Translates to: VLSSFKRKHPFC*CVLICLGQCLT
Trigger: AGTAAGACACTGTCCCAAGCAAATAAGCACACACAAACAAAAAGGATGTTTTCGTTTGAAAGAGCTTAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS GCA 90 bp CGCTCCTGCTGTGTACCAGGGGGCAGAGGGCTGCTGCATAGCCACTaGATGATGTCTATGCCCATCGCCTGCGTCTGGACCCCCTCCACG +
Preference number: 5 (lower is better)
Translates to: RSCCVPGGRGLLHSH*MMSMPIACVWTPST
Trigger: CGTGGAGGGGGTCCAGACGCAGGCGATGGGCATAGACATCATGCAGTGGCTATGCAGCAGCCCTCTGCCCCCTGGTACACAGCAGGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS CCA 90 bp CGAGAGAGTGTGCAGAGATGGGCCCGGTCATCTGCAAGCCTTTCATaGCAGTCCCCTTCCGAATCATGCGGTCTGAGCGGTGGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: RESVQRWARSSASLS*QSPSESCGLSGGAC
Trigger: GCAGGCGCCACCGCTCAGACCGCATGATTCGGAAGGGGACTGCCATGAAAGGCTTGCAGATGACCGGGCCCATCTCTGCACACTCTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000130461.2
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCTGGACCCCCTCCACGTaGTTCATCAACCAGTGTACG +
Preference number: 5 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLWTPST*FINQCT
Trigger: CGTACACTGGTTGATGAACAACGTGGAGGGGGTCCA...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCACCAGAGGAGCTGTTaGGTCCACAGATGCCTTGCG +
Preference number: 5 (lower is better)
Translates to: TCCPEPDRKASSSIPTASHQRSC*VHRCLA
Trigger: CGCAAGGCATCTGTGGACCAAACAGCTCCTCTGGTG...AGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS GCA 90 bp TGCAGAGGAGTGGGTAGGGTCCCTCTGCCTGCTGCCCTGCAGCTCTaGCATGTTTTGCCGGGTCTGATGATGGATCTGGATGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: CRGVGRVPLPAALQL*HVLPGLMMDLDGLS
Trigger: GGAGAGGCCATCCAGATCCATCATCAGACCCGGCAAAACATGGCAGAGCTGCAGGGCAGCAGGCAGAGGGACCCTACCCACTCCTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS GCA 90 bp GCCCGGTCATCTGCAAGCCTTTCATGGCAGTCCCCTTCCGAATCATaGGGTCTGAGCGGTGGCGCCTGCGGATGCGATTTAAGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: ARSSASLSWQSPSES*GLSGGACGCDLSPL
Trigger: TAGAGGGCTTAAATCGCATCCGCAGGCGCCACCGCTCAGACCGCATGATTCGGAAGGGGACTGCCATGAAAGGCTTGCAGATGACCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000130461.2
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCTCACGTGGACCCCCTCCACGTaGTTCATCAACCAGTGTACG +
Preference number: 5 (lower is better)
Translates to: WSSGRTQVPNPAPKWWLTWTPST*FINQCT
Trigger: CGTACACTGGTTGATGAACAACGTGGAGGGGGTCCA...CGTGAGCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAAGGAGCTGTGTCTGCTaGCATAAGAGGCTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTRSCVC*HKRLAG
Trigger: GCCGGCCAGCCTCTTATGCAAGCAGACACAGCTCCT...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS TCA 90 bp TTCATGGGCATCCTCGAGGGGGCGAAGGGGTTAATCAGCGCTCTCTaGGGCGTGTATCCTCCAGGTCGGACATGGAGCATGGACTCTGCA +
Preference number: 5 (lower is better)
Translates to: FMGILEGAKGLISAL*GVYPPGRTWSMDSA
Trigger: TGCAGAGTCCATGCTCCATGTCCGACCTGGAGGATACACGCCTCAGAGAGCGCTGATTAACCCCTTCGCCCCCTCGAGGATGCCCATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
CDS CCA 90 bp GCTCTTCTGCCACAAAGGCCACCTCAAACCACTTGCGTTGGAAGCTaGCAAAGTCATCCGCTCCTGCTGTGTACCAGGGGGCAGAGGGCT +
Preference number: 5 (lower is better)
Translates to: ALLPQRPPQTTCVGS*QSHPLLLCTRGQRA
Trigger: AGCCCTCTGCCCCCTGGTACACAGCAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGCCTTTGTGGCAGAAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCCAGAACATGTTTTGGTaGGTGGAGCTGGTAGAGTTC +
Preference number: 5 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLQNMFW*VELVEF
Trigger: GAACTCTACCAGCTCCACCAACCAAAACATGTTCTG...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCCTCACAGAACATGTTTaGGTTGGTGGAGCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLLTEHV*VGGAGR
Trigger: TCTACCAGCTCCACCAACCAAAACATGTTCTGTGAG...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCACACCAGAGGAGCTGTTaGGTCCACAGATGCCTTGCG +
Preference number: 5 (lower is better)
Translates to: THSHGQSVPPPASGTGLAHQRSC*VHRCLA
Trigger: CGCAAGGCATCTGTGGACCAAACAGCTCCTCTGGTG...TGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS GCA 90 bp GCACCTTGCGTGGGCTGTCCACATAGGTGGGAGTCATGGCAACACTaGTGTTCTCAGCTGGCTGAGTGGAGCTTTTTCCGTGCACAGTCG +
Preference number: 5 (lower is better)
Translates to: APCVGCPHRWESWQH*CSQLAEWSFFRAQS
Trigger: CGACTGTGCACGGAAAAAGCTCCACTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTCCCACCTATGTGGACAGCCCACGCAAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS GCA 90 bp CGTCCTTGCGTGGGCTGTCCACATAGGTGGGAGTCATGGCAACACTaGTGTTCTCAGCTGGCTGAGTGGAGCTTTTTCCGTGCACAGTCG +
Preference number: 5 (lower is better)
Translates to: RPCVGCPHRWESWQH*CSQLAEWSFFRAQS
Trigger: CGACTGTGCACGGAAAAAGCTCCACTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTCCCACCTATGTGGACAGCCCACGCAAGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000124780.8
CDS GCA 90 bp AGAGGGCTGCTGCATAGCCACTGCATGATGTCTATGCCCATCGCCTaGGTCTGGACCCCCTCCACGTTGTTCATCAACCAGTGTACGACC +
Preference number: 5 (lower is better)
Translates to: RGLLHSHCMMSMPIA*VWTPSTLFINQCTT
Trigger: GGTCGTACACTGGTTGATGAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGGCATAGACATCATGCAGTGGCTATGCAGCAGCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS GCA 90 bp GTCCCTTGCGTGGGCTGTCCACATAGGTGGGAGTCATGGCAACACTaGTGTTCTCAGCTGGCTGAGTGGAGCTTTTTCCGTGCACAGTCG +
Preference number: 5 (lower is better)
Translates to: VPCVGCPHRWESWQH*CSQLAEWSFFRAQS
Trigger: CGACTGTGCACGGAAAAAGCTCCACTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTCCCACCTATGTGGACAGCCCACGCAAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130461.2
CDS CCA 90 bp TCAGCGCTCTCTGAGGCGTGTATCCTCCAGGTCGGACATGGAGCATaGACTCTGCACTACCCACATGGAACCTTCCTGGTGCACTGGAGT +
Preference number: 5 (lower is better)
Translates to: SALSEACILQVGHGA*TLHYPHGTFLVHWS
Trigger: ACTCCAGTGCACCAGGAAGGTTCCATGTGGGTAGTGCAGAGTCCATGCTCCATGTCCGACCTGGAGGATACACGCCTCAGAGAGCGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS CCA 90 bp AGCTCTTCCGTTCCACTGAAGTTCAAGGACATGCTGTCACCAGGCTaGCGGGAAGTGCTGTGCCTCCCGGCAGCTTCATGGTATGCCAAC +
Preference number: 5 (lower is better)
Translates to: SSSVPLKFKDMLSPG*REVLCLPAASWYAN
Trigger: GTTGGCATACCATGAAGCTGCCGGGAGGCACAGCACTTCCCGCCAGCCTGGTGACAGCATGTCCTTGAACTTCAGTGGAACGGAAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTACACCTGTACTGCTGTaGCTAAGCAGGCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: PHSQTLTHSHGQSVPPPATPVLL*LSRLTE
Trigger: TTCTGTCAGCCTGCTTAGCAACAGCAGTACAGGTGT...AGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGTGGGACTGTGGTGTaGGGTTTCTGGGTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: TDSLPRTICASPCFRDRIGGTVV*GFWVFG
Trigger: GCCAAAGACCCAGAAACCCAACACCACAGTCCCACC...AATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GCACTTGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCTGTAGTCACCAGAGTTaGCAGAGGGAAAGGCCTGTT +
Preference number: 5 (lower is better)
Translates to: ALGALGGPRFPTQHPNGGCSHQS*QRERPV
Trigger: AACAGGCCTTTCCCTCTGCAAACTCTGGTGACTACA...GCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCAAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp TGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCTCACGACGATGTTAGAGAGCTaGCTACATGCTGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: WSSGRTQVPNPAPKWWLTTMLES*LHAAES
Trigger: GCTCTCAGCAGCATGTAGCAAGCTCTCTAACATCGT...CGTGAGCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAAGCCGGTCCGTTCGGTaGTTCACATCAACATCCAGG +
Preference number: 5 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTSRSVR*FTSTSR
Trigger: CCTGGATGTTGATGTGAACAACCGAACGGACCGGCT...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACATGCTGCCCTGAAAACTaGCGTTTGGAGTACGGCAGC +
Preference number: 5 (lower is better)
Translates to: QTLTHSHGQSVPPPASGTCCPEN*RLEYGS
Trigger: GCTGCCGTACTCCAAACGCAAGTTTTCAGGGCAGCA...TGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CTGACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGTGCTGCCCTGAAAACTaGCGTTTGGAGTACGGCAGC +
Preference number: 5 (lower is better)
Translates to: LTHSHGQSVPPPASGTGLCCPEN*RLEYGS
Trigger: GCTGCCGTACTCCAAACGCAAGTTTTCAGGGCAGCA...CAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCTCACGAGTCGGTTGTCACGGTaGATGCAGAAATCCGTGAAG +
Preference number: 5 (lower is better)
Translates to: WSSGRTQVPNPAPKWWLTSRLSR*MQKSVK
Trigger: CTTCACGGATTTCTGCATCAACCGTGACAACCGACT...CGTGAGCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119705.8
CDS GCA 90 bp ATGCCTTGCGTGGGCTGTCCACATAGGTGGGAGTCATGGCAACACTaGTGTTCTCAGCTGGCTGAGTGGAGCTTTTTCCGTGCACAGTCG +
Preference number: 5 (lower is better)
Translates to: MPCVGCPHRWESWQH*CSQLAEWSFFRAQS
Trigger: CGACTGTGCACGGAAAAAGCTCCACTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTCCCACCTATGTGGACAGCCCACGCAAGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CCA 90 bp TATCCTCCAGGTCGGACATGGAGCATGGACTCTGCACTACCCACATaGAACCTTCCTGGTGCACTGGAGTCCCTCTGTGGGGGTTCTATC +
Preference number: 5 (lower is better)
Translates to: YPPGRTWSMDSALPT*NLPGALESLCGGSI
Trigger: GATAGAACCCCCACAGAGGGACTCCAGTGCACCAGGAAGGTTCCATGTGGGTAGTGCAGAGTCCATGCTCCATGTCCGACCTGGAGGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS CCA 90 bp TGCACAAGCTCTTCTGCCACAAAGGCCACCTCAAACCACTTGCGTTaGAAGCTGGCAAAGTCATCCGCTCCTGCTGTGTACCAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: CTSSSATKATSNHLR*KLAKSSAPAVYQGA
Trigger: TGCCCCCTGGTACACAGCAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGCCTTTGTGGCAGAAGAGCTTGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CCA 90 bp CTGCTGCATAGCCACTGCATGATGTCTATGCCCATCGCCTGCGTCTaGACCCCCTCCACGTTGTTCATCAACCAGTGTACGACCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LLHSHCMMSMPIACV*TPSTLFINQCTTSA
Trigger: TGCTGAGGTCGTACACTGGTTGATGAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGGCATAGACATCATGCAGTGGCTATGCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS CCA 90 bp GGTTTTTCCATTCCTCCCATCCTCAGTCCCCACTGGTCCCTTGCGTaGGCTGTCCACATAGGTGGGAGTCATGGCAACACTGCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: GFSIPPILSPHWSLA*AVHIGGSHGNTAVL
Trigger: GAGAACAGCAGTGTTGCCATGACTCCCACCTATGTGGACAGCCCACGCAAGGGACCAGTGGGGACTGAGGATGGGAGGAATGGAAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130461.2
CDS-3UTR CAA 90 bp CACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTATCCAGCGCCTTCTGTaGGAGGTGAGCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: HGQSVPPPASGTGLARFGIQRLL*EVSFMG
Trigger: GCCCATGAAGCTCACCTCCAACAGAAGGCGCTGGAT...ACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATATCCAGCGCCTTCTGTaGGAGGTGAGCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNIQRLL*EVSFMG
Trigger: GCCCATGAAGCTCACCTCCAACAGAAGGCGCTGGAT...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATCCGTGAAGTCCTTCAGCAGCCGATCAGCAAACTTCTCGTCCCCTGTGGCACTGGTGGGACTGTGGTGTaGGGTTTCTGGGTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: IREVLQQPISKLLVPCGTGGTVV*GFWVFG
Trigger: GCCAAAGACCCAGAAACCCAACACCACAGTCCCACC...AGTGCCACAGGGGACGAGAAGTTTGCTGATCGGCTGCTGAAGGACTTCACGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR CAA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTGGGACTGTGGTGTaGGGTTTCTGGGTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SHGQSVPPPASGTGLARFGGTVV*GFWVFG
Trigger: GCCAAAGACCCAGAAACCCAACACCACAGTCCCACC...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTCGTTACTGTGATCATCTaGTCCTTGAGTGTCACCTTA +
Preference number: 5 (lower is better)
Translates to: PAAQSLTGRPAPAYPQPLVTVII*SLSVTL
Trigger: TAAGGTGACACTCAAGGACAAGATGATCACAGTAAC...GAGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACACCAGAGGAGCTGTTaGGTCCACAGATGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: APAYPQPLLREAAWLHGAHQRSC*VHRCLR
Trigger: CCTCAGGCATCTGTGGACCAAACAGCTCCTCTGGTG...TGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR CAA 90 bp CTGCCTACCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCTGTAGTCACCAGAGTTaGCAGAGGGAAAGGCCTGTT +
Preference number: 5 (lower is better)
Translates to: LPTPLPDTDSLPRTICASCSHQS*QRERPV
Trigger: AACAGGCCTTTCCCTCTGCAAACTCTGGTGACTACA...GGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GCCCGATGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTGCCACCTCAAACCACTaGCGTTGGAAGCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: ARCKRRSEEGVESPGTPGATSNH*RWKLAK
Trigger: CTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGC...ACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCATCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp GCACTTGGAGCTCTGGGAGGACCCAGGTTCCCAACCCAGCACCCAAATGGTGGCCAGAACATGTTTTGGTaGGTGGAGCTGGTAGAGTTC +
Preference number: 5 (lower is better)
Translates to: ALGALGGPRFPTQHPNGGQNMFW*VELVEF
Trigger: GAACTCTACCAGCTCCACCAACCAAAACATGTTCTG...GCCACCATTTGGGTGCTGGGTTGGGAACCTGGGTCCTCCCAGAGCTCCAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS TCA 90 bp GTTCATCAACCAGTGTACGACCTCAGCACTGATGAAGCAGCACGGTaGAAGGCCCTTCTGTTCAGACAGCAGCTGGACTCCTGTCGAGGG +
Preference number: 5 (lower is better)
Translates to: VHQPVYDLSTDEAAR*KALLFRQQLDSCRG
Trigger: CCCTCGACAGGAGTCCAGCTGCTGTCTGAACAGAAGGGCCTTTCACCGTGCTGCTTCATCAGTGCTGAGGTCGTACACTGGTTGATGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS GCA 90 bp GACATGGAGCATGGACTCTGCACTACCCACATGGAACCTTCCTGGTaGACTGGAGTCCCTCTGTGGGGGTTCTATCATGTTCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: DMEHGLCTTHMEPSW*TGVPLWGFYHVLQD
Trigger: GTCCTGGAGAACATGATAGAACCCCCACAGAGGGACTCCAGTGCACCAGGAAGGTTCCATGTGGGTAGTGCAGAGTCCATGCTCCATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS GCA 90 bp GCTTCACCAGATGCATGCGTTATGAGCTGCTCTTCCAGCATTTTCTaGATGATGTCTATGCCCATCGCCTGCGTCTGGACCCCCTCCACG +
Preference number: 5 (lower is better)
Translates to: ASPDACVMSCSSSIF*MMSMPIACVWTPST
Trigger: CGTGGAGGGGGTCCAGACGCAGGCGATGGGCATAGACATCATGCAGAAAATGCTGGAAGAGCAGCTCATAACGCATGCATCTGGTGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS GCA 90 bp CAGAGTGCACAAGCTCTTCTGCCACAAAGGCCACCTCAAACCACTTaGGTTGGAAGCTGGCAAAGTCATCCGCTCCTGCTGTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: QSAQALLPQRPPQTT*VGSWQSHPLLLCTR
Trigger: CCTGGTACACAGCAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGCCTTTGTGGCAGAAGAGCTTGTGCACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS GCA 90 bp CCAGGGCAGGAGGAAGGCAGGAATCTCAGAGTGCACAAGCTCTTCTaGCACAAAGGCCACCTCAAACCACTTGCGTTGGAAGCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: PGQEEGRNLRVHKLF*HKGHLKPLALEAGK
Trigger: TTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGCCTTTGTGGCAGAAGAGCTTGTGCACTCTGAGATTCCTGCCTTCCTCCTGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS GCA 90 bp ATAGGGTTTTTCCATTCCTCCCATCCTCAGTCCCCACTGGTCCCTTaGGTGGGCTGTCCACATAGGTGGGAGTCATGGCAACACTGCTGT +
Preference number: 5 (lower is better)
Translates to: IGFFHSSHPQSPLVP*VGCPHRWESWQHCC
Trigger: ACAGCAGTGTTGCCATGACTCCCACCTATGTGGACAGCCCACGCAAGGGACCAGTGGGGACTGAGGATGGGAGGAATGGAAAAACCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130461.2
CDS CCA 90 bp TGCACTACCCACATGGAACCTTCCTGGTGCACTGGAGTCCCTCTGTaGGGGTTCTATCATGTTCTCCAGGACATCTCGGGTGCTGGTGTA +
Preference number: 5 (lower is better)
Translates to: CTTHMEPSWCTGVPL*GFYHVLQDISGAGV
Trigger: TACACCAGCACCCGAGATGTCCTGGAGAACATGATAGAACCCCCACAGAGGGACTCCAGTGCACCAGGAAGGTTCCATGTGGGTAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS CCA 90 bp GGAGCATGGACTCTGCACTACCCACATGGAACCTTCCTGGTGCACTaGAGTCCCTCTGTGGGGGTTCTATCATGTTCTCCAGGACATCTC +
Preference number: 5 (lower is better)
Translates to: GAWTLHYPHGTFLVH*SPSVGVLSCSPGHL
Trigger: GAGATGTCCTGGAGAACATGATAGAACCCCCACAGAGGGACTCCAGTGCACCAGGAAGGTTCCATGTGGGTAGTGCAGAGTCCATGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS CCA 90 bp GCTGTCCACATAGGTGGGAGTCATGGCAACACTGCTGTTCTCAGCTaGCTGAGTGGAGCTTTTTCCGTGCACAGTCGTCTGCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: AVHIGGSHGNTAVLS*LSGAFSVHSRLLFS
Trigger: GGAGAACAGCAGACGACTGTGCACGGAAAAAGCTCCACTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTCCCACCTATGTGGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000130461.2
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACCTGCTGCCCAGAGCCTGACCGGAAGGCCAGCTCCAGCATACCCACAGCCTCTTGCTTGTCAAACACATaGAATGACAAGTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: TCCPEPDRKASSSIPTASCLSNT*NDKLMA
Trigger: GGCCATCAACTTGTCATTCAATGTGTTTGACAAGCA...AGAGGCTGTGGGTATGCTGGAGCTGGCCTTCCGGTCAGGCTCTGGGCAGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp ACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGGCAGCCTGAACACTaGAGCATCGTAGGCATCATA +
Preference number: 5 (lower is better)
Translates to: THSHGQSVPPPASGTGLARQPEH*SIVGII
Trigger: TATGATGCCTACGATGCTCAAGTGTTCAGGCTGCCT...TGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp GCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACTGGCAAGGATGTTGGTGCTCTaGCCCAGGGAGCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: AYPQPLLREAAWLHGALARMLVL*PRELSS
Trigger: TGATGACAGCTCCCTGGGCAAGAGCACCAACATCCT...TGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR CAA 90 bp ACTGCAGGAACTGGAGCTCAAGGCCAGGAGCATCTCAGGACAGCTGATAGGCAAAGGATGTTGGTGCTCTaGCCCAGGGAGCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: TAGTGAQGQEHLRTADRQRMLVL*PRELSS
Trigger: TGATGACAGCTCCCTGGGCAAGAGCACCAACATCCT...TTGCCTATCAGCTGTCCTGAGATGCTCCTGGCCTTGAGCTCCAGTTCCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp GGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTTCCTCTAGGGAGTCCTaGTTCTGGGTCCTAGGATTC +
Preference number: 5 (lower is better)
Translates to: GWRDGSEVKSTDCSPRGPSSRES*FWVLGF
Trigger: GAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGA...AGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACCTCTGAGCCATCTCTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGCCAAAGGTCTGGTTGTaGCCTCTATCCATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RTICASPCFRDRIGKIWLPKVWL*PLSMGW
Trigger: CCAGCCCATGGATAGAGGCAACAACCAGACCTTTGG...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACCATTCCAGCCGGTCCGTTCGGTTGTTCACATCAACATCCAGGGTCACAGTCCCCAAAGGTCTGGTTGTaGCCTCTATCCATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TIPAGPFGCSHQHPGSQSPKVWL*PLSMGW
Trigger: CCAGCCCATGGATAGAGGCAACAACCAGACCTTTGG...GGACTGTGACCCTGGATGTTGATGTGAACAACCGAACGGACCGGCTGGAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR CAA 90 bp GGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTTTCCCAAAGGTCTGGTaGTTGCCTCTATCCATGGGC +
Preference number: 5 (lower is better)
Translates to: GWRDGSEVKSTDCSPRGPFPKVW*LPLSMG
Trigger: GCCCATGGATAGAGGCAACAACCAGACCTTTGGGAA...AGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACCTCTGAGCCATCTCTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp CACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTAGCCGGTCCGTTCGGTaGTTCACATCAACATCCAGG +
Preference number: 5 (lower is better)
Translates to: HGQSVPPPASGTGLARFGSRSVR*FTSTSR
Trigger: CCTGGATGTTGATGTGAACAACCGAACGGACCGGCT...ACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTGCCATCCAGTGTAGCTaGATCTCAAAGGCGGCATTG +
Preference number: 5 (lower is better)
Translates to: GWRDGSEVKSTDCSPRGPAIQCS*ISKAAL
Trigger: CAATGCCGCCTTTGAGATCAAGCTACACTGGATGGC...AGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACCTCTGAGCCATCTCTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp GACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCCAGAACATGTTTTGGTaGGTGGAGCTGGTAGAGTTC +
Preference number: 5 (lower is better)
Translates to: DSLPRTICASPCFRDRIGQNMFW*VELVEF
Trigger: GAACTCTACCAGCTCCACCAACCAAAACATGTTCTG...GCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS TCA 90 bp GAGCTTTTTCCGTGCACAGTCGTCTGCTGTTCTCCTAGGCTCTTCTaGCTAGCTTCCATCTCCAGCAGGGCAGACAGAGCTGAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: ELFPCTVVCCSPRLF*LASISSRADRAEVP
Trigger: AGGAACCTCAGCTCTGTCTGCCCTGCTGGAGATGGAAGCTAGTCAGAAGAGCCTAGGAGAACAGCAGACGACTGTGCACGGAAAAAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS TCA 90 bp TCCCAAAGGTCTGGTTGTTGCCTCTATCCATGGGCTGGCCTGTGCTaGCCCCTAAACTGGTGCTGTCTAACACCAGAGGAGCTGTTTGGT +
Preference number: 5 (lower is better)
Translates to: SQRSGCCLYPWAGLC*PLNWCCLTPEELFG
Trigger: ACCAAACAGCTCCTCTGGTGTTAGACAGCACCAGTTTAGGGGTCAGCACAGGCCAGCCCATGGATAGAGGCAACAACCAGACCTTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS GCA 90 bp AGCTGCTCTTCCAGCATTTTCTGCATGATGTCTATGCCCATCGCCTaGGTCTGGACCCCCTCCACGTTGTTCATCAACCAGTGTACGACC +
Preference number: 5 (lower is better)
Translates to: SCSSSIFCMMSMPIA*VWTPSTLFINQCTT
Trigger: GGTCGTACACTGGTTGATGAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGGCATAGACATCATGCAGAAAATGCTGGAAGAGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS GCA 90 bp CTGGCAAAGTCATCCGCTCCTGCTGTGTACCAGGGGGCAGAGGGCTaGTGCATAGCCACTCTTTCCGGTTCTTTGTCCATTACTATCTTG +
Preference number: 5 (lower is better)
Translates to: LAKSSAPAVYQGAEG*CIATLSGSLSITIL
Trigger: CAAGATAGTAATGGACAAAGAACCGGAAAGAGTGGCTATGCAGCAGCCCTCTGCCCCCTGGTACACAGCAGGAGCGGATGACTTTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CCA 90 bp TTCTGGGAGTTCCCAAAGGTCTGGTTGTTGCCTCTATCCATGGGCTaGCCTGTGCTGACCCCTAAACTGGTGCTGTCTAACACCAGAGGA +
Preference number: 5 (lower is better)
Translates to: FWEFPKVWLLPLSMG*PVLTPKLVLSNTRG
Trigger: TCCTCTGGTGTTAGACAGCACCAGTTTAGGGGTCAGCACAGGCCAGCCCATGGATAGAGGCAACAACCAGACCTTTGGGAACTCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp AGGCCAGCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATATGACCTTCTCATTCTaGACCCACAGCTCACCAGCC +
Preference number: 5 (lower is better)
Translates to: RPAPAYPQPLLREAAWLHMTFSF*THSSPA
Trigger: GGCTGGTGAGCTGTGGGTCAAGAATGAGAAGGTCAT...ATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGCTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR CAA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGATCCAGCGCCTTCTGTaGGAGGTGAGCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: VQACVDGASGTSNSTPVEIQRLL*EVSFMG
Trigger: GCCCATGAAGCTCACCTCCAACAGAAGGCGCTGGAT...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp TCAGAGGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTGAGTTCAAATCCCAGATCCAGCGCCTTCTGTaGGAGGTGAGCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: SEVKSTDCSPRGPEFKSQIQRLL*EVSFMG
Trigger: GCCCATGAAGCTCACCTCCAACAGAAGGCGCTGGAT...CTGGGATTTGAACTCAGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp TCAAAGCTATCGAACAGGTGCTCGCTGCCCTCCTTGAGCAAGCAGCTGAGGTTGTTGCTGGGCTGTCATTaGAACACCCTCCTCATCCCT +
Preference number: 5 (lower is better)
Translates to: SKLSNRCSLPSLSKQLRLLLGCH*NTLLIP
Trigger: AGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCAA...CAACCTCAGCTGCTTGCTCAAGGAGGGCAGCGAGCACCTGTTCGATAGCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR CAA 90 bp AACAGCTGCTGTGACCACAGAGGAGGCTGGCATGGAACCCTGAACATACCCATCTTCCCAAAGGTCTGGTaGTTGCCTCTATCCATGGGC +
Preference number: 5 (lower is better)
Translates to: NSCCDHRGGWHGTLNIPIFPKVW*LPLSMG
Trigger: GCCCATGGATAGAGGCAACAACCAGACCTTTGGGAA...GATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTGGTCACAGCAGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp ACTCACTCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCACTCACAGAACATGTTTaGGTTGGTGGAGCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: THSHGQSVPPPASGTGLALTEHV*VGGAGR
Trigger: TCTACCAGCTCCACCAACCAAAACATGTTCTGTGAG...TGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGAGTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS TCA 90 bp TTCTATCATGTTCTCCAGGACATCTCGGGTGCTGGTGTAGCCCAGTaGGCTGCTGACTTCATACTGGTGCAGGTGGGGGTTAGGGATCAT +
Preference number: 5 (lower is better)
Translates to: FYHVLQDISGAGVAQ*AADFILVQVGVRDH
Trigger: ATGATCCCTAACCCCCACCTGCACCAGTATGAAGTCAGCAGCTCACTGGGCTACACCAGCACCCGAGATGTCCTGGAGAACATGATAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS TCA 90 bp AGACGCTGGCAGATGAACTCTTCAAACACTTGCTGGGCTGTCATTTaGACACCCTCCTCATCCCTCCTGTCCATGTCTGCTTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: RRWQMNSSNTCWAVI*TPSSSLLSMSASGR
Trigger: CCTCCCAGAAGCAGACATGGACAGGAGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCAAGTGTTTGAAGAGTTCATCTGCCAGCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CCA 90 bp GGACACAAGGCCTCTGCTATAGAGTGGGCTACTGCTCAATGGGGGTaGGACTGTGGTGTTGGGTTTCTGGGTCTTTGGCTGTACTATGAT +
Preference number: 5 (lower is better)
Translates to: GHKASAIEWATAQWG*DCGVGFLGLWLYYD
Trigger: ATCATAGTACAGCCAAAGACCCAGAAACCCAACACCACAGTCCCACCCCCATTGAGCAGTAGCCCACTCTATAGCAGAGGCCTTGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CCA 90 bp TCTTCCAGCATTTTCTGCATGATGTCTATGCCCATCGCCTGCGTCTaGACCCCCTCCACGTTGTTCATCAACCAGTGTACGACCTCAGCA +
Preference number: 5 (lower is better)
Translates to: SSSIFCMMSMPIACV*TPSTLFINQCTTSA
Trigger: TGCTGAGGTCGTACACTGGTTGATGAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGGCATAGACATCATGCAGAAAATGCTGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CTGCCTACCCCACTCCCAGACACTGACTCACTCCCACGGACAATCTGTGCCTCCTGCTTGTCAAACACATaGAATGACAAGTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: LPTPLPDTDSLPRTICASCLSNT*NDKLMA
Trigger: GGCCATCAACTTGTCATTCAATGTGTTTGACAAGCA...GGAGGCACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAAGGATGTTGGTGCTCTaGCCCAGGGAGCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRRMLVL*PRELSS
Trigger: TGATGACAGCTCCCTGGGCAAGAGCACCAACATCCT...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCATCCAGCGCCTTCTGTaGGAGGTGAGCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSIQRLL*EVSFMG
Trigger: GCCCATGAAGCTCACCTCCAACAGAAGGCGCTGGAT...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTATCCAGCGCCTTCTGTaGGAGGTGAGCTTCATGGGC +
Preference number: 5 (lower is better)
Translates to: YTHSWAESRRFCSEYPTAIQRLL*EVSFMG
Trigger: GCCCATGAAGCTCACCTCCAACAGAAGGCGCTGGAT...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTACACCTGTACTGCTGTaGCTAAGCAGGCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: SHGQSVPPPASGTGLARFTPVLL*LSRLTE
Trigger: TTCTGTCAGCCTGCTTAGCAACAGCAGTACAGGTGT...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATCCCTCCTGTCCATGTCTGCTTCTGGGAGGAGATCATAGCAGCCCTCTGTGTATCCTCTAGGGAGTCCTaGTTCTGGGTCCTAGGATTC +
Preference number: 5 (lower is better)
Translates to: IPPVHVCFWEEIIAALCVSSRES*FWVLGF
Trigger: GAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGA...TACACAGAGGGCTGCTATGATCTCCTCCCAGAAGCAGACATGGACAGGAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238200.2
CDS-3UTR CAA 90 bp CAGCCGGTCCGTTCGGTTGTTCACATCAACATCCAGGGTCACAGTCCTCTGCTCTGGCTGTACTATGATTaGGTAACCCTGCATGAGACG +
Preference number: 5 (lower is better)
Translates to: QPVRSVVHINIQGHSPLLWLYYD*VTLHET
Trigger: CGTCTCATGCAGGGTTACCAAATCATAGTACAGCCA...GAGCAGAGGACTGTGACCCTGGATGTTGATGTGAACAACCGAACGGACCGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR CAA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTGGGACTGTGGTGTaGGGTTTCTGGGTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNGGTVV*GFWVFG
Trigger: GCCAAAGACCCAGAAACCCAACACCACAGTCCCACC...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp GTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTGCCTACACCAGAGGAGCTGTTaGGTCCACAGATGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: VPNIPLLVKEKDPNGSCLHQRSC*VHRCLR
Trigger: CCTCAGGCATCTGTGGACCAAACAGCTCCTCTGGTG...TAGGCAGCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000124780.8
CDS-3UTR CAA 90 bp TACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACTGGCATGCTGTAGTCACCAGAGTTaGCAGAGGGAAAGGCCTGTT +
Preference number: 5 (lower is better)
Translates to: YPQPLLREAAWLHGALACCSHQS*QRERPV
Trigger: AACAGGCCTTTCCCTCTGCAAACTCTGGTGACTACA...GCATGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR CAA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTTGGACCCCCTCCACGTaGTTCATCAACCAGTGTACG +
Preference number: 5 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTWTPST*FINQCT
Trigger: CGTACACTGGTTGATGAACAACGTGGAGGGGGTCCA...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTCTCAAACCACTTGCGTaGGAAGCTGGCAAAGTCATC +
Preference number: 5 (lower is better)
Translates to: SHGQSVPPPASGTGLARFLKPLA*EAGKVI
Trigger: GATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAG...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GTTAGGTTTCCTGGAGAGAAGAGAAACAAGGAAGGCTGGACCTGGAGTTGTACAAGGAGCTGTGTCTGCTaGCATAAGAGGCTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: VRFPGEKRNKEGWTWSCTRSCVC*HKRLAG
Trigger: GCCGGCCAGCCTCTTATGCAAGCAGACACAGCTCCT...TGTACAACTCCAGGTCCAGCCTTCCTTGTTTCTCTTCTCTCCAGGAAACCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAGGAGCTGTGTCTGCTaGCATAAGAGGCTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPRSCVC*HKRLAG
Trigger: GCCGGCCAGCCTCTTATGCAAGCAGACACAGCTCCT...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CTCCCAGAGGTCCTGAGTTCAAATCCCAGCAAGCACATGGTGGCTCAGAACCATGCCATCCAGTGTAGCTaGATCTCAAAGGCGGCATTG +
Preference number: 5 (lower is better)
Translates to: LPEVLSSNPSKHMVAQNHAIQCS*ISKAAL
Trigger: CAATGCCGCCTTTGAGATCAAGCTACACTGGATGGC...ATGGTTCTGAGCCACCATGTGCTTGCTGGGATTTGAACTCAGGACCTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAATGACCTTCTCATTCTaGACCCACAGCTCACCAGCC +
Preference number: 5 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRMTFSF*THSSPA
Trigger: GGCTGGTGAGCTGTGGGTCAAGAATGAGAAGGTCAT...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp AACAGCTGCTGTGACCACAGAGGAGGCTGGCATGGAACCCTGAACATACCCATCTCAATCATCCGCTGCTaGGTCAAGATCATGAGTAGG +
Preference number: 5 (lower is better)
Translates to: NSCCDHRGGWHGTLNIPISIIRC*VKIMSR
Trigger: CCTACTCATGATCTTGACCAAGCAGCGGATGATTGA...GATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTGGTCACAGCAGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTCCTCTAGGGAGTCCTaGTTCTGGGTCCTAGGATTC +
Preference number: 5 (lower is better)
Translates to: VQACVDGASGTSNSTPVESSRES*FWVLGF
Trigger: GAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGA...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp GTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTTGCTGGGCTGTCATTaGAACACCCTCCTCATCCCT +
Preference number: 5 (lower is better)
Translates to: VQACVDGASGTSNSTPVELLGCH*NTLLIP
Trigger: AGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCAA...CTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp TTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATACCAAAGGTCTGGTTGTaGCCTCTATCCATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: FTHTCAEAKYQQWPHSLIPKVWL*PLSMGW
Trigger: CCAGCCCATGGATAGAGGCAACAACCAGACCTTTGG...TATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TCTTCGGTCTTTGCCTTCCCTGAGCAGTCTAGAGCGAAAAGCACTCACTGGACGCTCAAACCACTTGCGTaGGAAGCTGGCAAAGTCATC +
Preference number: 5 (lower is better)
Translates to: SSVFAFPEQSRAKSTHWTLKPLA*EAGKVI
Trigger: GATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAG...CGTCCAGTGAGTGCTTTTCGCTCTAGACTGCTCAGGGAAGGCAAAGACCGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCAGCCGGTCCGTTCGGTaGTTCACATCAACATCCAGG +
Preference number: 5 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPSRSVR*FTSTSR
Trigger: CCTGGATGTTGATGTGAACAACCGAACGGACCGGCT...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GCTTGGGACAGTGTCTTACTGTGTGTGTCCTGGAGTGACCTCAAAATCACAGCATGCTGCCCTGAAAACTaGCGTTTGGAGTACGGCAGC +
Preference number: 5 (lower is better)
Translates to: AWDSVLLCVSWSDLKITACCPEN*RLEYGS
Trigger: GCTGCCGTACTCCAAACGCAAGTTTTCAGGGCAGCA...TGCTGTGATTTTGAGGTCACTCCAGGACACACACAGTAAGACACTGTCCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp GTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTGCCTAATGACCTTCTCATTCTaGACCCACAGCTCACCAGCC +
Preference number: 5 (lower is better)
Translates to: VPNIPLLVKEKDPNGSCLMTFSF*THSSPA
Trigger: GGCTGGTGAGCTGTGGGTCAAGAATGAGAAGGTCAT...TAGGCAGCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp AGGGACAGGATTGGCAAGATTTGGTTGGCGGTAGCGGCAGCAGCTGCTTCCAATCTCCGGTTATGTAGCTaGAATAATGGCACAGCATGT +
Preference number: 5 (lower is better)
Translates to: RDRIGKIWLAVAAAAASNLRLCS*NNGTAC
Trigger: ACATGCTGTGCCATTATTCAAGCTACATAACCGGAG...ATTGGAAGCAGCTGCTGCCGCTACCGCCAACCAAATCTTGCCAATCCTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp GCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATGGAGCACTGGCAGTATCACGACCATTTTaGGTTTTCTCAGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: AYPQPLLREAAWLHGALAVSRPF*VFSEAD
Trigger: GTCTGCCTCTGAGAAAACCAAAAATGGTCGTGATAC...TGCCAGTGCTCCATGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR CAA 90 bp TCCCACGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGTATCACGACCATTTTaGGTTTTCTCAGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SHGQSVPPPASGTGLARFVSRPF*VFSEAD
Trigger: GTCTGCCTCTGAGAAAACCAAAAATGGTCGTGATAC...AAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAAGGCAGCCTGAACACTaGAGCATCGTAGGCATCATA +
Preference number: 5 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRRQPEH*SIVGII
Trigger: TATGATGCCTACGATGCTCAAGTGTTCAGGCTGCCT...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGTCCTCTAGGGAGTCCTaGTTCTGGGTCCTAGGATTC +
Preference number: 5 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLSSRES*FWVLGF
Trigger: GAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGA...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCTTGCTGGGCTGTCATTaGAACACCCTCCTCATCCCT +
Preference number: 5 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPLLGCH*NTLLIP
Trigger: AGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCAA...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTTGCTGGGCTGTCATTaGAACACCCTCCTCATCCCT +
Preference number: 5 (lower is better)
Translates to: LIHTLLGRKQEVLFRISHLLGCH*NTLLIP
Trigger: AGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCAA...GTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGGAACTCTTCAAACACTaGCTGGGCTGTCATTTGAAC +
Preference number: 5 (lower is better)
Translates to: RTICASPCFRDRIGKIWLELFKH*LGCHLN
Trigger: GTTCAAATGACAGCCCAGCAAGTGTTTGAAGAGTTC...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CTGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGGGTGGGACTGTGGTGTaGGGTTTCTGGGTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: LLPIFLFTHTCAEAKYQQGGTVV*GFWVFG
Trigger: GCCAAAGACCCAGAAACCCAACACCACAGTCCCACC...CTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCTTCCCAAAGGTCTGGTaGTTGCCTCTATCCATGGGC +
Preference number: 5 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPFPKVW*LPLSMG
Trigger: GCCCATGGATAGAGGCAACAACCAGACCTTTGGGAA...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCTGGACCCCCTCCACGTaGTTCATCAACCAGTGTACG +
Preference number: 5 (lower is better)
Translates to: HRFTSYTHSWAESRRFCSWTPST*FINQCT
Trigger: CGTACACTGGTTGATGAACAACGTGGAGGGGGTCCA...GGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TGCAAAAGAAGGTCAGAAGAGGGTGTGGAGTCCCCTGGAACTCCAGGTATGGATCTCAAACCACTTGCGTaGGAAGCTGGCAAAGTCATC +
Preference number: 5 (lower is better)
Translates to: CKRRSEEGVESPGTPGMDLKPLA*EAGKVI
Trigger: GATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAG...ATCCATACCTGGAGTTCCAGGGGACTCCACACCCTCTTCTGACCTTCTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp ATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATAAGGAGCTGTGTCTGCTaGCATAAGAGGCTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: IYLIHTLLGRKQEVLFRIRSCVC*HKRLAG
Trigger: GCCGGCCAGCCTCTTATGCAAGCAGACACAGCTCCT...TATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGTGCTGCCCTGAAAACTaGCGTTTGGAGTACGGCAGC +
Preference number: 5 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPCCPEN*RLEYGS
Trigger: GCTGCCGTACTCCAAACGCAAGTTTTCAGGGCAGCA...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTAGTCGGTTGTCACGGTaGATGCAGAAATCCGTGAAG +
Preference number: 5 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTSRLSR*MQKSVK
Trigger: CTTCACGGATTTCTGCATCAACCGTGACAACCGACT...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CCA 90 bp TTGAGTGTCACCTTATGGAAAGTTCTGCCCATACTTAACCAATACTaGCCTTCCTCCTCAGGGCGATTTCGGGACACAAGGCCTCTGCTA +
Preference number: 5 (lower is better)
Translates to: LSVTLWKVLPILNQY*PSSSGRFRDTRPLL
Trigger: TAGCAGAGGCCTTGTGTCCCGAAATCGCCCTGAGGAGGAAGGCCAGTATTGGTTAAGTATGGGCAGAACTTTCCATAAGGTGACACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACTGCAGGAACTGGAGCTCAAGGCCAGGAGCATCTCAGGACAGCTGATAGGCAACTTAAGCGACTTGACTaGCAAAAGCAAAGGACTGTA +
Preference number: 5 (lower is better)
Translates to: TAGTGAQGQEHLRTADRQLKRLD*QKQRTV
Trigger: TACAGTCCTTTGCTTTTGCAAGTCAAGTCGCTTAAG...TTGCCTATCAGCTGTCCTGAGATGCTCCTGGCCTTGAGCTCCAGTTCCTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp CGGACAATCTGTGCCTCCCCCTGCTTCAGGGACAGGATTGGCAAGATTTGGTTGCTTAAGCGACTTGACTaGCAAAAGCAAAGGACTGTA +
Preference number: 5 (lower is better)
Translates to: RTICASPCFRDRIGKIWLLKRLD*QKQRTV
Trigger: TACAGTCCTTTGCTTTTGCAAGTCAAGTCGCTTAAG...CAACCAAATCTTGCCAATCCTGTCCCTGAAGCAGGGGGAGGCACAGATTGTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp AAGGCCAGCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCATCTTCCTTAAGCGACTaGACTTGCAAAAGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: KASSSIPTASLKRSSLASSSLSD*TCKSKG
Trigger: TCCTTTGCTTTTGCAAGTCAAGTCGCTTAAGGAAGA...TGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGCTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR CAA 90 bp CACAGAGGAGGCTGGCATGGAACCCTGAACATACCCATCTGGGAAAACGAGAACTCAAGAGTCACATCCTaGGGGTCTACAACATTCACA +
Preference number: 5 (lower is better)
Translates to: HRGGWHGTLNIPIWENENSRVTS*GSTTFT
Trigger: TGTGAATGTTGTAGACCCCAAGGATGTGACTCTTGA...GTTCTCGTTTTCCCAGATGGGTATGTTCAGGGTTCCATGCCAGCCTCCTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp CTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGGGCATCATAATCTACTaGGATGGGAAGGGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: LFTHTCAEAKYQQWPHSLGIIIY*DGKGVF
Trigger: GAAAACACCCTTCCCATCCAAGTAGATTATGATGCC...CAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp TCACGGTTGATGCAGAAATCCGTGAAGTCCTTCAGCAGCCGATCAGCAAACTTCAGGCAGCCTGAACACTaGAGCATCGTAGGCATCATA +
Preference number: 5 (lower is better)
Translates to: SRLMQKSVKSFSSRSANFRQPEH*SIVGII
Trigger: TATGATGCCTACGATGCTCAAGTGTTCAGGCTGCCT...GAAGTTTGCTGATCGGCTGCTGAAGGACTTCACGGATTTCTGCATCAACCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR CAA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGACACCTGTACTGCTGTaGCTAAGCAGGCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLTPVLL*LSRLTE
Trigger: TTCTGTCAGCCTGCTTAGCAACAGCAGTACAGGTGT...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGTTGCTGGGCTGTCATTaGAACACCCTCCTCATCCCT +
Preference number: 5 (lower is better)
Translates to: TDLPHTHTLGQKAGGSVPLLGCH*NTLLIP
Trigger: AGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCAA...CGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp AGCACTGGCATGCATCTTCTCCAGGCAGTTTGTCCAGAACGTGACCAGTCGGTTGAACTCTTCAAACACTaGCTGGGCTGTCATTTGAAC +
Preference number: 5 (lower is better)
Translates to: STGMHLLQAVCPERDQSVELFKH*LGCHLN
Trigger: GTTCAAATGACAGCCCAGCAAGTGTTTGAAGAGTTC...AACCGACTGGTCACGTTCTGGACAAACTGCCTGGAGAAGATGCATGCCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000124780.8
CDS-3UTR CAA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCAAAGGTCTGGTTGTaGCCTCTATCCATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGPKVWL*PLSMGW
Trigger: CCAGCCCATGGATAGAGGCAACAACCAGACCTTTGG...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACGATGTTAGAGAGCTaGCTACATGCTGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPTMLES*LHAAES
Trigger: GCTCTCAGCAGCATGTAGCAAGCTCTCTAACATCGT...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGATACTCAAACCACTTGCGTaGGAAGCTGGCAAAGTCATC +
Preference number: 5 (lower is better)
Translates to: FTHTCAEAKYQQWPHSLILKPLA*EAGKVI
Trigger: GATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAG...TATCAGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAAGGAGCTGTGTCTGCTaGCATAAGAGGCTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTRSCVC*HKRLAG
Trigger: GCCGGCCAGCCTCTTATGCAAGCAGACACAGCTCCT...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTCTCACAGAACATGTTTaGGTTGGTGGAGCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTLTEHV*VGGAGR
Trigger: TCTACCAGCTCCACCAACCAAAACATGTTCTGTGAG...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGAACGTGACCAGTCGGTaGTCACGGTTGATGCAGAAA +
Preference number: 5 (lower is better)
Translates to: HTHTLGQKAGGSVPNIPLNVTSR*SRLMQK
Trigger: TTTCTGCATCAACCGTGACAACCGACTGGTCACGTT...CAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp AAGGCCAGCTCCAGCATACCCACAGCCTCTCTTAAGAGAAGCAGCCTGGCTTCAAGCAAATTCCACTTTTaGAGTGATATAGGCACAGGT +
Preference number: 5 (lower is better)
Translates to: KASSSIPTASLKRSSLASSKFHF*SDIGTG
Trigger: ACCTGTGCCTATATCACTCAAAAAGTGGAATTTGCT...TGAAGCCAGGCTGCTTCTCTTAAGAGAGGCTGTGGGTATGCTGGAGCTGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR CAA 90 bp CTGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGATGACCTTCTCATTCTaGACCCACAGCTCACCAGCC +
Preference number: 5 (lower is better)
Translates to: LLPIFLFTHTCAEAKYQQMTFSF*THSSPA
Trigger: GGCTGGTGAGCTGTGGGTCAAGAATGAGAAGGTCAT...CTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATTCAATCATCCGCTGCTaGGTCAAGATCATGAGTAGG +
Preference number: 5 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNSIIRC*VKIMSR
Trigger: CCTACTCATGATCTTGACCAAGCAGCGGATGATTGA...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTCTCCGGTTATGTAGCTaGAATAATGGCACAGCATGT +
Preference number: 5 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTLRLCS*NNGTAC
Trigger: ACATGCTGTGCCATTATTCAAGCTACATAACCGGAG...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp CCAGAACGTGACCAGTCGGTTGTCACGGTTGATGCAGAAATCCGTGAAGTCCTTGGCATCATAATCTACTaGGATGGGAAGGGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: PERDQSVVTVDAEIREVLGIIIY*DGKGVF
Trigger: GAAAACACCCTTCCCATCCAAGTAGATTATGATGCC...AAGGACTTCACGGATTTCTGCATCAACCGTGACAACCGACTGGTCACGTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS-3UTR CAA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTAGACATCACAGGAGCTaGCACTTTTGCGACTGTGAT +
Preference number: 5 (lower is better)
Translates to: YTHSWAESRRFCSEYPTARHHRS*HFCDCD
Trigger: ATCACAGTCGCAAAAGTGCAAGCTCCTGTGATGTCT...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTACACCTGTACTGCTGTaGCTAAGCAGGCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGTPVLL*LSRLTE
Trigger: TTCTGTCAGCCTGCTTAGCAACAGCAGTACAGGTGT...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTGAACTCTTCAAACACTaGCTGGGCTGTCATTTGAAC +
Preference number: 5 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTELFKH*LGCHLN
Trigger: GTTCAAATGACAGCCCAGCAAGTGTTTGAAGAGTTC...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCTGGCTGTACTATGATTaGGTAACCCTGCATGAGACG +
Preference number: 5 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPWLYYD*VTLHET
Trigger: CGTCTCATGCAGGGTTACCAAATCATAGTACAGCCA...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACGGTGGGACTGTGGTGTaGGGTTTCTGGGTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYGGTVV*GFWVFG
Trigger: GCCAAAGACCCAGAAACCCAACACCACAGTCCCACC...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACACCAAAGGTCTGGTTGTaGCCTCTATCCATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTPKVWL*PLSMGW
Trigger: CCAGCCCATGGATAGAGGCAACAACCAGACCTTTGG...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAACGATGTTAGAGAGCTaGCTACATGCTGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: QIYLIHTLLGRKQEVLFRTMLES*LHAAES
Trigger: GCTCTCAGCAGCATGTAGCAAGCTCTCTAACATCGT...TCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGCCACCTCAAACCACTaGCGTTGGAAGCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: CFQSFSSLTLVQRPNISSATSNH*RWKLAK
Trigger: CTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGC...ACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGACTTAAGCGACTTGACTaGCAAAAGCAAAGGACTGTA +
Preference number: 5 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRLKRLD*QKQRTV
Trigger: TACAGTCCTTTGCTTTTGCAAGTCAAGTCGCTTAAG...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp TCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCACTCACTTGCTTGTCAAACACATaGAATGACAAGTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: SLHSHLCRGQISAVAPLTCLSNT*NDKLMA
Trigger: GGCCATCAACTTGTCATTCAATGTGTTTGACAAGCA...AGTGAGTGGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp ACTGTACTGTACTGTCTGCTCAGTAGTCCTGTCCTGTCCAGAAGATCCTTGTTCTCAATCATCCGCTGCTaGGTCAAGATCATGAGTAGG +
Preference number: 5 (lower is better)
Translates to: TVLYCLLSSPVLSRRSLFSIIRC*VKIMSR
Trigger: CCTACTCATGATCTTGACCAAGCAGCGGATGATTGA...GAACAAGGATCTTCTGGACAGGACAGGACTACTGAGCAGACAGTACAGTACAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATCTCCGGTTATGTAGCTaGAATAATGGCACAGCATGT +
Preference number: 5 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNLRLCS*NNGTAC
Trigger: ACATGCTGTGCCATTATTCAAGCTACATAACCGGAG...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTCTCCGGTTATGTAGCTaGAATAATGGCACAGCATGT +
Preference number: 5 (lower is better)
Translates to: YTHSWAESRRFCSEYPTALRLCS*NNGTAC
Trigger: ACATGCTGTGCCATTATTCAAGCTACATAACCGGAG...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGTATCACGACCATTTTaGGTTTTCTCAGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNVSRPF*VFSEAD
Trigger: GTCTGCCTCTGAGAAAACCAAAAATGGTCGTGATAC...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp GAGCTTCTTACTATACTGTACTGTACTGTCTGCTCAGTAGTCCTGTCCTGTCCAAGGCAGCCTGAACACTaGAGCATCGTAGGCATCATA +
Preference number: 5 (lower is better)
Translates to: ELLTILYCTVCSVVLSCPRQPEH*SIVGII
Trigger: TATGATGCCTACGATGCTCAAGTGTTCAGGCTGCCT...TGGACAGGACAGGACTACTGAGCAGACAGTACAGTACAGTATAGTAAGAAGCTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTAGACATCACAGGAGCTaGCACTTTTGCGACTGTGAT +
Preference number: 5 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGRHHRS*HFCDCD
Trigger: ATCACAGTCGCAAAAGTGCAAGCTCCTGTGATGTCT...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTAGACATCACAGGAGCTaGCACTTTTGCGACTGTGAT +
Preference number: 5 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVRHHRS*HFCDCD
Trigger: ATCACAGTCGCAAAAGTGCAAGCTCCTGTGATGTCT...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp TGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTTTGCTGGGCTGTCATTaGAACACCCTCCTCATCCCT +
Preference number: 5 (lower is better)
Translates to: CFQSFSSLTLVQRPNISSLLGCH*NTLLIP
Trigger: AGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCAA...ACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTTGGCTGTACTATGATTaGGTAACCCTGCATGAGACG +
Preference number: 5 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGWLYYD*VTLHET
Trigger: CGTCTCATGCAGGGTTACCAAATCATAGTACAGCCA...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp AAGCGGAGACAGAATATTTATCTTGCACAAATCCAAACCTGTGTGCAATGGCTTCACCAGAGGAGCTGTTaGGTCCACAGATGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: KRRQNIYLAQIQTCVQWLHQRSC*VHRCLR
Trigger: CCTCAGGCATCTGTGGACCAAACAGCTCCTCTGGTG...AAGCCATTGCACACAGGTTTGGATTTGTGCAAGATAAATATTCTGTCTCCGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS-3UTR CAA 90 bp CACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCTTCCCAAAGGTCTGGTaGTTGCCTCTATCCATGGGC +
Preference number: 5 (lower is better)
Translates to: HICTAGVSQWYIMPQIYLFPKVW*LPLSMG
Trigger: GCCCATGGATAGAGGCAACAACCAGACCTTTGGGAA...GAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACGCCACCTCAAACCACTaGCGTTGGAAGCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYATSNH*RWKLAK
Trigger: CTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGC...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAGCCACCTCAAACCACTaGCGTTGGAAGCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTATSNH*RWKLAK
Trigger: CTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGC...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAAGCCGGTCCGTTCGGTaGTTCACATCAACATCCAGG +
Preference number: 5 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTSRSVR*FTSTSR
Trigger: CCTGGATGTTGATGTGAACAACCGAACGGACCGGCT...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACAGCCATCCAGTGTAGCTaGATCTCAAAGGCGGCATTG +
Preference number: 5 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTAIQCS*ISKAAL
Trigger: CAATGCCGCCTTTGAGATCAAGCTACACTGGATGGC...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCAACGTGACCAGTCGGTaGTCACGGTTGATGCAGAAA +
Preference number: 5 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGNVTSR*SRLMQK
Trigger: TTTCTGCATCAACCGTGACAACCGACTGGTCACGTT...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS GCA 90 bp GTAGAAATAGAAGCCATAGATGAAGGTCCGCCATGCTTCACCAGATaGATGCGTTATGAGCTGCTCTTCCAGCATTTTCTGCATGATGTC +
Preference number: 5 (lower is better)
Translates to: VEIEAIDEGPPCFTR*MRYELLFQHFLHDV
Trigger: GACATCATGCAGAAAATGCTGGAAGAGCAGCTCATAACGCATGCATCTGGTGAAGCATGGCGGACCTTCATCTATGGCTTCTATTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTCTTAAGCGACTTGACTaGCAAAAGCAAAGGACTGTA +
Preference number: 5 (lower is better)
Translates to: YTHSWAESRRFCSEYPTALKRLD*QKQRTV
Trigger: TACAGTCCTTTGCTTTTGCAAGTCAAGTCGCTTAAG...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTTCAAGAGTCACATCCTaGGGGTCTACAACATTCACA +
Preference number: 5 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGSRVTS*GSTTFT
Trigger: TGTGAATGTTGTAGACCCCAAGGATGTGACTCTTGA...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp GGTACAGGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGATGTGATCCTCTTGAATaGAAGCTCGGTTTATTTCAG +
Preference number: 5 (lower is better)
Translates to: GTGLCGRCFRNFQFHSSRCDPLE*KLGLFQ
Trigger: CTGAAATAAACCGAGCTTCAATTCAAGAGGATCACA...TCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATTGCTTGTCAAACACATaGAATGACAAGTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNCLSNT*NDKLMA
Trigger: GGCCATCAACTTGTCATTCAATGTGTTTGACAAGCA...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTGGCATCATAATCTACTaGGATGGGAAGGGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGGIIIY*DGKGVF
Trigger: GAAAACACCCTTCCCATCCAAGTAGATTATGATGCC...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp AGATTCTGCTATGTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGAGGATGTTGGTGCTCTaGCCCAGGGAGCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: RFCYVHICTAGVSQWYIMRMLVL*PRELSS
Trigger: TGATGACAGCTCCCTGGGCAAGAGCACCAACATCCT...CATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTACATAGCAGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp ATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATAACACCTGTACTGCTGTaGCTAAGCAGGCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: IYLIHTLLGRKQEVLFRITPVLL*LSRLTE
Trigger: TTCTGTCAGCCTGCTTAGCAACAGCAGTACAGGTGT...TATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACATCCTCTAGGGAGTCCTaGTTCTGGGTCCTAGGATTC +
Preference number: 5 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTSSRES*FWVLGF
Trigger: GAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGA...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTGAACTCTTCAAACACTaGCTGGGCTGTCATTTGAAC +
Preference number: 5 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGELFKH*LGCHLN
Trigger: GTTCAAATGACAGCCCAGCAAGTGTTTGAAGAGTTC...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp CTGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCTGTACTATGATTaGGTAACCCTGCATGAGACG +
Preference number: 5 (lower is better)
Translates to: LLPIFLFTHTCAEAKYQQWLYYD*VTLHET
Trigger: CGTCTCATGCAGGGTTACCAAATCATAGTACAGCCA...CTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GGCTTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGTTACTGTGATCATCTaGTCCTTGAGTGTCACCTTA +
Preference number: 5 (lower is better)
Translates to: GLCGRCFRNFQFHSSRVNVTVII*SLSVTL
Trigger: TAAGGTGACACTCAAGGACAAGATGATCACAGTAAC...ATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp TACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCCCACTGCTGTTACTGTGATCATCTaGTCCTTGAGTGTCACCTTA +
Preference number: 5 (lower is better)
Translates to: YTHSWAESRRFCSEYPTAVTVII*SLSVTL
Trigger: TAAGGTGACACTCAAGGACAAGATGATCACAGTAAC...AGCAGTGGGATATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACATTCCCAAAGGTCTGGTaGTTGCCTCTATCCATGGGC +
Preference number: 5 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTFPKVW*LPLSMG
Trigger: GCCCATGGATAGAGGCAACAACCAGACCTTTGGGAA...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTTGTAGTCACCAGAGTTaGCAGAGGGAAAGGCCTGTT +
Preference number: 5 (lower is better)
Translates to: CFQSFSSLTLVQRPNISSCSHQS*QRERPV
Trigger: AACAGGCCTTTCCCTCTGCAAACTCTGGTGACTACA...ACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATGTAGTCACCAGAGTTaGCAGAGGGAAAGGCCTGTT +
Preference number: 5 (lower is better)
Translates to: IYLIHTLLGRKQEVLFRICSHQS*QRERPV
Trigger: AACAGGCCTTTCCCTCTGCAAACTCTGGTGACTACA...TATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TGCTTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTACGATGTTAGAGAGCTaGCTACATGCTGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: CFQSFSSLTLVQRPNISSTMLES*LHAAES
Trigger: GCTCTCAGCAGCATGTAGCAAGCTCTCTAACATCGT...ACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATATGGACCCCCTCCACGTaGTTCATCAACCAGTGTACG +
Preference number: 5 (lower is better)
Translates to: ICTAGVSQWYIMPQIYLIWTPST*FINQCT
Trigger: CGTACACTGGTTGATGAACAACGTGGAGGGGGTCCA...TATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACACTCAAACCACTTGCGTaGGAAGCTGGCAAAGTCATC +
Preference number: 5 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTLKPLA*EAGKVI
Trigger: GATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAG...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATAGCCACCTCAAACCACTaGCGTTGGAAGCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: ICTAGVSQWYIMPQIYLIATSNH*RWKLAK
Trigger: CTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGC...TATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACAGCCATCCAGTGTAGCTaGATCTCAAAGGCGGCATTG +
Preference number: 5 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTAIQCS*ISKAAL
Trigger: CAATGCCGCCTTTGAGATCAAGCTACACTGGATGGC...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCAGAACATGTTTTGGTaGGTGGAGCTGGTAGAGTTC +
Preference number: 5 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGQNMFW*VELVEF
Trigger: GAACTCTACCAGCTCCACCAACCAAAACATGTTCTG...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACAAGTCGGTTGTCACGGTaGATGCAGAAATCCGTGAAG +
Preference number: 5 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTSRLSR*MQKSVK
Trigger: CTTCACGGATTTCTGCATCAACCGTGACAACCGACT...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCAACGTGACCAGTCGGTaGTCACGGTTGATGCAGAAA +
Preference number: 5 (lower is better)
Translates to: HICTAGVSQWYIMPQIYLNVTSR*SRLMQK
Trigger: TTTCTGCATCAACCGTGACAACCGACTGGTCACGTT...GAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTTCTTCCTTAAGCGACTaGACTTGCAAAAGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGSSLSD*TCKSKG
Trigger: TCCTTTGCTTTTGCAAGTCAAGTCGCTTAAGGAAGA...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp TTGGATGGGAAGGGTGTTTTCAGATTCCTTTGGAGTCCCGAGAGATGTATCACGTCTTCCTTAAGCGACTaGACTTGCAAAAGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: LDGKGVFRFLWSPERCITSSLSD*TCKSKG
Trigger: TCCTTTGCTTTTGCAAGTCAAGTCGCTTAAGGAAGA...CGTGATACATCTCTCGGGACTCCAAAGGAATCTGAAAACACCCTTCCCATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR CAA 90 bp GATGGGAAGGGTGTTTTCAGATTCCTTTGGAGTCCCGAGAGATGTATCACGACCAGCAAATTCCACTTTTaGAGTGATATAGGCACAGGT +
Preference number: 5 (lower is better)
Translates to: DGKGVFRFLWSPERCITTSKFHF*SDIGTG
Trigger: ACCTGTGCCTATATCACTCAAAAAGTGGAATTTGCT...GGTCGTGATACATCTCTCGGGACTCCAAAGGAATCTGAAAACACCCTTCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR CAA 90 bp CAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCCCCTGTGATCCTCTTGAATaGAAGCTCGGTTTATTTCAG +
Preference number: 5 (lower is better)
Translates to: QSFSSLTLVQRPNISSGPCDPLE*KLGLFQ
Trigger: CTGAAATAAACCGAGCTTCAATTCAAGAGGATCACA...GGGGCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp GGTTCTGTTCCGAATATCCCACTGCTGGTGAAGGAAAAGGACCCTAATGGAAGCTGTGATCCTCTTGAATaGAAGCTCGGTTTATTTCAG +
Preference number: 5 (lower is better)
Translates to: GSVPNIPLLVKEKDPNGSCDPLE*KLGLFQ
Trigger: CTGAAATAAACCGAGCTTCAATTCAAGAGGATCACA...GCTTCCATTAGGGTCCTTTTCCTTCACCAGCAGTGGGATATTCGGAACAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp ATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATCAATCATCCGCTGCTaGGTCAAGATCATGAGTAGG +
Preference number: 5 (lower is better)
Translates to: IYLIHTLLGRKQEVLFRISIIRC*VKIMSR
Trigger: CCTACTCATGATCTTGACCAAGCAGCGGATGATTGA...TATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp AGCCTAGAGCTTCTTACTATACTGTACTGTACTGTCTGCTCAGTAGTCCTGTCCGGCATCATAATCTACTaGGATGGGAAGGGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: SLELLTILYCTVCSVVLSGIIIY*DGKGVF
Trigger: GAAAACACCCTTCCCATCCAAGTAGATTATGATGCC...GGACAGGACTACTGAGCAGACAGTACAGTACAGTATAGTAAGAAGCTCTAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp CACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCAGACATCACAGGAGCTaGCACTTTTGCGACTGTGAT +
Preference number: 5 (lower is better)
Translates to: HICTAGVSQWYIMPQIYLRHHRS*HFCDCD
Trigger: ATCACAGTCGCAAAAGTGCAAGCTCCTGTGATGTCT...GAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp ATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATATCCTCTAGGGAGTCCTaGTTCTGGGTCCTAGGATTC +
Preference number: 5 (lower is better)
Translates to: ICTAGVSQWYIMPQIYLISSRES*FWVLGF
Trigger: GAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGA...TATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp TTCCAATCTTTCTCTTCACTCACACTTGTGCAGAGGCCAAATATCAGCAGTGGCGAACTCTTCAAACACTaGCTGGGCTGTCATTTGAAC +
Preference number: 5 (lower is better)
Translates to: FQSFSSLTLVQRPNISSGELFKH*LGCHLN
Trigger: GTTCAAATGACAGCCCAGCAAGTGTTTGAAGAGTTC...GCCACTGCTGATATTTGGCCTCTGCACAAGTGTGAGTGAAGAGAAAGATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACATGGCTGTACTATGATTaGGTAACCCTGCATGAGACG +
Preference number: 5 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTWLYYD*VTLHET
Trigger: CGTCTCATGCAGGGTTACCAAATCATAGTACAGCCA...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAGTTACTGTGATCATCTaGTCCTTGAGTGTCACCTTA +
Preference number: 5 (lower is better)
Translates to: QIYLIHTLLGRKQEVLFRVTVII*SLSVTL
Trigger: TAAGGTGACACTCAAGGACAAGATGATCACAGTAAC...TCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTGTTACTGTGATCATCTaGTCCTTGAGTGTCACCTTA +
Preference number: 5 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVVTVII*SLSVTL
Trigger: TAAGGTGACACTCAAGGACAAGATGATCACAGTAAC...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACACGATGTTAGAGAGCTaGCTACATGCTGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYTMLES*LHAAES
Trigger: GCTCTCAGCAGCATGTAGCAAGCTCTCTAACATCGT...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp CACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCCTCACAGAACATGTTTaGGTTGGTGGAGCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: HICTAGVSQWYIMPQIYLLTEHV*VGGAGR
Trigger: TCTACCAGCTCCACCAACCAAAACATGTTCTGTGAG...GAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATCTACTTGGATGGGAAGGGTGTTTTCAGATTCCTTTGGAGTCCCGAGAGATGTCTTAAGCGACTTGACTaGCAAAAGCAAAGGACTGTA +
Preference number: 5 (lower is better)
Translates to: IYLDGKGVFRFLWSPERCLKRLD*QKQRTV
Trigger: TACAGTCCTTTGCTTTTGCAAGTCAAGTCGCTTAAG...ACATCTCTCGGGACTCCAAAGGAATCTGAAAACACCCTTCCCATCCAAGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR CAA 90 bp TCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTGCGGTTCTTCCTTAAGCGACTaGACTTGCAAAAGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: SKSQQPSSLSFSLLKCCGSSLSD*TCKSKG
Trigger: TCCTTTGCTTTTGCAAGTCAAGTCGCTTAAGGAAGA...ACCGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp ACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACACACATCAAGAGTCACATCCTaGGGGTCTACAACATTCACA +
Preference number: 5 (lower is better)
Translates to: TAGVSQWYIMPQIYLIHTSRVTS*GSTTFT
Trigger: TGTGAATGTTGTAGACCCCAAGGATGTGACTCTTGA...TGTGTGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp TTGTGTGGACGGTGCTTCAGGAACTTCCAATTCCACTCCAGTAGAGTGAATGGTAGCAAATTCCACTTTTaGAGTGATATAGGCACAGGT +
Preference number: 5 (lower is better)
Translates to: LCGRCFRNFQFHSSRVNGSKFHF*SDIGTG
Trigger: ACCTGTGCCTATATCACTCAAAAAGTGGAATTTGCT...ACCATTCACTCTACTGGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS-3UTR CAA 90 bp GCCACAGATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTAGCAAATTCCACTTTTaGAGTGATATAGGCACAGGT +
Preference number: 5 (lower is better)
Translates to: ATDLPHTHTLGQKAGGSVSKFHF*SDIGTG
Trigger: ACCTGTGCCTATATCACTCAAAAAGTGGAATTTGCT...AACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAATCTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp ATAATCTACTTGGATGGGAAGGGTGTTTTCAGATTCCTTTGGAGTCCCGAGAGACTCCGGTTATGTAGCTaGAATAATGGCACAGCATGT +
Preference number: 5 (lower is better)
Translates to: IIYLDGKGVFRFLWSPERLRLCS*NNGTAC
Trigger: ACATGCTGTGCCATTATTCAAGCTACATAACCGGAG...TCTCTCGGGACTCCAAAGGAATCTGAAAACACCCTTCCCATCCAAGTAGATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201836.2
CDS-3UTR CAA 90 bp AGAACAATAAATTGGCCTTTATTCTGCTTCTCTCCGGCTGTTTTCTATCCACTTTCCTCTAGGGAGTCCTaGTTCTGGGTCCTAGGATTC +
Preference number: 5 (lower is better)
Translates to: RTINWPLFCFSPAVFYPLSSRES*FWVLGF
Trigger: GAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGA...AAGTGGATAGAAAACAGCCGGAGAGAAGCAGAATAAAGGCCAATTTATTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp ATCAGTCAAATGCTCTTAACTGAGTCATCTTTCCAGCCCCAAAGTGAGACTTTCTGGCTGTACTATGATTaGGTAACCCTGCATGAGACG +
Preference number: 5 (lower is better)
Translates to: ISQMLLTESSFQPQSETFWLYYD*VTLHET
Trigger: CGTCTCATGCAGGGTTACCAAATCATAGTACAGCCA...GAAAGTCTCACTTTGGGGCTGGAAAGATGACTCAGTTAAGAGCATTTGACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS-3UTR CAA 90 bp TCAAAATCACAGCAACCTTCTTCCCTCTCCTTTAGTCTTCTCAAGTGCTGCGGTGTTACTGTGATCATCTaGTCCTTGAGTGTCACCTTA +
Preference number: 5 (lower is better)
Translates to: SKSQQPSSLSFSLLKCCGVTVII*SLSVTL
Trigger: TAAGGTGACACTCAAGGACAAGATGATCACAGTAAC...ACCGCAGCACTTGAGAAGACTAAAGGAGAGGGAAGAAGGTTGCTGTGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS GCA 90 bp CATTACTATCTTGTAGAAATAGAAGCCATAGATGAAGGTCCGCCATaGTTCACCAGATGCATGCGTTATGAGCTGCTCTTCCAGCATTTT +
Preference number: 5 (lower is better)
Translates to: HYYLVEIEAIDEGPP*FTRCMRYELLFQHF
Trigger: AAAATGCTGGAAGAGCAGCTCATAACGCATGCATCTGGTGAAGCATGGCGGACCTTCATCTATGGCTTCTATTTCTACAAGATAGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACTCAAGAGTCACATCCTaGGGGTCTACAACATTCACA +
Preference number: 5 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYSRVTS*GSTTFT
Trigger: TGTGAATGTTGTAGACCCCAAGGATGTGACTCTTGA...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp GACTTCTTTCCTGCTAGTTTTATCCGTGGAGTGAAACTGTTACAAAAGAGCTGGTCAAGAGTCACATCCTaGGGGTCTACAACATTCACA +
Preference number: 5 (lower is better)
Translates to: DFFPASFIRGVKLLQKSWSRVTS*GSTTFT
Trigger: TGTGAATGTTGTAGACCCCAAGGATGTGACTCTTGA...CCAGCTCTTTTGTAACAGTTTCACTCCACGGATAAAACTAGCAGGAAAGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000195980.5
CDS-3UTR CAA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACGTATCACGACCATTTTaGGTTTTCTCAGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYVSRPF*VFSEAD
Trigger: GTCTGCCTCTGAGAAAACCAAAAATGGTCGTGATAC...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp GTACACATATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACGAACTCTTCAAACACTaGCTGGGCTGTCATTTGAAC +
Preference number: 5 (lower is better)
Translates to: VHICTAGVSQWYIMPQIYELFKH*LGCHLN
Trigger: GTTCAAATGACAGCCCAGCAAGTGTTTGAAGAGTTC...GTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACATATGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS-3UTR CAA 90 bp ATGTACAGCTGGTGTGAGCCAATGGTACATTATGCCACAGATTTACCTCATACATCTTCCTTAAGCGACTaGACTTGCAAAAGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: MYSWCEPMVHYATDLPHTSSLSD*TCKSKG
Trigger: TCCTTTGCTTTTGCAAGTCAAGTCGCTTAAGGAAGA...TGTATGAGGTAAATCTGTGGCATAATGTACCATTGGCTCACACCAGCTGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp ATTTACCTCATACACACACTCTTGGGCAGAAAGCAGGAGGTTCTGTTCCGAATATGTGATCCTCTTGAATaGAAGCTCGGTTTATTTCAG +
Preference number: 5 (lower is better)
Translates to: IYLIHTLLGRKQEVLFRICDPLE*KLGLFQ
Trigger: CTGAAATAAACCGAGCTTCAATTCAAGAGGATCACA...TATTCGGAACAGAACCTCCTGCTTTCTGCCCAAGAGTGTGTGTATGAGGTAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS-3UTR CAA 90 bp AGAACAATAAATTGGCCTTTATTCTGCTTCTCTCCGGCTGTTTTCTATCCACTTAGCAAATTCCACTTTTaGAGTGATATAGGCACAGGT +
Preference number: 5 (lower is better)
Translates to: RTINWPLFCFSPAVFYPLSKFHF*SDIGTG
Trigger: ACCTGTGCCTATATCACTCAAAAAGTGGAATTTGCT...AAGTGGATAGAAAACAGCCGGAGAGAAGCAGAATAAAGGCCAATTTATTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
CDS TCA 72 bp TACCAGGGGGCAGAGGGCTGCTGCATAGCCACTGCATaGTGTCTATGCCCATCGCCTGCGTCTGGACCCCCT +
Preference number: 6 (lower is better)
Translates to: YQGAEGCCIATA*CLCPSPASGPP
Trigger: AGGGGGTCCAGACGCAGGCGATGGGCATAGACATCATGCAGTGGCTATGCAGCAGCCCTCTGCCCCCTGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS GCA 72 bp TCCAACAGCTCTGCAGAGGAGTGGGTAGGGTCCCTCTaGCTGCTGCCCTGCAGCTCTGCCATGTTTTGCCGG +
Preference number: 6 (lower is better)
Translates to: SNSSAEEWVGSL*LLPCSSAMFCR
Trigger: CCGGCAAAACATGGCAGAGCTGCAGGGCAGCAGGCAGAGGGACCCTACCCACTCCTCTGCAGAGCTGTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CCA 72 bp GGCTGGCGGGAAGTGCTGTGCCTCCCGGCAGCTTCATaGTATGCCAACTCCAACAGCTCTGCAGAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: GWREVLCLPAAS*YANSNSSAEEW
Trigger: CCACTCCTCTGCAGAGCTGTTGGAGTTGGCATACCATGAAGCTGCCGGGAGGCACAGCACTTCCCGCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS GCA 72 bp GCGGGAAGTGCTGTGCCTCCCGGCAGCTTCATGGTATaGCAACTCCAACAGCTCTGCAGAGGAGTGGGTAGG +
Preference number: 6 (lower is better)
Translates to: AGSAVPPGSFMV*QLQQLCRGVGR
Trigger: CCTACCCACTCCTCTGCAGAGCTGTTGGAGTTGGCATACCATGAAGCTGCCGGGAGGCACAGCACTTCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS GCA 72 bp TGTGTACCAGGGGGCAGAGGGCTGCTGCATAGCCACTaGATGATGTCTATGCCCATCGCCTGCGTCTGGACC +
Preference number: 6 (lower is better)
Translates to: CVPGGRGLLHSH*MMSMPIACVWT
Trigger: GGTCCAGACGCAGGCGATGGGCATAGACATCATGCAGTGGCTATGCAGCAGCCCTCTGCCCCCTGGTACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS CAA 72 bp GGGCCTACAGGAAAAGTGTGCATCCAGCGCCTTCTGTaGGAGGTGAGCTTCATGGGCATCCTCGAGGGGGCG +
Preference number: 6 (lower is better)
Translates to: GPTGKVCIQRLL*EVSFMGILEGA
Trigger: CGCCCCCTCGAGGATGCCCATGAAGCTCACCTCCAACAGAAGGCGCTGGATGCACACTTTTCCTGTAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS TCA 72 bp ATCCTCGAGGGGGCGAAGGGGTTAATCAGCGCTCTCTaGGGCGTGTATCCTCCAGGTCGGACATGGAGCATG +
Preference number: 6 (lower is better)
Translates to: ILEGAKGLISAL*GVYPPGRTWSM
Trigger: CATGCTCCATGTCCGACCTGGAGGATACACGCCTCAGAGAGCGCTGATTAACCCCTTCGCCCCCTCGAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
CDS TCA 72 bp CTGACTAGCTTCCATCTCCAGCAGGGCAGACAGAGCTaGGGTTCCTTTCTTGCCGACTGGAGGGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LTSFHLQQGRQS*GSFLADWRACC
Trigger: GCAGCAGGCCCTCCAGTCGGCAAGAAAGGAACCTCAGCTCTGTCTGCCCTGCTGGAGATGGAAGCTAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000130461.2
ENSMUST00000137169.8
CDS CCA 72 bp GTTCCACTGAAGTTCAAGGACATGCTGTCACCAGGCTaGCGGGAAGTGCTGTGCCTCCCGGCAGCTTCATGG +
Preference number: 6 (lower is better)
Translates to: VPLKFKDMLSPG*REVLCLPAASW
Trigger: CCATGAAGCTGCCGGGAGGCACAGCACTTCCCGCCAGCCTGGTGACAGCATGTCCTTGAACTTCAGTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CCA 72 bp GTGCAGAGATGGGCCCGGTCATCTGCAAGCCTTTCATaGCAGTCCCCTTCCGAATCATGCGGTCTGAGCGGT +
Preference number: 6 (lower is better)
Translates to: VQRWARSSASLS*QSPSESCGLSG
Trigger: ACCGCTCAGACCGCATGATTCGGAAGGGGACTGCCATGAAAGGCTTGCAGATGACCGGGCCCATCTCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000130461.2
ENSMUST00000137169.8
CDS CCA 72 bp AGAAGGCCCCGTCCTTGCGTGGGCTGTCCACATAGGTaGGAGTCATGGCAACACTGCTGTTCTCAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: RRPRPCVGCPHR*ESWQHCCSQLA
Trigger: AGCCAGCTGAGAACAGCAGTGTTGCCATGACTCCCACCTATGTGGACAGCCCACGCAAGGACGGGGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000124780.8
CDS CCA 72 bp TCCCCACTGGTCCCTTGCGTGGGCTGTCCACATAGGTaGGAGTCATGGCAACACTGCTGTTCTCAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: SPLVPCVGCPHR*ESWQHCCSQLA
Trigger: AGCCAGCTGAGAACAGCAGTGTTGCCATGACTCCCACCTATGTGGACAGCCCACGCAAGGGACCAGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130461.2
CDS CAA 90 bp GTGCACAAGCTCTTCTGCCACAAAGGCCACCTCAAACCACTTGCGTaGGAAGCTGGCAAAGTCATCCGCTCCTGCTGTGTACCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: VHKLFCHKGHLKPLA*EAGKVIRSCCVPGG
Trigger: GCCCCCTGGTACACAGCAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGCCTTTGTGGCAGAAGAGCTTGTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS GCA 72 bp AGTTCAAGGACATGCTGTCACCAGGCTGGCGGGAAGTaGTGTGCCTCCCGGCAGCTTCATGGTATGCCAACT +
Preference number: 6 (lower is better)
Translates to: SSRTCCHQAGGK*CASRQLHGMPT
Trigger: AGTTGGCATACCATGAAGCTGCCGGGAGGCACAGCACTTCCCGCCAGCCTGGTGACAGCATGTCCTTGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS GCA 72 bp TCTGCAAGCCTTTCATGGCAGTCCCCTTCCGAATCATaGGGTCTGAGCGGTGGCGCCTGCGGATGCGATTTA +
Preference number: 6 (lower is better)
Translates to: SASLSWQSPSES*GLSGGACGCDL
Trigger: TAAATCGCATCCGCAGGCGCCACCGCTCAGACCGCATGATTCGGAAGGGGACTGCCATGAAAGGCTTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000130461.2
ENSMUST00000137169.8
CDS GCA 72 bp GCCTCGAGAGAGTGTGCAGAGATGGGCCCGGTCATCTaGAAGCCTTTCATGGCAGTCCCCTTCCGAATCATG +
Preference number: 6 (lower is better)
Translates to: ASRECAEMGPVI*KPFMAVPFRIM
Trigger: CATGATTCGGAAGGGGACTGCCATGAAAGGCTTGCAGATGACCGGGCCCATCTCTGCACACTCTCTCGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000130461.2
ENSMUST00000137169.8
CDS CCA 72 bp CCACAAAGGCCACCTCAAACCACTTGCGTTGGAAGCTaGCAAAGTCATCCGCTCCTGCTGTGTACCAGGGGG +
Preference number: 6 (lower is better)
Translates to: PQRPPQTTCVGS*QSHPLLLCTRG
Trigger: CCCCCTGGTACACAGCAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGCCTTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CCA 72 bp GGTCCACAGATGCCTTGCGTGGGCTGTCCACATAGGTaGGAGTCATGGCAACACTGCTGTTCTCAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: GPQMPCVGCPHR*ESWQHCCSQLA
Trigger: AGCCAGCTGAGAACAGCAGTGTTGCCATGACTCCCACCTATGTGGACAGCCCACGCAAGGCATCTGTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CAA 72 bp ACACCTACAGGAAAAGTGTGCATCCAGCGCCTTCTGTaGGAGGTGAGCTTCATGGGCATCCTCGAGGGGGCG +
Preference number: 6 (lower is better)
Translates to: TPTGKVCIQRLL*EVSFMGILEGA
Trigger: CGCCCCCTCGAGGATGCCCATGAAGCTCACCTCCAACAGAAGGCGCTGGATGCACACTTTTCCTGTAGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS TCA 72 bp CCGTGCACAGTCGTCTGCTGTTCTCCTAGGCTCTTCTaGCTAGCTTCCATCTCCAGCAGGGCAGACAGAGCT +
Preference number: 6 (lower is better)
Translates to: PCTVVCCSPRLF*LASISSRADRA
Trigger: AGCTCTGTCTGCCCTGCTGGAGATGGAAGCTAGTCAGAAGAGCCTAGGAGAACAGCAGACGACTGTGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS TCA 72 bp CCAGTGTACGACCTCAGCACTGATGAAGCAGCACGGTaGAAGGCCCTTCTGTTCAGACAGCAGCTGGACTCC +
Preference number: 6 (lower is better)
Translates to: PVYDLSTDEAAR*KALLFRQQLDS
Trigger: GGAGTCCAGCTGCTGTCTGAACAGAAGGGCCTTTCACCGTGCTGCTTCATCAGTGCTGAGGTCGTACACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS GCA 72 bp TCCGCTCCTGCTGTGTACCAGGGGGCAGAGGGCTGCTaGATAGCCACTCTTTCCGGTTCTTTGTCCATTACT +
Preference number: 6 (lower is better)
Translates to: SAPAVYQGAEGC*IATLSGSLSIT
Trigger: AGTAATGGACAAAGAACCGGAAAGAGTGGCTATGCAGCAGCCCTCTGCCCCCTGGTACACAGCAGGAGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS GCA 72 bp CGGTTGTTCACATCAACATCCAGGGTCACAGTCCTCTaGTCTGGGACAGTAGCAGCTAACAGCGCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: RLFTSTSRVTVL*SGTVAANSAAA
Trigger: GGCAGCTGCGCTGTTAGCTGCTACTGTCCCAGAGCAGAGGACTGTGACCCTGGATGTTGATGTGAACAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS GCA 72 bp CTGCATAGCCACTGCATGATGTCTATGCCCATCGCCTaGGTCTGGACCCCCTCCACGTTGTTCATCAACCAG +
Preference number: 6 (lower is better)
Translates to: LHSHCMMSMPIA*VWTPSTLFINQ
Trigger: CTGGTTGATGAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGGCATAGACATCATGCAGTGGCTATGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS CCA 72 bp TCTGAGGCGTGTATCCTCCAGGTCGGACATGGAGCATaGACTCTGCACTACCCACATGGAACCTTCCTGGTG +
Preference number: 6 (lower is better)
Translates to: SEACILQVGHGA*TLHYPHGTFLV
Trigger: CACCAGGAAGGTTCCATGTGGGTAGTGCAGAGTCCATGCTCCATGTCCGACCTGGAGGATACACGCCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
CDS CCA 72 bp AGGGCGATTTCGGGACACAAGGCCTCTGCTATAGAGTaGGCTACTGCTCAATGGGGGTGGGACTGTGGTGTT +
Preference number: 6 (lower is better)
Translates to: RAISGHKASAIE*ATAQWGWDCGV
Trigger: AACACCACAGTCCCACCCCCATTGAGCAGTAGCCCACTCTATAGCAGAGGCCTTGTGTCCCGAAATCGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CCA 72 bp TCACATGCTGCACCTTGCGTGGGCTGTCCACATAGGTaGGAGTCATGGCAACACTGCTGTTCTCAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: SHAAPCVGCPHR*ESWQHCCSQLA
Trigger: AGCCAGCTGAGAACAGCAGTGTTGCCATGACTCCCACCTATGTGGACAGCCCACGCAAGGTGCAGCATGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049780.13
CDS CCA 72 bp AGCCACTGCATGATGTCTATGCCCATCGCCTGCGTCTaGACCCCCTCCACGTTGTTCATCAACCAGTGTACG +
Preference number: 6 (lower is better)
Translates to: SHCMMSMPIACV*TPSTLFINQCT
Trigger: CGTACACTGGTTGATGAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGGCATAGACATCATGCAGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS CAA 72 bp TCTATGCCCATCGCCTGCGTCTGGACCCCCTCCACGTaGTTCATCAACCAGTGTACGACCTCAGCACTGATG +
Preference number: 6 (lower is better)
Translates to: SMPIACVWTPST*FINQCTTSALM
Trigger: CATCAGTGCTGAGGTCGTACACTGGTTGATGAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGGCATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CAA 90 bp TGCATGATGTCTATGCCCATCGCCTGCGTCTGGACCCCCTCCACGTaGTTCATCAACCAGTGTACGACCTCAGCACTGATGAAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: CMMSMPIACVWTPST*FINQCTTSALMKQH
Trigger: GTGCTGCTTCATCAGTGCTGAGGTCGTACACTGGTTGATGAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGGCATAGACATCATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS TCA 72 bp GTGGGAGTCATGGCAACACTGCTGTTCTCAGCTGGCTaGGTGGAGCTTTTTCCGTGCACAGTCGTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: VGVMATLLFSAG*VELFPCTVVCC
Trigger: ACAGCAGACGACTGTGCACGGAAAAAGCTCCACTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000130461.2
ENSMUST00000137169.8
CDS TCA 72 bp TCTGGTTGTTGCCTCTATCCATGGGCTGGCCTGTGCTaGCCCCTAAACTGGTGCTGTCTAACACCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: SGCCLYPWAGLC*PLNWCCLTPEE
Trigger: CTCCTCTGGTGTTAGACAGCACCAGTTTAGGGGTCAGCACAGGCCAGCCCATGGATAGAGGCAACAACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000130461.2
ENSMUST00000137169.8
CDS GCA 72 bp TTCGGGACACAAGGCCTCTGCTATAGAGTGGGCTACTaGTCAATGGGGGTGGGACTGTGGTGTTGGGTTTCT +
Preference number: 6 (lower is better)
Translates to: FGTQGLCYRVGY*SMGVGLWCWVS
Trigger: AGAAACCCAACACCACAGTCCCACCCCCATTGAGCAGTAGCCCACTCTATAGCAGAGGCCTTGTGTCCCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS GCA 72 bp GTGGGCTGTCCACATAGGTGGGAGTCATGGCAACACTaGTGTTCTCAGCTGGCTGAGTGGAGCTTTTTCCGT +
Preference number: 6 (lower is better)
Translates to: VGCPHRWESWQH*CSQLAEWSFFR
Trigger: ACGGAAAAAGCTCCACTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTCCCACCTATGTGGACAGCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000130461.2
ENSMUST00000137169.8
CDS GCA 72 bp CAAGCTCTTCTGCCACAAAGGCCACCTCAAACCACTTaGGTTGGAAGCTGGCAAAGTCATCCGCTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: QALLPQRPPQTT*VGSWQSHPLLL
Trigger: CAGCAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGCCTTTGTGGCAGAAGAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS GCA 72 bp CTAACACCAGAGGAGCTGTTTGGTCCACAGATGCCTTaGGTGGGCTGTCCACATAGGTGGGAGTCATGGCAA +
Preference number: 6 (lower is better)
Translates to: LTPEELFGPQMP*VGCPHRWESWQ
Trigger: TTGCCATGACTCCCACCTATGTGGACAGCCCACGCAAGGCATCTGTGGACCAAACAGCTCCTCTGGTGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CCA 72 bp CACAAGGCCTCTGCTATAGAGTGGGCTACTGCTCAATaGGGGTGGGACTGTGGTGTTGGGTTTCTGGGTCTT +
Preference number: 6 (lower is better)
Translates to: HKASAIEWATAQ*GWDCGVGFLGL
Trigger: AAGACCCAGAAACCCAACACCACAGTCCCACCCCCATTGAGCAGTAGCCCACTCTATAGCAGAGGCCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CAA 90 bp TCAGAGTGCACAAGCTCTTCTGCCACAAAGGCCACCTCAAACCACTaGCGTTGGAAGCTGGCAAAGTCATCCGCTCCTGCTGTGTACCAG +
Preference number: 6 (lower is better)
Translates to: SECTSSSATKATSNH*RWKLAKSSAPAVYQ
Trigger: CTGGTACACAGCAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGCCTTTGTGGCAGAAGAGCTTGTGCACTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS GCA 72 bp TCCAGCATTTTCTGCATGATGTCTATGCCCATCGCCTaGGTCTGGACCCCCTCCACGTTGTTCATCAACCAG +
Preference number: 6 (lower is better)
Translates to: SSIFCMMSMPIA*VWTPSTLFINQ
Trigger: CTGGTTGATGAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGGCATAGACATCATGCAGAAAATGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CCA 72 bp ATAGGTGGGAGTCATGGCAACACTGCTGTTCTCAGCTaGCTGAGTGGAGCTTTTTCCGTGCACAGTCGTCTG +
Preference number: 6 (lower is better)
Translates to: IGGSHGNTAVLS*LSGAFSVHSRL
Trigger: CAGACGACTGTGCACGGAAAAAGCTCCACTCAGCCAGCTGAGAACAGCAGTGTTGCCATGACTCCCACCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000130461.2
ENSMUST00000137169.8
CDS CCA 72 bp TCTTCTGCCACAAAGGCCACCTCAAACCACTTGCGTTaGAAGCTGGCAAAGTCATCCGCTCCTGCTGTGTAC +
Preference number: 6 (lower is better)
Translates to: SSATKATSNHLR*KLAKSSAPAVY
Trigger: GTACACAGCAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGCCTTTGTGGCAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CAA 72 bp CTCTTCTGCCACAAAGGCCACCTCAAACCACTTGCGTaGGAAGCTGGCAAAGTCATCCGCTCCTGCTGTGTA +
Preference number: 6 (lower is better)
Translates to: LFCHKGHLKPLA*EAGKVIRSCCV
Trigger: TACACAGCAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGCCTTTGTGGCAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CAA 72 bp ACAAGCTCTTCTGCCACAAAGGCCACCTCAAACCACTaGCGTTGGAAGCTGGCAAAGTCATCCGCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: TSSSATKATSNH*RWKLAKSSAPA
Trigger: AGCAGGAGCGGATGACTTTGCCAGCTTCCAACGCAAGTGGTTTGAGGTGGCCTTTGTGGCAGAAGAGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CAA 90 bp GAGACGCTGGCAGATGAACTCTTCAAACACTTGCTGGGCTGTCATTaGAACACCCTCCTCATCCCTCCTGTCCATGTCTGCTTCTGGGAG +
Preference number: 6 (lower is better)
Translates to: ETLADELFKHLLGCH*NTLLIPPVHVCFWE
Trigger: CTCCCAGAAGCAGACATGGACAGGAGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCAAGTGTTTGAAGAGTTCATCTGCCAGCGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS GCA 72 bp GAGGAAGGCAGGAATCTCAGAGTGCACAAGCTCTTCTaGCACAAAGGCCACCTCAAACCACTTGCGTTGGAA +
Preference number: 6 (lower is better)
Translates to: EEGRNLRVHKLF*HKGHLKPLALE
Trigger: TTCCAACGCAAGTGGTTTGAGGTGGCCTTTGTGGCAGAAGAGCTTGTGCACTCTGAGATTCCTGCCTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CCA 72 bp ATTTTCTGCATGATGTCTATGCCCATCGCCTGCGTCTaGACCCCCTCCACGTTGTTCATCAACCAGTGTACG +
Preference number: 6 (lower is better)
Translates to: IFCMMSMPIACV*TPSTLFINQCT
Trigger: CGTACACTGGTTGATGAACAACGTGGAGGGGGTCCAGACGCAGGCGATGGGCATAGACATCATGCAGAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CAA 90 bp GGCATTGGGTCTGGAGAGGTAGAAACACTGTCCTCTAGGGAGTCCTaGTTCTGGGTCCTAGGATTCACACCTGTACTGCTGTTGCTAAGC +
Preference number: 6 (lower is better)
Translates to: GIGSGEVETLSSRES*FWVLGFTPVLLLLS
Trigger: GCTTAGCAACAGCAGTACAGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGACAGTGTTTCTACCTCTCCAGACCCAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049780.13
ENSMUST00000119705.8
ENSMUST00000120902.8
CDS CAA 90 bp TTGGTAACCCTGCATGAGACGCTGGCAGATGAACTCTTCAAACACTaGCTGGGCTGTCATTTGAACACCCTCCTCATCCCTCCTGTCCAT +
Preference number: 6 (lower is better)
Translates to: LVTLHETLADELFKH*LGCHLNTLLIPPVH
Trigger: ATGGACAGGAGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCAAGTGTTTGAAGAGTTCATCTGCCAGCGTCTCATGCAGGGTTACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS GCA 72 bp GTCCGCCATGCTTCACCAGATGCATGCGTTATGAGCTaGTCTTCCAGCATTTTCTGCATGATGTCTATGCCC +
Preference number: 6 (lower is better)
Translates to: VRHASPDACVMS*SSSIFCMMSMP
Trigger: GGGCATAGACATCATGCAGAAAATGCTGGAAGAGCAGCTCATAACGCATGCATCTGGTGAAGCATGGCGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CCA 72 bp CCAGAGTTTGCAGAGGGAAAGGCCTGTTCTATGTTCTaGGAGTTCCCAAAGGTCTGGTTGTTGCCTCTATCC +
Preference number: 6 (lower is better)
Translates to: PEFAEGKACSMF*EFPKVWLLPLS
Trigger: GGATAGAGGCAACAACCAGACCTTTGGGAACTCCCAGAACATAGAACAGGCCTTTCCCTCTGCAAACTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CAA 72 bp TCTGGAGAGGTAGAAACACTGTCCTCTAGGGAGTCCTaGTTCTGGGTCCTAGGATTCACACCTGTACTGCTG +
Preference number: 6 (lower is better)
Translates to: SGEVETLSSRES*FWVLGFTPVLL
Trigger: CAGCAGTACAGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGACAGTGTTTCTACCTCTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CAA 72 bp GCAGATGAACTCTTCAAACACTTGCTGGGCTGTCATTaGAACACCCTCCTCATCCCTCCTGTCCATGTCTGC +
Preference number: 6 (lower is better)
Translates to: ADELFKHLLGCH*NTLLIPPVHVC
Trigger: GCAGACATGGACAGGAGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCAAGTGTTTGAAGAGTTCATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CAA 72 bp CTGCATGAGACGCTGGCAGATGAACTCTTCAAACACTaGCTGGGCTGTCATTTGAACACCCTCCTCATCCCT +
Preference number: 6 (lower is better)
Translates to: LHETLADELFKH*LGCHLNTLLIP
Trigger: AGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCAAGTGTTTGAAGAGTTCATCTGCCAGCGTCTCATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CAA 90 bp AGAATTGGGTCTGGAGAGGTAGAAACACTGTCCTCTAGGGAGTCCTaGTTCTGGGTCCTAGGATTCACACCTGTACTGCTGTTGCTAAGC +
Preference number: 6 (lower is better)
Translates to: RIGSGEVETLSSRES*FWVLGFTPVLLLLS
Trigger: GCTTAGCAACAGCAGTACAGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGACAGTGTTTCTACCTCTCCAGACCCAATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087897.11
ENSMUST00000137169.8
CDS TCA 72 bp CAGATGAACTCTTCAAACACTTGCTGGGCTGTCATTTaGACACCCTCCTCATCCCTCCTGTCCATGTCTGCT +
Preference number: 6 (lower is better)
Translates to: QMNSSNTCWAVI*TPSSSLLSMSA
Trigger: AGCAGACATGGACAGGAGGGATGAGGAGGGTGTTCAAATGACAGCCCAGCAAGTGTTTGAAGAGTTCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS GCA 72 bp AAGCCCTCTACAAAGCGAATAAAGCCATCTAGAAGCTaGCACTCATCTTCATCTGCACGGGGTTTGTCCCCA +
Preference number: 6 (lower is better)
Translates to: KPSTKRIKPSRS*HSSSSARGLSP
Trigger: TGGGGACAAACCCCGTGCAGATGAAGATGAGTGGCAGCTTCTAGATGGCTTTATTCGCTTTGTAGAGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000130461.2
ENSMUST00000137169.8
CDS GCA 72 bp GAAGCCATAGATGAAGGTCCGCCATGCTTCACCAGATaGATGCGTTATGAGCTGCTCTTCCAGCATTTTCTG +
Preference number: 6 (lower is better)
Translates to: EAIDEGPPCFTR*MRYELLFQHFL
Trigger: CAGAAAATGCTGGAAGAGCAGCTCATAACGCATGCATCTGGTGAAGCATGGCGGACCTTCATCTATGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CCA 72 bp GAGGTAGAAACACTGTCCTCTAGGGAGTCCTTGTTCTaGGTCCTAGGATTCACACCTGTACTGCTGTTGCTA +
Preference number: 6 (lower is better)
Translates to: EVETLSSRESLF*VLGFTPVLLLL
Trigger: TAGCAACAGCAGTACAGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGACAGTGTTTCTACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS CCA 72 bp GAGGTAGAAACACTGTCCTCTAGGGAGTCCTTGTTCTaGGTCCTAGGATTCACACCTACAGGAAAAGTGTGC +
Preference number: 6 (lower is better)
Translates to: EVETLSSRESLF*VLGFTPTGKVC
Trigger: GCACACTTTTCCTGTAGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGACAGTGTTTCTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS CAA 72 bp GGTGTTGGGTTTCTGGGTCTTTGGCTGTACTATGATTaGGTAACCCTGCATGAGACGCTGGCAGATGAACTC +
Preference number: 6 (lower is better)
Translates to: GVGFLGLWLYYD*VTLHETLADEL
Trigger: GAGTTCATCTGCCAGCGTCTCATGCAGGGTTACCAAATCATAGTACAGCCAAAGACCCAGAAACCCAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CAA 72 bp TTGCTACATGCTGCTGAGAGCTGTAGTCACCAGAGTTaGCAGAGGGAAAGGCCTGTTCTATGTTCTGGGAGT +
Preference number: 6 (lower is better)
Translates to: LLHAAESCSHQS*QRERPVLCSGS
Trigger: ACTCCCAGAACATAGAACAGGCCTTTCCCTCTGCAAACTCTGGTGACTACAGCTCTCAGCAGCATGTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CAA 90 bp TGGGACTGTGGTGTTGGGTTTCTGGGTCTTTGGCTGTACTATGATTaGGTAACCCTGCATGAGACGCTGGCAGATGAACTCTTCAAACAC +
Preference number: 6 (lower is better)
Translates to: WDCGVGFLGLWLYYD*VTLHETLADELFKH
Trigger: GTGTTTGAAGAGTTCATCTGCCAGCGTCTCATGCAGGGTTACCAAATCATAGTACAGCCAAAGACCCAGAAACCCAACACCACAGTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8
CDS CAA 90 bp AGAATTGGGTCTGGAGAGGTAGAAACACTGTCCTCTAGGGAGTCCTaGTTCTGGGTCCTAGGATTCACACCTACAGGAAAAGTGTGCATC +
Preference number: 6 (lower is better)
Translates to: RIGSGEVETLSSRES*FWVLGFTPTGKVCI
Trigger: GATGCACACTTTTCCTGTAGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGACAGTGTTTCTACCTCTCCAGACCCAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS CCA 72 bp CCTAAACTGGTGCTGTCTAACACCAGAGGAGCTGTTTaGTCCACAGATGCACATAGGGTTTTTCCATTCCTC +
Preference number: 6 (lower is better)
Translates to: PKLVLSNTRGAV*STDAHRVFPFL
Trigger: GAGGAATGGAAAAACCCTATGTGCATCTGTGGACCAAACAGCTCCTCTGGTGTTAGACAGCACCAGTTTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130461.2
CDS CAA 72 bp TCTGGAGAGGTAGAAACACTGTCCTCTAGGGAGTCCTaGTTCTGGGTCCTAGGATTCACACCTACAGGAAAA +
Preference number: 6 (lower is better)
Translates to: SGEVETLSSRES*FWVLGFTPTGK
Trigger: TTTTCCTGTAGGTGTGAATCCTAGGACCCAGAACAAGGACTCCCTAGAGGACAGTGTTTCTACCTCTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124780.8
CDS GCA 72 bp CTTGTAGAAATAGAAGCCATAGATGAAGGTCCGCCATaGTTCACCAGATGCATGCGTTATGAGCTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: LVEIEAIDEGPP*FTRCMRYELLF
Trigger: GAAGAGCAGCTCATAACGCATGCATCTGGTGAAGCATGGCGGACCTTCATCTATGGCTTCTATTTCTACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000137169.8
CDS TCA 72 bp TTCTTTAGTCGCCACATATCCCCACGGCCAATATACTaGTCCTTAAAAGTCAATTCCACCAGGTCAAGAGTC +
Preference number: 6 (lower is better)
Translates to: FFSRHISPRPIY*SLKVNSTRSRV
Trigger: GACTCTTGACCTGGTGGAATTGACTTTTAAGGATCAGTATATTGGCCGTGGGGATATGTGGCGACTAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000118698.8
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000125574.8
ENSMUST00000149350.8
ENSMUST00000195980.5
CDS GCA 72 bp GCAGGGAAGTTAAAAGCGGAGACAGAATATTTATCTTaGACAAATCCAAACTATCGAACAGGTGCTCGCTGC +
Preference number: 6 (lower is better)
Translates to: AGKLKAETEYLS*TNPNYRTGARC
Trigger: GCAGCGAGCACCTGTTCGATAGTTTGGATTTGTGCAAGATAAATATTCTGTCTCCGCTTTTAACTTCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087897.11
CDS CCA 72 bp GTTACTGTGATCATCTTGTCCTTGAGTGTCACCTTATaGAAAGTTCTGCCCATACTTAACCAATACTGGCCT +
Preference number: 6 (lower is better)
Translates to: VTVIILSLSVTL*KVLPILNQYWP
Trigger: AGGCCAGTATTGGTTAAGTATGGGCAGAACTTTCCATAAGGTGACACTCAAGGACAAGATGATCACAGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049780.13
ENSMUST00000087897.11
ENSMUST00000119705.8
ENSMUST00000120902.8
ENSMUST00000124780.8
ENSMUST00000137169.8