Pregenerated sensors for DEPDC1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021697Ensembl transcript IDs: ENSMUST00000051594.12, ENSMUST00000163307.8, ENSMUST00000171178.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACGAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCATATTaGAGTAGTTTACACCAGCCTTCCAGAACCTCTGCTGACTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: ARGVGRSAGCSETPY*SSLHQPSRTSADSN Trigger: GTTTGAGTCAGCAGAGGTTCTGGAAGGCTGGTGTAAACTACTGCAATATGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTCGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| 3UTR TCA 90 bp | GATCCAGGCTTCCTCTCCCCTTCAGCACTGTACTGCATACAACACTaGGTCCCTTGTCTACAGTTACGTGTAGACATGCCTGCTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: DPGFLSPSALYCIQH*VPCLQLRVDMPAFL Trigger: AAGGAAAGCAGGCATGTCTACACGTAACTGTAGACAAGGGACTCAGTGTTGTATGCAGTACAGTGCTGAAGGGGAGAGGAAGCCTGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| 3UTR TCA 90 bp | ACTCATTTACATCTCTACAAACAGCATCGAGATTTATCAGAATACTaGCAAGGGCTCAGCACGAGGAGTCGGGCGATCGGCTGGATGCTC | + |
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Preference number: 1 (lower is better) Translates to: THLHLYKQHRDLSEY*QGLSTRSRAIGWML Trigger: GAGCATCCAGCCGATCGCCCGACTCCTCGTGCTGAGCCCTTGTCAGTATTCTGATAAATCTCGATGCTGTTTGTAGAGATGTAAATGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| 3UTR-3UTR TCA 90 bp | CACCACCCCTACCCACGAGACTCACAGTCACCCACTCATTTACATCTCTACAAAGATTTATCAGAATACTaGCAAGGGCTCAGCACGAGG | + |
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Preference number: 2 (lower is better) Translates to: HHPYPRDSQSPTHLHLYKDLSEY*QGLSTR Trigger: CCTCGTGCTGAGCCCTTGTCAGTATTCTGATAAATC...TTTGTAGAGATGTAAATGAGTGGGTGACTGTGAGTCTCGTGGGTAGGGGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| 3UTR GCA 72 bp | CCAGCTCAACCTGCCGCCTTTAGCGGAGACCCGGATTaGGGGCCCGGGGGCAGATGCACACCATTCCACATC | + |
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Preference number: 3 (lower is better) Translates to: PAQPAAFSGDPD*GPGGRCTPFHI Trigger: GATGTGGAATGGTGTGCATCTGCCCCCGGGCCCGCAATCCGGGTCTCCGCTAAAGGCGGCAGGTTGAGCTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| 3UTR GCA 72 bp | GTCGGGCGATCGGCTGGATGCTCCGAGACTCCATATTaGAGTAGTTTACACCAGCCTTCCAGAACCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: VGRSAGCSETPY*SSLHQPSRTSA Trigger: AGCAGAGGTTCTGGAAGGCTGGTGTAAACTACTGCAATATGGAGTCTCGGAGCATCCAGCCGATCGCCCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| 3UTR TCA 72 bp | CATCTCTACAAACAGCATCGAGATTTATCAGAATACTaGCAAGGGCTCAGCACGAGGAGTCGGGCGATCGGC | + |
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Preference number: 3 (lower is better) Translates to: HLYKQHRDLSEY*QGLSTRSRAIG Trigger: GCCGATCGCCCGACTCCTCGTGCTGAGCCCTTGTCAGTATTCTGATAAATCTCGATGCTGTTTGTAGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| 3UTR CCA 72 bp | GAGAGCAGGGGGCACACACAAGGACTTTACACACCGTaGAAAACAACAAACAGAAGGAAGGGAACGAATGTT | + |
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Preference number: 3 (lower is better) Translates to: ESRGHTQGLYTP*KTTNRRKGTNV Trigger: AACATTCGTTCCCTTCCTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGTCCTTGTGTGTGCCCCCTGCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| 3UTR-3UTR CAA 90 bp | TCTCCCCTTCAGCACTGTACTGCATACAACACTGAGTCCCTTGTCTACAGTTACCTTTCCTTTGTAGAGTaGCAGACATCTCTTTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SPLQHCTAYNTESLVYSYLSFVE*QTSLFL Trigger: GAGAAAAAGAGATGTCTGCAACTCTACAAAGGAAAG...GTAACTGTAGACAAGGGACTCAGTGTTGTATGCAGTACAGTGCTGAAGGGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| 3UTR GCA 72 bp | CAGGCAAATCTGCAATACAAGACACGGCAATCACAGTaGAAAACAGTTGGACTTTTCACACTAACCAAACAA | + |
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Preference number: 3 (lower is better) Translates to: QANLQYKTRQSQ*KTVGLFTLTKQ Trigger: TTGTTTGGTTAGTGTGAAAAGTCCAACTGTTTTGCACTGTGATTGCCGTGTCTTGTATTGCAGATTTGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR TCA 90 bp | ATTGCGGGCCCGGGGGCAGATGCACACCATTCCACATCCAGCCACGCGCAGACCCCACTCCCTGCTTGCTaGCACTGTACACGTTATGGA | + |
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Preference number: 4 (lower is better) Translates to: IAGPGADAHHSTSSHAQTPLPAC*HCTRYG Trigger: TCCATAACGTGTACAGTGTCAGCAAGCAGGGAGTGG...GGTCTGCGCGTGGCTGGATGTGGAATGGTGTGCATCTGCCCCCGGGCCCGCAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR GCA 90 bp | ATTGCGGGCCCGGGGGCAGATGCACACCATTCCACATCCAGCCACGCGCAGACCCCCAAGTACATAGGCTaGTTCCAGTCTGTACAGTTG | + |
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Preference number: 4 (lower is better) Translates to: IAGPGADAHHSTSSHAQTPKYIG*FQSVQL Trigger: CAACTGTACAGACTGGAAGCAGCCTATGTACTTGGG...GGTCTGCGCGTGGCTGGATGTGGAATGGTGTGCATCTGCCCCCGGGCCCGCAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR TCA 90 bp | GAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCATATTGCAGTAGTTTACTCCTCAGTGCCCACATaGACAGCTGCGGCTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: EESGDRLDAPRLHIAVVYSSVPT*TAAAWP Trigger: AGGCCAAGCCGCAGCTGTTCATGTGGGCACTGAGGA...GTAAACTACTGCAATATGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| CDS-3UTR CCA 90 bp | TTCCAAAGGCAAATCACTGAAGATCCAGGCTTCCTCTCCCCTTCAGCACTGTACGTCAGCTGTCTGCGGTaGACGAGGCGGCATGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: FQRQITEDPGFLSPSALYVSCLR*TRRHAG Trigger: GCCGGCATGCCGCCTCGTCCACCGCAGACAGCTGAC...GTACAGTGCTGAAGGGGAGAGGAAGCCTGGATCTTCAGTGATTTGCCTTTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR TCA 90 bp | AAGAAGGGCTCAGCACGAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCAAAGGTGCAGACAGAGTaGTATCCATATCAGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KKGSARGVGRSAGCSETPKVQTE*YPYQLL Trigger: CAGGAGCTGATATGGATATCACTCTGTCTGCACCTT...TGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTCGTGCTGAGCCCTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR GCA 90 bp | GTATTCCTAGGCTTGGTTTTCACAGACGCACACGAGAGCAGGGGGCACACACAATTCTTCCAACAAGGCTaGCAGGGGCTCCTGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: VFLGLVFTDAHESRGHTQFFQQG*QGLLGA Trigger: GGCTCCCAGGAGCCCCTGGCAGCCTTGTTGGAAGAA...TTGTGTGTGCCCCCTGCTCTCGTGTGCGTCTGTGAAAACCAAGCCTAGGAATAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR CCA 90 bp | GAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCATATTGCAGTAGTTTACCCACACGCTCTTCTATaGAGGTCTGCAGGGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: EESGDRLDAPRLHIAVVYPHALL*RSAGPE Trigger: CTCTGGCCCTGCAGACCTCCATAGAAGAGCGTGTGG...GTAAACTACTGCAATATGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| CDS-3UTR TCA 90 bp | CAAAGACTTCATCCAGCTCAACCTGCCGCCTTTAGCGGAGACCCGGATTGCGGGGTTTGTCGTCGGCTATaGCTTCTTCCAACAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QRLHPAQPAAFSGDPDCGVCRRL*LLPTRL Trigger: CAGCCTTGTTGGAAGAAGTCATAGCCGACGACAAAC...CCCGCAATCCGGGTCTCCGCTAAAGGCGGCAGGTTGAGCTGGATGAAGTCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR GCA 90 bp | GAGCAGGGGGCACACACAAGGACTTTACACACCGTGGAAAACAACAAACAGAAGGTGGACGAGGCGGCATaGCGGCACCTCTCCAATAGC | + |
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Preference number: 4 (lower is better) Translates to: EQGAHTRTLHTVENNKQKVDEAA*RHLSNS Trigger: GCTATTGGAGAGGTGCCGGCATGCCGCCTCGTCCAC...CTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGTCCTTGTGTGTGCCCCCTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR CCA 90 bp | GACAAGGGCTCAGCACGAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCAACACTGTACACGTTATaGATGATGAACTTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: DKGSARGVGRSAGCSETPTLYTL*MMNLEL Trigger: CAGCTCCAAGTTCATCATCCATAACGTGTACAGTGT...TGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTCGTGCTGAGCCCTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR CCA 90 bp | AAGAAGGGCTCAGCACGAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCAATGAAATGTGAGCAGTaGCTCCTTCAGGTGACCATA | + |
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Preference number: 4 (lower is better) Translates to: KKGSARGVGRSAGCSETPMKCEQ*LLQVTI Trigger: TATGGTCACCTGAAGGAGCCACTGCTCACATTTCAT...TGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTCGTGCTGAGCCCTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR CCA 90 bp | GCTCAGCACGAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCATATTGCAGCTGAAATGCTTCAATaGCCGTTTTCTCCTTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: AQHEESGDRLDAPRLHIAAEMLQ*PFSPSA Trigger: TGCCGAAGGAGAAAACGGCCATTGAAGCATTTCAGC...TGCAATATGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTCGTGCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| CDS-3UTR CCA 90 bp | GCTCAGCACGAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCATATTGCATCCAGTCTGTACAGTTaGGCCAATTTGCCAAACACT | + |
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Preference number: 4 (lower is better) Translates to: AQHEESGDRLDAPRLHIASSLYS*ANLPNT Trigger: AGTGTTTGGCAAATTGGCCCAACTGTACAGACTGGA...TGCAATATGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTCGTGCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| CDS-3UTR GCA 90 bp | ATTGCGGGCCCGGGGGCAGATGCACACCATTCCACATCCAGCCACGCGCAGACCGTGACCATAGTAATCTaGTATAGTCTTAAAGACATC | + |
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Preference number: 4 (lower is better) Translates to: IAGPGADAHHSTSSHAQTVTIVI*YSLKDI Trigger: GATGTCTTTAAGACTATAGCAGATTACTATGGTCAC...GGTCTGCGCGTGGCTGGATGTGGAATGGTGTGCATCTGCCCCCGGGCCCGCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR GCA 90 bp | TTCCAAAGGCAAATCACTGAAGATCCAGGCTTCCTCTCCCCTTCAGCACTGTACCCATCAGTGTGCGGGTaGCGAAGCCATCACTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: FQRQITEDPGFLSPSALYPSVCG*RSHHSV Trigger: CACTGAGTGATGGCTTCGGCACCCGCACACTGATGG...GTACAGTGCTGAAGGGGAGAGGAAGCCTGGATCTTCAGTGATTTGCCTTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR GCA 90 bp | TCTCCCCTTCAGCACTGTACTGCATACAACACTGAGTCCCTTGTCTACAGTTACTTCTTCCAACAAGGCTaGCAGGGGCTCCTGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SPLQHCTAYNTESLVYSYFFQQG*QGLLGA Trigger: GGCTCCCAGGAGCCCCTGGCAGCCTTGTTGGAAGAA...GTAACTGTAGACAAGGGACTCAGTGTTGTATGCAGTACAGTGCTGAAGGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR CCA 90 bp | GACAAGGGCTCAGCACGAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCAGGGATCGTTCCATTCTaGAAACTTAATAACATCTCT | + |
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Preference number: 4 (lower is better) Translates to: DKGSARGVGRSAGCSETPGIVPF*KLNNIS Trigger: AGAGATGTTATTAAGTTTCCAGAATGGAACGATCCC...TGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTCGTGCTGAGCCCTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR CCA 90 bp | CCCCTACCCACGAGACTCACAGTCACCCACTCATTTACATCTCTACAAACAGCACCACACGCTCTTCTATaGAGGTCTGCAGGGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PLPTRLTVTHSFTSLQTAPHALL*RSAGPE Trigger: CTCTGGCCCTGCAGACCTCCATAGAAGAGCGTGTGG...TGCTGTTTGTAGAGATGTAAATGAGTGGGTGACTGTGAGTCTCGTGGGTAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR CCA 90 bp | CTGCTTTCCTTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCGCTGCCAGGGGCTCCTaGGAGCCATACGCCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LLSFVELQTSLFLSHRQAAARGS*EPYALW Trigger: CCAAAGGGCGTATGGCTCCCAGGAGCCCCTGGCAGC...GGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAAGGAAAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR GCA 90 bp | CTGCATACAACACTGAGTCCCTTGTCTACAGTTACGTGTAGACATGCCTGCTTTTTCCGCAGAAGCTCGTaGAGCCAGTCCACAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LHTTLSPLSTVTCRHACFFRRSS*SQSTAS Trigger: GGAGGCTGTGGACTGGCTGCACGAGCTTCTGCGGAA...AAAGCAGGCATGTCTACACGTAACTGTAGACAAGGGACTCAGTGTTGTATGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR GCA 90 bp | AGAAATCAGAATATGCACTGGGTCAGGGCTACCACAGTAACAGCACACACAGGACCATCAGTGTGCGGGTaGCGAAGCCATCACTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RNQNMHWVRATTVTAHTGPSVCG*RSHHSV Trigger: CACTGAGTGATGGCTTCGGCACCCGCACACTGATGG...TCCTGTGTGTGCTGTTACTGTGGTAGCCCTGACCCAGTGCATATTCTGATTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR GCA 90 bp | TTCCAAAGGCAAATCACTGAAGATCCAGGCTTCCTCTCCCCTTCAGCACTGTACGCCCACATGAACAGCTaGGGCTTGGCCTTGGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: FQRQITEDPGFLSPSALYAHMNS*GLALGF Trigger: AAAACCCAAGGCCAAGCCGCAGCTGTTCATGTGGGC...GTACAGTGCTGAAGGGGAGAGGAAGCCTGGATCTTCAGTGATTTGCCTTTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR CCA 90 bp | CGAGAGCAGGGGGCACACACAAGGACTTTACACACCGTGGAAAACAACAAACAGAGATCTCTTCCACATTaGCCTCGGTCAGCTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: REQGAHTRTLHTVENNKQRSLPH*PRSAVC Trigger: GCAGACAGCTGACCGAGGCCAATGTGGAAGAGATCT...CTGTTTGTTGTTTTCCACGGTGTGTAAAGTCCTTGTGTGTGCCCCCTGCTCTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR CCA 90 bp | TCTGCAATACAAGACACGGCAATCACAGTGCAAAACAGTTGGACTTTTCACACTGCTGCCAGGGGCTCCTaGGAGCCATACGCCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SAIQDTAITVQNSWTFHTAARGS*EPYALW Trigger: CCAAAGGGCGTATGGCTCCCAGGAGCCCCTGGCAGC...AGTGTGAAAAGTCCAACTGTTTTGCACTGTGATTGCCGTGTCTTGTATTGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR GCA 90 bp | TTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTTGGTCTCGTGGACGAGGCGGCATaGCGGCACCTCTCCAATAGC | + |
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Preference number: 4 (lower is better) Translates to: FVELQTSLFLSHRQAFGLVDEAA*RHLSNS Trigger: GCTATTGGAGAGGTGCCGGCATGCCGCCTCGTCCAC...GAGACCAAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR GCA 90 bp | AATCTGCAATACAAGACACGGCAATCACAGTGCAAAACAGTTGGACTTTTCACACCTCGGTCAGCTGTCTaGGGTGGACGAGGCGGCATG | + |
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Preference number: 4 (lower is better) Translates to: NLQYKTRQSQCKTVGLFTPRSAV*GGRGGM Trigger: CATGCCGCCTCGTCCACCGCAGACAGCTGACCGAGG...TGTGAAAAGTCCAACTGTTTTGCACTGTGATTGCCGTGTCTTGTATTGCAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR CCA 90 bp | CCCTACCCACGAGACTCACAGTCACCCACTCATTTACATCTCTACAAACAGCATTCCGTAAAGGCATCCTaGCCCGGAAAAGCTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: PYPRDSQSPTHLHLYKQHSVKAS*PGKAPL Trigger: CAGTGGAGCTTTTCCGGGCCAGGATGCCTTTACGGA...ATGCTGTTTGTAGAGATGTAAATGAGTGGGTGACTGTGAGTCTCGTGGGTAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR CCA 90 bp | ACACAGGATTGTTCTCATTCAAGTATGTACAGTATTCCTAGGCTTGGTTTTCACGTCAGCTGTCTGCGGTaGACGAGGCGGCATGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: TQDCSHSSMYSIPRLGFHVSCLR*TRRHAG Trigger: GCCGGCATGCCGCCTCGTCCACCGCAGACAGCTGAC...GTGAAAACCAAGCCTAGGAATACTGTACATACTTGAATGAGAACAATCCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR GCA 90 bp | CAATACAAGACACGGCAATCACAGTGCAAAACAGTTGGACTTTTCACACTAACCTTCCGCAGAAGCTCGTaGAGCCAGTCCACAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QYKTRQSQCKTVGLFTLTFRRSS*SQSTAS Trigger: GGAGGCTGTGGACTGGCTGCACGAGCTTCTGCGGAA...GGTTAGTGTGAAAAGTCCAACTGTTTTGCACTGTGATTGCCGTGTCTTGTATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR GCA 90 bp | GCTCAGCACGAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCATATTGCAGTGACCATAGTAATCTaGTATAGTCTTAAAGACATC | + |
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Preference number: 4 (lower is better) Translates to: AQHEESGDRLDAPRLHIAVTIVI*YSLKDI Trigger: GATGTCTTTAAGACTATAGCAGATTACTATGGTCAC...TGCAATATGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTCGTGCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| CDS-3UTR GCA 90 bp | CTGCATACAACACTGAGTCCCTTGTCTACAGTTACGTGTAGACATGCCTGCTTTTCTGAACCATCAGTGTaGGGGTGCCGAAGCCATCAC | + |
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Preference number: 4 (lower is better) Translates to: LHTTLSPLSTVTCRHACFSEPSV*GCRSHH Trigger: GTGATGGCTTCGGCACCCGCACACTGATGGTTCAGA...AAAGCAGGCATGTCTACACGTAACTGTAGACAAGGGACTCAGTGTTGTATGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR GCA 90 bp | ATGTACAGTATTCCTAGGCTTGGTTTTCACAGACGCACACGAGAGCAGGGGGCATCTTCTTCTTCTCCTTaGTGGAGAGTTTGTCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: MYSIPRLGFHRRTREQGASSSSP*WRVCRR Trigger: CCGACGACAAACTCTCCAGCAAGGAGAAGAAGAAGA...TGCCCCCTGCTCTCGTGTGCGTCTGTGAAAACCAAGCCTAGGAATACTGTACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR GCA 90 bp | GAGCAGGGGGCACACACAAGGACTTTACACACCGTGGAAAACAACAAACAGAAGTTCAGGAAAGAGAAGTaGTTCGCTCTCTGGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: EQGAHTRTLHTVENNKQKFRKEK*FALWGR Trigger: CCTACCCCAGAGAGCGAAGCACTTCTCTTTCCTGAA...CTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGTCCTTGTGTGTGCCCCCTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR TCA 90 bp | CTGCATACAACACTGAGTCCCTTGTCTACAGTTACGTGTAGACATGCCTGCTTTCCACTCCCTGCTTGCTaGCACTGTACACGTTATGGA | + |
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Preference number: 4 (lower is better) Translates to: LHTTLSPLSTVTCRHACFPLPAC*HCTRYG Trigger: TCCATAACGTGTACAGTGTCAGCAAGCAGGGAGTGG...AAAGCAGGCATGTCTACACGTAACTGTAGACAAGGGACTCAGTGTTGTATGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR TCA 90 bp | CAGGGGGCACACACAAGGACTTTACACACCGTGGAAAACAACAAACAGAAGGAACAAACACTTCATAGCTaGCAGGACCCAGTGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QGAHTRTLHTVENNKQKEQTLHS*QDPVRK Trigger: CTTCCTCACTGGGTCCTGTCAGCTATGAAGTGTTTG...TTCCTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGTCCTTGTGTGTGCCCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR TCA 90 bp | TCTCCCCTTCAGCACTGTACTGCATACAACACTGAGTCCCTTGTCTACAGTTACGTTTGTCGTCGGCTATaGCTTCTTCCAACAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLQHCTAYNTESLVYSYVCRRL*LLPTRL Trigger: CAGCCTTGTTGGAAGAAGTCATAGCCGACGACAAAC...GTAACTGTAGACAAGGGACTCAGTGTTGTATGCAGTACAGTGCTGAAGGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTTTCCTCAGTGCCCACATaGACAGCTGCGGCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSFVELQTSLFLSHRQAFSSVPT*TAAAWP Trigger: AGGCCAAGCCGCAGCTGTTCATGTGGGCACTGAGGA...AAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAAGGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCATATTGCAGTAGTTTACATCCATATCAGCTCCTaGGTATTTTATCTGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: EESGDRLDAPRLHIAVVYIHISS*VFYLDS Trigger: AGAGTCCAGATAAAATACCCAGGAGCTGATATGGAT...GTAAACTACTGCAATATGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTACACACCGTGGAAAACAACAAACAGAAGGAAGGGAACGAATGTTTTACCTGGAATGTTCTCCTGTaGAGTGCCCGGTGGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TLHTVENNKQKEGNECFTWNVLL*SARWGI Trigger: GATCCCCCACCGGGCACTTCACAGGAGAACATTCCA...GGTAAAACATTCGTTCCCTTCCTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR GCA 90 bp | CTGCATACAACACTGAGTCCCTTGTCTACAGTTACGTGTAGACATGCCTGCTTTTTCAGGAAAGAGAAGTaGTTCGCTCTCTGGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHTTLSPLSTVTCRHACFFRKEK*FALWGR Trigger: CCTACCCCAGAGAGCGAAGCACTTCTCTTTCCTGAA...AAAGCAGGCATGTCTACACGTAACTGTAGACAAGGGACTCAGTGTTGTATGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR CCA 90 bp | CACCACCCCTACCCACGAGACTCACAGTCACCCACTCATTTACATCTCTACAAACCAATAGCAATACTGTaGCGCTTGAACCACATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HHPYPRDSQSPTHLHLYKPIAIL*RLNHIS Trigger: TGAGATGTGGTTCAAGCGCCACAGTATTGCTATTGG...TTTGTAGAGATGTAAATGAGTGGGTGACTGTGAGTCTCGTGGGTAGGGGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR CCA 90 bp | TTCCAAAGGCAAATCACTGAAGATCCAGGCTTCCTCTCCCCTTCAGCACTGTACCCAATAGCAATACTGTaGCGCTTGAACCACATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQRQITEDPGFLSPSALYPIAIL*RLNHIS Trigger: TGAGATGTGGTTCAAGCGCCACAGTATTGCTATTGG...GTACAGTGCTGAAGGGGAGAGGAAGCCTGGATCTTCAGTGATTTGCCTTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTCCTTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCAGATCTCTTCCACATTaGCCTCGGTCAGCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSFVELQTSLFLSHRQARSLPH*PRSAVC Trigger: GCAGACAGCTGACCGAGGCCAATGTGGAAGAGATCT...GGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAAGGAAAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTTTCCTTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCATATGGCTTCAGGGGTaGGGAGGGAGGAAATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLSFVELQTSLFLSHRQAIWLQG*GGRKSV Trigger: TACAGATTTCCTCCCTCCTCACCCCTGAAGCCATAT...GGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAAGGAAAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTACACACCGTGGAAAACAACAAACAGAAGGAAGGGAACGAATGTTTTACCTCTGAACCATCAGTGTaGGGGTGCCGAAGCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLHTVENNKQKEGNECFTSEPSV*GCRSHH Trigger: GTGATGGCTTCGGCACCCGCACACTGATGGTTCAGA...GGTAAAACATTCGTTCCCTTCCTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR GCA 90 bp | ACTTTACACACCGTGGAAAACAACAAACAGAAGGAAGGGAACGAATGTTTTACCGCCCACATGAACAGCTaGGGCTTGGCCTTGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLHTVENNKQKEGNECFTAHMNS*GLALGF Trigger: AAAACCCAAGGCCAAGCCGCAGCTGTTCATGTGGGC...GGTAAAACATTCGTTCCCTTCCTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTTTCCGTAAAGGCATCCTaGCCCGGAAAAGCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFVELQTSLFLSHRQAFSVKAS*PGKAPL Trigger: CAGTGGAGCTTTTCCGGGCCAGGATGCCTTTACGGA...AAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAAGGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGGGGCACACACAAGGACTTTACACACCGTGGAAAACAACAAACAGAAGAATTTTCCCAGCAGCTaGACTGTTTGTTTGCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EQGAHTRTLHTVENNKQKNFPSS*TVCLRV Trigger: AACTCGCAAACAAACAGTCCAGCTGCTGGGAAAATT...CTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGTCCTTGTGTGTGCCCCCTGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR CCA 90 bp | TTCCAAAGGCAAATCACTGAAGATCCAGGCTTCCTCTCCCCTTCAGCACTGTACAATTTTCCCAGCAGCTaGACTGTTTGTTTGCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FQRQITEDPGFLSPSALYNFPSS*TVCLRV Trigger: AACTCGCAAACAAACAGTCCAGCTGCTGGGAAAATT...GTACAGTGCTGAAGGGGAGAGGAAGCCTGGATCTTCAGTGATTTGCCTTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAAAGGCAAATCACTGAAGATCCAGGCTTCCTCTCCCCTTCAGCACTGTACACACTGTACACGTTATaGATGATGAACTTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQRQITEDPGFLSPSALYTLYTL*MMNLEL Trigger: CAGCTCCAAGTTCATCATCCATAACGTGTACAGTGT...GTACAGTGCTGAAGGGGAGAGGAAGCCTGGATCTTCAGTGATTTGCCTTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGGCACACACAAGGACTTTACACACCGTGGAAAACAACAAACAGAAGGAAGATGAAATGTGAGCAGTaGCTCCTTCAGGTGACCATA | + |
|
Preference number: 4 (lower is better) Translates to: RGHTQGLYTPWKTTNRRKMKCEQ*LLQVTI Trigger: TATGGTCACCTGAAGGAGCCACTGCTCACATTTCAT...CTTCCTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGTCCTTGTGTGTGCCCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTCCTTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCAAGTGCTTCGCTCTCTaGGGTAGGAAATCGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSFVELQTSLFLSHRQAKCFAL*GRKSFL Trigger: CAGGAACGATTTCCTACCCCAGAGAGCGAAGCACTT...GGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAAGGAAAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| 3UTR CAA 72 bp | ATTGTTCTCATTCAAGTATGTACAGTATTCCTAGGCTaGGTTTTCACAGACGCACACGAGAGCAGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IVLIQVCTVFLG*VFTDAHESRGH Trigger: GTGCCCCCTGCTCTCGTGTGCGTCTGTGAAAACCAAGCCTAGGAATACTGTACATACTTGAATGAGAACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR TCA 90 bp | CTGCATACAACACTGAGTCCCTTGTCTACAGTTACGTGTAGACATGCCTGCTTTAAAGCATCAAAGAGATaGAATGTGAGCAGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTTLSPLSTVTCRHACFKASKR*NVSSGS Trigger: GGAGCCACTGCTCACATTTCATCTCTTTGATGCTTT...AAAGCAGGCATGTCTACACGTAACTGTAGACAAGGGACTCAGTGTTGTATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTTTGGACTCTTCGCAGATaGGCCACACGCTCTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: LSFVELQTSLFLSHRQAFWTLRR*ATRSSM Trigger: CATAGAAGAGCGTGTGGCTCATCTGCGAAGAGTCCA...AAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAAGGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTTCCTTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTCTTCTTCTTCTCCTTaGTGGAGAGTTTGTCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSFVELQTSLFLSHRQASSSSP*WRVCRR Trigger: CCGACGACAAACTCTCCAGCAAGGAGAAGAAGAAGA...GGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAAGGAAAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTTGGTCTGCTGCGGCTTGGCCTTaGGTTTTTCAGGAAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCRVADISFSLSSSSLWSAAAWP*VFQERE Trigger: TTCTCTTTCCTGAAAAACCCAAGGCCAAGCCGCAGC...AGACCAAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR TCA 90 bp | GCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTTGGTCTCACACAATAGGTCAATACTGTGGCGCTTaGACCACATCTCAGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ADISFSLSSSSLWSHTIGQYCGA*TTSQNS Trigger: TGAATTCTGAGATGTGGTTCAAGCGCCACAGTATTG...ACCTATTGTGTGAGACCAAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTTCAAACACTTCATAGCTaGCAGGACCCAGTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSFVELQTSLFLSHRQAFQTLHS*QDPVRK Trigger: CTTCCTCACTGGGTCCTGTCAGCTATGAAGTGTTTG...AAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAAGGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR TCA 90 bp | ACACAGGATTGTTCTCATTCAAGTATGTACAGTATTCCTAGGCTTGGTTTTCACTGGACTCTTCGCAGATaGGCCACACGCTCTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: TQDCSHSSMYSIPRLGFHWTLRR*ATRSSM Trigger: CATAGAAGAGCGTGTGGCTCATCTGCGAAGAGTCCA...GTGAAAACCAAGCCTAGGAATACTGTACATACTTGAATGAGAACAATCCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTTGGTCTCAAACTTCTAGTTCTCTaGAACGGCTGGAAGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FVELQTSLFLSHRQAFGLKLLVL*NGWKGF Trigger: GAAGCCCTTCCAGCCGTTTCAGAGAACTAGAAGTTT...GAGACCAAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTTGGTCTCCCCAAGTACATAGGCTaGTTCCAGTCTGTACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FVELQTSLFLSHRQAFGLPKYIG*FQSVQL Trigger: CAACTGTACAGACTGGAAGCAGCCTATGTACTTGGG...GAGACCAAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCATTCAAGTATGTACAGTATTCCTAGGCTTGGTTTTCACAGACGCACAAAGTGCTTCGCTCTCTaGGGTAGGAAATCGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSHSSMYSIPRLGFHRRTKCFAL*GRKSFL Trigger: CAGGAACGATTTCCTACCCCAGAGAGCGAAGCACTT...TGTGCGTCTGTGAAAACCAAGCCTAGGAATACTGTACATACTTGAATGAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR CCA 90 bp | ACTTTACACACCGTGGAAAACAACAAACAGAAGGAAGGGAACGAATGTTTTACCGCTGCGGCTTGGCCTTaGGTTTTTCAGGAAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLHTVENNKQKEGNECFTAAAWP*VFQERE Trigger: TTCTCTTTCCTGAAAAACCCAAGGCCAAGCCGCAGC...GGTAAAACATTCGTTCCCTTCCTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| 3UTR CAA 72 bp | TGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTaGGTCTCACACAATAGGTTCCACAATAAGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRHLFFSLIVKP*VSHNRFHNKKG Trigger: GCCCTTCTTATTGTGGAACCTATTGTGTGAGACCAAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGGGCACACACAAGGACTTTACACACCGTGGAAAACAACAAACAGAAGGAATTAATAACATCTCTTTaGTACAGGGGCTTCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGAHTRTLHTVENNKQKELITSL*YRGFFG Trigger: TCCAAAGAAGCCCCTGTATCAAAGAGATGTTATTAA...TTCCTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGTCCTTGTGTGTGCCCCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCATTCAAGTATGTACAGTATTCCTAGGCTTGGTTTTCACAGACGCACAAAGGTGCAGACAGAGTaGTATCCATATCAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSHSSMYSIPRLGFHRRTKVQTE*YPYQLL Trigger: CAGGAGCTGATATGGATATCACTCTGTCTGCACCTT...TGTGCGTCTGTGAAAACCAAGCCTAGGAATACTGTACATACTTGAATGAGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR TCA 90 bp | ACTTTACACACCGTGGAAAACAACAAACAGAAGGAAGGGAACGAATGTTTTACCAAACTTCTAGTTCTCTaGAACGGCTGGAAGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLHTVENNKQKEGNECFTKLLVL*NGWKGF Trigger: GAAGCCCTTCCAGCCGTTTCAGAGAACTAGAAGTTT...GGTAAAACATTCGTTCCCTTCCTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR GCA 90 bp | GCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTTGGTCTCACACAATAGGTACAGCAAAGCTGAAATaGTTCAATGGCCGTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ADISFSLSSSSLWSHTIGTAKLK*FNGRFL Trigger: GAGAAAACGGCCATTGAAGCATTTCAGCTTTGCTGT...ACCTATTGTGTGAGACCAAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR TCA 90 bp | ACCGTGGAAAACAACAAACAGAAGGAAGGGAACGAATGTTTTACCTTTAGATTTATATGGCTTCAGGGGTaGGGAGGGAGGAAATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TVENNKQKEGNECFTFRFIWLQG*GGRKSV Trigger: TACAGATTTCCTCCCTCCTCACCCCTGAAGCCATAT...AAATCTAAAGGTAAAACATTCGTTCCCTTCCTTCTGTTTGTTGTTTTCCACGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR TCA 90 bp | ATAAAACAGACTGAATTCAGGTTTGCAGGTCTAAGGGAACCAAAGACTTCATCCCAATACTGTGGCGCTTaGACCACATCTCAGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: IKQTEFRFAGLREPKTSSQYCGA*TTSQNS Trigger: TGAATTCTGAGATGTGGTTCAAGCGCCACAGTATTG...GGATGAAGTCTTTGGTTCCCTTAGACCTGCAAACCTGAATTCAGTCTGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR TCA 90 bp | ACTTTACACACCGTGGAAAACAACAAACAGAAGGAAGGGAACGAATGTTTTACCAAAGCATCAAAGAGATaGAATGTGAGCAGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLHTVENNKQKEGNECFTKASKR*NVSSGS Trigger: GGAGCCACTGCTCACATTTCATCTCTTTGATGCTTT...GGTAAAACATTCGTTCCCTTCCTTCTGTTTGTTGTTTTCCACGGTGTGTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR GCA 90 bp | TCTGCAATACAAGACACGGCAATCACAGTGCAAAACAGTTGGACTTTTCACACTACAGCAAAGCTGAAATaGTTCAATGGCCGTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SAIQDTAITVQNSWTFHTTAKLK*FNGRFL Trigger: GAGAAAACGGCCATTGAAGCATTTCAGCTTTGCTGT...AGTGTGAAAAGTCCAACTGTTTTGCACTGTGATTGCCGTGTCTTGTATTGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR CCA 90 bp | ATAAAACAGACTGAATTCAGGTTTGCAGGTCTAAGGGAACCAAAGACTTCATCCTCCAGTCTGTACAGTTaGGCCAATTTGCCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: IKQTEFRFAGLREPKTSSSSLYS*ANLPNT Trigger: AGTGTTTGGCAAATTGGCCCAACTGTACAGACTGGA...GGATGAAGTCTTTGGTTCCCTTAGACCTGCAAACCTGAATTCAGTCTGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR CCA 90 bp | ACCGTGGAAAACAACAAACAGAAGGAAGGGAACGAATGTTTTACCTTTAGATTTGCTGAAATGCTTCAATaGCCGTTTTCTCCTTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVENNKQKEGNECFTFRFAEMLQ*PFSPSA Trigger: TGCCGAAGGAGAAAACGGCCATTGAAGCATTTCAGC...AAATCTAAAGGTAAAACATTCGTTCCCTTCCTTCTGTTTGTTGTTTTCCACGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR TCA 90 bp | CTTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTTGGTCTTTAATAACATCTCTTTaGTACAGGGGCTTCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCRVADISFSLSSSSLWSLITSL*YRGFFG Trigger: TCCAAAGAAGCCCCTGTATCAAAGAGATGTTATTAA...AGACCAAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
||
| CDS-3UTR CCA 90 bp | ACCGTGGAAAACAACAAACAGAAGGAAGGGAACGAATGTTTTACCTTTAGATTTATCCATATCAGCTCCTaGGTATTTTATCTGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVENNKQKEGNECFTFRFIHISS*VFYLDS Trigger: AGAGTCCAGATAAAATACCCAGGAGCTGATATGGAT...AAATCTAAAGGTAAAACATTCGTTCCCTTCCTTCTGTTTGTTGTTTTCCACGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS GCA 90 bp | TTCCACATTGGCCTCGGTCAGCTGTCTGCGGTGGACGAGGCGGCATaGCGGCACCTCTCCAATAGCAATACTGTGGCGCTTGAACCACAT | + |
|
Preference number: 5 (lower is better) Translates to: FHIGLGQLSAVDEAA*RHLSNSNTVALEPH Trigger: ATGTGGTTCAAGCGCCACAGTATTGCTATTGGAGAGGTGCCGGCATGCCGCCTCGTCCACCGCAGACAGCTGACCGAGGCCAATGTGGAA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
||
| CDS CCA 90 bp | GACTTCCAGATCTCTTCCACATTGGCCTCGGTCAGCTGTCTGCGGTaGACGAGGCGGCATGCCGGCACCTCTCCAATAGCAATACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DFQISSTLASVSCLR*TRRHAGTSPIAILW Trigger: CCACAGTATTGCTATTGGAGAGGTGCCGGCATGCCGCCTCGTCCACCGCAGACAGCTGACCGAGGCCAATGTGGAAGAGATCTGGAAGTC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
||
| CDS-3UTR CAA 90 bp | ATTGCGGGCCCGGGGGCAGATGCACACCATTCCACATCCAGCCACGCGCAGACCTTCTTCTTCTTCTCCTaGCTGGAGAGTTTGTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: IAGPGADAHHSTSSHAQTFFFFS*LESLSS Trigger: CGACGACAAACTCTCCAGCAAGGAGAAGAAGAAGAA...GGTCTGCGCGTGGCTGGATGTGGAATGGTGTGCATCTGCCCCCGGGCCCGCAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS-3UTR CAA 90 bp | GCTCAGCACGAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCATATTGCAAGCTGCGGCTTGGCCTaGGGTTTTTCAGGAAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AQHEESGDRLDAPRLHIASCGLA*GFSGKR Trigger: TCTCTTTCCTGAAAAACCCAAGGCCAAGCCGCAGCT...TGCAATATGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTCGTGCTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
||
| CDS GCA 90 bp | AGCACAGGATGCACCGGGAAAAGGTCTGAACCATCAGTGTGCGGGTaGCGAAGCCATCACTCAGTGGGGGCATCTCCTTGTTTAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: STGCTGKRSEPSVCG*RSHHSVGASPCLGR Trigger: TCTGCCTAAACAAGGAGATGCCCCCACTGAGTGATGGCTTCGGCACCCGCACACTGATGGTTCAGACCTTTTCCCGGTGCATCCTGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
||
| CDS TCA 90 bp | AGCAGCTGGACTGTTTGTTTGCGAGTTACCTCGGGCCCAAAGTTTTaGCTGTTCCGCAGAAGCTCGTGCAGCCAGTCCACAGCCTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSWTVCLRVTSGPKF*LFRRSSCSQSTASD Trigger: ATCGGAGGCTGTGGACTGGCTGCACGAGCTTCTGCGGAACAGTCAAAACTTTGGGCCCGAGGTAACTCGCAAACAAACAGTCCAGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
||
| CDS GCA 90 bp | CTTGCTGGAGAGTTTGTCGTCGGCTATGACTTCTTCCAACAAGGCTaGCAGGGGCTCCTGGGAGCCATACGCCCTTTGGTACTCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: LAGEFVVGYDFFQQG*QGLLGAIRPLVLKL Trigger: GAGTTTGAGTACCAAAGGGCGTATGGCTCCCAGGAGCCCCTGGCAGCCTTGTTGGAAGAAGTCATAGCCGACGACAAACTCTCCAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| CDS CCA 90 bp | CGGTGGACGAGGCGGCATGCCGGCACCTCTCCAATAGCAATACTGTaGCGCTTGAACCACATCTCAGAATTCATCACAATCGGCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RWTRRHAGTSPIAIL*RLNHISEFITIGLT Trigger: AGTGAGGCCGATTGTGATGAATTCTGAGATGTGGTTCAAGCGCCACAGTATTGCTATTGGAGAGGTGCCGGCATGCCGCCTCGTCCACCG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS-3UTR CAA 90 bp | GCTCAGCACGAGGAGTCGGGCGATCGGCTGGATGCTCCGAGACTCCATATTGCATTCTTCTTCTTCTCCTaGCTGGAGAGTTTGTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: AQHEESGDRLDAPRLHIAFFFFS*LESLSS Trigger: CGACGACAAACTCTCCAGCAAGGAGAAGAAGAAGAA...TGCAATATGGAGTCTCGGAGCATCCAGCCGATCGCCCGACTCCTCGTGCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
||
| CDS CCA 90 bp | TTGTCGTCGGCTATGACTTCTTCCAACAAGGCTGCCAGGGGCTCCTaGGAGCCATACGCCCTTTGGTACTCAAACTCCTCGGGACTAATT | + |
|
Preference number: 5 (lower is better) Translates to: LSSAMTSSNKAARGS*EPYALWYSNSSGLI Trigger: AATTAGTCCCGAGGAGTTTGAGTACCAAAGGGCGTATGGCTCCCAGGAGCCCCTGGCAGCCTTGTTGGAAGAAGTCATAGCCGACGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
||
| CDS GCA 90 bp | CATGAACAGCTGCGGCTTGGCCTTGGGTTTTTCAGGAAAGAGAAGTaGTTCGCTCTCTGGGGTAGGAAATCGTTCCTGGTAGACCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HEQLRLGLGFFRKEK*FALWGRKSFLVDLR Trigger: CCTGAGGTCTACCAGGAACGATTTCCTACCCCAGAGAGCGAAGCACTTCTCTTTCCTGAAAAACCCAAGGCCAAGCCGCAGCTGTTCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS GCA 90 bp | CCGGAAACTTCTAGTTCTCTGAAACGGCTGGAAGGGCTTCCTCAGTaGCCACATGAACAGCTGCGGCTTGGCCTTGGGTTTTTCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PETSSSLKRLEGLPQ*PHEQLRLGLGFFRK Trigger: TTTCCTGAAAAACCCAAGGCCAAGCCGCAGCTGTTCATGTGGGCACTGAGGAAGCCCTTCCAGCCGTTTCAGAGAACTAGAAGTTTCCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS-3UTR CAA 90 bp | CGAGAGCAGGGGGCACACACAAGGACTTTACACACCGTGGAAAACAACAAACAGCAGCAGCTGGACTGTTaGTTTGCGAGTTACCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: REQGAHTRTLHTVENNKQQQLDC*FASYLG Trigger: CCCGAGGTAACTCGCAAACAAACAGTCCAGCTGCTG...CTGTTTGTTGTTTTCCACGGTGTGTAAAGTCCTTGTGTGTGCCCCCTGCTCTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR CAA 90 bp | ATGTACAGTATTCCTAGGCTTGGTTTTCACAGACGCACACGAGAGCAGGGGGCAAGCTGCGGCTTGGCCTaGGGTTTTTCAGGAAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: MYSIPRLGFHRRTREQGASCGLA*GFSGKR Trigger: TCTCTTTCCTGAAAAACCCAAGGCCAAGCCGCAGCT...TGCCCCCTGCTCTCGTGTGCGTCTGTGAAAACCAAGCCTAGGAATACTGTACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
||
| CDS CCA 90 bp | CGGCTTGGCCTTGGGTTTTTCAGGAAAGAGAAGTGCTTCGCTCTCTaGGGTAGGAAATCGTTCCTGGTAGACCTCAGGGTAAGATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLGLGFFRKEKCFAL*GRKSFLVDLRVRFL Trigger: CAGAAATCTTACCCTGAGGTCTACCAGGAACGATTTCCTACCCCAGAGAGCGAAGCACTTCTCTTTCCTGAAAAACCCAAGGCCAAGCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CCA 90 bp | GGTATTTTATCTGGACTCTTCGCAGATGAGCCACACGCTCTTCTATaGAGGTCTGCAGGGCCAGAGGCACTTTCAGAATCTCCTGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: GILSGLFADEPHALL*RSAGPEALSESPGN Trigger: ATTACCAGGAGATTCTGAAAGTGCCTCTGGCCCTGCAGACCTCCATAGAAGAGCGTGTGGCTCATCTGCGAAGAGTCCAGATAAAATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| CDS CCA 90 bp | ATTTCTGAAACTGGACTCTTCGCAGATGAGCCACACGCTCTTCTATaGAGGTCTGCAGGGCCAGAGGCACTTTCAGAATCTCCTGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: ISETGLFADEPHALL*RSAGPEALSESPGN Trigger: ATTACCAGGAGATTCTGAAAGTGCCTCTGGCCCTGCAGACCTCCATAGAAGAGCGTGTGGCTCATCTGCGAAGAGTCCAGTTTCAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171178.2 |
||
| CDS TCA 90 bp | TGGGAGCCATACGCCCTTTGGTACTCAAACTCCTCGGGACTAATTTaGCGGCAAAACGAAGGTGCAGACAGAGTGATATCCATATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WEPYALWYSNSSGLI*RQNEGADRVISISA Trigger: AGCTGATATGGATATCACTCTGTCTGCACCTTCGTTTTGCCGTCAAATTAGTCCCGAGGAGTTTGAGTACCAAAGGGCGTATGGCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| CDS CCA 90 bp | TCGTCCAGGATGACCACTCCCTGCTTGCTGACACTGTACACGTTATaGATGATGAACTTGGAGCTGACCAGCTTGGTGTTTAAAACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRMTTPCLLTLYTL*MMNLELTSLVFKTS Trigger: GGAAGTTTTAAACACCAAGCTGGTCAGCTCCAAGTTCATCATCCATAACGTGTACAGTGTCAGCAAGCAGGGAGTGGTCATCCTGGACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS TCA 90 bp | CATCTCAGAATTCATCACAATCGGCCTCACTGGAATGTTCTCCTGTaGAGTGCCCGGTGGGGGATCGTTCCATTCTGGAAACTTAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: HLRIHHNRPHWNVLL*SARWGIVPFWKLNN Trigger: GTTATTAAGTTTCCAGAATGGAACGATCCCCCACCGGGCACTTCACAGGAGAACATTCCAGTGAGGCCGATTGTGATGAATTCTGAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS-3UTR CAA 90 bp | CTTTCCTTTGTAGAGTTGCAGACATCTCTTTTTCTCTCTCATCGTCAAGCCTTTCAGCAGCTGGACTGTTaGTTTGCGAGTTACCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSFVELQTSLFLSHRQAFQQLDC*FASYLG Trigger: CCCGAGGTAACTCGCAAACAAACAGTCCAGCTGCTG...AAAGGCTTGACGATGAGAGAGAAAAAGAGATGTCTGCAACTCTACAAAGGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR CAA 90 bp | ATAAAACAGACTGAATTCAGGTTTGCAGGTCTAAGGGAACCAAAGACTTCATCCCAGATCTCTTCCACATaGGCCTCGGTCAGCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IKQTEFRFAGLREPKTSSQISST*ASVSCL Trigger: CAGACAGCTGACCGAGGCCAATGTGGAAGAGATCTG...GGATGAAGTCTTTGGTTCCCTTAGACCTGCAAACCTGAATTCAGTCTGTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS-3UTR CAA 90 bp | CTTGTGATTGATGTATTCACGGAATTCCAAAGGCAAATCACTGAAGATCCAGGCATGACCACTCCCTGCTaGCTGACACTGTACACGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LVIDVFTEFQRQITEDPGMTTPC*LTLYTL Trigger: TAACGTGTACAGTGTCAGCAAGCAGGGAGTGGTCAT...GCCTGGATCTTCAGTGATTTGCCTTTGGAATTCCGTGAATACATCAATCACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS GCA 90 bp | TTGGTACTCAAACTCCTCGGGACTAATTTGACGGCAAAACGAAGGTaGAGACAGAGTGATATCCATATCAGCTCCTGGGTATTTTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVLKLLGTNLTAKRR*RQSDIHISSWVFYL Trigger: CAGATAAAATACCCAGGAGCTGATATGGATATCACTCTGTCTGCACCTTCGTTTTGCCGTCAAATTAGTCCCGAGGAGTTTGAGTACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| CDS-3UTR CAA 90 bp | CTTGTGATTGATGTATTCACGGAATTCCAAAGGCAAATCACTGAAGATCCAGGCGCAATACTGTGGCGCTaGAACCACATCTCAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LVIDVFTEFQRQITEDPGAILWR*NHISEF Trigger: GAATTCTGAGATGTGGTTCAAGCGCCACAGTATTGC...GCCTGGATCTTCAGTGATTTGCCTTTGGAATTCCGTGAATACATCAATCACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163307.8 |
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| CDS-3UTR CAA 90 bp | TGTTCTCATTCAAGTATGTACAGTATTCCTAGGCTTGGTTTTCACAGACGCACAATGACCACTCCCTGCTaGCTGACACTGTACACGTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSHSSMYSIPRLGFHRRTMTTPC*LTLYTL Trigger: TAACGTGTACAGTGTCAGCAAGCAGGGAGTGGTCAT...TGTGCGTCTGTGAAAACCAAGCCTAGGAATACTGTACATACTTGAATGAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS GCA 90 bp | GCTATAGTCTTAAAGACATCCTTCTCAAATCCCAAGTACATAGGCTaGTTCCAGTCTGTACAGTTGGGCCAATTTGCCAAACACTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: AIVLKTSFSNPKYIG*FQSVQLGQFAKHFI Trigger: TATGAAGTGTTTGGCAAATTGGCCCAACTGTACAGACTGGAAGCAGCCTATGTACTTGGGATTTGAGAAGGATGTCTTTAAGACTATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS GCA 90 bp | GAGATGAAATGTGAGCAGTGGCTCCTTCAGGTGACCATAGTAATCTaGTATAGTCTTAAAGACATCCTTCTCAAATCCCAAGTACATAGG | + |
|
Preference number: 5 (lower is better) Translates to: EMKCEQWLLQVTIVI*YSLKDILLKSQVHR Trigger: CCTATGTACTTGGGATTTGAGAAGGATGTCTTTAAGACTATAGCAGATTACTATGGTCACCTGAAGGAGCCACTGCTCACATTTCATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS-3UTR CAA 90 bp | ACCGTGGAAAACAACAAACAGAAGGAAGGGAACGAATGTTTTACCTTTAGATTTGCAATACTGTGGCGCTaGAACCACATCTCAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: TVENNKQKEGNECFTFRFAILWR*NHISEF Trigger: GAATTCTGAGATGTGGTTCAAGCGCCACAGTATTGC...AAATCTAAAGGTAAAACATTCGTTCCCTTCCTTCTGTTTGTTGTTTTCCACGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051594.12 |
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| CDS GCA 72 bp | GGCCTCGGTCAGCTGTCTGCGGTGGACGAGGCGGCATaGCGGCACCTCTCCAATAGCAATACTGTGGCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GLGQLSAVDEAA*RHLSNSNTVAL Trigger: AAGCGCCACAGTATTGCTATTGGAGAGGTGCCGGCATGCCGCCTCGTCCACCGCAGACAGCTGACCGAGGCC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS GCA 72 bp | TCCAGATCTCTTCCACATTGGCCTCGGTCAGCTGTCTaGGGTGGACGAGGCGGCATGCCGGCACCTCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SRSLPHWPRSAV*GGRGGMPAPLQ Trigger: TTGGAGAGGTGCCGGCATGCCGCCTCGTCCACCGCAGACAGCTGACCGAGGCCAATGTGGAAGAGATCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CCA 72 bp | ATCTCTTCCACATTGGCCTCGGTCAGCTGTCTGCGGTaGACGAGGCGGCATGCCGGCACCTCTCCAATAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ISSTLASVSCLR*TRRHAGTSPIA Trigger: TGCTATTGGAGAGGTGCCGGCATGCCGCCTCGTCCACCGCAGACAGCTGACCGAGGCCAATGTGGAAGAGAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS GCA 72 bp | TGCACCGGGAAAAGGTCTGAACCATCAGTGTGCGGGTaGCGAAGCCATCACTCAGTGGGGGCATCTCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CTGKRSEPSVCG*RSHHSVGASPC Trigger: ACAAGGAGATGCCCCCACTGAGTGATGGCTTCGGCACCCGCACACTGATGGTTCAGACCTTTTCCCGGTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 90 bp | CAGCAGCTGGACTGTTTGTTTGCGAGTTACCTCGGGCCCAAAGTTTaGACTGTTCCGCAGAAGCTCGTGCAGCCAGTCCACAGCCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: QQLDCLFASYLGPKV*TVPQKLVQPVHSLR Trigger: TCGGAGGCTGTGGACTGGCTGCACGAGCTTCTGCGGAACAGTCAAAACTTTGGGCCCGAGGTAACTCGCAAACAAACAGTCCAGCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 90 bp | AACGGCTGGAAGGGCTTCCTCAGTGCCCACATGAACAGCTGCGGCTaGGCCTTGGGTTTTTCAGGAAAGAGAAGTGCTTCGCTCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: NGWKGFLSAHMNSCG*ALGFSGKRSASLSG Trigger: CCCAGAGAGCGAAGCACTTCTCTTTCCTGAAAAACCCAAGGCCAAGCCGCAGCTGTTCATGTGGGCACTGAGGAAGCCCTTCCAGCCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS GCA 72 bp | GAGTTTGTCGTCGGCTATGACTTCTTCCAACAAGGCTaGCAGGGGCTCCTGGGAGCCATACGCCCTTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: EFVVGYDFFQQG*QGLLGAIRPLV Trigger: TACCAAAGGGCGTATGGCTCCCAGGAGCCCCTGGCAGCCTTGTTGGAAGAAGTCATAGCCGACGACAAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| CDS CCA 72 bp | GCTATGACTTCTTCCAACAAGGCTGCCAGGGGCTCCTaGGAGCCATACGCCCTTTGGTACTCAAACTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: AMTSSNKAARGS*EPYALWYSNSS Trigger: CGAGGAGTTTGAGTACCAAAGGGCGTATGGCTCCCAGGAGCCCCTGGCAGCCTTGTTGGAAGAAGTCATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| CDS CAA 72 bp | TATGACAACGTCGTAGACTTCCAGATCTCTTCCACATaGGCCTCGGTCAGCTGTCTGCGGTGGACGAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: YDNVVDFQISST*ASVSCLRWTRR Trigger: CCGCCTCGTCCACCGCAGACAGCTGACCGAGGCCAATGTGGAAGAGATCTGGAAGTCTACGACGTTGTCATA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 72 bp | CGGGTGCCGAAGCCATCACTCAGTGGGGGCATCTCCTaGTTTAGGCAGATCCTCGCCATCATCCTCATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RVPKPSLSGGIS*FRQILAIILIN Trigger: GTTGATGAGGATGATGGCGAGGATCTGCCTAAACAAGGAGATGCCCCCACTGAGTGATGGCTTCGGCACCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 90 bp | TTCTGTAAATATGACAACGTCGTAGACTTCCAGATCTCTTCCACATaGGCCTCGGTCAGCTGTCTGCGGTGGACGAGGCGGCATGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: FCKYDNVVDFQISST*ASVSCLRWTRRHAG Trigger: GCCGGCATGCCGCCTCGTCCACCGCAGACAGCTGACCGAGGCCAATGTGGAAGAGATCTGGAAGTCTACGACGTTGTCATATTTACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 90 bp | TGGAAGGGCTTCCTCAGTGCCCACATGAACAGCTGCGGCTTGGCCTaGGGTTTTTCAGGAAAGAGAAGTGCTTCGCTCTCTGGGGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WKGFLSAHMNSCGLA*GFSGKRSASLSGVG Trigger: TCCTACCCCAGAGAGCGAAGCACTTCTCTTTCCTGAAAAACCCAAGGCCAAGCCGCAGCTGTTCATGTGGGCACTGAGGAAGCCCTTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS TCA 72 bp | TCTGAAACGGCTGGAAGGGCTTCCTCAGTGCCCACATaGACAGCTGCGGCTTGGCCTTGGGTTTTTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SETAGRASSVPT*TAAAWPWVFQE Trigger: TTCCTGAAAAACCCAAGGCCAAGCCGCAGCTGTTCATGTGGGCACTGAGGAAGCCCTTCCAGCCGTTTCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 90 bp | TTCTTCCAACAAGGCTGCCAGGGGCTCCTGGGAGCCATACGCCCTTaGGTACTCAAACTCCTCGGGACTAATTTGACGGCAAAACGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: FFQQGCQGLLGAIRP*VLKLLGTNLTAKRR Trigger: CCTTCGTTTTGCCGTCAAATTAGTCCCGAGGAGTTTGAGTACCAAAGGGCGTATGGCTCCCAGGAGCCCCTGGCAGCCTTGTTGGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
||
| CDS TCA 72 bp | TCAGCTCCTGGGTATTTTATCTGGACTCTTCGCAGATaGGCCACACGCTCTTCTATGGAGGTCTGCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SAPGYFIWTLRR*ATRSSMEVCRA Trigger: GGCCCTGCAGACCTCCATAGAAGAGCGTGTGGCTCATCTGCGAAGAGTCCAGATAAAATACCCAGGAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
||
| CDS CCA 72 bp | TCTGGACTCTTCGCAGATGAGCCACACGCTCTTCTATaGAGGTCTGCAGGGCCAGAGGCACTTTCAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: SGLFADEPHALL*RSAGPEALSES Trigger: AGATTCTGAAAGTGCCTCTGGCCCTGCAGACCTCCATAGAAGAGCGTGTGGCTCATCTGCGAAGAGTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
||
| CDS CCA 72 bp | ACTGGACTCTTCGCAGATGAGCCACACGCTCTTCTATaGAGGTCTGCAGGGCCAGAGGCACTTTCAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: TGLFADEPHALL*RSAGPEALSES Trigger: AGATTCTGAAAGTGCCTCTGGCCCTGCAGACCTCCATAGAAGAGCGTGTGGCTCATCTGCGAAGAGTCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171178.2 |
||
| CDS CAA 72 bp | GACTGTTTGTTTGCGAGTTACCTCGGGCCCAAAGTTTaGACTGTTCCGCAGAAGCTCGTGCAGCCAGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DCLFASYLGPKV*TVPQKLVQPVH Trigger: GTGGACTGGCTGCACGAGCTTCTGCGGAACAGTCAAAACTTTGGGCCCGAGGTAACTCGCAAACAAACAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 90 bp | ACGAGGCGGCATGCCGGCACCTCTCCAATAGCAATACTGTGGCGCTaGAACCACATCTCAGAATTCATCACAATCGGCCTCACTGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: TRRHAGTSPIAILWR*NHISEFITIGLTGM Trigger: CATTCCAGTGAGGCCGATTGTGATGAATTCTGAGATGTGGTTCAAGCGCCACAGTATTGCTATTGGAGAGGTGCCGGCATGCCGCCTCGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS TCA 72 bp | ACTGTTTGTTTGCGAGTTACCTCGGGCCCAAAGTTTTaGCTGTTCCGCAGAAGCTCGTGCAGCCAGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: TVCLRVTSGPKF*LFRRSSCSQST Trigger: TGTGGACTGGCTGCACGAGCTTCTGCGGAACAGTCAAAACTTTGGGCCCGAGGTAACTCGCAAACAAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS TCA 72 bp | TTGATACAGGGGCTTCTTTGGATATGGCTTCAGGGGTaGGGAGGGAGGAAATCTGTAGAGGTGACGGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LIQGLLWIWLQG*GGRKSVEVTVV Trigger: GACAACCGTCACCTCTACAGATTTCCTCCCTCCTCACCCCTGAAGCCATATCCAAAGAAGCCCCTGTATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS TCA 72 bp | ATTCATCACAATCGGCCTCACTGGAATGTTCTCCTGTaGAGTGCCCGGTGGGGGATCGTTCCATTCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: IHHNRPHWNVLL*SARWGIVPFWK Trigger: TTTCCAGAATGGAACGATCCCCCACCGGGCACTTCACAGGAGAACATTCCAGTGAGGCCGATTGTGATGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CCA 72 bp | AGGCGGCATGCCGGCACCTCTCCAATAGCAATACTGTaGCGCTTGAACCACATCTCAGAATTCATCACAATC | + |
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Preference number: 6 (lower is better) Translates to: RRHAGTSPIAIL*RLNHISEFITI Trigger: GATTGTGATGAATTCTGAGATGTGGTTCAAGCGCCACAGTATTGCTATTGGAGAGGTGCCGGCATGCCGCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 72 bp | CATGCCGGCACCTCTCCAATAGCAATACTGTGGCGCTaGAACCACATCTCAGAATTCATCACAATCGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: HAGTSPIAILWR*NHISEFITIGL Trigger: GAGGCCGATTGTGATGAATTCTGAGATGTGGTTCAAGCGCCACAGTATTGCTATTGGAGAGGTGCCGGCATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 90 bp | CTGGGAGCCATACGCCCTTTGGTACTCAAACTCCTCGGGACTAATTaGACGGCAAAACGAAGGTGCAGACAGAGTGATATCCATATCAGC | + |
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Preference number: 6 (lower is better) Translates to: LGAIRPLVLKLLGTN*TAKRRCRQSDIHIS Trigger: GCTGATATGGATATCACTCTGTCTGCACCTTCGTTTTGCCGTCAAATTAGTCCCGAGGAGTTTGAGTACCAAAGGGCGTATGGCTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 |
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| CDS CCA 72 bp | CTTGGGTTTTTCAGGAAAGAGAAGTGCTTCGCTCTCTaGGGTAGGAAATCGTTCCTGGTAGACCTCAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: LGFFRKEKCFAL*GRKSFLVDLRV Trigger: TACCCTGAGGTCTACCAGGAACGATTTCCTACCCCAGAGAGCGAAGCACTTCTCTTTCCTGAAAAACCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS TCA 72 bp | CAATTTGCCAAACACTTCATAGCTGACAGGACCCAGTaGGGAAGTTCTTTCGACTTGTCGTCCAGGATGACC | + |
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Preference number: 6 (lower is better) Translates to: QFAKHFIADRTQ*GSSFDLSSRMT Trigger: GGTCATCCTGGACGACAAGTCGAAAGAACTTCCTCACTGGGTCCTGTCAGCTATGAAGTGTTTGGCAAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS GCA 72 bp | TCTTCAGGAATTTTCCCAGCAGCTGGACTGTTTGTTTaGGAGTTACCTCGGGCCCAAAGTTTTGACTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSGIFPAAGLFV*ELPRAQSFDCS Trigger: GGAACAGTCAAAACTTTGGGCCCGAGGTAACTCGCAAACAAACAGTCCAGCTGCTGGGAAAATTCCTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS GCA 72 bp | AGTTCTTTCGACTTGTCGTCCAGGATGACCACTCCCTaGTTGCTGACACTGTACACGTTATGGATGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: SSFDLSSRMTTP*LLTLYTLWMMN Trigger: GTTCATCATCCATAACGTGTACAGTGTCAGCAAGCAGGGAGTGGTCATCCTGGACGACAAGTCGAAAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 72 bp | TCTTTCGACTTGTCGTCCAGGATGACCACTCCCTGCTaGCTGACACTGTACACGTTATGGATGATGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SFDLSSRMTTPC*LTLYTLWMMNL Trigger: CAAGTTCATCATCCATAACGTGTACAGTGTCAGCAAGCAGGGAGTGGTCATCCTGGACGACAAGTCGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 90 bp | ACCACTCCCTGCTTGCTGACACTGTACACGTTATGGATGATGAACTaGGAGCTGACCAGCTTGGTGTTTAAAACTTCCTCCAAGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: TTPCLLTLYTLWMMN*ELTSLVFKTSSKES Trigger: GGATTCCTTGGAGGAAGTTTTAAACACCAAGCTGGTCAGCTCCAAGTTCATCATCCATAACGTGTACAGTGTCAGCAAGCAGGGAGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 72 bp | ATGATTCTTCAGGAATTTTCCCAGCAGCTGGACTGTTaGTTTGCGAGTTACCTCGGGCCCAAAGTTTTGACT | + |
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Preference number: 6 (lower is better) Translates to: MILQEFSQQLDC*FASYLGPKVLT Trigger: AGTCAAAACTTTGGGCCCGAGGTAACTCGCAAACAAACAGTCCAGCTGCTGGGAAAATTCCTGAAGAATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 72 bp | TACACGTTATGGATGATGAACTTGGAGCTGACCAGCTaGGTGTTTAAAACTTCCTCCAAGGAATCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: YTLWMMNLELTS*VFKTSSKESRP Trigger: TGGCCTGGATTCCTTGGAGGAAGTTTTAAACACCAAGCTGGTCAGCTCCAAGTTCATCATCCATAACGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 72 bp | TGCTTGCTGACACTGTACACGTTATGGATGATGAACTaGGAGCTGACCAGCTTGGTGTTTAAAACTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CLLTLYTLWMMN*ELTSLVFKTSS Trigger: GGAGGAAGTTTTAAACACCAAGCTGGTCAGCTCCAAGTTCATCATCCATAACGTGTACAGTGTCAGCAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS CAA 90 bp | CTGACACTGTACACGTTATGGATGATGAACTTGGAGCTGACCAGCTaGGTGTTTAAAACTTCCTCCAAGGAATCCAGGCCAAGAATTTTC | + |
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Preference number: 6 (lower is better) Translates to: LTLYTLWMMNLELTS*VFKTSSKESRPRIF Trigger: GAAAATTCTTGGCCTGGATTCCTTGGAGGAAGTTTTAAACACCAAGCTGGTCAGCTCCAAGTTCATCATCCATAACGTGTACAGTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS TCA 72 bp | GGATCGTTCCATTCTGGAAACTTAATAACATCTCTTTaGTACAGGGGCTTCTTTGGATATGGCTTCAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: GSFHSGNLITSL*YRGFFGYGFRG Trigger: ACCCCTGAAGCCATATCCAAAGAAGCCCCTGTATCAAAGAGATGTTATTAAGTTTCCAGAATGGAACGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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| CDS GCA 72 bp | TGTGAGCAGTGGCTCCTTCAGGTGACCATAGTAATCTaGTATAGTCTTAAAGACATCCTTCTCAAATCCCAA | + |
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Preference number: 6 (lower is better) Translates to: CEQWLLQVTIVI*YSLKDILLKSQ Trigger: TTGGGATTTGAGAAGGATGTCTTTAAGACTATAGCAGATTACTATGGTCACCTGAAGGAGCCACTGCTCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051594.12 ENSMUST00000163307.8 ENSMUST00000171178.2 |
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