Pregenerated sensors for DENND6B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015377Ensembl transcript IDs: ENSMUST00000078953.9, ENSMUST00000229755.2
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAGCCAGTCACCCTTGAGGATGCAGGTGAGCTGGGGTCCCGCATaGTCCAGGCTTCGCAGGAAATCGTCCTGGCGGAAGGGGCAGATC | + |
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Preference number: 1 (lower is better) Translates to: PSQSPLRMQVSWGPA*SRLRRKSSWRKGQI Trigger: GATCTGCCCCTTCCGCCAGGACGATTTCCTGCGAAGCCTGGAGCATGCGGGACCCCAGCTCACCTGCATCCTCAAGGGTGACTGGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR CCA 90 bp | GCGGGGAAGCCTGCTGGGCTAAAGGACCCCCAACACAAGGCATCCTaGAGTGTGGGCAGATGGAGCCAGGAGGCAGCAGGTGGTGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: AGKPAGLKDPQHKAS*SVGRWSQEAAGGEG Trigger: GCCTTCACCACCTGCTGCCTCCTGGCTCCATCTGCCCACACTCCAGGATGCCTTGTGTTGGGGGTCCTTTAGCCCAGCAGGCTTCCCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR TCA 90 bp | GAGTCCTCCTGTCCTTCCGGTCTGTCCCTGGGGCTGGCTGCCTCATaGCCTCCACCCAACCCTCTTAGATCCCCTGAATGCTGGCTCACT | + |
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Preference number: 1 (lower is better) Translates to: ESSCPSGLSLGLAAS*PPPNPLRSPECWLT Trigger: AGTGAGCCAGCATTCAGGGGATCTAAGAGGGTTGGGTGGAGGTCATGAGGCAGCCAGCCCCAGGGACAGACCGGAAGGACAGGAGGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CCA 90 bp | AGTAGGGGCGGAAGTCACAGCAGAACTTCAGGGGCTGGAGGCAGCTaGTTAGGGCTAGCACCAGCTCTGAAGACACGTCGGGTGAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: SRGGSHSRTSGAGGS*LGLAPALKTRRVRV Trigger: CACCCTCACCCGACGTGTCTTCAGAGCTGGTGCTAGCCCTAACCAGCTGCCTCCAGCCCCTGAAGTTCTGCTGTGACTTCCGCCCCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR TCA 90 bp | CCTGCCAGAGGCTCCTTTGTCCCCCACACTGACGCATACGGAAACTaGACTGAGTGTCTCCCAGGCACCCTGAGTGCGAGTCTGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: PARGSFVPHTDAYGN*TECLPGTLSASLGR Trigger: CCTTCCCAGACTCGCACTCAGGGTGCCTGGGAGACACTCAGTTCAGTTTCCGTATGCGTCAGTGTGGGGGACAAAGGAGCCTCTGGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR TCA 90 bp | ACAGACAGAGAAGAGGCAGAGACAGGCCTAGAGGCAGGCAGTGTGTaGGCAGGGTGCGAGGACGCGTACTTACGGAGCCTGGGTTCGAGT | + |
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Preference number: 1 (lower is better) Translates to: TDREEAETGLEAGSV*AGCEDAYLRSLGSS Trigger: ACTCGAACCCAGGCTCCGTAAGTACGCGTCCTCGCACCCTGCTCACACACTGCCTGCCTCTAGGCCTGTCTCTGCCTCTTCTCTGTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR TCA 90 bp | GGGGCTCTGAGACAAAGGTCACATGAGCTGGGTGCTACTGAGCCATaGGCACAGGTCCTCCTTTTCAGCGGGATGGGACCCTCCCTCGAG | + |
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Preference number: 1 (lower is better) Translates to: GALRQRSHELGATEP*AQVLLFSGMGPSLE Trigger: CTCGAGGGAGGGTCCCATCCCGCTGAAAAGGAGGACCTGTGCTCATGGCTCAGTAGCACCCAGCTCATGTGACCTTTGTCTCAGAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR GCA 90 bp | AGCACCACGAGGGGCTCCCCAAGAAGCATGAGTTCCCACAGGGTCTaGACGTGGGTGAGCACTGGCCGGAAGCACCTAAACAGATCCAGT | + |
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Preference number: 1 (lower is better) Translates to: STTRGSPRSMSSHRV*TWVSTGRKHLNRSS Trigger: ACTGGATCTGTTTAGGTGCTTCCGGCCAGTGCTCACCCACGTGCAGACCCTGTGGGAACTCATGCTTCTTGGGGAGCCCCTCGTGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR TCA 90 bp | ACAGCCGGGGAGCTCCAGCTGTCACAGAGGATGGTGCCATGGTTCTaGAGATCCCTTAGAGACCAGGCTCTTAGTGGTGAGGCTGGCACC | + |
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Preference number: 1 (lower is better) Translates to: TAGELQLSQRMVPWF*RSLRDQALSGEAGT Trigger: GGTGCCAGCCTCACCACTAAGAGCCTGGTCTCTAAGGGATCTTCAGAACCATGGCACCATCCTCTGTGACAGCTGGAGCTCCCCGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR GCA 90 bp | GAGACCCACCTACAGGTTTCTGATACTCAGCTGAGGGTTGGCTGCTaGTCCAGGTCCTCACTTCAGTCTGGACCACCCCAAGGGCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: ETHLQVSDTQLRVGC*SRSSLQSGPPQGPG Trigger: ACCTGGCCCTTGGGGTGGTCCAGACTGAAGTGAGGACCTGGAGCAGCAGCCAACCCTCAGCTGAGTATCAGAAACCTGTAGGTGGGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR GCA 90 bp | CAGGAGACCCACCTACAGGTTTCTGATACTCAGCTGAGGGTTGGCTaGTGCTCCAGGTCCTCACTTCAGTCTGGACCACCCCAAGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: QETHLQVSDTQLRVG*CSRSSLQSGPPQGP Trigger: TGGCCCTTGGGGTGGTCCAGACTGAAGTGAGGACCTGGAGCAGCAGCCAACCCTCAGCTGAGTATCAGAAACCTGTAGGTGGGTCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR GCA 90 bp | TCGCTGCCTGGTGGGGGACGCCTGACAGGCACAGAGTCAACTTTGTaGCCTCGTGGCTCTGTATCTCAGCCACGCTCTCTGTTACATGTG | + |
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Preference number: 1 (lower is better) Translates to: SLPGGGRLTGTESTL*PRGSVSQPRSLLHV Trigger: CACATGTAACAGAGAGCGTGGCTGAGATACAGAGCCACGAGGGCACAAAGTTGACTCTGTGCCTGTCAGGCGTCCCCCACCAGGCAGCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR CCA 90 bp | GGGCTAAAGGACCCCCAACACAAGGCATCCTGGAGTGTGGGCAGATaGAGCCAGGAGGCAGCAGGTGGTGAAGGCACCTACATCAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: GLKDPQHKASWSVGR*SQEAAGGEGTYISK Trigger: CTTACTGATGTAGGTGCCTTCACCACCTGCTGCCTCCTGGCTCCATCTGCCCACACTCCAGGATGCCTTGTGTTGGGGGTCCTTTAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CCA 90 bp | ACGAGGGGCTCCCCAAGAAGCATGAGTTCCCACAGGGTCTGCACGTaGGTGAGCACTGGCCGGAAGCACCTAAACAGATCCAGTTCATGG | + |
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Preference number: 1 (lower is better) Translates to: TRGSPRSMSSHRVCT*VSTGRKHLNRSSSW Trigger: CCATGAACTGGATCTGTTTAGGTGCTTCCGGCCAGTGCTCACCCACGTGCAGACCCTGTGGGAACTCATGCTTCTTGGGGAGCCCCTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR GCA 90 bp | AAACTCTGTGTGAGCTCTAGAAGGTGCCGCCTCAGCAGGGCACTCTaGACATCCCATGGCCGCTTCTTCTGTACGCCCTTGAGCAGTCGT | + |
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Preference number: 1 (lower is better) Translates to: KLCVSSRRCRLSRAL*TSHGRFFCTPLSSR Trigger: ACGACTGCTCAAGGGCGTACAGAAGAAGCGGCCATGGGATGTGCAGAGTGCCCTGCTGAGGCGGCACCTTCTAGAGCTCACACAGAGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR CCA 90 bp | ATGATGGGTAGGTTCAGGGTCTGCCCAGGCACCGGCGCTGGCCATTaGTCAATCTCATTACAAACTGCTTCCAGGCAGGGTGCCAACTTC | + |
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Preference number: 1 (lower is better) Translates to: MMGRFRVCPGTGAGH*SISLQTASRQGANF Trigger: GAAGTTGGCACCCTGCCTGGAAGCAGTTTGTAATGAGATTGACCAATGGCCAGCGCCGGTGCCTGGGCAGACCCTGAACCTACCCATCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR GCA 90 bp | TTGCAAGTGGGGTGCCAGGCCCCCACACCATCCCTCATTCTCTCATaGTGGCCAATCACAGCAGGAAGGAGAATTAGATCCTCTCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: LQVGCQAPTPSLILS*WPITAGRRIRSSQD Trigger: GTCCTGAGAGGATCTAATTCTCCTTCCTGCTGTGATTGGCCAGCATGAGAGAATGAGGGATGGTGTGGGGGCCTGGCACCCCACTTGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CCA 90 bp | ACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAACTaGCCACACAAGGGAGCTCTGGGAATCACAATCTCCAGGATTAGC | + |
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Preference number: 1 (lower is better) Translates to: TLLDPLNAGSLRSPN*PHKGALGITISRIS Trigger: GCTAATCCTGGAGATTGTGATTCCCAGAGCTCCCTTGTGTGGCCAGTTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CCA 90 bp | CCCAAGAAGCATGAGTTCCCACAGGGTCTGCACGTGGGTGAGCACTaGCCGGAAGCACCTAAACAGATCCAGTTCATGGACACTAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: PKKHEFPQGLHVGEH*PEAPKQIQFMDTSE Trigger: CTCACTAGTGTCCATGAACTGGATCTGTTTAGGTGCTTCCGGCCAGTGCTCACCCACGTGCAGACCCTGTGGGAACTCATGCTTCTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR GCA 90 bp | CTGCCCAGGCACCGGCGCTGGCCATTGGTCAATCTCATTACAAACTaGTTCCAGGCAGGGTGCCAACTTCTCAAAGTATTCAGGGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: LPRHRRWPLVNLITN*FQAGCQLLKVFRGN Trigger: ATTGCCCCTGAATACTTTGAGAAGTTGGCACCCTGCCTGGAAGCAGTTTGTAATGAGATTGACCAATGGCCAGCGCCGGTGCCTGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR CCA 90 bp | CAAGTGGGGTGCCAGGCCCCCACACCATCCCTCATTCTCTCATGCTaGCCAATCACAGCAGGAAGGAGAATTAGATCCTCTCAGGACAAA | + |
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Preference number: 1 (lower is better) Translates to: QVGCQAPTPSLILSC*PITAGRRIRSSQDK Trigger: TTTGTCCTGAGAGGATCTAATTCTCCTTCCTGCTGTGATTGGCCAGCATGAGAGAATGAGGGATGGTGTGGGGGCCTGGCACCCCACTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CCA 90 bp | AGCCATCTGTCTCGACATCCCTCCAGGCTCTGCCCTTGGCATGGATaGAAAGAGATGGGCTTGAGCCTACTTTGGACAGAAGCTCCACTA | + |
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Preference number: 1 (lower is better) Translates to: SHLSRHPSRLCPWHG*KEMGLSLLWTEAPL Trigger: TAGTGGAGCTTCTGTCCAAAGTAGGCTCAAGCCCATCTCTTTCCATCCATGCCAAGGGCAGAGCCTGGAGGGATGTCGAGACAGATGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CCA 90 bp | GCTGTCCTTCACCTGTCTGAAGTACACATAGCCCAGATAGTGTGCTaGCTCCCTCTGCAATGCCAAGGGGGCCTTGTTGTTATACGACCG | + |
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Preference number: 1 (lower is better) Translates to: AVLHLSEVHIAQIVC*LPLQCQGGLVVIRP Trigger: CGGTCGTATAACAACAAGGCCCCCTTGGCATTGCAGAGGGAGCCAGCACACTATCTGGGCTATGTGTACTTCAGACAGGTGAAGGACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR TCA 90 bp | GCCAACTTCTCAAAGTATTCAGGGGCAATCAGGCTTAGGAGTGACTaGAACAGCCGGACGAATGGCAGGCGGGACACCAGCACTAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: ANFSKYSGAIRLRSD*NSRTNGRRDTSTKD Trigger: GTCTTTAGTGCTGGTGTCCCGCCTGCCATTCGTCCGGCTGTTTCAGTCACTCCTAAGCCTGATTGCCCCTGAATACTTTGAGAAGTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR GCA 90 bp | TCTGAAGTACACATAGCCCAGATAGTGTGCTGGCTCCCTCTGCAATaGCAAGGGGGCCTTGTTGTTATACGACCGATCATCCACCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: SEVHIAQIVCWLPLQ*QGGLVVIRPIIHLP Trigger: TGGCAGGTGGATGATCGGTCGTATAACAACAAGGCCCCCTTGGCATTGCAGAGGGAGCCAGCACACTATCTGGGCTATGTGTACTTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR GCA 90 bp | AGAGCTGTCCTTCACCTGTCTGAAGTACACATAGCCCAGATAGTGTaGTGGCTCCCTCTGCAATGCCAAGGGGGCCTTGTTGTTATACGA | + |
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Preference number: 1 (lower is better) Translates to: RAVLHLSEVHIAQIV*WLPLQCQGGLVVIR Trigger: TCGTATAACAACAAGGCCCCCTTGGCATTGCAGAGGGAGCCAGCACACTATCTGGGCTATGTGTACTTCAGACAGGTGAAGGACAGCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR GCA 90 bp | TCCTTCATCCAAGCCTCAATGTTCGCCTCACAAATAGCTTCCAGGTaGAGAGCTTCCAGCTTCTGGGCCATCTCTTTGTGTCGTTGCCGA | + |
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Preference number: 1 (lower is better) Translates to: SFIQASMFASQIASR*RASSFWAISLCRCR Trigger: TCGGCAACGACACAAAGAGATGGCCCAGAAGCTGGAAGCTCTGCACCTGGAAGCTATTTGTGAGGCGAACATTGAGGCTTGGATGAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR TCA 90 bp | ACTTCTGGAAGTAACCCCTCTTCACAGAGCTGTCCTTCACCTGTCTaGAGTACACATAGCCCAGATAGTGTGCTGGCTCCCTCTGCAATG | + |
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Preference number: 1 (lower is better) Translates to: TSGSNPSSQSCPSPV*STHSPDSVLAPSAM Trigger: CATTGCAGAGGGAGCCAGCACACTATCTGGGCTATGTGTACTTCAGACAGGTGAAGGACAGCTCTGTGAAGAGGGGTTACTTCCAGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR GCA 90 bp | AGAAACTGGAACTTTGCTCATTCCTGTGTGTCAGCCTTGGGTTTGTaGCCTAAGCAGCACTGTTGTGTCTATAGCCTTCTACCTCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: RNWNFAHSCVSALGL*PKQHCCVYSLLPPH Trigger: GTGGGGAGGTAGAAGGCTATAGACACAACAGTGCTGCTTAGGGCACAAACCCAAGGCTGACACACAGGAATGAGCAAAGTTCCAGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CCA 90 bp | GAAGCACCTAAACAGATCCAGTTCATGGACACTAGTGAGGACAACTaGAGCTGGCAGCAGGTTCTCTTGATCACACTGCTTTGGAGGACT | + |
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Preference number: 1 (lower is better) Translates to: EAPKQIQFMDTSEDN*SWQQVLLITLLWRT Trigger: AGTCCTCCAAAGCAGTGTGATCAAGAGAACCTGCTGCCAGCTCCAGTTGTCCTCACTAGTGTCCATGAACTGGATCTGTTTAGGTGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR CCA 90 bp | GAGTGTTTTGATAAAGAAAGGGTTTGTGACTCCCAGGACCACGTTTaGTCTAGAGAGAGAGAGAGAGAGACAGACAGACAGAGAAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: ECFDKERVCDSQDHV*SRERERETDRQRRG Trigger: GCCTCTTCTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTAGACCAAACGTGGTCCTGGGAGTCACAAACCCTTTCTTTATCAAAACACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR TCA 90 bp | CTGTGTGAAAGTCAAGTGAAAACTAGCACGAGAAACACACTGCAGTaGTATTTGAGATGTGCATTTTACGGTGGAGCCATTAAGACGGAG | + |
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Preference number: 1 (lower is better) Translates to: LCESQVKTSTRNTLQ*YLRCAFYGGAIKTE Trigger: CTCCGTCTTAATGGCTCCACCGTAAAATGCACATCTCAAATATCACTGCAGTGTGTTTCTCGTGCTAGTTTTCACTTGACTTTCACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGGGTCCCGCATGCTCCAGGCTTCGCAGGAAATCGTCCTGGCGGAAGGGGCCACCTTCCAGGGTGTaGTGTTCTTCTGTAGCGGCA | + |
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Preference number: 2 (lower is better) Translates to: SWGPACSRLRRKSSWRKGPPSRV*CSSVAA Trigger: TGCCGCTACAGAAGAACATCACACCCTGGAAGGTGG...CCCCTTCCGCCAGGACGATTTCCTGCGAAGCCTGGAGCATGCGGGACCCCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTGAGCAGTCGTTTAAGCAGCGCTTTGTCCCGGTGGAGGTGGGCAGTATAGTCTCCCAGGCACCCTaGGTGCGAGTCTGGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: ALEQSFKQRFVPVEVGSIVSQAP*VRVWEG Trigger: GCCTTCCCAGACTCGCACTCAGGGTGCCTGGGAGAC...TATACTGCCCACCTCCACCGGGACAAAGCGCTGCTTAAACGACTGCTCAAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTCGACCACTTCCACCTCGGACTTGTCCTTCATCCAAGCCTCAATGTTCGCGGGTCTGCACGTGGGTaGGCACTGGCCGGAAGCACC | + |
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Preference number: 2 (lower is better) Translates to: QVDHFHLGLVLHPSLNVRGSARG*ALAGST Trigger: GGTGCTTCCGGCCAGTGCTCACCCACGTGCAGACCC...GCGAACATTGAGGCTTGGATGAAGGACAAGTCCGAGGTGGAAGTGGTCGACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGACCAGGTCGACCACTTCCACCTCGGACTTGTCCTTCATCCAAGCCTCAATGAGGCAGGCAGTGTGTaGGCAGGGTGCGAGGACGCG | + |
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Preference number: 2 (lower is better) Translates to: QDQVDHFHLGLVLHPSLNEAGSV*AGCEDA Trigger: CGCGTCCTCGCACCCTGCTCACACACTGCCTGCCTC...ATTGAGGCTTGGATGAAGGACAAGTCCGAGGTGGAAGTGGTCGACCTGGTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCGCTGCAGTGTCACCTCCTTCACGGGGAGTTGGTGGCCCTGTGCCCGTACCTTACATGTGGACACCTaGCTCAGGCCTTCCCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: ARCSVTSFTGSWWPCARTLHVDT*LRPSLL Trigger: AAGAAGGGAAGGCCTGAGGCAGGTGTCCACATGTAA...GGTACGGGCACAGGGCCACCAACTCCCCGTGAAGGAGGTGACACTGCAGCGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCATGAGTTCCCACAGGGTCTGCACGTGGGTGAGCACTGGCCGGAAGCACAAACAGCCGGACGAATaGCAGGCGGGACACCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RSMSSHRVCTWVSTGRKHKQPDE*QAGHQH Trigger: GTGCTGGTGTCCCGCCTGCCATTCGTCCGGCTGTTT...GTGCTTCCGGCCAGTGCTCACCCACGTGCAGACCCTGTGGGAACTCATGCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | GATGCAGGTGAGCTGGGGTCCCGCATGCTCCAGGCTTCGCAGGAAATCGTCCTGCCAGCTTGTCCACCCTaGATGGGATGCGCACCTGAA | + |
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Preference number: 2 (lower is better) Translates to: DAGELGSRMLQASQEIVLPACPP*MGCAPE Trigger: TTCAGGTGCGCATCCCATCCAGGGTGGACAAGCTGG...CAGGACGATTTCCTGCGAAGCCTGGAGCATGCGGGACCCCAGCTCACCTGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAGTGTCACCTCCTTCACGGGGAGTTGGTGGCCCTGTGCCCGTACCAGCTACTCTGCACATCCCATaGCCGCTTCTTCTGTACGCC | + |
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Preference number: 2 (lower is better) Translates to: AAVSPPSRGVGGPVPVPATLHIP*PLLLYA Trigger: GGCGTACAGAAGAAGCGGCCATGGGATGTGCAGAGT...AGCTGGTACGGGCACAGGGCCACCAACTCCCCGTGAAGGAGGTGACACTGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGACTCCACCTTCCAGGGTGTGATGTTCTTCTGTAGCGGCATGAGGCTGGCCGGACAAGGGTGGTTCTaGGAGGGGGCTGAAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LDSTFQGVMFFCSGMRLAGQGWF*EGAEAE Trigger: CTCAGCTTCAGCCCCCTCCCAGAACCACCCTTGTCC...GGCCAGCCTCATGCCGCTACAGAAGAACATCACACCCTGGAAGGTGGAGTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAACTGGCCACACGTCCTCACTTCAGTCTaGACCACCCCAAGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TLLDPLNAGSLRSPNWPHVLTSV*TTPRAR Trigger: CCTGGCCCTTGGGGTGGTCCAGACTGAAGTGAGGAC...GTGTGGCCAGTTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR CCA 90 bp | GATGCAGGTGAGCTGGGGTCCCGCATGCTCCAGGCTTCGCAGGAAATCGTCCTGACAGCAGGACCTGTCTaGTGGTGGCTGCTCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: DAGELGSRMLQASQEIVLTAGPV*WWLLRT Trigger: AGTTCTGAGCAGCCACCACCAGACAGGTCCTGCTGT...CAGGACGATTTCCTGCGAAGCCTGGAGCATGCGGGACCCCAGCTCACCTGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | GCGCTTTGTCCCGGTGGAGGTGGGCAGTATAGGAGGTGTAGAGGCCTGGCTTGGCTTGTCCACCCTGGATaGGATGCGCACCTGAATGAC | + |
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Preference number: 2 (lower is better) Translates to: ALCPGGGGQYRRCRGLAWLVHPG*DAHLND Trigger: GTCATTCAGGTGCGCATCCCATCCAGGGTGGACAAG...CCAAGCCAGGCCTCTACACCTCCTATACTGCCCACCTCCACCGGGACAAAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCAATCAGGCTTAGGAGTGACTGAAACAGCCGGACGAATGGCAGGCGGGACACCCAGCTTGGAGGCCTaGCTTTCAAGGGAGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: GQSGLGVTETAGRMAGGTPSLEA*LSRERE Trigger: TTCCCTCTCCCTTGAAAGGCAGGCCTCCAAGCTGGG...TGTCCCGCCTGCCATTCGTCCGGCTGTTTCAGTCACTCCTAAGCCTGATTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCCAGGCAGGGTGCCAACTTCTCAAAGTATTCAGGGGCAATCAGGCTTAGGCCCAGGCACCCTGAGTaGGAGTCTGGGAAGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ASRQGANFSKYSGAIRLRPRHPE*ESGKAR Trigger: CCTGGCCTTCCCAGACTCGCACTCAGGGTGCCTGGG...CCTAAGCCTGATTGCCCCTGAATACTTTGAGAAGTTGGCACCCTGCCTGGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR GCA 90 bp | AGCACCAGCTCTGAAGACACGTCGGGTGAGGGTGCCAGCACCACGAGGGGCTCCTGCTTCCAGGCAGGGTaGCAACTTCTCAAAGTATTC | + |
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Preference number: 2 (lower is better) Translates to: STSSEDTSGEGASTTRGSCFQAG*QLLKVF Trigger: GAATACTTTGAGAAGTTGGCACCCTGCCTGGAAGCA...GGAGCCCCTCGTGGTGCTGGCACCCTCACCCGACGTGTCTTCAGAGCTGGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCTCCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGGAAAGGGGCTGGCCCTaGCAGCTGCCTCCCTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RSSTNSADPILGERESERERGWP*QLPPSS Trigger: AGAAGAGGGAGGCAGCTGCCAGGGCCAGCCCCTTTC...CCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGGAGCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR CCA 90 bp | CCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGATGTAGCGTAAAGGAAAGGGGCTaGCCCTGGCAGCTGCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: PLTQLIPSWERESRRGCSVKERG*PWQLPP Trigger: GGGAGGCAGCTGCCAGGGCCAGCCCCTTTCCTTTAC...GCTACATCCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR TCA 90 bp | CCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGATGTAGCGGGGGAGGGGAGGTCTaGAGACAAGCTAGAGCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: PLTQLIPSWERESRRGCSGGGEV*RQARAL Trigger: CAAGGCTCTAGCTTGTCTTCAGACCTCCCCTCCCCC...GCTACATCCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR GCA 90 bp | ACCAGCTTCTCCCGAAGTTTCAGGACCAGGTCGACCACTTCCACCTCGGACTTGGACCGATCATCCACCTaGCAGAGGCTCCTTTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: TSFSRSFRTRSTTSTSDLDRSST*QRLLCP Trigger: GGGACAAAGGAGCCTCTGGCAGGTGGATGATCGGTC...CAAGTCCGAGGTGGAAGTGGTCGACCTGGTCCTGAAACTTCGGGAGAAGCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCAATCAGGCTTAGGAGTGACTGAAACAGCCGGACGAATGGCAGGCGGGACATGGCTCCCTCTGCAATaGCAAGGGGGCCTTGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: GQSGLGVTETAGRMAGGTWLPLQ*QGGLVV Trigger: AACAACAAGGCCCCCTTGGCATTGCAGAGGGAGCCA...TGTCCCGCCTGCCATTCGTCCGGCTGTTTCAGTCACTCCTAAGCCTGATTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR GCA 90 bp | AGTAGGGGCGGAAGTCACAGCAGAACTTCAGGGGCTGGAGGCAGCTGGTTAGGGATAGCCCAGATAGTGTaGTGGCTCCCTCTGCAATGC | + |
|
Preference number: 2 (lower is better) Translates to: SRGGSHSRTSGAGGSWLGIAQIV*WLPLQC Trigger: GCATTGCAGAGGGAGCCAGCACACTATCTGGGCTAT...CCCTAACCAGCTGCCTCCAGCCCCTGAAGTTCTGCTGTGACTTCCGCCCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGACCAGGTCGACCACTTCCACCTCGGACTTGTCCTTCATCCAAGCCTCAATAGTTCCCACAGGGTCTaGACGTGGGTGAGCACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: QDQVDHFHLGLVLHPSLNSSHRV*TWVSTG Trigger: GCCAGTGCTCACCCACGTGCAGACCCTGTGGGAACT...ATTGAGGCTTGGATGAAGGACAAGTCCGAGGTGGAAGTGGTCGACCTGGTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCAGGCAGGCGGTATACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAATGGAGTGTGGGCAGATaGAGCCAGGAGGCAGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: PAGRRYTLPVTRTSPSKKWSVGR*SQEAAG Trigger: ACCTGCTGCCTCCTGGCTCCATCTGCCCACACTCCA...TTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGTATACCGCCTGCCTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCCACCCAACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAACACAGGGGGAAAAGCTaGAGTAGCCCTTGGCAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: PPPNPLRSPECWLTALSQHRGKS*SSPWQH Trigger: ATGCTGCCAAGGGCTACTCCAGCTTTTCCCCCTGTG...TTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGTTGGGTGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCCACGCTCTCTGTTACATGTGGACACCTGCCTCAGGCCTTCCCTTCTTGGGTCCCCTGACATCTTaGGCTCCCCAATTCGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LSHALCYMWTPASGLPFLGPLTS*APQFGG Trigger: TCCTCCGAATTGGGGAGCCCAAGATGTCAGGGGACC...CAAGAAGGGAAGGCCTGAGGCAGGTGTCCACATGTAACAGAGAGCGTGGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR CAA 90 bp | ATAAGGACTGTGGCGAGGACCTCCAAGAACAGCCTGAGCTTGCTTTaGCAAGTGGGGTGCCAGGCCCCCACACCATCCCTCATTCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: IRTVARTSKNSLSLL*QVGCQAPTPSLILS Trigger: TGAGAGAATGAGGGATGGTGTGGGGGCCTGGCACCCCACTTGCAAAAGCAAGCTCAGGCTGTTCTTGGAGGTCCTCGCCACAGTCCTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CAA 90 bp | ATTTCGCTGCCTGGTGGGGGACGCCTGACAGGCACAGAGTCAACTTaGTGCCCTCGTGGCTCTGTATCTCAGCCACGCTCTCTGTTACAT | + |
|
Preference number: 2 (lower is better) Translates to: ISLPGGGRLTGTEST*CPRGSVSQPRSLLH Trigger: ATGTAACAGAGAGCGTGGCTGAGATACAGAGCCACGAGGGCACAAAGTTGACTCTGTGCCTGTCAGGCGTCCCCCACCAGGCAGCGAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR GCA 90 bp | CCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGATGTAGCCCCAGCTTGGAGGCCTaGCTTTCAAGGGAGAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PLTQLIPSWERESRRGCSPSLEA*LSRERE Trigger: TTCCCTCTCCCTTGAAAGGCAGGCCTCCAAGCTGGG...GCTACATCCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGGGTCCCGCATGCTCCAGGCTTCGCAGGAAATCGTCCTGGCGGAAGGGGCAAATGTCATTTTACTaGTGGGACAAGGGTGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SWGPACSRLRRKSSWRKGQMSFY*WDKGGS Trigger: AGAACCACCCTTGTCCCAGCAGTAAAATGACATTTG...CCCCTTCCGCCAGGACGATTTCCTGCGAAGCCTGGAGCATGCGGGACCCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | GATGTACGGCCCATCCTCTCAGAATGCCCCTTTTCCCTGATACTGCCTGACACTGGACAAGGGTGGTTCTaGGAGGGGGCTGAAGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: DVRPILSECPFSLILPDTGQGWF*EGAEAE Trigger: CTCAGCTTCAGCCCCCTCCCAGAACCACCCTTGTCC...AGTGTCAGGCAGTATCAGGGAAAAGGGGCATTCTGAGAGGATGGGCCGTACATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR CCA 90 bp | GATGTACGGCCCATCCTCTCAGAATGCCCCTTTTCCCTGATACTGCCTGACACTCTGCTGGGACAAGGGTaGTTCTGGGAGGGGGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: DVRPILSECPFSLILPDTLLGQG*FWEGAE Trigger: TTCAGCCCCCTCCCAGAACCACCCTTGTCCCAGCAG...AGTGTCAGGCAGTATCAGGGAAAAGGGGCATTCTGAGAGGATGGGCCGTACATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCAGGCAGGGTGCCAACTTCTCAAAGTATTCAGGGGCAATCAGGCTTAGGCTGCTGGGACAAGGGTaGTTCTGGGAGGGGGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: ASRQGANFSKYSGAIRLRLLGQG*FWEGAE Trigger: TTCAGCCCCCTCCCAGAACCACCCTTGTCCCAGCAG...CCTAAGCCTGATTGCCCCTGAATACTTTGAGAAGTTGGCACCCTGCCTGGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | GATGTACGGCCCATCCTCTCAGAATGCCCCTTTTCCCTGATACTGCCTGACACTGCTTGCTTTTGCAAGTaGGGTGCCAGGCCCCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: DVRPILSECPFSLILPDTACFCK*GARPPH Trigger: GTGTGGGGGCCTGGCACCCCACTTGCAAAAGCAAGC...AGTGTCAGGCAGTATCAGGGAAAAGGGGCATTCTGAGAGGATGGGCCGTACATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCTCCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGTACTCAGCTGAGGGTTaGCTGCTGCTCCAGGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: RSSTNSADPILGERESERYSAEG*LLLQVL Trigger: GAGGACCTGGAGCAGCAGCCAACCCTCAGCTGAGTA...CCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGGAGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCCACCCAACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAATGCCCTTGGCATGGATaGAAAGAGATGGGCTTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PPPNPLRSPECWLTALSQCPWHG*KEMGLS Trigger: GCTCAAGCCCATCTCTTTCCATCCATGCCAAGGGCA...TTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGTTGGGTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAACTGGAACTTTGCTCATTCTGCCTCCCTCTTCTCTaGGCGGGGAAGCCTGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TLPVTRTSPSKKLELCSFCLPLL*AGKPAG Trigger: CCCAGCAGGCTTCCCCGCTCAGAGAAGAGGGAGGCA...GAATGAGCAAAGTTCCAGTTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCCACCCAACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAAGGAAAGAGATGGGCTTaGGCCTACTTTGGACAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PPPNPLRSPECWLTALSQGKRWA*AYFGQK Trigger: CTTCTGTCCAAAGTAGGCTCAAGCCCATCTCTTTCC...TTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGTTGGGTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR TCA 90 bp | GCCACGCTCTCTGTTACATGTGGACACCTGCCTCAGGCCTTCCCTTCTTGGTATCCAATTCGGAGGACATaGGGCCAGTGCTGGAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: ATLSVTCGHLPQAFPSWYPIRRT*GQCWSV Trigger: AACACTCCAGCACTGGCCTCATGTCCTCCGAATTGG...ATACCAAGAAGGGAAGGCCTGAGGCAGGTGTCCACATGTAACAGAGAGCGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR GCA 90 bp | GATGCAGGTGAGCTGGGGTCCCGCATGCTCCAGGCTTCGCAGGAAATCGTCCTGGCAAAGGTTAACTCCTaGAGGGCAATGAGGCTATAT | + |
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Preference number: 2 (lower is better) Translates to: DAGELGSRMLQASQEIVLAKVNS*RAMRLY Trigger: ATATAGCCTCATTGCCCTGCAGGAGTTAACCTTTGC...CAGGACGATTTCCTGCGAAGCCTGGAGCATGCGGGACCCCAGCTCACCTGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | GCGCTTTGTCCCGGTGGAGGTGGGCAGTATAGGAGGTGTAGAGGCCTGGCTTGGTTGATCACACTGCTTTaGAGGACTGGATTCCAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: ALCPGGGGQYRRCRGLAWLITLL*RTGFQL Trigger: AAGCTGGAATCCAGTCCTCCAAAGCAGTGTGATCAA...CCAAGCCAGGCCTCTACACCTCCTATACTGCCCACCTCCACCGGGACAAAGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTCGACCACTTCCACCTCGGACTTGTCCTTCATCCAAGCCTCAATGTTCGCCGGAGGTGTAGAGGCCTaGCTTGGTGTCAAGGGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: RSTTSTSDLSFIQASMFAGGVEA*LGVKGL Trigger: AAGACCCTTGACACCAAGCCAGGCCTCTACACCTCC...GGCGAACATTGAGGCTTGGATGAAGGACAAGTCCGAGGTGGAAGTGGTCGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR CAA 90 bp | ACCTCTTTGGAGCCATCTGTCTCGACATCCCTCCAGGCTCTGCCCTaGGCATGGATGGAAAGAGATGGGCTTGAGCCTACTTTGGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: TSLEPSVSTSLQALP*AWMERDGLEPTLDR Trigger: TCTGTCCAAAGTAGGCTCAAGCCCATCTCTTTCCATCCATGCCAAGGGCAGAGCCTGGAGGGATGTCGAGACAGATGGCTCCAAAGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CAA 90 bp | GGCCTTGTTGTTATACGACCGATCATCCACCTGCCAGAGGCTCCTTaGTCCCCCACACTGACGCATACGGAAACTGAACTGAGTGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: GLVVIRPIIHLPEAP*SPTLTHTETELSVS Trigger: GGAGACACTCAGTTCAGTTTCCGTATGCGTCAGTGTGGGGGACAAAGGAGCCTCTGGCAGGTGGATGATCGGTCGTATAACAACAAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCAGGCAGGCGGTATACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAATTTCTGATACTCAGCTaGGGGTTGGCTGCTGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: PAGRRYTLPVTRTSPSKKFLILS*GLAAAP Trigger: TGGAGCAGCAGCCAACCCTCAGCTGAGTATCAGAAA...TTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGTATACCGCCTGCCTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR TCA 90 bp | GCTTCCAGGCAGGGTGCCAACTTCTCAAAGTATTCAGGGGCAATCAGGCTTAGGGACGCATACGGAAACTaGACTGAGTGTCTCCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ASRQGANFSKYSGAIRLRDAYGN*TECLPG Trigger: GCCTGGGAGACACTCAGTTCAGTTTCCGTATGCGTC...CCTAAGCCTGATTGCCCCTGAATACTTTGAGAAGTTGGCACCCTGCCTGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTCGACCACTTCCACCTCGGACTTGTCCTTCATCCAAGCCTCAATGTTCGCCTTGAAAAACCGCCTGTaGTGGCAAGAGGCAGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RSTTSTSDLSFIQASMFALKNRL*WQEAAE Trigger: CTCAGCTGCCTCTTGCCATCACAGGCGGTTTTTCAA...GGCGAACATTGAGGCTTGGATGAAGGACAAGTCCGAGGTGGAAGTGGTCGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGCTCCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGGAAGAAGTGAGGCAGTaGCAGCACAGAATCCCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: RSSTNSADPILGERESEREEVRQ*QHRIPQ Trigger: TTGGGGGATTCTGTGCTGGCACTGCCTCACTTCTTC...CCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGGAGCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAACTGGCCACACAATCCCTCATTCTCTCATaGTGGCCAATCACAGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PLRSPECWLTALSQLATQSLILS*WPITAG Trigger: TCCTGCTGTGATTGGCCAGCATGAGAGAATGAGGGA...TTGTGTGGCCAGTTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR GCA 90 bp | ATTCAGGGACCAGGCTGTGTTCCACGTCCCATTCTTACTGCTAGGACAAAAGTGGCCTCTCAAGCAAGCTaGAGGAGGAGGGGCAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: IQGPGCVPRPILTARTKVASQAS*RRRGRH Trigger: GTGTCTGCCCCTCCTCCTGCAGCTTGCTTGAGAGGC...CACTTTTGTCCTAGCAGTAAGAATGGGACGTGGAACACAGCCTGGTCCCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAGGAAGCTGGAGGGTAAAAGAGTCCTCCTGTCCTTCCGGTCTGTCCCTGTCAGCCTTGGGTTTGTaGCCTAAGCAGCACTGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: KAGSWRVKESSCPSGLSLSALGL*PKQHCC Trigger: ACAACAGTGCTGCTTAGGGCACAAACCCAAGGCTGA...CAGGGACAGACCGGAAGGACAGGAGGACTCTTTTACCCTCCAGCTTCCTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR GCA 90 bp | CACCTCGGACTTGTCCTTCATCCAAGCCTCAATGTTCGCCTCACAAATAGCTTCCTCAGCAGGGCACTCTaGACATCCCATGGCCGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HLGLVLHPSLNVRLTNSFLSRAL*TSHGRF Trigger: GAAGCGGCCATGGGATGTGCAGAGTGCCCTGCTGAG...GAAGCTATTTGTGAGGCGAACATTGAGGCTTGGATGAAGGACAAGTCCGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGGGACCAGGCTGTGTTCCACGTCCCATTCTTACTGCTAGGACAAAAGTGAGGCATCCTGGAGTGTaGGCAGATGGAGCCAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: IQGPGCVPRPILTARTKVRHPGV*ADGARR Trigger: CCTCCTGGCTCCATCTGCCCACACTCCAGGATGCCT...CACTTTTGTCCTAGCAGTAAGAATGGGACGTGGAACACAGCCTGGTCCCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR CCA 90 bp | AGGTCGACCACTTCCACCTCGGACTTGTCCTTCATCCAAGCCTCAATGTTCGCCAACTTTGTGCCCTCGTaGCTCTGTATCTCAGCCACG | + |
|
Preference number: 2 (lower is better) Translates to: RSTTSTSDLSFIQASMFANFVPS*LCISAT Trigger: CGTGGCTGAGATACAGAGCCACGAGGGCACAAAGTT...GGCGAACATTGAGGCTTGGATGAAGGACAAGTCCGAGGTGGAAGTGGTCGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTCGACCACTTCCACCTCGGACTTGTCCTTCATCCAAGCCTCAATGTTCGCTTTTCTCCTTGTCTGTaGGCCGGAAGTCACTTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: QVDHFHLGLVLHPSLNVRFSPCL*AGSHLG Trigger: ACCCAAGTGACTTCCGGCTCACAGACAAGGAGAAAA...GCGAACATTGAGGCTTGGATGAAGGACAAGTCCGAGGTGGAAGTGGTCGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCTCCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGCTCATTCTCTCATGCTaGCCAATCACAGCAGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RSSTNSADPILGERESERLILSC*PITAGR Trigger: CCTTCCTGCTGTGATTGGCCAGCATGAGAGAATGAG...CCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGGAGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CAA 90 bp | TTCTCCCGAAGTTTCAGGACCAGGTCGACCACTTCCACCTCGGACTaGTCCTTCATCCAAGCCTCAATGTTCGCCTCACAAATAGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: FSRSFRTRSTTSTSD*SFIQASMFASQIAS Trigger: GGAAGCTATTTGTGAGGCGAACATTGAGGCTTGGATGAAGGACAAGTCCGAGGTGGAAGTGGTCGACCTGGTCCTGAAACTTCGGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR GCA 90 bp | ATTACAAACTGCTTCCAGGCAGGGTGCCAACTTCTCAAAGTATTCAGGGGCAATTGTGCTGGCTCCCTCTaGAATGCCAAGGGGGCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: ITNCFQAGCQLLKVFRGNCAGSL*NAKGAL Trigger: CAAGGCCCCCTTGGCATTGCAGAGGGAGCCAGCACA...ATTGCCCCTGAATACTTTGAGAAGTTGGCACCCTGCCTGGAAGCAGTTTGTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR CAA 90 bp | TACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAACTGGAACTTaGCTCATTCCTGTGTGTCAGCCTTGGGTTTGTGCCCTAAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: YSTSNQDKPLEETGT*LIPVCQPWVCALSS Trigger: GCTGCTTAGGGCACAAACCCAAGGCTGACACACAGGAATGAGCAAAGTTCCAGTTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAACTGGAACTTTGCTCATTCCCTTGGCAGCATGGGTaGAATGCATGGAGCAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: TLPVTRTSPSKKLELCSFPWQHG*NAWSRC Trigger: ACACCTGCTCCATGCATTTCACCCATGCTGCCAAGG...GAATGAGCAAAGTTCCAGTTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAACTGGCCACACAAGAGGCAGTACATACTTaGGGTTTGATTAAAGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: PLRSPECWLTALSQLATQEAVHT*GLIKES Trigger: GGACTCTTTAATCAAACCTCAAGTATGTACTGCCTC...TTGTGTGGCCAGTTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGTCGACCACTTCCACCTCGGACTTGTCCTTCATCCAAGCCTCAATGTTCGCTGCTTTTATGAACCATaGGCTGAGCATAGACACAGC | + |
|
Preference number: 2 (lower is better) Translates to: QVDHFHLGLVLHPSLNVRCFYEP*AEHRHS Trigger: GCTGTGTCTATGCTCAGCTCATGGTTCATAAAAGCA...GCGAACATTGAGGCTTGGATGAAGGACAAGTCCGAGGTGGAAGTGGTCGACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR-3UTR TCA 90 bp | CACCTCGGACTTGTCCTTCATCCAAGCCTCAATGTTCGCCTCACAAATAGCTTCATACGGAAACTGAACTaGGTGTCTCCCAGGCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: HLGLVLHPSLNVRLTNSFIRKLN*VSPRHP Trigger: AGGGTGCCTGGGAGACACTCAGTTCAGTTTCCGTAT...GAAGCTATTTGTGAGGCGAACATTGAGGCTTGGATGAAGGACAAGTCCGAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAGCTAAAGATCTTCACCCCACCCTGCTTGGGACAGATCCCTGGACATCTCTTGGCAGCAGGTTCTCTTaGTCACACTGCTTTGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: IAKDLHPTLLGTDPWTSLGSRFS*SHCFGG Trigger: TCCTCCAAAGCAGTGTGATCAAGAGAACCTGCTGCC...AAGAGATGTCCAGGGATCTGTCCCAAGCAGGGTGGGGTGAAGATCTTTAGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCACCCAACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAAGTGATATTTGAGATGTaGATTTTACGGTGGAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: PPPNPLRSPECWLTALSQVIFEM*ILRWSH Trigger: ATGGCTCCACCGTAAAATGCACATCTCAAATATCAC...TTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGTTGGGTGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAACTGGCCACACAAAAGAAACTGGAACTTTaGTCATTCCTGTGTGTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: PLRSPECWLTALSQLATQKKLEL*SFLCVS Trigger: GCTGACACACAGGAATGAGCAAAGTTCCAGTTTCTT...TTGTGTGGCCAGTTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR-3UTR CCA 90 bp | CAATTGTACCCTAAGGCCAAGACAGCAGAGAATATAGCATCAGGCTACAGCCCACAACACAAGGCATCCTaGAGTGTGGGCAGATGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: QLYPKAKTAENIASGYSPQHKAS*SVGRWS Trigger: GCTCCATCTGCCCACACTCCAGGATGCCTTGTGTTG...TGGGCTGTAGCCTGATGCTATATTCTCTGCTGTCTTGGCCTTAGGGTACAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGCATGAGTTCCCACAGGGTCTGCACGTGGGTGAGCACTGGCCGGAAGCACTGCTCAGAACTTGATTaGTTGATGAATGAATGCATC | + |
|
Preference number: 2 (lower is better) Translates to: RSMSSHRVCTWVSTGRKHCSELD*LMNECI Trigger: GATGCATTCATTCATCAACCAATCAAGTTCTGAGCA...GTGCTTCCGGCCAGTGCTCACCCACGTGCAGACCCTGTGGGAACTCATGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGCTAAAGATCTTCACCCCACCCTGCTTGGGACAGATCCCTGGACATCTCTTACTAGTGAGGACAACTaGAGCTGGCAGCAGGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: IAKDLHPTLLGTDPWTSLTSEDN*SWQQVL Trigger: GAGAACCTGCTGCCAGCTCCAGTTGTCCTCACTAGT...AAGAGATGTCCAGGGATCTGTCCCAAGCAGGGTGGGGTGAAGATCTTTAGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CAA 90 bp | CGAAGAAACTGGAACTTTGCTCATTCCTGTGTGTCAGCCTTGGGTTaGTGCCCTAAGCAGCACTGTTGTGTCTATAGCCTTCTACCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: RRNWNFAHSCVSALG*CPKQHCCVYSLLPP Trigger: GGGAGGTAGAAGGCTATAGACACAACAGTGCTGCTTAGGGCACAAACCCAAGGCTGACACACAGGAATGAGCAAAGTTCCAGTTTCTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR-3UTR GCA 90 bp | CAATTGTACCCTAAGGCCAAGACAGCAGAGAATATAGCATCAGGCTACAGCCCAGCAGCATGGGTGAAATaGATGGAGCAGGTGTTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: QLYPKAKTAENIASGYSPAAWVK*MEQVFR Trigger: CCTGAACACCTGCTCCATGCATTTCACCCATGCTGC...TGGGCTGTAGCCTGATGCTATATTCTCTGCTGTCTTGGCCTTAGGGTACAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAAGCTCCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGTGTGTGAAAGTCAAGTaGAAACTAGCACGAGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: RSSTNSADPILGERESERCVKVK*KLARET Trigger: TGTTTCTCGTGCTAGTTTTCACTTGACTTTCACACA...CCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGGAGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR-3UTR TCA 90 bp | CACCTCGGACTTGTCCTTCATCCAAGCCTCAATGTTCGCCTCACAAATAGCTTCTGTCCTTCACCTGTCTaGAGTACACATAGCCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: HLGLVLHPSLNVRLTNSFCPSPV*STHSPD Trigger: ATCTGGGCTATGTGTACTTCAGACAGGTGAAGGACA...GAAGCTATTTGTGAGGCGAACATTGAGGCTTGGATGAAGGACAAGTCCGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAGGACAAAGAGCTTCTGCCCTCTCAAGTAGCTGCCTAGGCAAAGTACCCCTTCAAATGTCATTTTACTaGTGGGACAAGGGTGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SGQRASALSSSCLGKVPLQMSFY*WDKGGS Trigger: AGAACCACCCTTGTCCCAGCAGTAAAATGACATTTG...AAGGGGTACTTTGCCTAGGCAGCTACTTGAGAGGGCAGAAGCTCTTTGTCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAACTGGAACTTTGCTCATTCTCCAAGAGATACCTCTaGCTACGGGTTCAATTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: TLPVTRTSPSKKLELCSFSKRYL*LRVQLY Trigger: GTACAATTGAACCCGTAGGCAGAGGTATCTCTTGGA...GAATGAGCAAAGTTCCAGTTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR-3UTR GCA 90 bp | CGGAAGCACCTAAACAGATCCAGTTCATGGACACTAGTGAGGACAACTGGAGCTTGGTTGATGAATGAATaGATCAATGGGCCACTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RKHLNRSSSWTLVRTTGAWLMNE*INGPLF Trigger: AAAAAGTGGCCCATTGATGCATTCATTCATCAACCA...AGCTCCAGTTGTCCTCACTAGTGTCCATGAACTGGATCTGTTTAGGTGCTTCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAACTGGAACTTTGCTCATTCAGAAACACACTGCAGTaGTATTTGAGATGTGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: TLPVTRTSPSKKLELCSFRNTLQ*YLRCAF Trigger: AAATGCACATCTCAAATATCACTGCAGTGTGTTTCT...GAATGAGCAAAGTTCCAGTTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR CCA 72 bp | GCCCGCTGCAGTGTCACCTCCTTCACGGGGAGTTGGTaGCCCTGTGCCCGTACCAGCTTCTCCCGAAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ARCSVTSFTGSW*PCARTSFSRSF Trigger: GAAACTTCGGGAGAAGCTGGTACGGGCACAGGGCCACCAACTCCCCGTGAAGGAGGTGACACTGCAGCGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCCGCTGCAGTGTCACCTCCTTCACGGGGAGTTGGTGGCCCTGTGCCCGTACCATGCTGCTTTTCTCCTaGTCTGTGAGCCGGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ARCSVTSFTGSWWPCARTMLLFS*SVSRKS Trigger: TGACTTCCGGCTCACAGACAAGGAGAAAAGCAGCAT...GGTACGGGCACAGGGCCACCAACTCCCCGTGAAGGAGGTGACACTGCAGCGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR TCA 72 bp | TGTCCTTCCGGTCTGTCCCTGGGGCTGGCTGCCTCATaGCCTCCACCCAACCCTCTTAGATCCCCTGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: CPSGLSLGLAAS*PPPNPLRSPEC Trigger: GCATTCAGGGGATCTAAGAGGGTTGGGTGGAGGTCATGAGGCAGCCAGCCCCAGGGACAGACCGGAAGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR GCA 72 bp | AGGGGCTCCCCAAGAAGCATGAGTTCCCACAGGGTCTaGACGTGGGTGAGCACTGGCCGGAAGCACCTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RGSPRSMSSHRV*TWVSTGRKHLN Trigger: GTTTAGGTGCTTCCGGCCAGTGCTCACCCACGTGCAGACCCTGTGGGAACTCATGCTTCTTGGGGAGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR GCA 72 bp | GTGAGCTCTAGAAGGTGCCGCCTCAGCAGGGCACTCTaGACATCCCATGGCCGCTTCTTCTGTACGCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VSSRRCRLSRAL*TSHGRFFCTPL Trigger: CAAGGGCGTACAGAAGAAGCGGCCATGGGATGTGCAGAGTGCCCTGCTGAGGCGGCACCTTCTAGAGCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CCA 72 bp | CCCTCTGTCCATCCCTTCATCCCTCTGCAGAACGAGTaGGGTGTAAAGGAAAGGGGCTGGCCCTGGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSVHPFIPLQNE*GVKERGWPWQL Trigger: CAGCTGCCAGGGCCAGCCCCTTTCCTTTACACCCCACTCGTTCTGCAGAGGGATGAAGGGATGGACAGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR TCA 72 bp | GGACTTGAAAAACCGCCTGTGATGGCAAGAGGCAGCTaGGGAGCTGAGCTAGCGGACTTGGGGGCACCCACA | + |
|
Preference number: 3 (lower is better) Translates to: GLEKPPVMARGS*GAELADLGAPT Trigger: TGTGGGTGCCCCCAAGTCCGCTAGCTCAGCTCCTCAGCTGCCTCTTGCCATCACAGGCGGTTTTTCAAGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR GCA 72 bp | CCACAGCCGGGGAGCTCCAGCTGTCACAGAGGATGGTaGCATGGTTCTGAAGATCCCTTAGAGACCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PQPGSSSCHRGW*HGSEDPLETRL Trigger: GAGCCTGGTCTCTAAGGGATCTTCAGAACCATGGCACCATCCTCTGTGACAGCTGGAGCTCCCCGGCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR CCA 72 bp | TCCCCACAGCCGGGGAGCTCCAGCTGTCACAGAGGATaGTGCCATGGTTCTGAAGATCCCTTAGAGACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPQPGSSSCHRG*CHGSEDPLETR Trigger: CCTGGTCTCTAAGGGATCTTCAGAACCATGGCACCATCCTCTGTGACAGCTGGAGCTCCCCGGCTGTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR CCA 72 bp | AAGAGTCCTCCTGTCCTTCCGGTCTGTCCCTGGGGCTaGCTGCCTCATGACCTCCACCCAACCCTCTTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KSPPVLPVCPWG*LPHDLHPTLLD Trigger: ATCTAAGAGGGTTGGGTGGAGGTCATGAGGCAGCCAGCCCCAGGGACAGACCGGAAGGACAGGAGGACTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR CCA 72 bp | GGAAGTCACAGCAGAACTTCAGGGGCTGGAGGCAGCTaGTTAGGGCTAGCACCAGCTCTGAAGACACGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: GSHSRTSGAGGS*LGLAPALKTRR Trigger: CCGACGTGTCTTCAGAGCTGGTGCTAGCCCTAACCAGCTGCCTCCAGCCCCTGAAGTTCTGCTGTGACTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGACCAGGTCGACCACTTCCACCTCGGACTTGTCCTTCATCCAAGCCTCAATCGTTTAAGCAGCGCTTaGTCCCGGTGGAGGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QDQVDHFHLGLVLHPSLNRLSSA*SRWRWA Trigger: TGCCCACCTCCACCGGGACAAAGCGCTGCTTAAACG...ATTGAGGCTTGGATGAAGGACAAGTCCGAGGTGGAAGTGGTCGACCTGGTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CCA 72 bp | AGGTTCAGGGTCTGCCCAGGCACCGGCGCTGGCCATTaGTCAATCTCATTACAAACTGCTTCCAGGCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RFRVCPGTGAGH*SISLQTASRQG Trigger: ACCCTGCCTGGAAGCAGTTTGTAATGAGATTGACCAATGGCCAGCGCCGGTGCCTGGGCAGACCCTGAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CCA 72 bp | TCCCCAAGAAGCATGAGTTCCCACAGGGTCTGCACGTaGGTGAGCACTGGCCGGAAGCACCTAAACAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: SPRSMSSHRVCT*VSTGRKHLNRS Trigger: GGATCTGTTTAGGTGCTTCCGGCCAGTGCTCACCCACGTGCAGACCCTGTGGGAACTCATGCTTCTTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCCACCCAACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAAGGGCTTGAGCCTACTTaGGACAGAAGCTCCACTAAC | + |
|
Preference number: 3 (lower is better) Translates to: PPPNPLRSPECWLTALSQGLEPT*DRSSTN Trigger: GTTAGTGGAGCTTCTGTCCAAAGTAGGCTCAAGCCC...TTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGTTGGGTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAACTGGCCACACAACTCCAGGCTCTGCCCTaGGCATGGATGGAAAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PLRSPECWLTALSQLATQLQALP*AWMERD Trigger: ATCTCTTTCCATCCATGCCAAGGGCAGAGCCTGGAG...TTGTGTGGCCAGTTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR TCA 72 bp | AGACAAAGGTCACATGAGCTGGGTGCTACTGAGCCATaGGCACAGGTCCTCCTTTTCAGCGGGATGGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: RQRSHELGATEP*AQVLLFSGMGP Trigger: GGGTCCCATCCCGCTGAAAAGGAGGACCTGTGCTCATGGCTCAGTAGCACCCAGCTCATGTGACCTTTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR GCA 72 bp | CACCTACAGGTTTCTGATACTCAGCTGAGGGTTGGCTaGTGCTCCAGGTCCTCACTTCAGTCTGGACCACCC | + |
|
Preference number: 3 (lower is better) Translates to: HLQVSDTQLRVG*CSRSSLQSGPP Trigger: GGGTGGTCCAGACTGAAGTGAGGACCTGGAGCAGCAGCCAACCCTCAGCTGAGTATCAGAAACCTGTAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR GCA 72 bp | CTTTGGAGCCATCTGTCTCGACATCCCTCCAGGCTCTaGCCTTGGCATGGATGGAAAGAGATGGGCTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LWSHLSRHPSRL*PWHGWKEMGLS Trigger: GCTCAAGCCCATCTCTTTCCATCCATGCCAAGGGCAGAGCCTGGAGGGATGTCGAGACAGATGGCTCCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR CCA 72 bp | CTTTGGAGGACTGGATTCCAGCTTGTCCACCCTGGATaGGATGCGCACCTGAATGACGACTCCCATGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: LWRTGFQLVHPG*DAHLNDDSHDG Trigger: CCCATCATGGGAGTCGTCATTCAGGTGCGCATCCCATCCAGGGTGGACAAGCTGGAATCCAGTCCTCCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CCA 72 bp | CATGAGTTCCCACAGGGTCTGCACGTGGGTGAGCACTaGCCGGAAGCACCTAAACAGATCCAGTTCATGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HEFPQGLHVGEH*PEAPKQIQFMD Trigger: GTCCATGAACTGGATCTGTTTAGGTGCTTCCGGCCAGTGCTCACCCACGTGCAGACCCTGTGGGAACTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAACTGGCCACACAAAAGAACAGCCTGAGCTaGCTTTTGCAAGTGGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLRSPECWLTALSQLATQKNSLS*LLQVGC Trigger: GCACCCCACTTGCAAAAGCAAGCTCAGGCTGTTCTT...TTGTGTGGCCAGTTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR GCA 72 bp | CTACAGGTTTCTGATACTCAGCTGAGGGTTGGCTGCTaGTCCAGGTCCTCACTTCAGTCTGGACCACCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LQVSDTQLRVGC*SRSSLQSGPPQ Trigger: TTGGGGTGGTCCAGACTGAAGTGAGGACCTGGAGCAGCAGCCAACCCTCAGCTGAGTATCAGAAACCTGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR CCA 72 bp | AGCCATCTGTCTCGACATCCCTCCAGGCTCTGCCCTTaGCATGGATGGAAAGAGATGGGCTTGAGCCTACTT | + |
|
Preference number: 3 (lower is better) Translates to: SHLSRHPSRLCP*HGWKEMGLSLL Trigger: AAGTAGGCTCAAGCCCATCTCTTTCCATCCATGCCAAGGGCAGAGCCTGGAGGGATGTCGAGACAGATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR CCA 72 bp | GCAGCAGGTTCTCTTGATCACACTGCTTTGGAGGACTaGATTCCAGCTTGTCCACCCTGGATGGGATGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: AAGSLDHTALED*IPACPPWMGCA Trigger: TGCGCATCCCATCCAGGGTGGACAAGCTGGAATCCAGTCCTCCAAAGCAGTGTGATCAAGAGAACCTGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CCA 72 bp | AGCACTGGCCGGAAGCACCTAAACAGATCCAGTTCATaGACACTAGTGAGGACAACTGGAGCTGGCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: STGRKHLNRSSS*TLVRTTGAGSR Trigger: CCTGCTGCCAGCTCCAGTTGTCCTCACTAGTGTCCATGAACTGGATCTGTTTAGGTGCTTCCGGCCAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CCA 72 bp | GTGGCTCTGTATCTCAGCCACGCTCTCTGTTACATGTaGACACCTGCCTCAGGCCTTCCCTTCTTGGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: VALYLSHALCYM*TPASGLPFLVW Trigger: CCATACCAAGAAGGGAAGGCCTGAGGCAGGTGTCCACATGTAACAGAGAGCGTGGCTGAGATACAGAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CCA 72 bp | ATCGGTGCCCCTCCTTGCAATTCTAATTTCGCTGCCTaGTGGGGGACGCCTGACAGGCACAGAGTCAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: IGAPPCNSNFAA*WGTPDRHRVNF Trigger: AAAGTTGACTCTGTGCCTGTCAGGCGTCCCCCACCAGGCAGCGAAATTAGAATTGCAAGGAGGGGCACCGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR TCA 72 bp | GAGCTCCAGCTGTCACAGAGGATGGTGCCATGGTTCTaGAGATCCCTTAGAGACCAGGCTCTTAGTGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ELQLSQRMVPWF*RSLRDQALSGE Trigger: CTCACCACTAAGAGCCTGGTCTCTAAGGGATCTTCAGAACCATGGCACCATCCTCTGTGACAGCTGGAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR GCA 72 bp | CACATAGCCCAGATAGTGTGCTGGCTCCCTCTGCAATaGCAAGGGGGCCTTGTTGTTATACGACCGATCATC | + |
|
Preference number: 3 (lower is better) Translates to: HIAQIVCWLPLQ*QGGLVVIRPII Trigger: GATGATCGGTCGTATAACAACAAGGCCCCCTTGGCATTGCAGAGGGAGCCAGCACACTATCTGGGCTATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CCA 72 bp | GTCATTCCAAATGTCATTTTACTGCTGGGACAAGGGTaGTTCTGGGAGGGGGCTGAAGCTGAGGTAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VIPNVILLLGQG*FWEGAEAEVGA Trigger: GGCTCCTACCTCAGCTTCAGCCCCCTCCCAGAACCACCCTTGTCCCAGCAGTAAAATGACATTTGGAATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR CCA 72 bp | CACCTGTCTGAAGTACACATAGCCCAGATAGTGTGCTaGCTCCCTCTGCAATGCCAAGGGGGCCTTGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLSEVHIAQIVC*LPLQCQGGLVV Trigger: AACAACAAGGCCCCCTTGGCATTGCAGAGGGAGCCAGCACACTATCTGGGCTATGTGTACTTCAGACAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGATGTAGCAGACAAGCTAGAGCCTaGAAGGGAAAGGGAAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PLTQLIPSWERESRRGCSRQARA*KGKGSL Trigger: CAAGCTTCCCTTTCCCTTCAAGGCTCTAGCTTGTCT...GCTACATCCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR TCA 72 bp | AGTAACCCCTCTTCACAGAGCTGTCCTTCACCTGTCTaGAGTACACATAGCCCAGATAGTGTGCTGGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SNPSSQSCPSPV*STHSPDSVLAP Trigger: GGGAGCCAGCACACTATCTGGGCTATGTGTACTTCAGACAGGTGAAGGACAGCTCTGTGAAGAGGGGTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR GCA 72 bp | GTAACCAGGACAAGCCCCTCGAAGAAACTGGAACTTTaGTCATTCCTGTGTGTCAGCCTTGGGTTTGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VTRTSPSKKLEL*SFLCVSLGFVP Trigger: GGGCACAAACCCAAGGCTGACACACAGGAATGAGCAAAGTTCCAGTTTCTTCGAGGGGCTTGTCCTGGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR GCA 72 bp | GTATCTCAGCCACGCTCTCTGTTACATGTGGACACCTaGCTCAGGCCTTCCCTTCTTGGTATGGGGACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSQPRSLLHVDT*LRPSLLGMGTK Trigger: TTTAGTCCCCATACCAAGAAGGGAAGGCCTGAGGCAGGTGTCCACATGTAACAGAGAGCGTGGCTGAGATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CCA 72 bp | TCACAAATAGCTTCCAGGTGCAGAGCTTCCAGCTTCTaGGCCATCTCTTTGTGTCGTTGCCGATACCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SQIASRCRASSF*AISLCRCRYQP Trigger: TGGCTGGTATCGGCAACGACACAAAGAGATGGCCCAGAAGCTGGAAGCTCTGCACCTGGAAGCTATTTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCTCGGACTTGTCCTTCATCCAAGCCTCAATGTTCGCCTCACAAATAGCTTCTTCTGGGCCATCTCTTaGTGTCGTTGCCGATACCAG | + |
|
Preference number: 3 (lower is better) Translates to: HLGLVLHPSLNVRLTNSFFWAIS*CRCRYQ Trigger: CTGGTATCGGCAACGACACAAAGAGATGGCCCAGAA...GAAGCTATTTGTGAGGCGAACATTGAGGCTTGGATGAAGGACAAGTCCGAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR TCA 72 bp | AGGCCAGGTAGCAGATGCTGCTTTTCTCCTTGTCTGTaGGCCGGAAGTCACTTGGGTAGACTAGCCTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: RPGSRCCFSPCL*AGSHLGRLAFV Trigger: AACAAAGGCTAGTCTACCCAAGTGACTTCCGGCTCACAGACAAGGAGAAAAGCAGCATCTGCTACCTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR GCA 72 bp | GGAAGAGCACAGAACAGCACCTCCAAGAGATACCTCTaGCTACGGGTTCAATTGTACCCTAAGGCCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GRAQNSTSKRYL*LRVQLYPKAKT Trigger: TGTCTTGGCCTTAGGGTACAATTGAACCCGTAGGCAGAGGTATCTCTTGGAGGTGCTGTTCTGTGCTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR GCA 72 bp | AAAGCATCACAGGATGTACGGCCCATCCTCTCAGAATaGCCCTTTTCCCTGATACTGCCTGACACTGACACT | + |
|
Preference number: 3 (lower is better) Translates to: KASQDVRPILSE*PFSLILPDTDT Trigger: AGTGTCAGTGTCAGGCAGTATCAGGGAAAAGGGGCATTCTGAGAGGATGGGCCGTACATCCTGTGATGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR GCA 72 bp | CACCGGCGCTGGCCATTGGTCAATCTCATTACAAACTaGTTCCAGGCAGGGTGCCAACTTCTCAAAGTATTC | + |
|
Preference number: 3 (lower is better) Translates to: HRRWPLVNLITN*FQAGCQLLKVF Trigger: GAATACTTTGAGAAGTTGGCACCCTGCCTGGAAGCAGTTTGTAATGAGATTGACCAATGGCCAGCGCCGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR GCA 72 bp | CAAGCCTCAATGTTCGCCTCACAAATAGCTTCCAGGTaGAGAGCTTCCAGCTTCTGGGCCATCTCTTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QASMFASQIASR*RASSFWAISLC Trigger: ACACAAAGAGATGGCCCAGAAGCTGGAAGCTCTGCACCTGGAAGCTATTTGTGAGGCGAACATTGAGGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CCA 72 bp | TGGCATGGATGGAAAGAGATGGGCTTGAGCCTACTTTaGACAGAAGCTCCACTAACTCAGCTGATCCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: WHGWKEMGLSLL*TEAPLTQLIPS Trigger: GGATGGGATCAGCTGAGTTAGTGGAGCTTCTGTCCAAAGTAGGCTCAAGCCCATCTCTTTCCATCCATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR TCA 72 bp | CCAGGATCAGTGGGGAAGGGCGAGGCAGTACATACTTaGGGTTTGATTAAAGAGTCCAAAGAACCCAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PGSVGKGEAVHT*GLIKESKEPRT Trigger: TGTTCTGGGTTCTTTGGACTCTTTAATCAAACCTCAAGTATGTACTGCCTCGCCCTTCCCCACTGATCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR TCA 72 bp | GTGGGGCACCCTGAAGCCTACTGTGTGAAAGTCAAGTaGAAACTAGCACGAGAAACACACTGCAGTGATATT | + |
|
Preference number: 3 (lower is better) Translates to: VGHPEAYCVKVK*KLARETHCSDI Trigger: AATATCACTGCAGTGTGTTTCTCGTGCTAGTTTTCACTTGACTTTCACACAGTAGGCTTCAGGGTGCCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR GCA 72 bp | TTGGTCAATCTCATTACAAACTGCTTCCAGGCAGGGTaGCAACTTCTCAAAGTATTCAGGGGCAATCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LVNLITNCFQAG*QLLKVFRGNQA Trigger: AGCCTGATTGCCCCTGAATACTTTGAGAAGTTGGCACCCTGCCTGGAAGCAGTTTGTAATGAGATTGACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CCA 72 bp | GAAACTGGAACTTTGCTCATTCCTGTGTGTCAGCCTTaGGTTTGTGCCCTAAGCAGCACTGTTGTGTCTATA | + |
|
Preference number: 3 (lower is better) Translates to: ETGTLLIPVCQP*VCALSSTVVSI Trigger: TATAGACACAACAGTGCTGCTTAGGGCACAAACCCAAGGCTGACACACAGGAATGAGCAAAGTTCCAGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR CAA 72 bp | CTGAGCCCGCTGCAGTGTCACCTCCTTCACGGGGAGTaGGTGGCCCTGTGCCCGTACCAGCTTCTCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPLQCHLLHGE*VALCPYQLLPK Trigger: CTTCGGGAGAAGCTGGTACGGGCACAGGGCCACCAACTCCCCGTGAAGGAGGTGACACTGCAGCGGGCTCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCTCTCAAGTAGCTGCCTAGGCAAAGTACCCCTTCCCACCCTCTGTCCAGGTAGGTTCAGGGTCTaGCCAGGCACCGGCGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SALSSSCLGKVPLPTLCPGRFRV*PGTGAG Trigger: GCCAGCGCCGGTGCCTGGGCAGACCCTGAACCTACC...TGGACAGAGGGTGGGAAGGGGTACTTTGCCTAGGCAGCTACTTGAGAGGGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAACTGGCCACACAAGTCTCCCAGGCACCCTaGGTGCGAGTCTGGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLRSPECWLTALSQLATQVSQAP*VRVWEG Trigger: GCCTTCCCAGACTCGCACTCAGGGTGCCTGGGAGAC...TTGTGTGGCCAGTTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGCTCCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGGGGTCTGCACGTGGGTaGGCACTGGCCGGAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RSSTNSADPILGERESERGSARG*ALAGST Trigger: GGTGCTTCCGGCCAGTGCTCACCCACGTGCAGACCC...CCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGGAGCTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCACCCAACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAAAGTTCCCACAGGGTCTaGACGTGGGTGAGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPPNPLRSPECWLTALSQSSHRV*TWVSTG Trigger: GCCAGTGCTCACCCACGTGCAGACCCTGTGGGAACT...TTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGTTGGGTGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGGAAGCTGGAGGGTAAAAGAGTCCTCCTGTCCTTCCGGTCTGTCCCTGAGGATGCAGGTGAGCTaGGGTCCCGCATGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGSWRVKESSCPSGLSLRMQVS*GPACSR Trigger: CCTGGAGCATGCGGGACCCCAGCTCACCTGCATCCT...CAGGGACAGACCGGAAGGACAGGAGGACTCTTTTACCCTCCAGCTTCCTGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCACCCAACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAAGACCGATCATCCACCTaGCAGAGGCTCCTTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPNPLRSPECWLTALSQDRSST*QRLLCP Trigger: GGGACAAAGGAGCCTCTGGCAGGTGGATGATCGGTC...TTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGTTGGGTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGGAAGCTGGAGGGTAAAAGAGTCCTCCTGTCCTTCCGGTCTGTCCCTGGCTCCAGATCGAAGGTaGCCACGCACACACACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KAGSWRVKESSCPSGLSLAPDRR*PRTHTP Trigger: TGGAGTGTGTGTGCGTGGTCACCTTCGATCTGGAGC...CAGGGACAGACCGGAAGGACAGGAGGACTCTTTTACCCTCCAGCTTCCTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGGAAGCTGGAGGGTAAAAGAGTCCTCCTGTCCTTCCGGTCTGTCCCTGACTAGCTCTAGCGCCTaGCCCAGCTCCAGATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KAGSWRVKESSCPSGLSLTSSSA*PSSRSK Trigger: CTTCGATCTGGAGCTGGGCCAGGCGCTAGAGCTAGT...CAGGGACAGACCGGAAGGACAGGAGGACTCTTTTACCCTCCAGCTTCCTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGGCAGGCGGTATACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAAAAACAGCCGGACGAATaGCAGGCGGGACACCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PAGRRYTLPVTRTSPSKKKQPDE*QAGHQH Trigger: GTGCTGGTGTCCCGCCTGCCATTCGTCCGGCTGTTT...TTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGTATACCGCCTGCCTGCTGG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR CCA 90 bp | GATGTACGGCCCATCCTCTCAGAATGCCCCTTTTCCCTGATACTGCCTGACACTGGGGCTGGAGGCAGCTaGTTAGGGCTAGCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DVRPILSECPFSLILPDTGAGGS*LGLAPA Trigger: AGCTGGTGCTAGCCCTAACCAGCTGCCTCCAGCCCC...AGTGTCAGGCAGTATCAGGGAAAAGGGGCATTCTGAGAGGATGGGCCGTACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR CAA 72 bp | TGTGCTGGCTCCCTCTGCAATGCCAAGGGGGCCTTGTaGTTATACGACCGATCATCCACCTGCCAGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CAGSLCNAKGAL*LYDRSSTCQRL Trigger: GAGCCTCTGGCAGGTGGATGATCGGTCGTATAACAACAAGGCCCCCTTGGCATTGCAGAGGGAGCCAGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| 3UTR CAA 72 bp | CTCTGCACATCCCATGGCCGCTTCTTCTGTACGCCCTaGAGCAGTCGTTTAAGCAGCGCTTTGTCCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCTSHGRFFCTP*SSRLSSALSRW Trigger: CCACCGGGACAAAGCGCTGCTTAAACGACTGCTCAAGGGCGTACAGAAGAAGCGGCCATGGGATGTGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAACTGGCCACACATACGGAAACTGAACTaGGTGTCTCCCAGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDPLNAGSLRSPNWPHIRKLN*VSPRHP Trigger: AGGGTGCCTGGGAGACACTCAGTTCAGTTTCCGTAT...GTGTGGCCAGTTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR TCA 90 bp | TCTGCCCTCTCAAGTAGCTGCCTAGGCAAAGTACCCCTTCCCACCCTCTGTCCAGACGCATACGGAAACTaGACTGAGTGTCTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SALSSSCLGKVPLPTLCPDAYGN*TECLPG Trigger: GCCTGGGAGACACTCAGTTCAGTTTCCGTATGCGTC...TGGACAGAGGGTGGGAAGGGGTACTTTGCCTAGGCAGCTACTTGAGAGGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR TCA 90 bp | TCTGCCCTCTCAAGTAGCTGCCTAGGCAAAGTACCCCTTCCCACCCTCTGTCCATCTTCTGTAGCGGCATaGGGCTGGCCATGTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SALSSSCLGKVPLPTLCPSSVAA*GWPCSA Trigger: AGCACTACATGGCCAGCCTCATGCCGCTACAGAAGA...TGGACAGAGGGTGGGAAGGGGTACTTTGCCTAGGCAGCTACTTGAGAGGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCACCCAACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAAATAGCCCAGATAGTGTaGTGGCTCCCTCTGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: PPPNPLRSPECWLTALSQIAQIV*WLPLQC Trigger: GCATTGCAGAGGGAGCCAGCACACTATCTGGGCTAT...TTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGTTGGGTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR GCA 90 bp | GATGTACGGCCCATCCTCTCAGAATGCCCCTTTTCCCTGATACTGCCTGACACTCTCAGCAGGGCACTCTaGACATCCCATGGCCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DVRPILSECPFSLILPDTLSRAL*TSHGRF Trigger: GAAGCGGCCATGGGATGTGCAGAGTGCCCTGCTGAG...AGTGTCAGGCAGTATCAGGGAAAAGGGGCATTCTGAGAGGATGGGCCGTACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCTCTCAAGTAGCTGCCTAGGCAAAGTACCCCTTCCCACCCTCTGTCCACTTGTCCACCCTGGATaGGATGCGCACCTGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SALSSSCLGKVPLPTLCPLVHPG*DAHLND Trigger: GTCATTCAGGTGCGCATCCCATCCAGGGTGGACAAG...TGGACAGAGGGTGGGAAGGGGTACTTTGCCTAGGCAGCTACTTGAGAGGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGCTCCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGCCAGCTTGTCCACCCTaGATGGGATGCGCACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSSTNSADPILGERESERPACPP*MGCAPE Trigger: TTCAGGTGCGCATCCCATCCAGGGTGGACAAGCTGG...CCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGGAGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGGCAGGCGGTATACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAACCAATTCGGAGGACATaGGGCCAGTGCTGGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PAGRRYTLPVTRTSPSKKPIRRT*GQCWSV Trigger: AACACTCCAGCACTGGCCTCATGTCCTCCGAATTGG...TTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGTATACCGCCTGCCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR GCA 90 bp | ACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAACTGGAACTTTGCTCATTCCCCAGGCACCCTGAGTaGGAGTCTGGGAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLPVTRTSPSKKLELCSFPRHPE*ESGKAR Trigger: CCTGGCCTTCCCAGACTCGCACTCAGGGTGCCTGGG...GAATGAGCAAAGTTCCAGTTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTCCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGTGGCTCCCTCTGCAATaGCAAGGGGGCCTTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSSTNSADPILGERESERWLPLQ*QGGLVV Trigger: AACAACAAGGCCCCCTTGGCATTGCAGAGGGAGCCA...CCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGGAGCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCTCTCAAGTAGCTGCCTAGGCAAAGTACCCCTTCCCACCCTCTGTCCAACTAGTGAGGACAACTaGAGCTGGCAGCAGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SALSSSCLGKVPLPTLCPTSEDN*SWQQVL Trigger: GAGAACCTGCTGCCAGCTCCAGTTGTCCTCACTAGT...TGGACAGAGGGTGGGAAGGGGTACTTTGCCTAGGCAGCTACTTGAGAGGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGGCAGGCGGTATACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAAGGAGGTGTAGAGGCCTaGCTTGGTGTCAAGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PAGRRYTLPVTRTSPSKKGGVEA*LGVKGL Trigger: AAGACCCTTGACACCAAGCCAGGCCTCTACACCTCC...TTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGTATACCGCCTGCCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGCTCCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGACTCTGCACATCCCATaGCCGCTTCTTCTGTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSSTNSADPILGERESERTLHIP*PLLLYA Trigger: GGCGTACAGAAGAAGCGGCCATGGGATGTGCAGAGT...CCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGGAGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR TCA 90 bp | TCTGCCCTCTCAAGTAGCTGCCTAGGCAAAGTACCCCTTCCCACCCTCTGTCCATTTTCTCCTTGTCTGTaGGCCGGAAGTCACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SALSSSCLGKVPLPTLCPFSPCL*AGSHLG Trigger: ACCCAAGTGACTTCCGGCTCACAGACAAGGAGAAAA...TGGACAGAGGGTGGGAAGGGGTACTTTGCCTAGGCAGCTACTTGAGAGGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR GCA 90 bp | ATTCAGGGACCAGGCTGTGTTCCACGTCCCATTCTTACTGCTAGGACAAAAGTGTGTGCTGGCTCCCTCTaGAATGCCAAGGGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IQGPGCVPRPILTARTKVCAGSL*NAKGAL Trigger: CAAGGCCCCCTTGGCATTGCAGAGGGAGCCAGCACA...CACTTTTGTCCTAGCAGTAAGAATGGGACGTGGAACACAGCCTGGTCCCTGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGACAAAGAGCTTCTGCCCTCTCAAGTAGCTGCCTAGGCAAAGTACCCCTTCAGAACTTCAGGGGCTaGAGGCAGCTGGTTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGQRASALSSSCLGKVPLQNFRG*RQLVRA Trigger: AGCCCTAACCAGCTGCCTCCAGCCCCTGAAGTTCTG...AAGGGGTACTTTGCCTAGGCAGCTACTTGAGAGGGCAGAAGCTCTTTGTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| 3UTR CAA 72 bp | GTTATACGACCGATCATCCACCTGCCAGAGGCTCCTTaGTCCCCCACACTGACGCATACGGAAACTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VIRPIIHLPEAP*SPTLTHTETEL Trigger: CAGTTCAGTTTCCGTATGCGTCAGTGTGGGGGACAAAGGAGCCTCTGGCAGGTGGATGATCGGTCGTATAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| CDS-3UTR TCA 90 bp | CGGAAGCACCTAAACAGATCCAGTTCATGGACACTAGTGAGGACAACTGGAGCTGCTCCAGATCGAAGGTaGCCACGCACACACACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKHLNRSSSWTLVRTTGAAPDRR*PRTHTP Trigger: TGGAGTGTGTGTGCGTGGTCACCTTCGATCTGGAGC...AGCTCCAGTTGTCCTCACTAGTGTCCATGAACTGGATCTGTTTAGGTGCTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAACTGGCCACACAATGCTTCCAGGCAGGGTaGCAACTTCTCAAAGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: PLRSPECWLTALSQLATQCFQAG*QLLKVF Trigger: GAATACTTTGAGAAGTTGGCACCCTGCCTGGAAGCA...TTGTGTGGCCAGTTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR GCA 90 bp | ACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAACTGGAACTTTGCTCATTCGGGCACAGGACTGCTTaGAGGTCCTTGGGAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLPVTRTSPSKKLELCSFGHRTA*RSLGRE Trigger: CTCCCTTCCCAAGGACCTGCAAGCAGTCCTGTGCCC...GAATGAGCAAAGTTCCAGTTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCACCCAACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAATTGATCACACTGCTTTaGAGGACTGGATTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPPNPLRSPECWLTALSQLITLL*RTGFQL Trigger: AAGCTGGAATCCAGTCCTCCAAAGCAGTGTGATCAA...TTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGTTGGGTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CCA 90 bp | ATTCAGGGACCAGGCTGTGTTCCACGTCCCATTCTTACTGCTAGGACAAAAGTGGGTCCCCTGACATCTTaGGCTCCCCAATTCGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: IQGPGCVPRPILTARTKVGPLTS*APQFGG Trigger: TCCTCCGAATTGGGGAGCCCAAGATGTCAGGGGACC...CACTTTTGTCCTAGCAGTAAGAATGGGACGTGGAACACAGCCTGGTCCCTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CCA 90 bp | AGACTTCTGGAAGTAACCCCTCTTCACAGAGCTGTCCTTCACCTGTCTGAAGTAGTCACCTCTAGCGCCTaGCCCAGCTCCAGATCGAAG | + |
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Preference number: 4 (lower is better) Translates to: RLLEVTPLHRAVLHLSEVVTSSA*PSSRSK Trigger: CTTCGATCTGGAGCTGGGCCAGGCGCTAGAGGTGAC...TACTTCAGACAGGTGAAGGACAGCTCTGTGAAGAGGGGTTACTTCCAGAAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| 3UTR CAA 72 bp | AGGCTCTGCCCTTGGCATGGATGGAAAGAGATGGGCTaGAGCCTACTTTGGACAGAAGCTCCACTAACTCAG | + |
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Preference number: 4 (lower is better) Translates to: RLCPWHGWKEMG*SLLWTEAPLTQ Trigger: CTGAGTTAGTGGAGCTTCTGTCCAAAGTAGGCTCAAGCCCATCTCTTTCCATCCATGCCAAGGGCAGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CAA 72 bp | AGTTTCAGGACCAGGTCGACCACTTCCACCTCGGACTaGTCCTTCATCCAAGCCTCAATGTTCGCCTCACAA | + |
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Preference number: 4 (lower is better) Translates to: SFRTRSTTSTSD*SFIQASMFASQ Trigger: TTGTGAGGCGAACATTGAGGCTTGGATGAAGGACAAGTCCGAGGTGGAAGTGGTCGACCTGGTCCTGAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| CDS-3UTR TCA 90 bp | CCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGATGTAGCTGTCCTTCACCTGTCTaGAGTACACATAGCCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: PLTQLIPSWERESRRGCSCPSPV*STHSPD Trigger: ATCTGGGCTATGTGTACTTCAGACAGGTGAAGGACA...GCTACATCCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR TCA 90 bp | ATTCAGGGACCAGGCTGTGTTCCACGTCCCATTCTTACTGCTAGGACAAAAGTGCTTTGGAAGGTCCCCTaGCATCTTGGGCTCCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: IQGPGCVPRPILTARTKVLWKVP*HLGLPN Trigger: ATTGGGGAGCCCAAGATGTCAGGGGACCTTCCAAAG...CACTTTTGTCCTAGCAGTAAGAATGGGACGTGGAACACAGCCTGGTCCCTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR TCA 90 bp | ATTCAGGGACCAGGCTGTGTTCCACGTCCCATTCTTACTGCTAGGACAAAAGTGGGCTCTTCCAGGGTGTaGTGTTCTTCTGTAGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: IQGPGCVPRPILTARTKVGSSRV*CSSVAA Trigger: TGCCGCTACAGAAGAACATCACACCCTGGAAGAGCC...CACTTTTGTCCTAGCAGTAAGAATGGGACGTGGAACACAGCCTGGTCCCTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR TCA 90 bp | ATTCAGGGACCAGGCTGTGTTCCACGTCCCATTCTTACTGCTAGGACAAAAGTGGTATCAATGTACAGCTaGGCCCGCTGCAGTGTCACC | + |
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Preference number: 4 (lower is better) Translates to: IQGPGCVPRPILTARTKVVSMYS*ARCSVT Trigger: GGTGACACTGCAGCGGGCTCAGCTGTACATTGATAC...CACTTTTGTCCTAGCAGTAAGAATGGGACGTGGAACACAGCCTGGTCCCTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR GCA 90 bp | GATGTACGGCCCATCCTCTCAGAATGCCCCTTTTCCCTGATACTGCCTGACACTCAAATAGCTTCCAGGTaGAGAGCTTCCAGCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: DVRPILSECPFSLILPDTQIASR*RASSFW Trigger: CCAGAAGCTGGAAGCTCTGCACCTGGAAGCTATTTG...AGTGTCAGGCAGTATCAGGGAAAAGGGGCATTCTGAGAGGATGGGCCGTACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR TCA 90 bp | ATTCAGGGACCAGGCTGTGTTCCACGTCCCATTCTTACTGCTAGGACAAAAGTGGGCAGCAGGTTCTCTTaGTCACACTGCTTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IQGPGCVPRPILTARTKVGSRFS*SHCFGG Trigger: TCCTCCAAAGCAGTGTGATCAAGAGAACCTGCTGCC...CACTTTTGTCCTAGCAGTAAGAATGGGACGTGGAACACAGCCTGGTCCCTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR GCA 90 bp | CCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAACTGGCCACACAAATCTCTTTGTGTCGTTaGCGATACCAGCCATCAAAA | + |
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Preference number: 4 (lower is better) Translates to: PLRSPECWLTALSQLATQISLCR*RYQPSK Trigger: TTTTGATGGCTGGTATCGGCAACGACACAAAGAGAT...TTGTGTGGCCAGTTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CCA 90 bp | TCAGGACAAAGAGCTTCTGCCCTCTCAAGTAGCTGCCTAGGCAAAGTACCCCTTAGAGCTTCCAGCTTCTaGGCCATCTCTTTGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGQRASALSSSCLGKVPLRASSF*AISLCR Trigger: ACGACACAAAGAGATGGCCCAGAAGCTGGAAGCTCT...AAGGGGTACTTTGCCTAGGCAGCTACTTGAGAGGGCAGAAGCTCTTTGTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CAA 72 bp | AGTAACCAGGACAAGCCCCTCGAAGAAACTGGAACTTaGCTCATTCCTGTGTGTCAGCCTTGGGTTTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SNQDKPLEETGT*LIPVCQPWVCA Trigger: GGCACAAACCCAAGGCTGACACACAGGAATGAGCAAAGTTCCAGTTTCTTCGAGGGGCTTGTCCTGGTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CAA 72 bp | TTGGCATGGATGGAAAGAGATGGGCTTGAGCCTACTTaGGACAGAAGCTCCACTAACTCAGCTGATCCCATC | + |
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Preference number: 4 (lower is better) Translates to: LAWMERDGLEPT*DRSSTNSADPI Trigger: GATGGGATCAGCTGAGTTAGTGGAGCTTCTGTCCAAAGTAGGCTCAAGCCCATCTCTTTCCATCCATGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| 3UTR CAA 72 bp | GACCTGTCTGGTGGTGGCTGCTCAGAACTTGATTGGTaGATGAATGAATGCATCAATGGGCCACTTTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: DLSGGGCSELDW*MNECINGPLFA Trigger: GGCAAAAAGTGGCCCATTGATGCATTCATTCATCAACCAATCAAGTTCTGAGCAGCCACCACCAGACAGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229755.2 |
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| CDS-3UTR CAA 90 bp | AGAAGCTCCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGCTCCTTCACGGGGAGTaGGTGGCCCTGTGCCCGTAC | + |
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Preference number: 5 (lower is better) Translates to: RSSTNSADPILGERESERLLHGE*VALCPY Trigger: GTACGGGCACAGGGCCACCAACTCCCCGTGAAGGAG...CCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGGAGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CAA 90 bp | CCAGCAGGCAGGCGGTATACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAACCCAGCCAGTCACCCTaGAGGATGCAGGTGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PAGRRYTLPVTRTSPSKKPSQSP*RMQVSW Trigger: CCAGCTCACCTGCATCCTCAAGGGTGACTGGCTGGG...TTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGTATACCGCCTGCCTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CAA 90 bp | TCTGCCCTCTCAAGTAGCTGCCTAGGCAAAGTACCCCTTCCCACCCTCTGTCCAAGGGCACAGGACTGCTaGCAGGTCCTTGGGAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: SALSSSCLGKVPLPTLCPRAQDC*QVLGKG Trigger: TCCCTTCCCAAGGACCTGCAAGCAGTCCTGTGCCCT...TGGACAGAGGGTGGGAAGGGGTACTTTGCCTAGGCAGCTACTTGAGAGGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CAA 90 bp | CCTCCACCCAACCCTCTTAGATCCCCTGAATGCTGGCTCACTGCGCTCTCCCAATTCTGGGCCATCTCTTaGTGTCGTTGCCGATACCAG | + |
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Preference number: 5 (lower is better) Translates to: PPPNPLRSPECWLTALSQFWAIS*CRCRYQ Trigger: CTGGTATCGGCAACGACACAAAGAGATGGCCCAGAA...TTGGGAGAGCGCAGTGAGCCAGCATTCAGGGGATCTAAGAGGGTTGGGTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CAA 90 bp | ATTCAGGGACCAGGCTGTGTTCCACGTCCCATTCTTACTGCTAGGACAAAAGTGAGGTCCCCTGACATCTaGGGCTCCCCAATTCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: IQGPGCVPRPILTARTKVRSPDI*GSPIRR Trigger: CCTCCGAATTGGGGAGCCCAAGATGTCAGGGGACCT...CACTTTTGTCCTAGCAGTAAGAATGGGACGTGGAACACAGCCTGGTCCCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CAA 90 bp | CCAGCAGGCAGGCGGTATACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAAATGCTGCTTTTCTCCTaGTCTGTGAGCCGGAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: PAGRRYTLPVTRTSPSKKMLLFS*SVSRKS Trigger: TGACTTCCGGCTCACAGACAAGGAGAAAAGCAGCAT...TTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGTATACCGCCTGCCTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CAA 90 bp | ACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAACTGGAACTTTGCTCATTCCGTTTAAGCAGCGCTTaGTCCCGGTGGAGGTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TLPVTRTSPSKKLELCSFRLSSA*SRWRWA Trigger: TGCCCACCTCCACCGGGACAAAGCGCTGCTTAAACG...GAATGAGCAAAGTTCCAGTTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CAA 90 bp | ACTCTACCAGTAACCAGGACAAGCCCCTCGAAGAAACTGGAACTTTGCTCATTCGGACTGGATTCCAGCTaGTCCACCCTGGATGGGATG | + |
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Preference number: 5 (lower is better) Translates to: TLPVTRTSPSKKLELCSFGLDSS*STLDGM Trigger: CATCCCATCCAGGGTGGACAAGCTGGAATCCAGTCC...GAATGAGCAAAGTTCCAGTTTCTTCGAGGGGCTTGTCCTGGTTACTGGTAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CAA 90 bp | CCACTAACTCAGCTGATCCCATCCTGGGAGAGAGAGAGTCGGAGAGGATGTAGCCATCTCTTTGTGTCGTaGCCGATACCAGCCATCAAA | + |
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Preference number: 5 (lower is better) Translates to: PLTQLIPSWERESRRGCSHLFVS*PIPAIK Trigger: TTTGATGGCTGGTATCGGCAACGACACAAAGAGATG...GCTACATCCTCTCCGACTCTCTCTCTCCCAGGATGGGATCAGCTGAGTTAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CAA 90 bp | ATTCAGGGACCAGGCTGTGTTCCACGTCCCATTCTTACTGCTAGGACAAAAGTGTGGCAGCAGGTTCTCTaGATCACACTGCTTTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: IQGPGCVPRPILTARTKVWQQVL*ITLLWR Trigger: CCTCCAAAGCAGTGTGATCAAGAGAACCTGCTGCCA...CACTTTTGTCCTAGCAGTAAGAATGGGACGTGGAACACAGCCTGGTCCCTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS-3UTR CAA 90 bp | CAATTGTACCCTAAGGCCAAGACAGCAGAGAATATAGCATCAGGCTACAGCCCAACTTCCACCTCGGACTaGTCCTTCATCCAAGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: QLYPKAKTAENIASGYSPTSTSD*SFIQAS Trigger: TGAGGCTTGGATGAAGGACAAGTCCGAGGTGGAAGT...TGGGCTGTAGCCTGATGCTATATTCTCTGCTGTCTTGGCCTTAGGGTACAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS CAA 72 bp | CCGCGGTCCGCGCCGCGCGGCCGGAGGACGAGGATCTaGTCGCGCCTAGTCCTCCGCCAGCTTGCCGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PRSAPRGRRTRI*SRLVLRQLAGA Trigger: GGCCCCGGCAAGCTGGCGGAGGACTAGGCGCGACAAGATCCTCGTCCTCCGGCCGCGCGGCGCGGACCGCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078953.9 ENSMUST00000229755.2 |
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| CDS TCA 72 bp | AGGCCAGGTAGCAGATGCTGCTTTTCTCCTTGTCTGTaGGCCGGAAGTCACTTGGGTAGACTAGCTCTAGCG | + |
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Preference number: 6 (lower is better) Translates to: RPGSRCCFSPCL*AGSHLGRLALA Trigger: CGCTAGAGCTAGTCTACCCAAGTGACTTCCGGCTCACAGACAAGGAGAAAAGCAGCATCTGCTACCTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS CCA 72 bp | GGGTTTGTGACTCCCAGGACCACGTTTGGTGGAGCCTaGGTTCGAGTTGTAAGCTCCTTGAACTCACTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GFVTPRTTFGGA*VRVVSSLNSLS Trigger: TGACAGTGAGTTCAAGGAGCTTACAACTCGAACCCAGGCTCCACCAAACGTGGTCCTGGGAGTCACAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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| CDS CCA 72 bp | GATAAAGAAAGGGTTTGTGACTCCCAGGACCACGTTTaGTGGAGCCTGGGTTCGAGTTGTAAGCTCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: DKERVCDSQDHV*WSLGSSCKLLE Trigger: TTCAAGGAGCTTACAACTCGAACCCAGGCTCCACCAAACGTGGTCCTGGGAGTCACAAACCCTTTCTTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078953.9 |
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