Pregenerated sensors for DENND6A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040818Ensembl transcript IDs: ENSMUST00000037585.9, ENSMUST00000203874.3, ENSMUST00000224111.2, ENSMUST00000224248.2, ENSMUST00000224378.2
Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCTTCACAGCATGGGGGTGCAGACTGAGGCAAGCTCACTGAACTaGACTACAGGTGCAGCAGAATGCAGATCACAACCCACCTACCTC | + |
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Preference number: 1 (lower is better) Translates to: WLHSMGVQTEASSLN*TTGAAECRSQPTYL Trigger: GAGGTAGGTGGGTTGTGATCTGCATTCTGCTGCACCTGTAGTTCAGTTCAGTGAGCTTGCCTCAGTCTGCACCCCCATGCTGTGAAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
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| 3UTR TCA 90 bp | AGCAGACTACAACACACCATGGCTTCACAGCATGGGGGTGCAGACTaGGGCAAGCTCACTGAACTGAACTACAGGTGCAGCAGAATGCAG | + |
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Preference number: 1 (lower is better) Translates to: SRLQHTMASQHGGAD*GKLTELNYRCSRMQ Trigger: CTGCATTCTGCTGCACCTGTAGTTCAGTTCAGTGAGCTTGCCTCAGTCTGCACCCCCATGCTGTGAAGCCATGGTGTGTTGTAGTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
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| 3UTR TCA 90 bp | TGTGCACCCATACAAGTGCCCATCCATCCATTATGCTGGGCATGGTaGCACTTGCCTTTAATCACAGCACTAGGAAGGGAGAGACATGGA | + |
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Preference number: 1 (lower is better) Translates to: CAPIQVPIHPLCWAW*HLPLITALGRERHG Trigger: TCCATGTCTCTCCCTTCCTAGTGCTGTGATTAAAGGCAAGTGTCACCATGCCCAGCATAATGGATGGATGGGCACTTGTATGGGTGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR GCA 90 bp | GCTCAGAAGGGCAGGTACTTAAGTCACAGCTATTTACACATGTGCTaGTTTGTGTGTGCCTATCTGAACAGTGGCTTCTGCAACACTCCC | + |
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Preference number: 1 (lower is better) Translates to: AQKGRYLSHSYLHMC*FVCAYLNSGFCNTP Trigger: GGGAGTGTTGCAGAAGCCACTGTTCAGATAGGCACACACAAAGCAGCACATGTGTAAATAGCTGTGACTTAAGTACCTGCCCTTCTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR TCA 90 bp | TTTAAACCTCAGTACACTTCATTTCACTTCACTGTCTCTGCCTTCTaGGCACTGGGATTAAAGGTGTACACCACCGGCGTCTGGCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: FKPQYTSFHFTVSAF*ALGLKVYTTGVWLG Trigger: TCCTAGCCAGACGCCGGTGGTGTACACCTTTAATCCCAGTGCTCAGAAGGCAGAGACAGTGAAGTGAAATGAAGTGTACTGAGGTTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR TCA 90 bp | TTTTTAGACTGTACAGTCTCTACAAGTGTCCTGTGTCGTAGGCTGTaGGACCAAGATGAAATGCAGTCCAACCACATGCACAGTGCCATG | + |
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Preference number: 1 (lower is better) Translates to: FLDCTVSTSVLCRRL*DQDEMQSNHMHSAM Trigger: CATGGCACTGTGCATGTGGTTGGACTGCATTTCATCTTGGTCTCACAGCCTACGACACAGGACACTTGTAGAGACTGTACAGTCTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
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| 3UTR CCA 90 bp | TTGTACAGCAAGTCCTCTCACCCACTGAATTCTCTCTCCAGCACCTaGCTCTTTCTAATAGCATCTAACTTTATAGCCCAGAGCTTGAAC | + |
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Preference number: 1 (lower is better) Translates to: LYSKSSHPLNSLSST*LFLIASNFIAQSLN Trigger: GTTCAAGCTCTGGGCTATAAAGTTAGATGCTATTAGAAAGAGCCAGGTGCTGGAGAGAGAATTCAGTGGGTGAGAGGACTTGCTGTACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR CCA 90 bp | ATGGTGACACTTGCCTTTAATCACAGCACTAGGAAGGGAGAGACATaGAATCTCTGTGAGCTCAAAACCAGTCCAGACATTAGTGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: MVTLAFNHSTRKGET*NLCELKTSPDISEF Trigger: AAACTCACTAATGTCTGGACTGGTTTTGAGCTCACAGAGATTCCATGTCTCTCCCTTCCTAGTGCTGTGATTAAAGGCAAGTGTCACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR CCA 90 bp | CAGCTATTTACACATGTGCTGCTTTGTGTGTGCCTATCTGAACAGTaGCTTCTGCAACACTCCCATCTGAAACCAAACTATCTCATTCTA | + |
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Preference number: 1 (lower is better) Translates to: QLFTHVLLCVCLSEQ*LLQHSHLKPNYLIL Trigger: TAGAATGAGATAGTTTGGTTTCAGATGGGAGTGTTGCAGAAGCCACTGTTCAGATAGGCACACACAAAGCAGCACATGTGTAAATAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR TCA 90 bp | TTTGTGTGTGCCTATCTGAACAGTGGCTTCTGCAACACTCCCATCTaGAACCAAACTATCTCATTCTACTTTTGGCAAGGTAGTACAAAC | + |
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Preference number: 1 (lower is better) Translates to: FVCAYLNSGFCNTPI*NQTISFYFWQGSTN Trigger: GTTTGTACTACCTTGCCAAAAGTAGAATGAGATAGTTTGGTTTCAGATGGGAGTGTTGCAGAAGCCACTGTTCAGATAGGCACACACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR CCA 90 bp | AACGTGATTAAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTaGAACCACCACAGAACGCACTACAAATGTCTGTGTGTCCGCTCA | + |
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Preference number: 1 (lower is better) Translates to: NVIKNMEMSFGISAL*NHHRTHYKCLCVRS Trigger: TGAGCGGACACACAGACATTTGTAGTGCGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTTAATCACGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR TCA 90 bp | ATAGTTGGAAAGTTCAGTTTTTCCTTCTTAAGAAGACAGCCAGTGTaGACATTATTCTTCTATTCCCCTGAGTTCAACATGATTGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: IVGKFSFSFLRRQPV*TLFFYSPEFNMIGQ Trigger: TTGCCCAATCATGTTGAACTCAGGGGAATAGAAGAATAATGTTCACACTGGCTGTCTTCTTAAGAAGGAAAAACTGAACTTTCCAACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR TCA 90 bp | TTCTTACGTTACTTCATTACTCATCTTCTGAAAAGCTACATCTTCTaGACATTACTTATCCTCAGTAGTAGAAAAGTATCTCTGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: FLRYFITHLLKSYIF*TLLILSSRKVSLPQ Trigger: CTGAGGCAGAGATACTTTTCTACTACTGAGGATAAGTAATGTTCAGAAGATGTAGCTTTTCAGAAGATGAGTAATGAAGTAACGTAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR TCA 90 bp | CCAATTCTATACTTCATTTCCTATATCTCATTCATCCTAACAACTTaGGGTAGACATGGTAACATTGTCCAAATTCTCAACACACCAGTT | + |
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Preference number: 1 (lower is better) Translates to: PILYFISYISFILTT*GRHGNIVQILNTPV Trigger: AACTGGTGTGTTGAGAATTTGGACAATGTTACCATGTCTACCTCAAGTTGTTAGGATGAATGAGATATAGGAAATGAAGTATAGAATTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR-3UTR TCA 90 bp | GTGACGCGGTCACCCCAGAAGCCAGCTGGCCTGAGCCCTGATCCCAGGTGTACTGCAAGCTCACTGAACTaGACTACAGGTGCAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: VTRSPQKPAGLSPDPRCTASSLN*TTGAAE Trigger: TTCTGCTGCACCTGTAGTTCAGTTCAGTGAGCTTGC...AGTACACCTGGGATCAGGGCTCAGGCCAGCTGGCTTCTGGGGTGACCGCGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
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| 3UTR-3UTR TCA 90 bp | GATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACTGGAGGAAGGAACCCTGGCCCTaGAATGTGTCCTCCAGATCA | + |
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Preference number: 2 (lower is better) Translates to: DEMQSNHMHSAMHSANWRKEPWP*NVSSRS Trigger: TGATCTGGAGGACACATTTCAGGGCCAGGGTTCCTT...CCTCCAGTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
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| 3UTR-3UTR TCA 90 bp | ACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTTCCGTGCTGTGCCCCTaGGCTTGCTCAGTGTGCGTC | + |
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Preference number: 2 (lower is better) Translates to: TTNVCVSAQPFQLYLAIASVLCP*ACSVCV Trigger: GACGCACACTGAGCAAGCTCAGGGGCACAGCACGGA...AGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR TCA 90 bp | GACCAAGATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACCAATTGAGAGAGCCCTaGCTCATAGGACAGGATAGG | + |
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Preference number: 2 (lower is better) Translates to: DQDEMQSNHMHSAMHSANQLREP*LIGQDR Trigger: CCTATCCTGTCCTATGAGTCAGGGCTCTCTCAATTG...GTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATCTTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
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| 3UTR-3UTR GCA 90 bp | GACCAAGATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACACAGGTGCAGCAGAATaGAGATCACAACCCACCTAC | + |
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Preference number: 2 (lower is better) Translates to: DQDEMQSNHMHSAMHSANTGAAE*RSQPTY Trigger: GTAGGTGGGTTGTGATCTGCATTCTGCTGCACCTGT...GTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATCTTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGAGCTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTGGATTACCCCTGAGTTCAACATaGTTGGGCAAAGCAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: AQSLNSSSSCFSFSVAGLPLSST*LGKAAP Trigger: TGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGG...TAATCCAGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR CAA 90 bp | CTGTATCTAGCAATTGCTGCTTATTTCCGTGCTGTGCCCCTGAGCTaGCTCAGTGTGCGTCTAGATGAATGTCAGTATGCTTCCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LYLAIAAYFRAVPLS*LSVRLDECQYASCF Trigger: GAAGCAGGAAGCATACTGACATTCATCTAGACGCACACTGAGCAAGCTCAGGGGCACAGCACGGAAATAAGCAGCAATTGCTAGATACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTTACAATTAGCAGCTGGACCCTGTGAAACATATAGGACAATGGAAGGCACTTGGAGTCACTTACACTaGTGGCCCCATAGGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: ALQLAAGPCETYRTMEGTWSHLH*WPHRSL Trigger: GAGAGACCTATGGGGCCATCAGTGTAAGTGACTCCA...AGTGCCTTCCATTGTCCTATATGTTTCACAGGGTCCAGCTGCTAATTGTAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR TCA 90 bp | CAAACAGTGGAATTTTTGCCCTTGCTTTCCCTTTGGCTTTGTAAACTGTATCACGCCTGGTCTACAGAGTaGGTTGCAGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QTVEFLPLLSLWLCKLYHAWSTE*VAGQPG Trigger: CCCTGGCTGTCCTGCAACTCACTCTGTAGACCAGGC...GTGATACAGTTTACAAAGCCAAAGGGAAAGCAAGGGCAAAAATTCCACTGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR-3UTR GCA 90 bp | GTAAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCCTGCAATGCCGGCACTaGAGTTTGGAGTCACTTACA | + |
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Preference number: 2 (lower is better) Translates to: VKERGEISSSIARTACASLQCRH*SLESLT Trigger: TGTAAGTGACTCCAAACTGCAGTGCCGGCATTGCAG...GGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATAGCCCAGAGCTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTAAGCCACCGTGTGGCTaGTCAGAAGGGCAGGTACTT | + |
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Preference number: 2 (lower is better) Translates to: FIAQSLNSSSSCFSFSVAKPPCG*SEGQVL Trigger: AAGTACCTGCCCTTCTGAGCAGCCACACGGTGGCTT...AGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGCTATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR-3UTR TCA 90 bp | CACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCCAGTGTGCGTCTAGATaGATGTCAGTATGCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: HYKCLCVRSAFPAVSSNCQCASR*MSVCFL Trigger: CAGGAAGCATACTGACATTCATCTAGACGCACACTG...GCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCCAGTGTGCGTCTAGATaGATGTCAGTATGCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: VKERGEISSSIARTACASQCASR*MSVCFL Trigger: CAGGAAGCATACTGACATTCATCTAGACGCACACTG...GGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR TCA 90 bp | AAGACATTCAAGCTACCTAGTGTATGCAGGCCAGTGAGTAAAAGAGAGAGGAGACCCCTGAGTTCAACATaGTTGGGCAAAGCAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: KTFKLPSVCRPVSKRERRPLSST*LGKAAP Trigger: TGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGG...TCTCCTCTCTCTTTTACTCACTGGCCTGCATACACTAGGTAGCTTGAATGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGAGCTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTGGATTAGGTATTTCAGCATTGTaGAACCACCACAGAACGCAC | + |
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Preference number: 2 (lower is better) Translates to: AQSLNSSSSCFSFSVAGLGISAL*NHHRTH Trigger: GTGCGTTCTGTGGTGGTTCCACAATGCTGAAATACC...TAATCCAGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR-3UTR CCA 90 bp | CAAACAGTGGAATTTTTGCCCTTGCTTTCCCTTTGGCTTTGTAAACTGTATCACTCTGAAGCCACCGTGTaGCTGCTCAGAAGGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: QTVEFLPLLSLWLCKLYHSEATV*LLRRAG Trigger: ACCTGCCCTTCTGAGCAGCCACACGGTGGCTTCAGA...GTGATACAGTTTACAAAGCCAAAGGGAAAGCAAGGGCAAAAATTCCACTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR-3UTR TCA 90 bp | AATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTTCCTCGGAGACACACCGGGCAAGTGATTACTTaGCATAATGCCTTTGAAATT | + |
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Preference number: 2 (lower is better) Translates to: NQLFHSQNCMCLLPRRHTGQVIT*HNAFEI Trigger: AATTTCAAAGGCATTATGTCAAGTAATCACTTGCCC...GGTGTGTCTCCGAGGAAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGTACACCACCGGCGTCTGGCTAGGATCTCATCATTTCACCTGTTTATAATATGTCAGTATGCTTCCTaGTTCACAGTCCTTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GVHHRRLARISSFHLFIICQYAS*FTVLSG Trigger: GCCAGAAAGGACTGTGAAGCAGGAAGCATACTGACA...TATTATAAACAGGTGAAATGATGAGATCCTAGCCAGACGCCGGTGGTGTACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR-3UTR GCA 90 bp | ACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTTGTCAGTATGCTTCCTaGTTCACAGTCCTTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: TTNVCVSAQPFQLYLAIACQYAS*FTVLSG Trigger: GCCAGAAAGGACTGTGAAGCAGGAAGCATACTGACA...AGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTACAATTAGCAGCTGGACCCTGTGAAACATATAGGACAATGGAAGGCACTTGTCAGTATGCTTCCTaGTTCACAGTCCTTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: ALQLAAGPCETYRTMEGTCQYAS*FTVLSG Trigger: GCCAGAAAGGACTGTGAAGCAGGAAGCATACTGACA...AGTGCCTTCCATTGTCCTATATGTTTCACAGGGTCCAGCTGCTAATTGTAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATAGCCCAGAGCTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTCTGCAATGCCGGCACTaGAGTTTGGAGTCACTTACA | + |
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Preference number: 2 (lower is better) Translates to: FIAQSLNSSSSCFSFSVALQCRH*SLESLT Trigger: TGTAAGTGACTCCAAACTGCAGTGCCGGCATTGCAG...AGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGCTATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR-3UTR CCA 90 bp | CACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCCTTCACAGTCCTTTCTaGCTGGAAAACCTGACAAGT | + |
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Preference number: 2 (lower is better) Translates to: HYKCLCVRSAFPAVSSNCLHSPF*LENLTS Trigger: ACTTGTCAGGTTTTCCAGCCAGAAAGGACTGTGAAG...GCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCCTTCACAGTCCTTTCTaGCTGGAAAACCTGACAAGT | + |
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Preference number: 2 (lower is better) Translates to: VKERGEISSSIARTACASLHSPF*LENLTS Trigger: ACTTGTCAGGTTTTCCAGCCAGAAAGGACTGTGAAG...GGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR TCA 90 bp | AAGACATTCAAGCTACCTAGTGTATGCAGGCCAGTGAGTAAAAGAGAGAGGAGACAGTGTGCGTCTAGATaGATGTCAGTATGCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: KTFKLPSVCRPVSKRERRQCASR*MSVCFL Trigger: CAGGAAGCATACTGACATTCATCTAGACGCACACTG...TCTCCTCTCTCTTTTACTCACTGGCCTGCATACACTAGGTAGCTTGAATGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGAGCTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTGGATTAGTGCATGAGGCTCTCTaGTCAAATTCAAGTATTGCA | + |
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Preference number: 2 (lower is better) Translates to: AQSLNSSSSCFSFSVAGLVHEAL*SNSSIA Trigger: TGCAATACTTGAATTTGATCAGAGAGCCTCATGCAC...TAATCCAGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR-3UTR TCA 90 bp | TTTATAGCCCAGAGCTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTCTTGCCTACTGTGCATaGGGCTCTCTGATCAAATTC | + |
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Preference number: 2 (lower is better) Translates to: FIAQSLNSSSSCFSFSVALAYCA*GSLIKF Trigger: GAATTTGATCAGAGAGCCTCATGCACAGTAGGCAAG...AGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGCTATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGTTTCCCAGATATGATACTCCCACTGCAGGTGGTTTCATGCTACTAATGGAACTGAACTACAGGTaGAGCAGAATGCAGATCACA | + |
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Preference number: 2 (lower is better) Translates to: CLFPRYDTPTAGGFMLLMELNYR*SRMQIT Trigger: TGTGATCTGCATTCTGCTGCACCTGTAGTTCAGTTC...CATTAGTAGCATGAAACCACCTGCAGTGGGAGTATCATATCTGGGAAACAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
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| 3UTR-3UTR TCA 90 bp | ATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGAACGCACTCAGTGTGCGTCTAGATaGATGTCAGTATGCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: IWKCLSVFQHCGTTTERTQCASR*MSVCFL Trigger: CAGGAAGCATACTGACATTCATCTAGACGCACACTG...AGTGCGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGAAACATATAGGACAATGGAAGGCACTACATAAGCCTCAGTTATATCTATGGAGTCACTTACACTaGTGGCCCCATAGGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: PVKHIGQWKALHKPQLYLWSHLH*WPHRSL Trigger: GAGAGACCTATGGGGCCATCAGTGTAAGTGACTCCA...TAGATATAACTGAGGCTTATGTAGTGCCTTCCATTGTCCTATATGTTTCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTTACAATTAGCAGCTGGACCCTGTGAAACATATAGGACAATGGAAGGCACTATTCTTCTATTCCCCTaGGTTCAACATGATTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: ALQLAAGPCETYRTMEGTILLFP*VQHDWA Trigger: TGCCCAATCATGTTGAACTCAGGGGAATAGAAGAAT...AGTGCCTTCCATTGTCCTATATGTTTCACAGGGTCCAGCTGCTAATTGTAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGAGCTCAAAACCAGTCCAGACATTAGTGAGTTTCAGAATGTTGAGAGCTACGTGTATGCAGGCCAGTaGGTAAAAGAGAGAGGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CELKTSPDISEFQNVESYVYAGQ*VKERGE Trigger: TTCTCCTCTCTCTTTTACTCACTGGCCTGCATACAC...GTAGCTCTCAACATTCTGAAACTCACTAATGTCTGGACTGGTTTTGAGCTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR CAA 90 bp | AGCACCTGGCTCTTTCTAATAGCATCTAACTTTATAGCCCAGAGCTaGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTGGATTA | + |
|
Preference number: 2 (lower is better) Translates to: STWLFLIASNFIAQS*NSSSSCFSFSVAGL Trigger: TAATCCAGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGCTATAAAGTTAGATGCTATTAGAAAGAGCCAGGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTACACTTCATTTCACTTCACTGTCTCTGCCTTCTGAGCACTGGGATTAAACTTCACAGTCCTTTCTaGCTGGAAAACCTGACAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SVHFISLHCLCLLSTGIKLHSPF*LENLTS Trigger: ACTTGTCAGGTTTTCCAGCCAGAAAGGACTGTGAAG...TTTAATCCCAGTGCTCAGAAGGCAGAGACAGTGAAGTGAAATGAAGTGTACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR-3UTR CCA 90 bp | ATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGAACGCACTCTTCACAGTCCTTTCTaGCTGGAAAACCTGACAAGT | + |
|
Preference number: 2 (lower is better) Translates to: IWKCLSVFQHCGTTTERTLHSPF*LENLTS Trigger: ACTTGTCAGGTTTTCCAGCCAGAAAGGACTGTGAAG...AGTGCGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGAGCTCAAAACCAGTCCAGACATTAGTGAGTTTCAGAATGTTGAGAGCTACTGCAACACTCCCATCTaGAACCAAACTATCTCATTC | + |
|
Preference number: 2 (lower is better) Translates to: CELKTSPDISEFQNVESYCNTPI*NQTISF Trigger: GAATGAGATAGTTTGGTTTCAGATGGGAGTGTTGCA...GTAGCTCTCAACATTCTGAAACTCACTAATGTCTGGACTGGTTTTGAGCTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTGTGAAACATATAGGACAATGGAAGGCACTACATAAGCCTCAGTTATATCTATGTCAGTATGCTTCCTaGTTCACAGTCCTTTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: PVKHIGQWKALHKPQLYLCQYAS*FTVLSG Trigger: GCCAGAAAGGACTGTGAAGCAGGAAGCATACTGACA...TAGATATAACTGAGGCTTATGTAGTGCCTTCCATTGTCCTATATGTTTCACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAACAGTGGAATTTTTGCCCTTGCTTTCCCTTTGGCTTTGTAAACTGTATCACATTCTTCTATTCCCCTaGGTTCAACATGATTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: QTVEFLPLLSLWLCKLYHILLFP*VQHDWA Trigger: TGCCCAATCATGTTGAACTCAGGGGAATAGAAGAAT...GTGATACAGTTTACAAAGCCAAAGGGAAAGCAAGGGCAAAAATTCCACTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTATAGCCCAGAGCTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTGTTTTCACCATGTGTTaGGTTTCTGTTATATGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: FIAQSLNSSSSCFSFSVAVFTMC*VSVICG Trigger: ACCACATATAACAGAAACTCAACACATGGTGAAAAC...AGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGCTATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR-3UTR GCA 90 bp | ACATTATTCTTCTATTCCCCTGAGTTCAACATGATTGGGCAAAGCAGCACCAATGCTGTATCTAGCAATTaGTGCTTATTTCCGTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TLFFYSPEFNMIGQSSTNAVSSN*CLFPCC Trigger: ACAGCACGGAAATAAGCAGCAATTGCTAGATACAGC...ATTGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGGAATAGAAGAATAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR-3UTR CCA 90 bp | CACACACGTAGCTCAAGTTGTAAGGGAAATGGAATTAGGATAGTAACCTATTTCTCTCTCTCCAGCACCTaGCTCTTTCTAATAGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: HTRSSSCKGNGIRIVTYFSLSST*LFLIAS Trigger: AGATGCTATTAGAAAGAGCCAGGTGCTGGAGAGAGA...GAAATAGGTTACTATCCTAATTCCATTTCCCTTACAACTTGAGCTACGTGTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGATTAAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACGTATCTAGCAATTGCTaGTTATTTCCGTGCTGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: VIKNMEMSFGISALWNHHVSSNC*LFPCCA Trigger: GGCACAGCACGGAAATAAGCAGCAATTGCTAGATAC...GTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTTAATCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGATTAAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACGCTGTATCTAGCAATTaGTGCTTATTTCCGTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: VIKNMEMSFGISALWNHHAVSSN*CLFPCC Trigger: ACAGCACGGAAATAAGCAGCAATTGCTAGATACAGC...GTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTTAATCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTTCCTCGGAGACACACCGCTGTGCCCCTGAGCTaGCTCAGTGTGCGTCTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NQLFHSQNCMCLLPRRHTAVPLS*LSVRLD Trigger: ATCTAGACGCACACTGAGCAAGCTCAGGGGCACAGC...GGTGTGTCTCCGAGGAAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR TCA 72 bp | CTAGATGCATGGATCCTTGGGCTCAGGCCTCAGCACTaGACTAGGCATGGTGGAACAGGCCAGCAATCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LDAWILGLRPQH*TRHGGTGQQSP Trigger: TGGAGATTGCTGGCCTGTTCCACCATGCCTAGTTCAGTGCTGAGGCCTGAGCCCAAGGATCCATGCATCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR TCA 72 bp | CCTTGTACCCGCATGAGGGAAAAGGAACCCTGGCCCTaGAATGTGTCCTCCAGATCATACTCACACTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PCTRMREKEPWP*NVSSRSYSHCS Trigger: GCTGCAGTGTGAGTATGATCTGGAGGACACATTTCAGGGCCAGGGTTCCTTTTCCCTCATGCGGGTACAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| 3UTR TCA 72 bp | AGCATGGGGGTGCAGACTGAGGCAAGCTCACTGAACTaGACTACAGGTGCAGCAGAATGCAGATCACAACCC | + |
|
Preference number: 3 (lower is better) Translates to: SMGVQTEASSLN*TTGAAECRSQP Trigger: GGGTTGTGATCTGCATTCTGCTGCACCTGTAGTTCAGTTCAGTGAGCTTGCCTCAGTCTGCACCCCCATGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| 3UTR TCA 72 bp | TTCACAGCATGGGGGTGCAGACTGAGGCAAGCTCACTaGACTGAACTACAGGTGCAGCAGAATGCAGATCAC | + |
|
Preference number: 3 (lower is better) Translates to: FTAWGCRLRQAH*TELQVQQNADH Trigger: GTGATCTGCATTCTGCTGCACCTGTAGTTCAGTTCAGTGAGCTTGCCTCAGTCTGCACCCCCATGCTGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| 3UTR GCA 72 bp | TGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTaGTGCTTATTTCCGTGCTGTGCCCCTGAGCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CVRSAFPAVSSN*CLFPCCAPELA Trigger: AGCAAGCTCAGGGGCACAGCACGGAAATAAGCAGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCGCTGTGCCCCTGAGCTaGCTCAGTGTGCGTCTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VKERGEISSSIARTACASAVPLS*LSVRLD Trigger: ATCTAGACGCACACTGAGCAAGCTCAGGGGCACAGC...GGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTACACCACCGGCGTCTGGCTAGGATCTCATCATTTCACCTGTTTATAATAGCTGTGCCCCTGAGCTaGCTCAGTGTGCGTCTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GVHHRRLARISSFHLFIIAVPLS*LSVRLD Trigger: ATCTAGACGCACACTGAGCAAGCTCAGGGGCACAGC...TATTATAAACAGGTGAAATGATGAGATCCTAGCCAGACGCCGGTGGTGTACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTGCTGTGCCCCTGAGCTaGCTCAGTGTGCGTCTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: TTNVCVSAQPFQLYLAIAAVPLS*LSVRLD Trigger: ATCTAGACGCACACTGAGCAAGCTCAGGGGCACAGC...AGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR TCA 72 bp | CAGTACACTTCATTTCACTTCACTGTCTCTGCCTTCTaGGCACTGGGATTAAAGGTGTACACCACCGGCGTC | + |
|
Preference number: 3 (lower is better) Translates to: QYTSFHFTVSAF*ALGLKVYTTGV Trigger: GACGCCGGTGGTGTACACCTTTAATCCCAGTGCTCAGAAGGCAGAGACAGTGAAGTGAAATGAAGTGTACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR TCA 72 bp | ATACAAGTGCCCATCCATCCATTATGCTGGGCATGGTaGCACTTGCCTTTAATCACAGCACTAGGAAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: IQVPIHPLCWAW*HLPLITALGRE Trigger: CTCCCTTCCTAGTGCTGTGATTAAAGGCAAGTGTCACCATGCCCAGCATAATGGATGGATGGGCACTTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR TCA 72 bp | CACTGCAGGTGGTTTCATGCTACTAATGGAGGTCCCTaGGCACACAATTGGAAAGAGATGTGCACAGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: HCRWFHATNGGP*AHNWKEMCTAS Trigger: ACTAGCTGTGCACATCTCTTTCCAATTGTGTGCTCAGGGACCTCCATTAGTAGCATGAAACCACCTGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| 3UTR TCA 72 bp | TGTACAGTCTCTACAAGTGTCCTGTGTCGTAGGCTGTaGGACCAAGATGAAATGCAGTCCAACCACATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CTVSTSVLCRRL*DQDEMQSNHMH Trigger: GTGCATGTGGTTGGACTGCATTTCATCTTGGTCTCACAGCCTACGACACAGGACACTTGTAGAGACTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| 3UTR GCA 72 bp | AGCCCTGATCCCAGGTGTACTCAACCCTTTCATATTTaGCTGTTTCCCAGATATGATACTCCCACTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SPDPRCTQPFHI*LFPRYDTPTAG Trigger: ACCTGCAGTGGGAGTATCATATCTGGGAAACAGGCAAATATGAAAGGGTTGAGTACACCTGGGATCAGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTTCGGTATTTCAGCATaGTGGAACCACCACAGAACG | + |
|
Preference number: 3 (lower is better) Translates to: VKERGEISSSIARTACASFGISA*WNHHRT Trigger: CGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAA...GGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR TCA 72 bp | CTTGAAAATAACAGCAAAAGAATAAGAGATGGCTTCTaGAGCCACCGTGTGGCTGCTCAGAAGGGCAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LENNSKRIRDGF*SHRVAAQKGRY Trigger: GTACCTGCCCTTCTGAGCAGCCACACGGTGGCTTCAGAAGCCATCTCTTATTCTTTTGCTGTTATTTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR GCA 72 bp | GGCAGGTACTTAAGTCACAGCTATTTACACATGTGCTaGTTTGTGTGTGCCTATCTGAACAGTGGCTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GRYLSHSYLHMC*FVCAYLNSGFC Trigger: GCAGAAGCCACTGTTCAGATAGGCACACACAAAGCAGCACATGTGTAAATAGCTGTGACTTAAGTACCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR GCA 72 bp | AAGAATAAGAGATGGCTTCTGAAGCCACCGTGTGGCTaGTCAGAAGGGCAGGTACTTAAGTCACAGCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: KNKRWLLKPPCG*SEGQVLKSQLF Trigger: AAATAGCTGTGACTTAAGTACCTGCCCTTCTGAGCAGCCACACGGTGGCTTCAGAAGCCATCTCTTATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR CCA 72 bp | GAAAAGCAGACGTTCAAGATCATCCATGGCTACACATaGAGTGTGAAGCCAGTCCAGGATACACGAAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EKQTFKIIHGYT*SVKPVQDTRKL Trigger: AAGCTTTCGTGTATCCTGGACTGGCTTCACACTCCATGTGTAGCCATGGATGATCTTGAACGTCTGCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR-3UTR CAA 90 bp | ACATTATTCTTCTATTCCCCTGAGTTCAACATGATTGGGCAAAGCAGCACCAATTGCCGGCACTGCAGTTaGGAGTCACTTACACTGATG | + |
|
Preference number: 3 (lower is better) Translates to: TLFFYSPEFNMIGQSSTNCRHCS*ESLTLM Trigger: CATCAGTGTAAGTGACTCCAAACTGCAGTGCCGGCA...ATTGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGGAATAGAAGAATAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR CCA 72 bp | AAGTCCTCTCACCCACTGAATTCTCTCTCCAGCACCTaGCTCTTTCTAATAGCATCTAACTTTATAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KSSHPLNSLSST*LFLIASNFIAQ Trigger: CTGGGCTATAAAGTTAGATGCTATTAGAAAGAGCCAGGTGCTGGAGAGAGAATTCAGTGGGTGAGAGGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTATAGCCCAGAGCTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTGTGGAATTTTTGCCCTaGCTTTCCCTTTGGCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: FIAQSLNSSSSCFSFSVAVEFLP*LSLWLC Trigger: ACAAAGCCAAAGGGAAAGCAAGGGCAAAAATTCCAC...AGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGCTATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR TCA 72 bp | GCCTATCTGAACAGTGGCTTCTGCAACACTCCCATCTaGAACCAAACTATCTCATTCTACTTTTGGCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: AYLNSGFCNTPI*NQTISFYFWQG Trigger: ACCTTGCCAAAAGTAGAATGAGATAGTTTGGTTTCAGATGGGAGTGTTGCAGAAGCCACTGTTCAGATAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR GCA 72 bp | CTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTaGTGGATTACACACCTATCTCTAACCAATCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LELKFLLLQLLS*WITHLSLTNPS Trigger: AGAAGGATTGGTTAGAGATAGGTGTGTAATCCAGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR GCA 72 bp | AACTTTATAGCCCAGAGCTTGAACTCAAGTTCCTCTTaGTTCAGCTTCTCAGTTGCTGGATTACACACCTAT | + |
|
Preference number: 3 (lower is better) Translates to: NFIAQSLNSSSS*FSFSVAGLHTY Trigger: ATAGGTGTGTAATCCAGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGCTATAAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR TCA 72 bp | TACTCAACCCTTTCATATTTGCCTGTTTCCCAGATATaGTACTCCCACTGCAGGTGGTTTCATGCTACTAAT | + |
|
Preference number: 3 (lower is better) Translates to: YSTLSYLPVSQI*YSHCRWFHATN Trigger: ATTAGTAGCATGAAACCACCTGCAGTGGGAGTATCATATCTGGGAAACAGGCAAATATGAAAGGGTTGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| 3UTR CCA 72 bp | GAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTaGATTACACACCTATCTCTAACCAATCCTTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ELKFLLLQLLSC*ITHLSLTNPSF Trigger: AAAAGAAGGATTGGTTAGAGATAGGTGTGTAATCCAGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAACAGTGGAATTTTTGCCCTTGCTTTCCCTTTGGCTTTGTAAACTGTATCACCTCAAAGTTGATTTTTaGTGCACCCATACAAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QTVEFLPLLSLWLCKLYHLKVDF*CTHTSA Trigger: GGCACTTGTATGGGTGCACAAAAAATCAACTTTGAG...GTGATACAGTTTACAAAGCCAAAGGGAAAGCAAGGGCAAAAATTCCACTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR CCA 72 bp | AAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTaGAACCACCACAGAACGCACTACAAATGTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KNMEMSFGISAL*NHHRTHYKCLC Trigger: ACACAGACATTTGTAGTGCGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR TCA 72 bp | TATTATACAGATAAGGTTATTCAGGATCAGAGAGATTaGACCACACACGTAGCTCAAGTTGTAAGGGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: YYTDKVIQDQRD*TTHVAQVVREM Trigger: CATTTCCCTTACAACTTGAGCTACGTGTGTGGTTCAATCTCTCTGATCCTGAATAACCTTATCTGTATAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR TCA 72 bp | AGTGGTTATGAAGGATTACAAAGACAGACATTGCACTaGACATACAGTATTCCATTGAATCCTCTTACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SGYEGLQRQTLH*TYSIPLNPLTL Trigger: CAAAGTAAGAGGATTCAATGGAATACTGTATGTTCAGTGCAATGTCTGTCTTTGTAATCCTTCATAACCACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR TCA 72 bp | AAACATGAGGGGCAACAAGAAATACTTTTGGGCAAGTaGTTACTTGACATAATGCCTTTGAAATTATGTATC | + |
|
Preference number: 3 (lower is better) Translates to: KHEGQQEILLGK*LLDIMPLKLCI Trigger: GATACATAATTTCAAAGGCATTATGTCAAGTAATCACTTGCCCAAAAGTATTTCTTGTTGCCCCTCATGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR TCA 72 bp | TACTTCATTTCCTATATCTCATTCATCCTAACAACTTaGGGTAGACATGGTAACATTGTCCAAATTCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: YFISYISFILTT*GRHGNIVQILN Trigger: GTTGAGAATTTGGACAATGTTACCATGTCTACCTCAAGTTGTTAGGATGAATGAGATATAGGAAATGAAGTA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCGGTGACGCGGTCACCCCAGAAGCCAGCTGGCCTGAGCCCTGATCCCAGGCCCATGATAGGCAGGTaGAGCGTTTTCCCTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: EAVTRSPQKPAGLSPDPRPMIGR*SVFPGT Trigger: AGTGCCAGGGAAAACGCTGCACCTGCCTATCATGGG...CCTGGGATCAGGGCTCAGGCCAGCTGGCTTCTGGGGTGACCGCGTCACCGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR TCA 90 bp | GAGGCGGTGACGCGGTCACCCCAGAAGCCAGCTGGCCTGAGCCCTGATCCCAGGCACTATCATGAATCGTaGAGTAAGGCCGAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: EAVTRSPQKPAGLSPDPRHYHES*SKAENH Trigger: GTGATTTTCGGCCTTACTTCACGATTCATGATAGTG...CCTGGGATCAGGGCTCAGGCCAGCTGGCTTCTGGGGTGACCGCGTCACCGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR GCA 90 bp | GAGGCGGTGACGCGGTCACCCCAGAAGCCAGCTGGCCTGAGCCCTGATCCCAGGCTTAGGAATTTCACCTaGAGGTTTAAGATCTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: EAVTRSPQKPAGLSPDPRLRNFT*RFKISY Trigger: ATAGGAGATCTTAAACCTGCAGGTGAAATTCCTAAG...CCTGGGATCAGGGCTCAGGCCAGCTGGCTTCTGGGGTGACCGCGTCACCGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR GCA 90 bp | AATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTTCCTCGGAGACACACCCCCATGATAGGCAGGTaGAGCGTTTTCCCTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NQLFHSQNCMCLLPRRHTPMIGR*SVFPGT Trigger: AGTGCCAGGGAAAACGCTGCACCTGCCTATCATGGG...GGTGTGTCTCCGAGGAAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCAATGCCGGCACTGCAGTTTGGAGTCACTTACACTGATGGCCCCATAGGTACTGCACCATCTGCGTaGTCCCAGGCTTGTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAMPALQFGVTYTDGPIGTAPSA*SQACHD Trigger: GTCATGACAAGCCTGGGACCACGCAGATGGTGCAGT...ACCTATGGGGCCATCAGTGTAAGTGACTCCAAACTGCAGTGCCGGCATTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTGTTTCCCAGATATGATACTCCCACTGCAGGTGGTTTCATGCTACTAATGATCACCTCCACCGCCTaGCCCAGCTCCAGGTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLFPRYDTPTAGGFMLLMITSTA*PSSRSK Trigger: CTTCGACCTGGAGCTGGGCCAGGCGGTGGAGGTGAT...CATTAGTAGCATGAAACCACCTGCAGTGGGAGTATCATATCTGGGAAACAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR TCA 90 bp | AATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTTCCTCGGAGACACACCCTTTCCGCCGGGTCTTaGACCAGCCATCAAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: NQLFHSQNCMCLLPRRHTLSAGS*TSHQNL Trigger: CAAATTTTGATGGCTGGTTCAAGACCCGGCGGAAAG...GGTGTGTCTCCGAGGAAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR CCA 90 bp | AAGACATTCAAGCTACCTAGTGTATGCAGGCCAGTGAGTAAAAGAGAGAGGAGAATCACCTCCACCGCCTaGCCCAGCTCCAGGTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KTFKLPSVCRPVSKRERRITSTA*PSSRSK Trigger: CTTCGACCTGGAGCTGGGCCAGGCGGTGGAGGTGAT...TCTCCTCTCTCTTTTACTCACTGGCCTGCATACACTAGGTAGCTTGAATGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR CCA 90 bp | GGAACCCTGGCCCTGAAATGTGTCCTCCAGATCATACTCACACTGCAGCATGCACGGAGAATAACACTTTaGGCCTCAGAAGGACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTLALKCVLQIILTLQHARRITL*ASEGRF Trigger: GAAGCGTCCTTCTGAGGCCCAAAGTGTTATTCTCCG...TGCATGCTGCAGTGTGAGTATGATCTGGAGGACACATTTCAGGGCCAGGGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR CCA 90 bp | TCTGCAATGCCGGCACTGCAGTTTGGAGTCACTTACACTGATGGCCCCATAGGTCGGAGAATAACACTTTaGGCCTCAGAAGGACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAMPALQFGVTYTDGPIGRRITL*ASEGRF Trigger: GAAGCGTCCTTCTGAGGCCCAAAGTGTTATTCTCCG...ACCTATGGGGCCATCAGTGTAAGTGACTCCAAACTGCAGTGCCGGCATTGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAGATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACTACTGAGGGCGGAGCTTaGGTACGGGTAGTATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TKMKCSPTTCTVPCTAPTTEGGA*VRVVYS Trigger: AGAATATACTACCCGTACTCAAGCTCCGCCCTCAGT...AGTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR TCA 90 bp | ACCAAGATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACTCTTTCCGCCGGGTCTTaGACCAGCCATCAAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKMKCSPTTCTVPCTAPTLSAGS*TSHQNL Trigger: CAAATTTTGATGGCTGGTTCAAGACCCGGCGGAAAG...AGTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATCTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR GCA 90 bp | TCTGCAATGCCGGCACTGCAGTTTGGAGTCACTTACACTGATGGCCCCATAGGTCTCTCTCGGCCAGCCTaGAACAACTTATTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAMPALQFGVTYTDGPIGLSRPA*NNLFFS Trigger: GCTGAAAAATAAGTTGTTGCAGGCTGGCCGAGAGAG...ACCTATGGGGCCATCAGTGTAAGTGACTCCAAACTGCAGTGCCGGCATTGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAGCTCAAAACCAGTCCAGACATTAGTGAGTTTCAGAATGTTGAGAGCTACGTGCAGCGTTTTCCCTaGCACTGGGGCAGGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: CELKTSPDISEFQNVESYVQRFP*HWGRPS Trigger: CGATGGCCTGCCCCAGTGCCAGGGAAAACGCTGCAC...GTAGCTCTCAACATTCTGAAACTCACTAATGTCTGGACTGGTTTTGAGCTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR TCA 90 bp | GACCAAGATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACGTAAGTTTGGAATGCTaGGGATATATCACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DQDEMQSNHMHSAMHSANVSLEC*GYITST Trigger: GGTGGAGGTGATATATCCTCAGCATTCCAAACTTAC...GTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATCTTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR TCA 90 bp | TTTATAGCCCAGAGCTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTGTCCCAGGCTTGTCATaGCACGTGGGAATCCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: FIAQSLNSSSSCFSFSVAVPGLS*HVGIRT Trigger: GGTTCGGATTCCCACGTGTCATGACAAGCCTGGGAC...AGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGCTATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR TCA 90 bp | GTAAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTGGTTACTCCTAAGATaGCTGAGGGCGGAGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VKERGEISSSIARTACASWLLLR*LRAELE Trigger: CTCAAGCTCCGCCCTCAGTCATCTTAGGAGTAACCA...GGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | CACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTGGTTACTCCTAAGATaGCTGAGGGCGGAGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HYKCLCVRSAFPAVSSNCWLLLR*LRAELE Trigger: CTCAAGCTCCGCCCTCAGTCATCTTAGGAGTAACCA...GCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTACTCAACCCTTTCATATTTGCCTGTTTCCCAGATATGATACTCCCACTCGTTTTCCCTGGCACTaGGGCAGGCCATCGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RCTQPFHICLFPRYDTPTRFPWH*GRPSVN Trigger: GTTGACCGATGGCCTGCCCCAGTGCCAGGGAAAACG...AGTGGGAGTATCATATCTGGGAAACAGGCAAATATGAAAGGGTTGAGTACACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR CCA 90 bp | AATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTTCCTCGGAGACACACCGCTTGTCATGACACGTaGGAATCCGAACCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: NQLFHSQNCMCLLPRRHTACHDT*ESEPSL Trigger: TAATGAAGGTTCGGATTCCCACGTGTCATGACAAGC...GGTGTGTCTCCGAGGAAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CCA 90 bp | AATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTGCTTATACTGCACCATCTGCGTaGTCCCAGGCTTGTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NVCVSAQPFQLYLAIAAYTAPSA*SQACHD Trigger: GTCATGACAAGCCTGGGACCACGCAGATGGTGCAGT...ATAAGCAGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR CAA 72 bp | GCAATTGCTGCTTATTTCCGTGCTGTGCCCCTGAGCTaGCTCAGTGTGCGTCTAGATGAATGTCAGTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: AIAAYFRAVPLS*LSVRLDECQYA Trigger: AGCATACTGACATTCATCTAGACGCACACTGAGCAAGCTCAGGGGCACAGCACGGAAATAAGCAGCAATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCAATGCCGGCACTGCAGTTTGGAGTCACTTACACTGATGGCCCCATAGGTCACTATCATGAATCGTaGAGTAAGGCCGAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SAMPALQFGVTYTDGPIGHYHES*SKAENH Trigger: GTGATTTTCGGCCTTACTTCACGATTCATGATAGTG...ACCTATGGGGCCATCAGTGTAAGTGACTCCAAACTGCAGTGCCGGCATTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | ACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTGCTACTGAGGGCGGAGCTTaGGTACGGGTAGTATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TNVCVSAQPFQLYLAIAATEGGA*VRVVYS Trigger: AGAATATACTACCCGTACTCAAGCTCCGCCCTCAGT...AGCAGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | AATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTGCTTATTGGTTACTCCTAAGATaGCTGAGGGCGGAGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NVCVSAQPFQLYLAIAAYWLLLR*LRAELE Trigger: CTCAAGCTCCGCCCTCAGTCATCTTAGGAGTAACCA...ATAAGCAGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | ACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTATGTCATGCCGGTCTTaGGCAGTATGCCTTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTNVCVSAQPFQLYLAIAMSCRS*AVCLAG Trigger: ACCTGCAAGGCATACTGCTCAAGACCGGCATGACAT...AGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCAATGCCGGCACTGCAGTTTGGAGTCACTTACACTGATGGCCCCATAGGTGGAGAAATACTTTTCTaGAAAGGCATCAAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAMPALQFGVTYTDGPIGGEILF*KGIKLA Trigger: GGCAAGCTTGATGCCTTTGCAGAAAAGTATTTCTCC...ACCTATGGGGCCATCAGTGTAAGTGACTCCAAACTGCAGTGCCGGCATTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR GCA 90 bp | ACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTTTGAGCAGTATGCCTTaGAGGTCGTCTGGTAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTNVCVSAQPFQLYLAIALSSMP*RSSGKA Trigger: GGCCTTACCAGACGACCTGCAAGGCATACTGCTCAA...AGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CCA 90 bp | ACATTATTCTTCTATTCCCCTGAGTTCAACATGATTGGGCAAAGCAGCACCAATCGTTTTCCCTGGCACTaGGGCAGGCCATCGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLFFYSPEFNMIGQSSTNRFPWH*GRPSVN Trigger: GTTGACCGATGGCCTGCCCCAGTGCCAGGGAAAACG...ATTGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGGAATAGAAGAATAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR CCA 90 bp | GATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACTGGAGGACTGTGAAGAAAAACTaGGCAGAAACACCTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DEMQSNHMHSAMHSANWRTVKKN*AETPEK Trigger: CTTTTCAGGTGTTTCTGCCCAGTTTTTCTTCACAGT...CCTCCAGTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR CCA 90 bp | CACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCCGGAGAATAACACTTTaGGCCTCAGAAGGACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HYKCLCVRSAFPAVSSNCRRITL*ASEGRF Trigger: GAAGCGTCCTTCTGAGGCCCAAAGTGTTATTCTCCG...GCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTACAATTAGCAGCTGGACCCTGTGAAACATATAGGACAATGGAAGGCACTCTGGGCAGAAACACCTaGAAAGATCCACCTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALQLAAGPCETYRTMEGTLGRNT*KDPPRE Trigger: TTCACGAGGTGGATCTTTTCAGGTGTTTCTGCCCAG...AGTGCCTTCCATTGTCCTATATGTTTCACAGGGTCCAGCTGCTAATTGTAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | AATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTGCTTATACTGAGGGCGGAGCTTaGGTACGGGTAGTATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVCVSAQPFQLYLAIAAYTEGGA*VRVVYS Trigger: AGAATATACTACCCGTACTCAAGCTCCGCCCTCAGT...ATAAGCAGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | GGTGTACTCAACCCTTTCATATTTGCCTGTTTCCCAGATATGATACTCCCACTGTGGTTACTCCTAAGATaGCTGAGGGCGGAGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVLNPFIFACFPDMILPLWLLLR*LRAELE Trigger: CTCAAGCTCCGCCCTCAGTCATCTTAGGAGTAACCA...CAGTGGGAGTATCATATCTGGGAAACAGGCAAATATGAAAGGGTTGAGTACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR TCA 90 bp | AATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTTCCTCGGAGACACACCTGCTGTATACCCTTCTaGAGTTGTTTTATGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQLFHSQNCMCLLPRRHTCCIPF*SCFMIS Trigger: GGAGATCATAAAACAACTTCAGAAGGGTATACAGCA...GGTGTGTCTCCGAGGAAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTTCTTTCCGCCGGGTCTTaGACCAGCCATCAAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRERRNQLFHSQNCMCLLLSAGS*TSHQNL Trigger: CAAATTTTGATGGCTGGTTCAAGACCCGGCGGAAAG...AAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR GCA 90 bp | GATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACTGGAGGATAATGTGTGGCCAGTaGTGTAGTGTTTTAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DEMQSNHMHSAMHSANWRIMCGQ*CSVLAK Trigger: TTTTGCTAAAACACTACAGCACTGGCCACACATTAT...CCTCCAGTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR CCA 90 bp | AATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTTCCTCGGAGACACACCACTGTGAAGAAAAACTaGGCAGAAACACCTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NQLFHSQNCMCLLPRRHTTVKKN*AETPEK Trigger: CTTTTCAGGTGTTTCTGCCCAGTTTTTCTTCACAGT...GGTGTGTCTCCGAGGAAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTGTTTCCCAGATATGATACTCCCACTGCAGGTGGTTTCATGCTACTAATGAGTGCCTCCAATTTTTaGGTCATTTCTTTCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CLFPRYDTPTAGGFMLLMSASNF*VISFRR Trigger: CCGGCGGAAAGAAATGACTCAAAAATTGGAGGCACT...CATTAGTAGCATGAAACCACCTGCAGTGGGAGTATCATATCTGGGAAACAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR TCA 90 bp | ATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGAACGCACTATGTCATGCCGGTCTTaGGCAGTATGCCTTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IWKCLSVFQHCGTTTERTMSCRS*AVCLAG Trigger: ACCTGCAAGGCATACTGCTCAAGACCGGCATGACAT...AGTGCGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR GCA 90 bp | GACCAAGATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACTTCAAAATACTCTGGTaGTATCTGTTTGAGTACGGT | + |
|
Preference number: 4 (lower is better) Translates to: DQDEMQSNHMHSAMHSANFKILW*YLFEYG Trigger: ACCGTACTCAAACAGATAGCACCAGAGTATTTTGAA...GTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATCTTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCTCAAAACCAGTCCAGACATTAGTGAGTTTCAGAATGTTGAGAGCTACGTTAACTGCACCATCTaGGTGGTCCCAGGCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CELKTSPDISEFQNVESYVNCTI*VVPGLS Trigger: TGACAAGCCTGGGACCACGCAGATGGTGCAGTTAAC...GTAGCTCTCAACATTCTGAAACTCACTAATGTCTGGACTGGTTTTGAGCTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR GCA 90 bp | TCTGCAATGCCGGCACTGCAGTTTGGAGTCACTTACACTGATGGCCCCATAGGTATAATGTGTGGCCAGTaGTGTAGTGTTTTAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAMPALQFGVTYTDGPIGIMCGQ*CSVLAK Trigger: TTTTGCTAAAACACTACAGCACTGGCCACACATTAT...ACCTATGGGGCCATCAGTGTAAGTGACTCCAAACTGCAGTGCCGGCATTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR GCA 90 bp | AATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTTCCTCGGAGACACACCCTTAGGAATTTCACCTaGAGGTTTAAGATCTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: NQLFHSQNCMCLLPRRHTLRNFT*RFKISY Trigger: ATAGGAGATCTTAAACCTGCAGGTGAAATTCCTAAG...GGTGTGTCTCCGAGGAAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCAATGCCGGCACTGCAGTTTGGAGTCACTTACACTGATGGCCCCATAGGTCTTAGGAATTTCACCTaGAGGTTTAAGATCTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SAMPALQFGVTYTDGPIGLRNFT*RFKISY Trigger: ATAGGAGATCTTAAACCTGCAGGTGAAATTCCTAAG...ACCTATGGGGCCATCAGTGTAAGTGACTCCAAACTGCAGTGCCGGCATTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR GCA 90 bp | ACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTCTCTCTCGGCCAGCCTaGAACAACTTATTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TTNVCVSAQPFQLYLAIALSRPA*NNLFFS Trigger: GCTGAAAAATAAGTTGTTGCAGGCTGGCCGAGAGAG...AGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CCA 90 bp | CACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCGCTTGTCATGACACGTaGGAATCCGAACCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: HYKCLCVRSAFPAVSSNCACHDT*ESEPSL Trigger: TAATGAAGGTTCGGATTCCCACGTGTCATGACAAGC...GCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CCA 90 bp | ACAATTGGAAAGAGATGTGCACAGCTAGTTCTCATAGACCAAAAAGCAGACTACACTGCACCATCTGCGTaGTCCCAGGCTTGTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: TIGKRCAQLVLIDQKADYTAPSA*SQACHD Trigger: GTCATGACAAGCCTGGGACCACGCAGATGGTGCAGT...GTAGTCTGCTTTTTGGTCTATGAGAACTAGCTGTGCACATCTCTTTCCAATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR TCA 90 bp | AGGTGTACTCAACCCTTTCATATTTGCCTGTTTCCCAGATATGATACTCCCACTCTGGGCAGAAACACCTaGAAAGATCCACCTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RCTQPFHICLFPRYDTPTLGRNT*KDPPRE Trigger: TTCACGAGGTGGATCTTTTCAGGTGTTTCTGCCCAG...AGTGGGAGTATCATATCTGGGAAACAGGCAAATATGAAAGGGTTGAGTACACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR TCA 90 bp | CACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCCACTATCATGAATCGTaGAGTAAGGCCGAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: HYKCLCVRSAFPAVSSNCHYHES*SKAENH Trigger: GTGATTTTCGGCCTTACTTCACGATTCATGATAGTG...GCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | AAGACATTCAAGCTACCTAGTGTATGCAGGCCAGTGAGTAAAAGAGAGAGGAGAAGTGCCTCCAATTTTTaGGTCATTTCTTTCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KTFKLPSVCRPVSKRERRSASNF*VISFRR Trigger: CCGGCGGAAAGAAATGACTCAAAAATTGGAGGCACT...TCTCCTCTCTCTTTTACTCACTGGCCTGCATACACTAGGTAGCTTGAATGTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037585.9 ENSMUST00000224248.2 |
||
| CDS-3UTR GCA 90 bp | ACATTATTCTTCTATTCCCCTGAGTTCAACATGATTGGGCAAAGCAGCACCAATTTGAGCAGTATGCCTTaGAGGTCGTCTGGTAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLFFYSPEFNMIGQSSTNLSSMP*RSSGKA Trigger: GGCCTTACCAGACGACCTGCAAGGCATACTGCTCAA...ATTGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGGAATAGAAGAATAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTGTTTCCCAGATATGATACTCCCACTGCAGGTGGTTTCATGCTACTAATGGCTTGTCATGACACGTaGGAATCCGAACCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: CLFPRYDTPTAGGFMLLMACHDT*ESEPSL Trigger: TAATGAAGGTTCGGATTCCCACGTGTCATGACAAGC...CATTAGTAGCATGAAACCACCTGCAGTGGGAGTATCATATCTGGGAAACAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR CCA 90 bp | AAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTTGCTTGTCATGACACGTaGGAATCCGAACCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: KRERRNQLFHSQNCMCLLACHDT*ESEPSL Trigger: TAATGAAGGTTCGGATTCCCACGTGTCATGACAAGC...AAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | ACATTATTCTTCTATTCCCCTGAGTTCAACATGATTGGGCAAAGCAGCACCAATCTGGGCAGAAACACCTaGAAAGATCCACCTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLFFYSPEFNMIGQSSTNLGRNT*KDPPRE Trigger: TTCACGAGGTGGATCTTTTCAGGTGTTTCTGCCCAG...ATTGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGGAATAGAAGAATAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | ACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTCACTATCATGAATCGTaGAGTAAGGCCGAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTNVCVSAQPFQLYLAIAHYHES*SKAENH Trigger: GTGATTTTCGGCCTTACTTCACGATTCATGATAGTG...AGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | ACATTATTCTTCTATTCCCCTGAGTTCAACATGATTGGGCAAAGCAGCACCAATACTGAGGGCGGAGCTTaGGTACGGGTAGTATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLFFYSPEFNMIGQSSTNTEGGA*VRVVYS Trigger: AGAATATACTACCCGTACTCAAGCTCCGCCCTCAGT...ATTGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGGAATAGAAGAATAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | AAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGAACGTGGTTACTCCTAAGATaGCTGAGGGCGGAGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNMEMSFGISALWNHHRTWLLLR*LRAELE Trigger: CTCAAGCTCCGCCCTCAGTCATCTTAGGAGTAACCA...CGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | CAAACAGTGGAATTTTTGCCCTTGCTTTCCCTTTGGCTTTGTAAACTGTATCACCTTTCCGCCGGGTCTTaGACCAGCCATCAAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: QTVEFLPLLSLWLCKLYHLSAGS*TSHQNL Trigger: CAAATTTTGATGGCTGGTTCAAGACCCGGCGGAAAG...GTGATACAGTTTACAAAGCCAAAGGGAAAGCAAGGGCAAAAATTCCACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR GCA 90 bp | ACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTGGAGAAATACTTTTCTaGAAAGGCATCAAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTNVCVSAQPFQLYLAIAGEILF*KGIKLA Trigger: GGCAAGCTTGATGCCTTTGCAGAAAAGTATTTCTCC...AGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR GCA 90 bp | ATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGAACGCACTCTCTCTCGGCCAGCCTaGAACAACTTATTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IWKCLSVFQHCGTTTERTLSRPA*NNLFFS Trigger: GCTGAAAAATAAGTTGTTGCAGGCTGGCCGAGAGAG...AGTGCGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CCA 90 bp | GTGATTAAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACACTGCACCATCTGCGTaGTCCCAGGCTTGTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VIKNMEMSFGISALWNHHTAPSA*SQACHD Trigger: GTCATGACAAGCCTGGGACCACGCAGATGGTGCAGT...GTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTTAATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CCA 90 bp | GTAAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCACTGTGAAGAAAAACTaGGCAGAAACACCTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKERGEISSSIARTACASTVKKN*AETPEK Trigger: CTTTTCAGGTGTTTCTGCCCAGTTTTTCTTCACAGT...GGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | TCAGTACACTTCATTTCACTTCACTGTCTCTGCCTTCTGAGCACTGGGATTAAAGTAAGTTTGGAATGCTaGGGATATATCACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SVHFISLHCLCLLSTGIKVSLEC*GYITST Trigger: GGTGGAGGTGATATATCCTCAGCATTCCAAACTTAC...TTTAATCCCAGTGCTCAGAAGGCAGAGACAGTGAAGTGAAATGAAGTGTACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR TCA 90 bp | AAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGAACGCTGGGCAGAAACACCTaGAAAGATCCACCTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KNMEMSFGISALWNHHRTLGRNT*KDPPRE Trigger: TTCACGAGGTGGATCTTTTCAGGTGTTTCTGCCCAG...CGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTGAAACATATAGGACAATGGAAGGCACTACATAAGCCTCAGTTATATCTACTGGGCAGAAACACCTaGAAAGATCCACCTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVKHIGQWKALHKPQLYLLGRNT*KDPPRE Trigger: TTCACGAGGTGGATCTTTTCAGGTGTTTCTGCCCAG...TAGATATAACTGAGGCTTATGTAGTGCCTTCCATTGTCCTATATGTTTCACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | AAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGAACGACTGAGGGCGGAGCTTaGGTACGGGTAGTATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNMEMSFGISALWNHHRTTEGGA*VRVVYS Trigger: AGAATATACTACCCGTACTCAAGCTCCGCCCTCAGT...CGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTTTGCTGTATACCCTTCTaGAGTTGTTTTATGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRERRNQLFHSQNCMCLLCCIPF*SCFMIS Trigger: GGAGATCATAAAACAACTTCAGAAGGGTATACAGCA...AAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR TCA 90 bp | ACATTATTCTTCTATTCCCCTGAGTTCAACATGATTGGGCAAAGCAGCACCAATAGTGCCTCCAATTTTTaGGTCATTTCTTTCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLFFYSPEFNMIGQSSTNSASNF*VISFRR Trigger: CCGGCGGAAAGAAATGACTCAAAAATTGGAGGCACT...ATTGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGGAATAGAAGAATAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR TCA 90 bp | GTGATTAAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACATGTCATGCCGGTCTTaGGCAGTATGCCTTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VIKNMEMSFGISALWNHHMSCRS*AVCLAG Trigger: ACCTGCAAGGCATACTGCTCAAGACCGGCATGACAT...GTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTTAATCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR GCA 90 bp | GTAAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCATAATGTGTGGCCAGTaGTGTAGTGTTTTAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VKERGEISSSIARTACASIMCGQ*CSVLAK Trigger: TTTTGCTAAAACACTACAGCACTGGCCACACATTAT...GGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR GCA 90 bp | ACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTGCTATAATGTGTGGCCAGTaGTGTAGTGTTTTAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TNVCVSAQPFQLYLAIAAIMCGQ*CSVLAK Trigger: TTTTGCTAAAACACTACAGCACTGGCCACACATTAT...AGCAGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR GCA 90 bp | GCCCAGAGCTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTGGATTACTTAGGAATTTCACCTaGAGGTTTAAGATCTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: AQSLNSSSSCFSFSVAGLLRNFT*RFKISY Trigger: ATAGGAGATCTTAAACCTGCAGGTGAAATTCCTAAG...TAATCCAGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR GCA 90 bp | CACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCCTTAGGAATTTCACCTaGAGGTTTAAGATCTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HYKCLCVRSAFPAVSSNCLRNFT*RFKISY Trigger: ATAGGAGATCTTAAACCTGCAGGTGAAATTCCTAAG...GCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR GCA 90 bp | AAGACATTCAAGCTACCTAGTGTATGCAGGCCAGTGAGTAAAAGAGAGAGGAGAGGAGAAATACTTTTCTaGAAAGGCATCAAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KTFKLPSVCRPVSKRERRGEILF*KGIKLA Trigger: GGCAAGCTTGATGCCTTTGCAGAAAAGTATTTCTCC...TCTCCTCTCTCTTTTACTCACTGGCCTGCATACACTAGGTAGCTTGAATGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037585.9 ENSMUST00000224248.2 |
||
| CDS-3UTR GCA 90 bp | ACATTATTCTTCTATTCCCCTGAGTTCAACATGATTGGGCAAAGCAGCACCAATCTCTCTCGGCCAGCCTaGAACAACTTATTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLFFYSPEFNMIGQSSTNLSRPA*NNLFFS Trigger: GCTGAAAAATAAGTTGTTGCAGGCTGGCCGAGAGAG...ATTGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGGAATAGAAGAATAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR GCA 90 bp | GTGATTAAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACTTGAGCAGTATGCCTTaGAGGTCGTCTGGTAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VIKNMEMSFGISALWNHHLSSMP*RSSGKA Trigger: GGCCTTACCAGACGACCTGCAAGGCATACTGCTCAA...GTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTTAATCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTACACTTCATTTCACTTCACTGTCTCTGCCTTCTGAGCACTGGGATTAAAGCTTGTCATGACACGTaGGAATCCGAACCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SVHFISLHCLCLLSTGIKACHDT*ESEPSL Trigger: TAATGAAGGTTCGGATTCCCACGTGTCATGACAAGC...TTTAATCCCAGTGCTCAGAAGGCAGAGACAGTGAAGTGAAATGAAGTGTACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR CCA 90 bp | GCCTTACAATTAGCAGCTGGACCCTGTGAAACATATAGGACAATGGAAGGCACTACTGTGAAGAAAAACTaGGCAGAAACACCTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALQLAAGPCETYRTMEGTTVKKN*AETPEK Trigger: CTTTTCAGGTGTTTCTGCCCAGTTTTTCTTCACAGT...AGTGCCTTCCATTGTCCTATATGTTTCACAGGGTCCAGCTGCTAATTGTAAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | GAGCACACAATTGGAAAGAGATGTGCACAGCTAGTTCTCATAGACCAAAAAGCAGCTGATCAAAACCAATaGCTTTTGAAAGTAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EHTIGKRCAQLVLIDQKAADQNQ*LLKVAS Trigger: AGAGGCTACTTTCAAAAGTCATTGGTTTTGATCAGC...TGCTTTTTGGTCTATGAGAACTAGCTGTGCACATCTCTTTCCAATTGTGTGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR TCA 90 bp | ACATTATTCTTCTATTCCCCTGAGTTCAACATGATTGGGCAAAGCAGCACCAATCACTATCATGAATCGTaGAGTAAGGCCGAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLFFYSPEFNMIGQSSTNHYHES*SKAENH Trigger: GTGATTTTCGGCCTTACTTCACGATTCATGATAGTG...ATTGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGGAATAGAAGAATAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGTACTCAACCCTTTCATATTTGCCTGTTTCCCAGATATGATACTCCCACTTGCTGTATACCCTTCTaGAGTTGTTTTATGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCTQPFHICLFPRYDTPTCCIPF*SCFMIS Trigger: GGAGATCATAAAACAACTTCAGAAGGGTATACAGCA...AGTGGGAGTATCATATCTGGGAAACAGGCAAATATGAAAGGGTTGAGTACACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR TCA 90 bp | ATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGAACGCACTTGCTGTATACCCTTCTaGAGTTGTTTTATGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IWKCLSVFQHCGTTTERTCCIPF*SCFMIS Trigger: GGAGATCATAAAACAACTTCAGAAGGGTATACAGCA...AGTGCGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR TCA 90 bp | GTGATTAAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGTGCCTCCAATTTTTaGGTCATTTCTTTCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VIKNMEMSFGISALWNHHSASNF*VISFRR Trigger: CCGGCGGAAAGAAATGACTCAAAAATTGGAGGCACT...GTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTTAATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR GCA 90 bp | ACAATTGGAAAGAGATGTGCACAGCTAGTTCTCATAGACCAAAAAGCAGACTACGGAGAAATACTTTTCTaGAAAGGCATCAAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TIGKRCAQLVLIDQKADYGEILF*KGIKLA Trigger: GGCAAGCTTGATGCCTTTGCAGAAAAGTATTTCTCC...GTAGTCTGCTTTTTGGTCTATGAGAACTAGCTGTGCACATCTCTTTCCAATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR CCA 90 bp | ACATTATTCTTCTATTCCCCTGAGTTCAACATGATTGGGCAAAGCAGCACCAATACTGTGAAGAAAAACTaGGCAGAAACACCTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLFFYSPEFNMIGQSSTNTVKKN*AETPEK Trigger: CTTTTCAGGTGTTTCTGCCCAGTTTTTCTTCACAGT...ATTGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGGAATAGAAGAATAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR CAA 72 bp | CTCTTTCTAATAGCATCTAACTTTATAGCCCAGAGCTaGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFLIASNFIAQS*NSSSSCFSFSV Trigger: AACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGCTATAAAGTTAGATGCTATTAGAAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR TCA 90 bp | CCTGTGAAACATATAGGACAATGGAAGGCACTACATAAGCCTCAGTTATATCTAGCTGATCAAAACCAATaGCTTTTGAAAGTAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVKHIGQWKALHKPQLYLADQNQ*LLKVAS Trigger: AGAGGCTACTTTCAAAAGTCATTGGTTTTGATCAGC...TAGATATAACTGAGGCTTATGTAGTGCCTTCCATTGTCCTATATGTTTCACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR GCA 90 bp | ACATTATTCTTCTATTCCCCTGAGTTCAACATGATTGGGCAAAGCAGCACCAATTTCAAAATACTCTGGTaGTATCTGTTTGAGTACGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLFFYSPEFNMIGQSSTNFKILW*YLFEYG Trigger: ACCGTACTCAAACAGATAGCACCAGAGTATTTTGAA...ATTGGTGCTGCTTTGCCCAATCATGTTGAACTCAGGGGAATAGAAGAATAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| 3UTR CAA 72 bp | GCTGGTGGAGATAACACATTAAACAAACCGCAGGGTTaGAATACTAAACTCCTTAAAAACAATGAAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGGDNTLNKPQG*NTKLLKNNERA Trigger: GGCTCTTTCATTGTTTTTAAGGAGTTTAGTATTCAAACCCTGCGGTTTGTTTAATGTGTTATCTCCACCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR GCA 90 bp | AAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGAACGATAATGTGTGGCCAGTaGTGTAGTGTTTTAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KNMEMSFGISALWNHHRTIMCGQ*CSVLAK Trigger: TTTTGCTAAAACACTACAGCACTGGCCACACATTAT...CGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| 3UTR CAA 72 bp | ATTAAAAATATGGAAATGTCTTTCGGTATTTCAGCATaGTGGAACCACCACAGAACGCACTACAAATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IKNMEMSFGISA*WNHHRTHYKCL Trigger: CAGACATTTGTAGTGCGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS GCA 90 bp | CACGTGGGAATCCGAACCTTCATTACTAGTCCCATGATAGGCAGGTaGAGCGTTTTCCCTGGCACTGGGGCAGGCCATCGGTCAACATCA | + |
|
Preference number: 5 (lower is better) Translates to: HVGIRTFITSPMIGR*SVFPGTGAGHRSTS Trigger: TGATGTTGACCGATGGCCTGCCCCAGTGCCAGGGAAAACGCTGCACCTGCCTATCATGGGACTAGTAATGAAGGTTCGGATTCCCACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037585.9 ENSMUST00000203874.3 |
||
| CDS-3UTR CAA 90 bp | GACCAAGATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACCCGGAGAATAACACTTaGGGCCTCAGAAGGACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DQDEMQSNHMHSAMHSANPENNT*GLRRTL Trigger: AAGCGTCCTTCTGAGGCCCAAAGTGTTATTCTCCGG...GTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATCTTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR CAA 90 bp | GACCAAGATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACTCTTTCCGCCGGGTCTaGAACCAGCCATCAAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: DQDEMQSNHMHSAMHSANSFRRV*NQPSKF Trigger: AAATTTTGATGGCTGGTTCAAGACCCGGCGGAAAGA...GTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATCTTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR CAA 90 bp | TCTGCAATGCCGGCACTGCAGTTTGGAGTCACTTACACTGATGGCCCCATAGGTGCAAAGGCATCAAGCTaGCCACATATCTTTCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: SAMPALQFGVTYTDGPIGAKASS*PHIFLM Trigger: CATTAGAAAGATATGTGGCAAGCTTGATGCCTTTGC...ACCTATGGGGCCATCAGTGTAAGTGACTCCAAACTGCAGTGCCGGCATTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTACAATTAGCAGCTGGACCCTGTGAAACATATAGGACAATGGAAGGCACTTATGTCATGCCGGTCTaGAGCAGTATGCCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALQLAAGPCETYRTMEGTYVMPV*SSMPCR Trigger: CCTGCAAGGCATACTGCTCAAGACCGGCATGACATA...AGTGCCTTCCATTGTCCTATATGTTTCACAGGGTCCAGCTGCTAATTGTAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CAA 90 bp | AAGACATTCAAGCTACCTAGTGTATGCAGGCCAGTGAGTAAAAGAGAGAGGAGACCGGAGAATAACACTTaGGGCCTCAGAAGGACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KTFKLPSVCRPVSKRERRPENNT*GLRRTL Trigger: AAGCGTCCTTCTGAGGCCCAAAGTGTTATTCTCCGG...TCTCCTCTCTCTTTTACTCACTGGCCTGCATACACTAGGTAGCTTGAATGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037585.9 ENSMUST00000224248.2 |
||
| CDS-3UTR CAA 90 bp | CACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTCTTTCCGCCGGGTCTaGAACCAGCCATCAAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: HYKCLCVRSAFPAVSSNCSFRRV*NQPSKF Trigger: AAATTTTGATGGCTGGTTCAAGACCCGGCGGAAAGA...GCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR CAA 90 bp | ACCAAGATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACTCAAGACAACCTGAATTaGAGTCTGGAAAAGACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TKMKCSPTTCTVPCTAPTQDNLN*SLEKTS Trigger: ACTTGTCTTTTCCAGACTCAAATTCAGGTTGTCTTG...AGTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATCTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR CAA 90 bp | TCTGCAATGCCGGCACTGCAGTTTGGAGTCACTTACACTGATGGCCCCATAGGTTATACCCTTCTGAAGTaGTTTTATGATCTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SAMPALQFGVTYTDGPIGYTLLK*FYDLLI Trigger: GATGAGGAGATCATAAAACAACTTCAGAAGGGTATA...ACCTATGGGGCCATCAGTGTAAGTGACTCCAAACTGCAGTGCCGGCATTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR CAA 90 bp | TGTGAGCTCAAAACCAGTCCAGACATTAGTGAGTTTCAGAATGTTGAGAGCTACCCGGAGAATAACACTTaGGGCCTCAGAAGGACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CELKTSPDISEFQNVESYPENNT*GLRRTL Trigger: AAGCGTCCTTCTGAGGCCCAAAGTGTTATTCTCCGG...GTAGCTCTCAACATTCTGAAACTCACTAATGTCTGGACTGGTTTTGAGCTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR CAA 90 bp | ATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGAACGCACTCCGGAGAATAACACTTaGGGCCTCAGAAGGACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IWKCLSVFQHCGTTTERTPENNT*GLRRTL Trigger: AAGCGTCCTTCTGAGGCCCAAAGTGTTATTCTCCGG...AGTGCGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR CAA 90 bp | ATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGAACGCACTTATGTCATGCCGGTCTaGAGCAGTATGCCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IWKCLSVFQHCGTTTERTYVMPV*SSMPCR Trigger: CCTGCAAGGCATACTGCTCAAGACCGGCATGACATA...AGTGCGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CAA 90 bp | ACCAAGATGAAATGCAGTCCAACCACATGCACAGTGCCATGCACAGCGCCAACTTATACCCTTCTGAAGTaGTTTTATGATCTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: TKMKCSPTTCTVPCTAPTYTLLK*FYDLLI Trigger: GATGAGGAGATCATAAAACAACTTCAGAAGGGTATA...AGTTGGCGCTGTGCATGGCACTGTGCATGTGGTTGGACTGCATTTCATCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR CAA 90 bp | CACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCGCAAAGGCATCAAGCTaGCCACATATCTTTCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: HYKCLCVRSAFPAVSSNCAKASS*PHIFLM Trigger: CATTAGAAAGATATGTGGCAAGCTTGATGCCTTTGC...GCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR CAA 90 bp | GTAAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCGCAAAGGCATCAAGCTaGCCACATATCTTTCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: VKERGEISSSIARTACASAKASS*PHIFLM Trigger: CATTAGAAAGATATGTGGCAAGCTTGATGCCTTTGC...GGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
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| CDS-3UTR CAA 90 bp | GCCCAGAGCTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTGGATTACAAGACAACCTGAATTaGAGTCTGGAAAAGACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AQSLNSSSSCFSFSVAGLQDNLN*SLEKTS Trigger: ACTTGTCTTTTCCAGACTCAAATTCAGGTTGTCTTG...TAATCCAGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR CAA 90 bp | ATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACAGAACGCACTTCTTTCCGCCGGGTCTaGAACCAGCCATCAAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: IWKCLSVFQHCGTTTERTSFRRV*NQPSKF Trigger: AAATTTTGATGGCTGGTTCAAGACCCGGCGGAAAGA...AGTGCGTTCTGTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
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| CDS-3UTR CAA 90 bp | ACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTGCTCTTTTTCACTTTAACTaGCTTAGGAATTTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TNVCVSAQPFQLYLAIAALFHFN*LRNFTC Trigger: GCAGGTGAAATTCCTAAGCAAGTTAAAGTGAAAAAG...AGCAGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CAA 90 bp | GTAAAAGAGAGAGGAGAAATCAGCTCTTCCATAGCCAGAACTGCATGTGCCTCCTATACCCTTCTGAAGTaGTTTTATGATCTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VKERGEISSSIARTACASYTLLK*FYDLLI Trigger: GATGAGGAGATCATAAAACAACTTCAGAAGGGTATA...GGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCCTCTCTCTTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR CAA 90 bp | GTGATTAAAAATATGGAAATGTCTTTCGGTATTTCAGCATTGTGGAACCACCACTATGTCATGCCGGTCTaGAGCAGTATGCCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VIKNMEMSFGISALWNHHYVMPV*SSMPCR Trigger: CCTGCAAGGCATACTGCTCAAGACCGGCATGACATA...GTGGTGGTTCCACAATGCTGAAATACCGAAAGACATTTCCATATTTTTAATCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS-3UTR CAA 90 bp | CACTACAAATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCGTGTTTCTTCTGAAGTaGTTTTATGATCTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: HYKCLCVRSAFPAVSSNCVFLLK*FYDLLI Trigger: GATGAGGAGATCATAAAACAACTTCAGAAGAAACAC...GCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATTTGTAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224378.2 |
||
| CDS-3UTR CAA 90 bp | AATGTCTGTGTGTCCGCTCAGCCTTTCCAGCTGTATCTAGCAATTGCTGCTTATTATACCCTTCTGAAGTaGTTTTATGATCTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: NVCVSAQPFQLYLAIAAYYTLLK*FYDLLI Trigger: GATGAGGAGATCATAAAACAACTTCAGAAGGGTATA...ATAAGCAGCAATTGCTAGATACAGCTGGAAAGGCTGAGCGGACACACAGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037585.9 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGTACTCAACCCTTTCATATTTGCCTGTTTCCCAGATATGATACTCCCACTGCAAAGGCATCAAGCTaGCCACATATCTTTCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: RCTQPFHICLFPRYDTPTAKASS*PHIFLM Trigger: CATTAGAAAGATATGTGGCAAGCTTGATGCCTTTGC...AGTGGGAGTATCATATCTGGGAAACAGGCAAATATGAAAGGGTTGAGTACACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR CAA 90 bp | TGCCTGTTTCCCAGATATGATACTCCCACTGCAGGTGGTTTCATGCTACTAATGCCTCTAAGAATACTTTaGTACTCTGAACACTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLFPRYDTPTAGGFMLLMPLRIL*YSEHLH Trigger: ATGCAAGTGTTCAGAGTACAAAAGTATTCTTAGAGG...CATTAGTAGCATGAAACCACCTGCAGTGGGAGTATCATATCTGGGAAACAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS-3UTR CAA 90 bp | TTTATAGCCCAGAGCTTGAACTCAAGTTCCTCTTGCTTCAGCTTCTCAGTTGCTCTTTTTCACTTTAACTaGCTTAGGAATTTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FIAQSLNSSSSCFSFSVALFHFN*LRNFTC Trigger: GCAGGTGAAATTCCTAAGCAAGTTAAAGTGAAAAAG...AGCAACTGAGAAGCTGAAGCAAGAGGAACTTGAGTTCAAGCTCTGGGCTATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037585.9 |
||
| CDS-3UTR CAA 90 bp | AGGTGTACTCAACCCTTTCATATTTGCCTGTTTCCCAGATATGATACTCCCACTCTTTTTCACTTTAACTaGCTTAGGAATTTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RCTQPFHICLFPRYDTPTLFHFN*LRNFTC Trigger: GCAGGTGAAATTCCTAAGCAAGTTAAAGTGAAAAAG...AGTGGGAGTATCATATCTGGGAAACAGGCAAATATGAAAGGGTTGAGTACACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203874.3 |
||
| CDS TCA 90 bp | CCTCAGAAGGACGCTTCTGCTGTATACCCTTCTGAAGTTGTTTTATaGTCTCCTCATCTCTGTTTAGATATGGCTTGTAAGAAGTATAAA | + |
|
Preference number: 5 (lower is better) Translates to: PQKDASAVYPSEVVL*SPHLCLDMACKKYK Trigger: TTTATACTTCTTACAAGCCATATCTAAACAGAGATGAGGAGATCATAAAACAACTTCAGAAGGGTATACAGCAGAAGCGTCCTTCTGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000203874.3 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS GCA 72 bp | ATCCGAACCTTCATTACTAGTCCCATGATAGGCAGGTaGAGCGTTTTCCCTGGCACTGGGGCAGGCCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: IRTFITSPMIGR*SVFPGTGAGHR Trigger: CCGATGGCCTGCCCCAGTGCCAGGGAAAACGCTGCACCTGCCTATCATGGGACTAGTAATGAAGGTTCGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037585.9 ENSMUST00000203874.3 |
||
| CDS CCA 72 bp | TCCCATGATAGGCAGGTGCAGCGTTTTCCCTGGCACTaGGGCAGGCCATCGGTCAACATCATTACAAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SHDRQVQRFPWH*GRPSVNIITSC Trigger: GCAGCTTGTAATGATGTTGACCGATGGCCTGCCCCAGTGCCAGGGAAAACGCTGCACCTGCCTATCATGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037585.9 ENSMUST00000203874.3 |
||
| CDS CCA 72 bp | GTGTATCTGCCTGCTGAGTTAACTGCACCATCTGCGTaGTCCCAGGCTTGTCATGACACGTGGGAATCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: VYLPAELTAPSA*SQACHDTWESE Trigger: TTCGGATTCCCACGTGTCATGACAAGCCTGGGACCACGCAGATGGTGCAGTTAACTCAGCAGGCAGATACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037585.9 ENSMUST00000203874.3 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS TCA 72 bp | GTTAACTGCACCATCTGCGTGGTCCCAGGCTTGTCATaGCACGTGGGAATCCGAACCTTCATTACTAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VNCTICVVPGLS*HVGIRTFITSP Trigger: GGGACTAGTAATGAAGGTTCGGATTCCCACGTGTCATGACAAGCCTGGGACCACGCAGATGGTGCAGTTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037585.9 ENSMUST00000203874.3 ENSMUST00000224111.2 ENSMUST00000224248.2 ENSMUST00000224378.2 |
||
| CDS CCA 72 bp | CTTCTCCCAGAAGACTGTCGGAATCTAAAACAAAACTaGGTATCTCCAAGACAACCTGAATTTGAGTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLPEDCRNLKQN*VSPRQPEFESG Trigger: TCCAGACTCAAATTCAGGTTGTCTTGGAGATACCCAGTTTTGTTTTAGATTCCGACAGTCTTCTGGGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037585.9 ENSMUST00000203874.3 |
||
| CDS CCA 72 bp | GTTTTCATAAATTCTTCTGGAAGGAACTGCCGTAACTaGGGTGGACTCTTCCAAGGAGAAATACTTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VFINSSGRNCRN*GGLFQGEILFC Trigger: GCAGAAAAGTATTTCTCCTTGGAAGAGTCCACCCCAGTTACGGCAGTTCCTTCCAGAAGAATTTATGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000203874.3 ENSMUST00000224111.2 ENSMUST00000224248.2 |
||
| CDS TCA 72 bp | CCTCCAATTTTTGAGTCATTTCTTTCCGCCGGGTCTTaGACCAGCCATCAAAATTTGGAGACTTTAGAAACT | + |
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Preference number: 6 (lower is better) Translates to: PPIFESFLSAGS*TSHQNLETLET Trigger: AGTTTCTAAAGTCTCCAAATTTTGATGGCTGGTTCAAGACCCGGCGGAAAGAAATGACTCAAAAATTGGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000203874.3 ENSMUST00000224111.2 ENSMUST00000224248.2 |
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| CDS TCA 72 bp | GACGCTTCTGCTGTATACCCTTCTGAAGTTGTTTTATaGTCTCCTCATCTCTGTTTAGATATGGCTTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: DASAVYPSEVVL*SPHLCLDMACK Trigger: CTTACAAGCCATATCTAAACAGAGATGAGGAGATCATAAAACAACTTCAGAAGGGTATACAGCAGAAGCGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037585.9 ENSMUST00000203874.3 ENSMUST00000224111.2 ENSMUST00000224248.2 |
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