Pregenerated sensors for DENND5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030313Ensembl transcript IDs: ENSMUST00000111557.8, ENSMUST00000127727.2
Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR GCA 90 bp | TTGCCTTGTCTGCAGAGTGGAGACTGTTCAAACTGGGGCTTCCAGTaGACTGCCCCGGCAGTGCTCACTATGGTCAGACCGGTCCAGATA | + |
Preference number: 1 (lower is better) Translates to: LPCLQSGDCSNWGFQ*TAPAVLTMVRPVQI Trigger: TATCTGGACCGGTCTGACCATAGTGAGCACTGCCGGGGCAGTGCACTGGAAGCCCCAGTTTGAACAGTCTCCACTCTGCAGACAAGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 90 bp | TCCAGTAAACAGGAAAACAGCACTGCTGGCAAGAGCCCAGGGCCCTaGGATTGCACACGGATCCTGAGAGGCCATGGCTTGGGTTTTCAG | + |
Preference number: 1 (lower is better) Translates to: SSKQENSTAGKSPGP*DCTRILRGHGLGFQ Trigger: CTGAAAACCCAAGCCATGGCCTCTCAGGATCCGTGTGCAATCTCAGGGCCCTGGGCTCTTGCCAGCAGTGCTGTTTTCCTGTTTACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 90 bp | CAATACAGCACTTTGCCTTGTCTGCAGAGTGGAGACTGTTCAAACTaGGGCTTCCAGTGCACTGCCCCGGCAGTGCTCACTATGGTCAGA | + |
Preference number: 1 (lower is better) Translates to: QYSTLPCLQSGDCSN*GFQCTAPAVLTMVR Trigger: TCTGACCATAGTGAGCACTGCCGGGGCAGTGCACTGGAAGCCCCAGTTTGAACAGTCTCCACTCTGCAGACAAGGCAAAGTGCTGTATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 90 bp | GGGAAACAGGGTCAAGTCAGGGGTCTTCACTTGTTCCTGGCAGCCTaGTTTCTGACTCACAACCCTACCTCACATGGAGAAGCTCAGTCA | + |
Preference number: 1 (lower is better) Translates to: GKQGQVRGLHLFLAA*FLTHNPTSHGEAQS Trigger: TGACTGAGCTTCTCCATGTGAGGTAGGGTTGTGAGTCAGAAAGCAGGCTGCCAGGAACAAGTGAAGACCCCTGACTTGACCCTGTTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 90 bp | TTTCAGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGACTaGTCATCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGC | + |
Preference number: 1 (lower is better) Translates to: FQAGEMAQRLRALTD*SSRGPEFNSQQPHG Trigger: GCCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGATGAGCAGTCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 90 bp | AGGATGGGACTCCAGGAGGGATGGCTGCTTCAGGACAAAGCATTCTaGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCCTTCCTGGGT | + |
Preference number: 1 (lower is better) Translates to: RMGLQEGWLLQDKAF*FLCETWREKEAFLG Trigger: ACCCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGTCCTGAAGCAGCCATCCCTCCTGGAGTCCCATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 90 bp | GGGGGATGGGGCGGACAGAGGGAGTGGCTGGAACCTAACAAAGACTaGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGT | + |
Preference number: 1 (lower is better) Translates to: GGWGGQREWLEPNKD*AGSLAPLKEFRWPS Trigger: ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTTAGGTTCCAGCCACTCCCTCTGTCCGCCCCATCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 90 bp | CCAGGAGGGATGGCTGCTTCAGGACAAAGCATTCTGGTTCCTTTGTaGGACCTGGAGGGAAAAAGAAGCCTTCCTGGGTTGCACTATGTA | + |
Preference number: 1 (lower is better) Translates to: PGGMAASGQSILVPL*DLEGKRSLPGLHYV Trigger: TACATAGTGCAACCCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGTCCTGAAGCAGCCATCCCTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 90 bp | ATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTTTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
Preference number: 1 (lower is better) Translates to: ISLRMVVSHHVVAGI*TLDLWKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 90 bp | AGGGTCAAGTCAGGGGTCTTCACTTGTTCCTGGCAGCCTGCTTTCTaGCTCACAACCCTACCTCACATGGAGAAGCTCAGTCATTGTGAA | + |
Preference number: 1 (lower is better) Translates to: RVKSGVFTCSWQPAF*LTTLPHMEKLSHCE Trigger: TTCACAATGACTGAGCTTCTCCATGTGAGGTAGGGTTGTGAGTCAGAAAGCAGGCTGCCAGGAACAAGTGAAGACCCCTGACTTGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 90 bp | TGGTTGCTGGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCAAAGTACTTCCTT | + |
Preference number: 1 (lower is better) Translates to: WLLGFELWTFGRAVG*SYPLSHLTSPKYFL Trigger: AAGGAAGTACTTTGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 90 bp | AAGCTGTATACATTCACCACACACAGGATGGGACTCCAGGAGGGATaGCTGCTTCAGGACAAAGCATTCTGGTTCCTTTGTGAGACCTGG | + |
Preference number: 1 (lower is better) Translates to: KLYTFTTHRMGLQEG*LLQDKAFWFLCETW Trigger: CCAGGTCTCACAAAGGAACCAGAATGCTTTGTCCTGAAGCAGCCATCCCTCCTGGAGTCCCATCCTGTGTGTGGTGAATGTATACAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 90 bp | GAGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCGGGTGCTCTT | + |
Preference number: 1 (lower is better) Translates to: ESDLVTDGCEPPCGC*DLNFGPLEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 90 bp | AGAAGAGTTCATCCGATCCTCTGGAACTGTAGTAATAGGTGGGTGTaGGGTACCATGTGGGTGCTGGCAATGAACCTGGGTCTTCTGCAA | + |
Preference number: 1 (lower is better) Translates to: RRVHPILWNCSNRWV*GTMWVLAMNLGLLQ Trigger: TTGCAGAAGACCCAGGTTCATTGCCAGCACCCACATGGTACCTCACACCCACCTATTACTACAGTTCCAGAGGATCGGATGAACTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 90 bp | TCAGACATTCCAGAAGAGGGAGTCAGATCTCGTTACGGATGGTTGTaGGCCACCATGTGGTTGCTGGGATTTGAACTTTGGACCTTTGGA | + |
Preference number: 1 (lower is better) Translates to: SDIPEEGVRSRYGWL*ATMWLLGFELWTFG Trigger: TCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACTCCCTCTTCTGGAATGTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 90 bp | GGATGGCTGCTTCAGGACAAAGCATTCTGGTTCCTTTGTGAGACCTaGAGGGAAAAAGAAGCCTTCCTGGGTTGCACTATGTACACATTT | + |
Preference number: 1 (lower is better) Translates to: GWLLQDKAFWFLCET*REKEAFLGCTMYTF Trigger: AAATGTGTACATAGTGCAACCCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGTCCTGAAGCAGCCATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 90 bp | AGGGCTTCTTGTGTTTGCTTTCCAATTAGCCAAGCTCTTGGGATCTaGTATTTGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
Preference number: 1 (lower is better) Translates to: RASCVCFPISQALGI*YLRSLSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCAAATACCAGATCCCAAGAGCTTGGCTAATTGGAAAGCAAACACAAGAAGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 90 bp | GAGAAAGAAACAAAGATTTCTAAAGACACTGATGCTTGCCAGGTGTaGTGGTGTATGCCTTTGATTCCAGCACTTGGGAGGCAAAGGCAG | + |
Preference number: 1 (lower is better) Translates to: EKETKISKDTDACQV*WCMPLIPALGRQRQ Trigger: CTGCCTTTGCCTCCCAAGTGCTGGAATCAAAGGCATACACCACCACACCTGGCAAGCATCAGTGTCTTTAGAAATCTTTGTTTCTTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 90 bp | GGCAATGAACCTGGGTCTTCTGCAAGAGCAGCCAGTGCTCTTAACTaGTTAGCTACCTCTCCTTGCCAATTTAACTTTAGTTACTACGTA | + |
Preference number: 1 (lower is better) Translates to: GNEPGSSARAASALN*LATSPCQFNFSYYV Trigger: TACGTAGTAACTAAAGTTAAATTGGCAAGGAGAGGTAGCTAAGCAGTTAAGAGCACTGGCTGCTCTTGCAGAAGACCCAGGTTCATTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 90 bp | ACCTGGAGCTCTGCCGAGGCAATTTTGCTACTAACAAGGTATCGGTaGCTAATTAGAGTTCCGAAACTTACTCACCAAAAGATAAAGATT | + |
Preference number: 1 (lower is better) Translates to: TWSSAEAILLLTRYR*LIRVPKLTHQKIKI Trigger: AATCTTTATCTTTTGGTGAGTAAGTTTCGGAACTCTAATTAGGCACCGATACCTTGTTAGTAGCAAAATTGCCTCGGCAGAGCTCCAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 90 bp | CCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCACAGTaGCTTTTAACTTCTCTGGGACAATTGCTTTACATTTCCCTGAAA | + |
Preference number: 1 (lower is better) Translates to: PKLSLESNSLLSLPQ*LLTSLGQLLYISLK Trigger: TTTCAGGGAAATGTAAAGCAATTGTCCCAGAGAAGTTAAAAGCCACTGTGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 90 bp | GACAGAACCCAAGGTTTTGTATTTACTACACAGGCATTCTACCACTaGGCTACATCCCCAGCCACTGCACATTTAATAAGATATTTAAAA | + |
Preference number: 1 (lower is better) Translates to: DRTQGFVFTTQAFYH*ATSPATAHLIRYLK Trigger: TTTTAAATATCTTATTAAATGTGCAGTGGCTGGGGATGTAGCTCAGTGGTAGAATGCCTGTGTAGTAAATACAAAACCTTGGGTTCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 90 bp | GTCTGTTTGTTTTTAAATAGCACAGCACGAAGGATGCCTGTTGTATaGTCCTTACAGAAGTCAGCTTGTACGATTATATGCATCTGTTTT | + |
Preference number: 1 (lower is better) Translates to: VCLFLNSTARRMPVV*SLQKSACTIICICF Trigger: AAAACAGATGCATATAATCGTACAAGCTGACTTCTGTAAGGACCATACAACAGGCATCCTTCGTGCTGTGCTATTTAAAAACAAACAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 90 bp | GATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NFGPLEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATACGCTCAGCATCAGGATaGCCCCATGGGAAAAGACAG | + |
Preference number: 2 (lower is better) Translates to: STSNTELTPAPPWMPFIIRSASG*PHGKRQ Trigger: CTGTCTTTTCCCATGGGGCCATCCTGATGCTGAGCG...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR GCA 90 bp | CTAGAAAGGTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAAACTGGGGCTTCCAGTaGACTGCCCCGGCAGTGCTC | + |
Preference number: 2 (lower is better) Translates to: LERFQEFLNCLLSQIHSSNWGFQ*TAPAVL Trigger: GAGCACTGCCGGGGCAGTGCACTGGAAGCCCCAGTT...TGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAACCTTTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR GCA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAAGGTCTGCAACTCAGATaGACCTGCCCCTGCCTCCCT | + |
Preference number: 2 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKGLQLR*TCPCLP Trigger: AGGGAGGCAGGGGCAGGTGCATCTGAGTTGCAGACC...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTGGCTGTACTTGCTGTTaGGACTCAACTGTGGAACAC | + |
Preference number: 2 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVGCTCC*DSTVEH Trigger: GTGTTCCACAGTTGAGTCCCAACAGCAAGTACAGCC...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATAGGAGGCAAAGGCAGGTaGATGTCTGTGAGTTCAAGG | + |
Preference number: 2 (lower is better) Translates to: STSNTELTPAPPWMPFIIGGKGR*MSVSSR Trigger: CCTTGAACTCACAGACATCCACCTGCCTTTGCCTCC...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 90 bp | TGCTTCTCAGGGCTTCTTGTGTTTGCTTTCCAATTAGCCAAGCTCTaGGGATCTGGTATTTGCGCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
Preference number: 2 (lower is better) Translates to: CFSGLLVFAFQLAKL*GSGICALSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGCGCAAATACCAGATCCCAAGAGCTTGGCTAATTGGAAAGCAAACACAAGAAGCCCTGAGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTCAGGACAAAGCATTCTaGTTCCTTTGTGAGACCTGG | + |
Preference number: 2 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVQDKAF*FLCETW Trigger: CCAGGTCTCACAAAGGAACCAGAATGCTTTGTCCTG...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | AACAAAGACTGGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGTGGACTCCAGGAGGGATaGCTGCTTCAGGACAAAGCA | + |
Preference number: 2 (lower is better) Translates to: NKDWAGSLAPLKEFRWPSGLQEG*LLQDKA Trigger: TGCTTTGTCCTGAAGCAGCCATCCCTCCTGGAGTCC...ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCGGAAAACAGCACTGCTaGCAAGAGCCCAGGGCCCTG | + |
Preference number: 2 (lower is better) Translates to: VQLTEDSTEEMILSKNVSGKQHC*QEPRAL Trigger: CAGGGCCCTGGGCTCTTGCCAGCAGTGCTGTTTTCC...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATAGCTTGCCAGGTGTGGTaGTGTATGCCTTTGATTCCA | + |
Preference number: 2 (lower is better) Translates to: STSNTELTPAPPWMPFIIACQVW*CMPLIP Trigger: TGGAATCAAAGGCATACACCACCACACCTGGCAAGC...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR TCA 90 bp | GGATCCAACACACAAGTAATTGGACCAAGCAAGCATGGCTACTTCCTAAATCACCATTCCAAATCACACTaGGACCTCCTCCTTCTCCCA | + |
Preference number: 2 (lower is better) Translates to: GSNTQVIGPSKHGYFLNHHSKSH*DLLLLP Trigger: TGGGAGAAGGAGGAGGTCTCAGTGTGATTTGGAATG...GTGATTTAGGAAGTAGCCATGCTTGCTTGGTCCAATTACTTGTGTGTTGGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR GCA 90 bp | CATAGCTTCCTATCTGTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGACAGGAAAACAGCACTaGTGGCAAGAGCCCAGGGCC | + |
Preference number: 2 (lower is better) Translates to: HSFLSVQLTEDSTEEMILTGKQH*WQEPRA Trigger: GGCCCTGGGCTCTTGCCAGCAGTGCTGTTTTCCTGT...CAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTACAGATAGGAAGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTTTCCTTTGTGAGACCTaGAGGGAAAAAGAAGCCTTC | + |
Preference number: 2 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVFLCET*REKEAF Trigger: GAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAA...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | CATAGCTTCCTATCTGTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGTCACCACACACAGGATaGGACTCCAGGAGGGATGGC | + |
Preference number: 2 (lower is better) Translates to: HSFLSVQLTEDSTEEMILSPHTG*DSRRDG Trigger: GCCATCCCTCCTGGAGTCCCATCCTGTGTGTGGTGA...CAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTACAGATAGGAAGCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATACTCAGTCTGCCACAGTaGCTTTTAACTTCTCTGGGA | + |
Preference number: 2 (lower is better) Translates to: STSNTELTPAPPWMPFIILSLPQ*LLTSLG Trigger: TCCCAGAGAAGTTAAAAGCCACTGTGGCAGACTGAG...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | GGATCCAACACACAAGTAATTGGACCAAGCAAGCATGGCTACTTCCTAAATCACCTATGTAGCTCTGTCTaGTCTGCAACTCAGATGCAC | + |
Preference number: 2 (lower is better) Translates to: GSNTQVIGPSKHGYFLNHLCSSV*SATQMH Trigger: GTGCATCTGAGTTGCAGACCAGACAGAGCTACATAG...GTGATTTAGGAAGTAGCCATGCTTGCTTGGTCCAATTACTTGTGTGTTGGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | GGATCCAACACACAAGTAATTGGACCAAGCAAGCATGGCTACTTCCTAAATCACACAGGGAATAAAACCTaGAGCTCTGCCGAGGCAATT | + |
Preference number: 2 (lower is better) Translates to: GSNTQVIGPSKHGYFLNHTGNKT*SSAEAI Trigger: AATTGCCTCGGCAGAGCTCCAGGTTTTATTCCCTGT...GTGATTTAGGAAGTAGCCATGCTTGCTTGGTCCAATTACTTGTGTGTTGGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTGTTGGGACTCAACTGTaGAACACTGACTTAAAAGTC | + |
Preference number: 2 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVVGTQL*NTDLKV Trigger: GACTTTTAAGTCAGTGTTCCACAGTTGAGTCCCAAC...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 90 bp | TCAGCTACAACAGGGAATAAAACCTGGAGCTCTGCCGAGGCAATTTaGCTACTAACAAGGTATCGGTGCCTAATTAGAGTTCCGAAACTT | + |
Preference number: 2 (lower is better) Translates to: SATTGNKTWSSAEAI*LLTRYRCLIRVPKL Trigger: AAGTTTCGGAACTCTAATTAGGCACCGATACCTTGTTAGTAGCAAAATTGCCTCGGCAGAGCTCCAGGTTTTATTCCCTGTTGTAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR TCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTTGGCAGCCTGCTTTCTaGCTCACAACCCTACCTCAC | + |
Preference number: 2 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSWQPAF*LTTLPH Trigger: GTGAGGTAGGGTTGTGAGTCAGAAAGCAGGCTGCCA...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR GCA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGCAACTCAGATGCACCTaGCCCTGCCTCCCTAGTGCT | + |
Preference number: 2 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLQLRCT*PCLPSA Trigger: AGCACTAGGGAGGCAGGGGCAGGTGCATCTGAGTTG...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR GCA 90 bp | AACAAAGACTGGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGTTTGGGATCTGGTATTTaGGCTCTCTCTCTCTCTCTC | + |
Preference number: 2 (lower is better) Translates to: NKDWAGSLAPLKEFRWPSLGSGI*ALSLSL Trigger: GAGAGAGAGAGAGAGAGCGCAAATACCAGATCCCAA...ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR TCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTTTACTGGCTTCTTCCTaGCTAGCACCGCTTTCCCCA | + |
Preference number: 2 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSLLASS*LAPLSP Trigger: TGGGGAAAGCGGTGCTAGTCAGGAAGAAGCCAGTAA...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR TCA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAAGGTTGGTCTATAGAGTaGATTCTAGGACAGCCAAGG | + |
Preference number: 2 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKGWSIE*ILGQPR Trigger: CCTTGGCTGTCCTAGAATTCACTCTATAGACCAACC...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAAGATGCTTGCCAGGTGTaGTGGTGTATGCCTTTGATT | + |
Preference number: 2 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKDACQV*WCMPLI Trigger: AATCAAAGGCATACACCACCACACCTGGCAAGCATC...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | GGATCCAACACACAAGTAATTGGACCAAGCAAGCATGGCTACTTCCTAAATCACTTTATTTTCTTTTGCTaGAGTGCTGCTCAGGGCCTT | + |
Preference number: 2 (lower is better) Translates to: GSNTQVIGPSKHGYFLNHFIFFC*SAAQGL Trigger: AAGGCCCTGAGCAGCACTCCAGCAAAAGAAAATAAA...GTGATTTAGGAAGTAGCCATGCTTGCTTGGTCCAATTACTTGTGTGTTGGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR TCA 90 bp | GGATCCAACACACAAGTAATTGGACCAAGCAAGCATGGCTACTTCCTAAATCACGAAGCTCAGTCATTGTaGAGTACTAAAGTACTTCCT | + |
Preference number: 2 (lower is better) Translates to: GSNTQVIGPSKHGYFLNHEAQSL*STKVLP Trigger: AGGAAGTACTTTAGTACTTCACAATGACTGAGCTTC...GTGATTTAGGAAGTAGCCATGCTTGCTTGGTCCAATTACTTGTGTGTTGGATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR GCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTGCCAGTGCTCTTAACTaGTTAGCTACCTCTCCTTGC | + |
Preference number: 2 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSASALN*LATSPC Trigger: GCAAGGAGAGGTAGCTAAGCAGTTAAGAGCACTGGC...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR GCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCTACAATACAGCACTTTaGCTTGTCTGCAGAGTGGAG | + |
Preference number: 2 (lower is better) Translates to: VQLTEDSTEEMILSKNVSYNTAL*LVCRVE Trigger: CTCCACTCTGCAGACAAGGCAAAGTGCTGTATTGTA...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR GCA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGTCCAGGAGGGATGGCTaGTTCAGGACAAAGCATTCT | + |
Preference number: 2 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLSRRDG*FRTKHS Trigger: AGAATGCTTTGTCCTGAAGCAGCCATCCCTCCTGGA...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR GCA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATAGCTTGTACGATTATATaGATCTGTTTTGAGCAATGT | + |
Preference number: 2 (lower is better) Translates to: STSNTELTPAPPWMPFIIACTII*ICFEQC Trigger: ACATTGCTCAAAACAGATGCATATAATCGTACAAGC...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | AACAAAGACTGGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGTGCCACTATGCCTTGCTaGGGTCTGATATTTAAAATA | + |
Preference number: 2 (lower is better) Translates to: NKDWAGSLAPLKEFRWPSATMPC*GLIFKI Trigger: TATTTTAAATATCAGACCCCAGCAAGGCATAGTGGC...ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR TCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTGCCAGGGATATACAGTaGGATCCTGTTTCACAAACA | + |
Preference number: 2 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSARDIQ*DPVSQT Trigger: TGTTTGTGAAACAGGATCTCACTGTATATCCCTGGC...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR GCA 90 bp | CATAGCTTCCTATCTGTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGGGCTTCTTGTGTTTaGTTTCCAATTAGCCAAGCT | + |
Preference number: 2 (lower is better) Translates to: HSFLSVQLTEDSTEEMILRASCV*FPISQA Trigger: AGCTTGGCTAATTGGAAAGCAAACACAAGAAGCCCT...CAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTACAGATAGGAAGCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTGAACCTAACAAAGACTaGGCTGGTAGTTTAGCTCCA | + |
Preference number: 2 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSEPNKD*AGSLAP Trigger: TGGAGCTAAACTACCAGCCCAGTCTTTGTTAGGTTC...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR TCA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAATTTTCACCTATAAAATaGAGAGGCTGTACTTGCTGT | + |
Preference number: 2 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKFSPIK*RGCTCC Trigger: ACAGCAAGTACAGCCTCTTCATTTTATAGGTGAAAA...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR GCA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGGTTGAGATAGGGTCTTaGTATGTAGCTCTGTCTGGT | + |
Preference number: 2 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLVEIGS*YVALSG Trigger: ACCAGACAGAGCTACATAGCAAGACCCTATCTCAAC...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR TCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTCAATTTTATTTGTGCTaGGGACAGAACCCAAGGTTT | + |
Preference number: 2 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSQFYLC*GQNPRF Trigger: AAACCTTGGGTTCTGTCCTCAGCACAAATAAAATTG...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | CTTAAAAGGTACAATGAGGACTGCTGTACACTATGTAAAGCTGTATACATTCACAAAAAGAAGCCTTCCTaGGTTGCACTATGTACACAT | + |
Preference number: 2 (lower is better) Translates to: LKRYNEDCCTLCKAVYIHKKKPS*VALCTH Trigger: ATGTGTACATAGTGCAACCCAGGAAGGCTTCTTTTT...GTGAATGTATACAGCTTTACATAGTGTACAGCAGTCCTCATTGTACCTTTTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CCA 90 bp | CATAGCTTCCTATCTGTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGACAGCAATAAAACCCTaGGATGGACTGTATCTTAAT | + |
Preference number: 2 (lower is better) Translates to: HSFLSVQLTEDSTEEMILTAIKP*DGLYLN Trigger: ATTAAGATACAGTCCATCCCAGGGTTTTATTGCTGT...CAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTACAGATAGGAAGCTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 90 bp | CCTTATTATTCTGCATCACAGAAACATAGCTTCCTATCTGTACAGTaGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTC | + |
Preference number: 2 (lower is better) Translates to: PYYSASQKHSFLSVQ*TEDSTEEMILSKNV Trigger: GACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTACAGATAGGAAGCTATGTTTCTGTGATGCAGAATAATAAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 72 bp | GCTCTGTCTGGTCTGCAACTCAGATGCACCTGCCCCTaGCTCCCTAGTGCTGGGAGTGCGCCACTATGCCTT | + |
Preference number: 3 (lower is better) Translates to: ALSGLQLRCTCP*LPSAGSAPLCL Trigger: AAGGCATAGTGGCGCACTCCCAGCACTAGGGAGGCAGGGGCAGGTGCATCTGAGTTGCAGACCAGACAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 72 bp | CAGGAAAACAGCACTGCTGGCAAGAGCCCAGGGCCCTaGGATTGCACACGGATCCTGAGAGGCCATGGCTTG | + |
Preference number: 3 (lower is better) Translates to: QENSTAGKSPGP*DCTRILRGHGL Trigger: CAAGCCATGGCCTCTCAGGATCCGTGTGCAATCTCAGGGCCCTGGGCTCTTGCCAGCAGTGCTGTTTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 72 bp | CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTTTGGACCTTTGGAAGAGCAGTCGGGTGCTC | + |
Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGI*TLDLWKSSRVL Trigger: GAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 72 bp | GGAGGTAGATCTCTCCAGGTGAGCCTGGTCTACAAATaGAGTTCCAGGGCCAGCCAGGGATATACAGTGAGA | + |
Preference number: 3 (lower is better) Translates to: GGRSLQVSLVYK*SSRASQGYTVR Trigger: TCTCACTGTATATCCCTGGCTGGCCCTGGAACTTCATTTGTAGACCAGGCTCACCTGGAGAGATCTACCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 72 bp | GGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCCAAAGTACTTCCTTCTTA | + |
Preference number: 3 (lower is better) Translates to: GPLEEQSGALTH*AISPAQSTSFL Trigger: TAAGAAGGAAGTACTTTGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 72 bp | TCACCACACACAGGATGGGACTCCAGGAGGGATGGCTaGTTCAGGACAAAGCATTCTGGTTCCTTTGTGAGA | + |
Preference number: 3 (lower is better) Translates to: SPHTGWDSRRDG*FRTKHSGSFVR Trigger: TCTCACAAAGGAACCAGAATGCTTTGTCCTGAAGCAGCCATCCCTCCTGGAGTCCCATCCTGTGTGTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 72 bp | GGTCAAGTCAGGGGTCTTCACTTGTTCCTGGCAGCCTaGTTTCTGACTCACAACCCTACCTCACATGGAGAA | + |
Preference number: 3 (lower is better) Translates to: GQVRGLHLFLAA*FLTHNPTSHGE Trigger: TTCTCCATGTGAGGTAGGGTTGTGAGTCAGAAAGCAGGCTGCCAGGAACAAGTGAAGACCCCTGACTTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 72 bp | GGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGACTaGTCATCCAGAGGTCCTGAGTTCAATTCCCAGCAA | + |
Preference number: 3 (lower is better) Translates to: GEMAQRLRALTD*SSRGPEFNSQQ Trigger: TTGCTGGGAATTGAACTCAGGACCTCTGGATGAGCAGTCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 72 bp | CTCCAGGAGGGATGGCTGCTTCAGGACAAAGCATTCTaGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCC | + |
Preference number: 3 (lower is better) Translates to: LQEGWLLQDKAF*FLCETWREKEA Trigger: GGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGTCCTGAAGCAGCCATCCCTCCTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 72 bp | ACATTCACCACACACAGGATGGGACTCCAGGAGGGATaGCTGCTTCAGGACAAAGCATTCTGGTTCCTTTGT | + |
Preference number: 3 (lower is better) Translates to: TFTTHRMGLQEG*LLQDKAFWFLC Trigger: ACAAAGGAACCAGAATGCTTTGTCCTGAAGCAGCCATCCCTCCTGGAGTCCCATCCTGTGTGTGGTGAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 72 bp | CTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCG | + |
Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNFGPLEEQS Trigger: CGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CAA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAACCCAGGGCCCTGAGATaGCACACGGATCCTGAGAGG | + |
Preference number: 3 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKPRALR*HTDPER Trigger: CCTCTCAGGATCCGTGTGCAATCTCAGGGCCCTGGG...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 72 bp | ATGGCTGCTTCAGGACAAAGCATTCTGGTTCCTTTGTaGGACCTGGAGGGAAAAAGAAGCCTTCCTGGGTTG | + |
Preference number: 3 (lower is better) Translates to: MAASGQSILVPL*DLEGKRSLPGL Trigger: CAACCCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGTCCTGAAGCAGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 72 bp | GATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTTTGGACCTTTGGAAGAGCAG | + |
Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNFGPLEEQ Trigger: CTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 72 bp | GGCGGACAGAGGGAGTGGCTGGAACCTAACAAAGACTaGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGA | + |
Preference number: 3 (lower is better) Translates to: GGQREWLEPNKD*AGSLAPLKEFR Trigger: TCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTTAGGTTCCAGCCACTCCCTCTGTCCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 72 bp | GAGATTAAGAACAGTTTGGTAGGCAGGGCTCTCACATaGATCCCTCACTTAGGAGGTAGATCTCTCCAGGTG | + |
Preference number: 3 (lower is better) Translates to: EIKNSLVGRALT*IPHLGGRSLQV Trigger: CACCTGGAGAGATCTACCTCCTAAGTGAGGGATTCATGTGAGAGCCCTGCCTACCAAACTGTTCTTAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 72 bp | TCTCTCTCTCTCTCTCTCTCTGTTGAGATAGGGTCTTaGTATGTAGCTCTGTCTGGTCTGCAACTCAGATGC | + |
Preference number: 3 (lower is better) Translates to: SLSLSLSVEIGS*YVALSGLQLRC Trigger: GCATCTGAGTTGCAGACCAGACAGAGCTACATAGCAAGACCCTATCTCAACAGAGAGAGAGAGAGAGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 72 bp | AATGAAGAGGCTGTACTTGCTGTTGGGACTCAACTGTaGAACACTGACTTAAAAGTCCACCAAGCGCTCAGC | + |
Preference number: 3 (lower is better) Translates to: NEEAVLAVGTQL*NTDLKVHQALS Trigger: GCTGAGCGCTTGGTGGACTTTTAAGTCAGTGTTCCACAGTTGAGTCCCAACAGCAAGTACAGCCTCTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CAA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTCTACAATACAGCACTTaGCCTTGTCTGCAGAGTGGA | + |
Preference number: 3 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVLQYST*PCLQSG Trigger: TCCACTCTGCAGACAAGGCAAAGTGCTGTATTGTAG...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CAA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATACACGAAGGATGCCTGTaGTATGGTCCTTACAGAAGT | + |
Preference number: 3 (lower is better) Translates to: STSNTELTPAPPWMPFIIHEGCL*YGPYRS Trigger: ACTTCTGTAAGGACCATACAACAGGCATCCTTCGTG...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 72 bp | CATGAGAGTTTTGCCTACACGAATGTATGTTCACTATaGTGGGTGCCCAAGGTGGTTAGAAGAGTTCATCCG | + |
Preference number: 3 (lower is better) Translates to: HESFAYTNVCSL*WVPKVVRRVHP Trigger: CGGATGAACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGCAAAACTCTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 72 bp | GAGAGTTTTGCCTACACGAATGTATGTTCACTATGCTaGGTGCCCAAGGTGGTTAGAAGAGTTCATCCGATC | + |
Preference number: 3 (lower is better) Translates to: ESFAYTNVCSLC*VPKVVRRVHPI Trigger: GATCGGATGAACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGCAAAACTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 72 bp | ACAAAGATTTCTAAAGACACTGATGCTTGCCAGGTGTaGTGGTGTATGCCTTTGATTCCAGCACTTGGGAGG | + |
Preference number: 3 (lower is better) Translates to: TKISKDTDACQV*WCMPLIPALGR Trigger: CCTCCCAAGTGCTGGAATCAAAGGCATACACCACCACACCTGGCAAGCATCAGTGTCTTTAGAAATCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CAA 90 bp | AACAAAGACTGGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGTAGAAGCCTTCCTGGGTaGCACTATGTACACATTTAC | + |
Preference number: 3 (lower is better) Translates to: NKDWAGSLAPLKEFRWPSRSLPG*HYVHIY Trigger: GTAAATGTGTACATAGTGCAACCCAGGAAGGCTTCT...ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 72 bp | TCTGCCGAGGCAATTTTGCTACTAACAAGGTATCGGTaGCTAATTAGAGTTCCGAAACTTACTCACCAAAAG | + |
Preference number: 3 (lower is better) Translates to: SAEAILLLTRYR*LIRVPKLTHQK Trigger: CTTTTGGTGAGTAAGTTTCGGAACTCTAATTAGGCACCGATACCTTGTTAGTAGCAAAATTGCCTCGGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 72 bp | TCTCTTGAGTCAAATTCACTCCTCAGTCTGCCACAGTaGCTTTTAACTTCTCTGGGACAATTGCTTTACATT | + |
Preference number: 3 (lower is better) Translates to: SLESNSLLSLPQ*LLTSLGQLLYI Trigger: AATGTAAAGCAATTGTCCCAGAGAAGTTAAAAGCCACTGTGGCAGACTGAGGAGTGAATTTGACTCAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CAA 90 bp | GGATCCAACACACAAGTAATTGGACCAAGCAAGCATGGCTACTTCCTAAATCACTTCCTAAATTGTCTCTaGAGTCAAATTCACTCCTCA | + |
Preference number: 3 (lower is better) Translates to: GSNTQVIGPSKHGYFLNHFLNCL*SQIHSS Trigger: TGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAA...GTGATTTAGGAAGTAGCCATGCTTGCTTGGTCCAATTACTTGTGTGTTGGATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CAA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGTCTGCCGAGGCAATTTaGCTACTAACAAGGTATCGG | + |
Preference number: 3 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLSAEAI*LLTRYR Trigger: CCGATACCTTGTTAGTAGCAAAATTGCCTCGGCAGA...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 72 bp | TTTTTAAATAGCACAGCACGAAGGATGCCTGTTGTATaGTCCTTACAGAAGTCAGCTTGTACGATTATATGC | + |
Preference number: 3 (lower is better) Translates to: FLNSTARRMPVV*SLQKSACTIIC Trigger: GCATATAATCGTACAAGCTGACTTCTGTAAGGACCATACAACAGGCATCCTTCGTGCTGTGCTATTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR-3UTR CAA 90 bp | CATAGCTTCCTATCTGTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGACTTCTCTGGGACAATaGCTTTACATTTCCCTGAAA | + |
Preference number: 3 (lower is better) Translates to: HSFLSVQLTEDSTEEMILTSLGQ*LYISLK Trigger: TTTCAGGGAAATGTAAAGCAATTGTCCCAGAGAAGT...CAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTACAGATAGGAAGCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 72 bp | ATCTCACCAGCCCAAAGTACTTCCTTCTTAAAGCATTaGGAGCTTTTCACATATAATATGCAAGCCACTGTA | + |
Preference number: 3 (lower is better) Translates to: ISPAQSTSFLKH*ELFTYNMQATV Trigger: TACAGTGGCTTGCATATTATATGTGAAAAGCTCTCAATGCTTTAAGAAGGAAGTACTTTGGGCTGGTGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 72 bp | GTATGGTCCTTACAGAAGTCAGCTTGTACGATTATATaGATCTGTTTTGAGCAATGTTACCATTGTGATGCA | + |
Preference number: 3 (lower is better) Translates to: VWSLQKSACTII*ICFEQCYHCDA Trigger: TGCATCACAATGGTAACATTGCTCAAAACAGATGCATATAATCGTACAAGCTGACTTCTGTAAGGACCATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR GCA 72 bp | GAGATATGTAATAACATCTCTAATAAGCTTCTGCTCTaGAGGCATACATGCAGCCAGAATGATGTACACATA | + |
Preference number: 3 (lower is better) Translates to: EICNNISNKLLL*RHTCSQNDVHI Trigger: TATGTGTACATCATTCTGGCTGCATGTATGCCTGCAGAGCAGAAGCTTATTAGAGATGTTATTACATATCTC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CCA 72 bp | GCAATAAAACCCTGGGATGGACTGTATCTTAATTTGTaGATGTTTCCTATAGTAAGTAGATTGGTCTCTAGA | + |
Preference number: 3 (lower is better) Translates to: AIKPWDGLYLNL*MFPIVSRLVSR Trigger: TCTAGAGACCAATCTACTTACTATAGGAAACATCCACAAATTAAGATACAGTCCATCCCAGGGTTTTATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR TCA 72 bp | TATGCAAGCCACTGTAAGGCCACCAGAAATGTGACATaGAGGTTAAGATTAGAGATTTTATTACTCAAAACA | + |
Preference number: 3 (lower is better) Translates to: YASHCKATRNVT*RLRLEILLLKT Trigger: TGTTTTGAGTAATAAAATCTCTAATCTTAACCTTCATGTCACATTTCTGGTGGCCTTACAGTGGCTTGCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 72 bp | TCCCAGGGGAAACAGGGTCAAGTCAGGGGTCTTCACTaGTTCCTGGCAGCCTGCTTTCTGACTCACAACCCT | + |
Preference number: 4 (lower is better) Translates to: SQGKQGQVRGLH*FLAACFLTHNP Trigger: AGGGTTGTGAGTCAGAAAGCAGGCTGCCAGGAACAAGTGAAGACCCCTGACTTGACCCTGTTTCCCCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTTGGACCTTTGGAAGAGCAGTCGGGTGCT | + |
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NFGPLEEQSGA Trigger: AGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTGGATCTGTCCAGCATTaGGTTTGGCAGGCTTTCCCG | + |
Preference number: 4 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVGSVQH*VWQAFP Trigger: CGGGAAAGCCTGCCAAACCCAATGCTGGACAGATCC...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | CACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTCATCCGATCCTCTGGAACTCCAGTGAGTCCATACTaGAAGAGGATGAAGCGTACA | + |
Preference number: 4 (lower is better) Translates to: HYAGCPRWLEEFIRSSGTPVSPY*KRMKRT Trigger: TGTACGCTTCATCCTCTTGCAGTATGGACTCACTGG...AGTTCCAGAGGATCGGATGAACTCTTCTAACCACCTTGGGCACCCAGCATAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTGGTGGAGTCCGACACTaGTTTCCCAGGTCTTCATCT | + |
Preference number: 4 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVGGVRH*FPRSSS Trigger: AGATGAAGACCTGGGAAAGCAGTGTCGGACTCCACC...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATAGTCGTGGGAGATTTCTaGTGTGGTGGAGTCCGACAC | + |
Preference number: 4 (lower is better) Translates to: STSNTELTPAPPWMPFIIVVGDF*CGGVRH Trigger: GTGTCGGACTCCACCACAGCAGAAATCTCCCACGAC...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTGGGAGATTTCTGCTGTaGTGGAGTCCGACACTGCTT | + |
Preference number: 4 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVGRFLL*WSPTLL Trigger: AAGCAGTGTCGGACTCCACCACAGCAGAAATCTCCC...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | CACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTCATCCGATCCTCTGGAACTTACACACTGCTGTACTaGTCAGCATTATGCATCTGG | + |
Preference number: 4 (lower is better) Translates to: HYAGCPRWLEEFIRSSGTYTLLY*SALCIW Trigger: CCAGATGCATAATGCTGAGCAGTACAGCAGTGTGTA...AGTTCCAGAGGATCGGATGAACTCTTCTAACCACCTTGGGCACCCAGCATAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | CACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTCATCCGATCCTCTGGAACTGGTACAGTGTCTGCATaGCTGTACAGATTTGCTTAC | + |
Preference number: 4 (lower is better) Translates to: HYAGCPRWLEEFIRSSGTGTVSA*LYRFAY Trigger: GTAAGCAAATCTGTACAGCCATGCAGACACTGTACC...AGTTCCAGAGGATCGGATGAACTCTTCTAACCACCTTGGGCACCCAGCATAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | ACAAAGCATTCTGGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCCTTCCTGGTTGACCAGTAAGCCGTaGCTCCATATCCTCTCCAGT | + |
Preference number: 4 (lower is better) Translates to: TKHSGSFVRPGGKKKPSWLTSKP*LHILSS Trigger: ACTGGAGAGGATATGGAGCCACGGCTTACTGGTCAA...CCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | ACAAAGCATTCTGGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCCTTCCTGGCATACTGCAAGAGGATaGAGCGTACACACTGCTGTA | + |
Preference number: 4 (lower is better) Translates to: TKHSGSFVRPGGKKKPSWHTARG*SVHTAV Trigger: TACAGCAGTGTGTACGCTTCATCCTCTTGCAGTATG...CCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | AACAAAGACTGGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGTCTCGCAGCTGTACATTaGGCTGGGAGTCCCTCAAGT | + |
Preference number: 4 (lower is better) Translates to: NKDWAGSLAPLKEFRWPSLAAVH*AGSPSS Trigger: ACTTGAGGGACTCCCAGCTCAATGTACAGCTGCGAG...ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | CATAGCTTCCTATCTGTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGCAGACTTCCCCTGCTTaGCCAGTAAGCCGTGGCTCC | + |
Preference number: 4 (lower is better) Translates to: HSFLSVQLTEDSTEEMILQTSPA*PVSRGS Trigger: GGAGCCACGGCTTACTGGTCAAGCAGGGGAAGTCTG...CAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTACAGATAGGAAGCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | GGATCCAACACACAAGTAATTGGACCAAGCAAGCATGGCTACTTCCTAAATCACTGTGGTAATGCCTTCTaGCACTGTCATCAGGCGCTG | + |
Preference number: 4 (lower is better) Translates to: GSNTQVIGPSKHGYFLNHCGNAF*HCHQAL Trigger: CAGCGCCTGATGACAGTGGCAGAAGGCATTACCACA...GTGATTTAGGAAGTAGCCATGCTTGCTTGGTCCAATTACTTGTGTGTTGGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCAGCATCTGTTCCCGGTTaGTCAGCCAGGACTCCATGT | + |
Preference number: 4 (lower is better) Translates to: VSGVPKLSLESNSLLSLPASVPG*SARTPC Trigger: ACATGGAGTCCTGGCTGACCAACCGGGAACAGATGC...TGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATAAGATTTCTGCTGTGGTaGAGTCCGACACTGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: STSNTELTPAPPWMPFIIRFLLW*SPTLLS Trigger: GGAAAGCAGTGTCGGACTCCACCACAGCAGAAATCT...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | ACAAAGCATTCTGGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCCTTCCTGGTTATCATGGCCAATCTaGACTGTAGTCAGCTTTCCC | + |
Preference number: 4 (lower is better) Translates to: TKHSGSFVRPGGKKKPSWLSWPI*TVVSFP Trigger: GGGAAAGCTGACTACAGTTCAGATTGGCCATGATAA...CCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATACTTCATACATTCGGGTaGTGGCAGGACATTCTGCTA | + |
Preference number: 4 (lower is better) Translates to: STSNTELTPAPPWMPFIILHTFG*WQDILL Trigger: TAGCAGAATGTCCTGCCATCACCCGAATGTATGAAG...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | GGATCCAACACACAAGTAATTGGACCAAGCAAGCATGGCTACTTCCTAAATCACACAGCCCTTTGGGCATaGACAGCATGTTCACTGCAT | + |
Preference number: 4 (lower is better) Translates to: GSNTQVIGPSKHGYFLNHTALWA*TACSLH Trigger: ATGCAGTGAACATGCTGTGCATGCCCAAAGGGCTGT...GTGATTTAGGAAGTAGCCATGCTTGCTTGGTCCAATTACTTGTGTGTTGGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | ACAAAGCATTCTGGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCCTTCCTGGAATTTCTTGCAGGCTTaGATGAAAGGCAGAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: TKHSGSFVRPGGKKKPSWNFLQA*MKGRGV Trigger: CACACCTCTGCCTTTCATGCAAGCCTGCAAGAAATT...CCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTCTAGAATCTGGAATTTaGCGTCCTTCCCAATGTTCC | + |
Preference number: 4 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVLESGI*RPSQCS Trigger: GGAACATTGGGAAGGACGGCAAATTCCAGATTCTAG...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCAGAGAGGCAGGGAGGATaGGTACATAAACATGCTGCC | + |
Preference number: 4 (lower is better) Translates to: VSGVPKLSLESNSLLSLPERQGG*VHKHAA Trigger: GGCAGCATGTTTATGTACCCATCCTCCCTGCCTCTC...TGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | TTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCGAGGTTCCTGGAGGCGGGCTATaGTCTCACTGCCCTTCAGTA | + |
Preference number: 4 (lower is better) Translates to: LTEDSTEEMILSKNVSEVPGGGL*SHCPSV Trigger: TACTGAAGGGCAGTGAGACCATAGCCCGCCTCCAGG...AACCTCGGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | CATAGCTTCCTATCTGTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGCTCTTGGCAAGAGCCTaGAGGCGGGCTATGGTCTCA | + |
Preference number: 4 (lower is better) Translates to: HSFLSVQLTEDSTEEMILLLARA*RRAMVS Trigger: TGAGACCATAGCCCGCCTCCAGGCTCTTGCCAAGAG...CAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTACAGATAGGAAGCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGTCACCCCAGTCCTCTTaGCAAGAGCCTGGAGGCGGG | + |
Preference number: 4 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLSPQSS*QEPGGG Trigger: CCCGCCTCCAGGCTCTTGCCAAGAGGACTGGGGTGA...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | AACAAAGACTGGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGTGTCCAGCATTGGGTTTaGCAGGCTTTCCCGTTAGTG | + |
Preference number: 4 (lower is better) Translates to: NKDWAGSLAPLKEFRWPSVQHWV*QAFPLV Trigger: CACTAACGGGAAAGCCTGCCAAACCCAATGCTGGAC...ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | ACAAAGCATTCTGGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCCTTCCTGGCCAGAACTTTGGATTTaGATGTTCTTCTCAGAGGAC | + |
Preference number: 4 (lower is better) Translates to: TKHSGSFVRPGGKKKPSWPELWI*MFFSED Trigger: GTCCTCTGAGAAGAACATTCAAATCCAAAGTTCTGG...CCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTCTAAAAGAACACAGGTaGACACTTGCACTAGGTTCT | + |
Preference number: 4 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVLKEHR*TLALGS Trigger: AGAACCTAGTGCAAGTGTTCACCTGTGTTCTTTTAG...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | ACAAAGCATTCTGGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCCTTCCTGGAAACTGCTGCATTTCTaGTATATAGATGTCCGCAGG | + |
Preference number: 4 (lower is better) Translates to: TKHSGSFVRPGGKKKPSWKLLHF*YIDVRR Trigger: CCTGCGGACATCTATATATCAGAAATGCAGCAGTTT...CCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | ACAAAGCATTCTGGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCCTTCCTGGGGGTGGATTGCAGTGTaGTCCATTTTCATCAATCTT | + |
Preference number: 4 (lower is better) Translates to: TKHSGSFVRPGGKKKPSWGWIAV*SIFINL Trigger: AAGATTGATGAAAATGGATCACACTGCAATCCACCC...CCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | AACAAAGACTGGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGTAAACTGGAGCAAATGTaGCCACAAGGCAGACTTCCC | + |
Preference number: 4 (lower is better) Translates to: NKDWAGSLAPLKEFRWPSKLEQM*PQGRLP Trigger: GGGAAGTCTGCCTTGTGGTCACATTTGCTCCAGTTT...ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | CTAGAAAGGTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCACGCACAGCAGCACTGTaGGGCTTCCTCTCTCTTTCT | + |
Preference number: 4 (lower is better) Translates to: LERFQEFLNCLLSQIHSSRTAAL*GFLSLS Trigger: AGAAAGAGAGAGGAAGCCTCACAGTGCTGCTGTGCG...TGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAACCTTTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATAAGATGCGGGCAGATTTaGACCCATGATGGAAAACTT | + |
Preference number: 4 (lower is better) Translates to: STSNTELTPAPPWMPFIIRCGQI*THDGKL Trigger: AAGTTTTCCATCATGGGTTCAAATCTGCCCGCATCT...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCCACTGTGGAAGCAGGTaGTCCCTTGTTCCCAGGCAA | + |
Preference number: 4 (lower is better) Translates to: VQLTEDSTEEMILSKNVSHCGSR*SLVPRQ Trigger: TTGCCTGGGAACAAGGGATCACCTGCTTCCACAGTG...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | ACAAAGCATTCTGGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCCTTCCTGGGCACAGCATGTTCACTaGATCTTGATCAAAAGGGTT | + |
Preference number: 4 (lower is better) Translates to: TKHSGSFVRPGGKKKPSWAQHVH*ILIKRV Trigger: AACCCTTTTGATCAAGATGCAGTGAACATGCTGTGC...CCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATAACACAGGTGAACACTTaGACTAGGTTCTCTAATCCC | + |
Preference number: 4 (lower is better) Translates to: STSNTELTPAPPWMPFIITQVNT*TRFSNP Trigger: GGGATTAGAGAACCTAGTGCAAGTGTTCACCTGTGT...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | GTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCAGGGCTATGGTCTCACTaGCCTTCAGTAGCTCATACA | + |
Preference number: 4 (lower is better) Translates to: VSGVPKLSLESNSLLSLPGLWSH*PSVAHT Trigger: TGTATGAGCTACTGAAGGGCAGTGAGACCATAGCCC...TGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | CTAGAAAGGTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCACTCTTTCCTGCGCTGTaGTGTGGCACTTCGACTCAC | + |
Preference number: 4 (lower is better) Translates to: LERFQEFLNCLLSQIHSSLFPAL*CGTSTH Trigger: GTGAGTCGAAGTGCCACAGCACAGCGCAGGAAAGAG...TGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAACCTTTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | TTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCGAGGTTAAAGAGGGAGTTCATTaGGCCCAGGCCTCTGGCAGA | + |
Preference number: 4 (lower is better) Translates to: LTEDSTEEMILSKNVSEVKEGVH*AQASGR Trigger: TCTGCCAGAGGCCTGGGCCCAATGAACTCCCTCTTT...AACCTCGGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTGGAGGAATCCCAAATTaGAGAAGAACTTCAGACAAC | + |
Preference number: 4 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVGGIPN*RRTSDN Trigger: GTTGTCTGAAGTTCTTCTCCAATTTGGGATTCCTCC...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCAGCTGTACATTGAGCTaGGAGTCCCTCAAGTCGGCC | + |
Preference number: 4 (lower is better) Translates to: VQLTEDSTEEMILSKNVSSCTLS*ESLKSA Trigger: GGCCGACTTGAGGGACTCCCAGCTCAATGTACAGCT...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCACCCAGCGATTGTTATTaGCTGGTCCTGTTGCCAAGA | + |
Preference number: 4 (lower is better) Translates to: VSGVPKLSLESNSLLSLPPSDCY*LVLLPR Trigger: TCTTGGCAACAGGACCAGCCAATAACAATCGCTGGG...TGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGGGGTGGTGGCTGCTGTaGGGTAACTGCCTTGTGAAG | + |
Preference number: 4 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLGWWLL*GNCLVK Trigger: CTTCACAAGGCAGTTACCTCACAGCAGCCACCACCC...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAACAGGCCTCTGGCAGATaGCAGGTTCATAAACACCAT | + |
Preference number: 4 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKQASGR*QVHKHH Trigger: ATGGTGTTTATGAACCTGTCATCTGCCAGAGGCCTG...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | GTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCAGCGCTGATAATCTTGTaGGTAGAGAAGGGTCTGCAT | + |
Preference number: 4 (lower is better) Translates to: VSGVPKLSLESNSLLSLPALIIL*VEKGLH Trigger: ATGCAGACCCTTCTCTACTCACAAGATTATCAGCGC...TGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | CTTAAAAGGTACAATGAGGACTGCTGTACACTATGTAAAGCTGTATACATTCACGTCTCCCAGCTCTCCTaGAACACAGATCCACGGGTT | + |
Preference number: 4 (lower is better) Translates to: LKRYNEDCCTLCKAVYIHVSQLS*NTDPRV Trigger: AACCCGTGGATCTGTGTTTCAGGAGAGCTGGGAGAC...GTGAATGTATACAGCTTTACATAGTGTACAGCAGTCCTCATTGTACCTTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGGGCAAGGGTGGTGGCTaGTGTGAGGTAACTGCCTTG | + |
Preference number: 4 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLGKGGG*CEVTAL Trigger: CAAGGCAGTTACCTCACAGCAGCCACCACCCTTGCC...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAAAGCTGCTTGAGGTGCTaGGACAAGAGCTTCTTTTCC | + |
Preference number: 4 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKSCLRC*DKSFFS Trigger: GGAAAAGAAGCTCTTGTCGCAGCACCTCAAGCAGCT...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCACAATGGAATCCACTGTaGAAGCAGGTGATCCCTTGT | + |
Preference number: 4 (lower is better) Translates to: VSGVPKLSLESNSLLSLPQWNPL*KQVIPC Trigger: ACAAGGGATCACCTGCTTCCACAGTGGATTCCATTG...TGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 72 bp | ACAGGGAATAAAACCTGGAGCTCTGCCGAGGCAATTTaGCTACTAACAAGGTATCGGTGCCTAATTAGAGTT | + |
Preference number: 4 (lower is better) Translates to: TGNKTWSSAEAI*LLTRYRCLIRV Trigger: AACTCTAATTAGGCACCGATACCTTGTTAGTAGCAAAATTGCCTCGGCAGAGCTCCAGGTTTTATTCCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | AACAAAGACTGGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGTAATACTACTTGCCAGTaGGTCCATACTGCAAGAGGA | + |
Preference number: 4 (lower is better) Translates to: NKDWAGSLAPLKEFRWPSNTTCQ*VHTARG Trigger: TCCTCTTGCAGTATGGACTCACTGGCAAGTAGTATT...ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | CATAGCTTCCTATCTGTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGACCATAAAATTTCAGTaGCCTCCCAGGAGGCGGAAG | + |
Preference number: 4 (lower is better) Translates to: HSFLSVQLTEDSTEEMILTIKFQ*PPRRRK Trigger: CTTCCGCCTCCTGGGAGGTCACTGAAATTTTATGGT...CAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTACAGATAGGAAGCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | TTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCGAGGTTCAACTGGCGAGTCTGTaGGGTGCTCTTGTTTCTCTT | + |
Preference number: 4 (lower is better) Translates to: LTEDSTEEMILSKNVSEVQLASL*GALVSL Trigger: AAGAGAAACAAGAGCACCTCACAGACTCGCCAGTTG...AACCTCGGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | TTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCGAGGTTGAACAAAACCATAGGTaGGAGAACCATCTTCCCGGG | + |
Preference number: 4 (lower is better) Translates to: LTEDSTEEMILSKNVSEVEQNHR*ENHLPG Trigger: CCCGGGAAGATGGTTCTCGCACCTATGGTTTTGTTC...AACCTCGGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCAGCAGCTGCTTGAGGTaGTGCGACAAGAGCTTCTTT | + |
Preference number: 4 (lower is better) Translates to: VQLTEDSTEEMILSKNVSSSCLR*CDKSFF Trigger: AAAGAAGCTCTTGTCGCAGCACCTCAAGCAGCTGCT...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCATCAGCATTATGCATCTaGTACAGTGTCTGCATGGCT | + |
Preference number: 4 (lower is better) Translates to: VSGVPKLSLESNSLLSLPSALCI*YSVCMA Trigger: AGCCATGCAGACACTGTACCAGATGCATAATGCTGA...TGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCAATGTTTGCTTCTCCATaGCCCAGTTCTACTGCTTCA | + |
Preference number: 4 (lower is better) Translates to: VSGVPKLSLESNSLLSLPMFASP*PSSTAS Trigger: TGAAGCAGTAGAACTGGGCCATGGAGAAGCAAACAT...TGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 72 bp | AAACTAGAAAGGTTTCAGGAGTTCCTAAATTGTCTCTaGAGTCAAATTCACTCCTCAGTCTGCCACAGTGGC | + |
Preference number: 4 (lower is better) Translates to: KLERFQEFLNCL*SQIHSSVCHSG Trigger: GCCACTGTGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAACCTTTCTAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | TTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCGAGGTTTGTCCGCAGGGTGGGTaGCCTTACATTATACAATCT | + |
Preference number: 4 (lower is better) Translates to: LTEDSTEEMILSKNVSEVCPQGG*PYIIQS Trigger: AGATTGTATAATGTAAGGGCACCCACCCTGCGGACA...AACCTCGGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCATGGCCCAGTTCTACTaGTTCATGTCCCATCTTCTC | + |
Preference number: 4 (lower is better) Translates to: VQLTEDSTEEMILSKNVSMAQFY*FMSHLL Trigger: GAGAAGATGGGACATGAAGCAGTAGAACTGGGCCAT...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | CATAGCTTCCTATCTGTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGGTAGGTCACACAGGCTaGCGATCAAGGTGTTTTCTT | + |
Preference number: 4 (lower is better) Translates to: HSFLSVQLTEDSTEEMILVGHTG*RSRCFL Trigger: AAGAAAACACCTTGATCGCCAGCCTGTGTGACCTAC...CAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTACAGATAGGAAGCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | AACAAAGACTGGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGTCTCAAGCAAGTTCTTTaGAATCTGCATTACTCCGGT | + |
Preference number: 4 (lower is better) Translates to: NKDWAGSLAPLKEFRWPSLKQVL*NLHYSG Trigger: ACCGGAGTAATGCAGATTCCAAAGAACTTGCTTGAG...ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAACCGGGTAATTATAAATaGGTGGAACTGAGGCTCTTT | + |
Preference number: 4 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKPGNYK*VELRLF Trigger: AAAGAGCCTCAGTTCCACTCATTTATAATTACCCGG...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | CATAGCTTCCTATCTGTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGGTCCAACGTCAGTCTTaGTCTCAGTCATGTTCTGAA | + |
Preference number: 4 (lower is better) Translates to: HSFLSVQLTEDSTEEMILVQRQS*SQSCSE Trigger: TTCAGAACATGACTGAGATCAAGACTGACGTTGGAC...CAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTACAGATAGGAAGCTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | CTTAAAAGGTACAATGAGGACTGCTGTACACTATGTAAAGCTGTATACATTCACAGTAGTCCACAGCGTTaGGGGAAAGCAGATGGTAAA | + |
Preference number: 4 (lower is better) Translates to: LKRYNEDCCTLCKAVYIHSSPQR*GKADGK Trigger: TTTACCATCTGCTTTCCCTCAACGCTGTGGACTACT...GTGAATGTATACAGCTTTACATAGTGTACAGCAGTCCTCATTGTACCTTTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | TTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCGAGGTTATCTGGTACAGTGTCTaGATGGCTGTACAGATTTGC | + |
Preference number: 4 (lower is better) Translates to: LTEDSTEEMILSKNVSEVIWYSV*MAVQIC Trigger: GCAAATCTGTACAGCCATGCAGACACTGTACCAGAT...AACCTCGGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | GTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCATCTTCTCTACCAACATaGGTTTTGTCTTCATTCTGC | + |
Preference number: 4 (lower is better) Translates to: VSGVPKLSLESNSLLSLPSSLPT*VLSSFC Trigger: GCAGAATGAAGACAAAACGCATGTTGGTAGAGAAGA...TGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTCAAGCCAGTAATGTTTaGTTCTCCATGGCCCAGTTC | + |
Preference number: 4 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSQASNV*FSMAQF Trigger: GAACTGGGCCATGGAGAAGCAAACATTACTGGCTTG...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | CTTAAAAGGTACAATGAGGACTGCTGTACACTATGTAAAGCTGTATACATTCACGGCGAGTCTGTGAGGTaGTCTTGTTTCTCTTCTCTA | + |
Preference number: 4 (lower is better) Translates to: LKRYNEDCCTLCKAVYIHGESVR*SCFSSL Trigger: TAGAGAAGAGAAACAAGAGCACCTCACAGACTCGCC...GTGAATGTATACAGCTTTACATAGTGTACAGCAGTCCTCATTGTACCTTTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCCCCAATGTTCCTGGGTaGAGTGTTAATAGCATTCAC | + |
Preference number: 4 (lower is better) Translates to: VQLTEDSTEEMILSKNVSPNVPG*SVNSIH Trigger: GTGAATGCTATTAACACTGCACCCAGGAACATTGGG...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | CTAGAAAGGTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAAGGCAAACTAGAATCTaGAATTTGCCGTCCTTCCCA | + |
Preference number: 4 (lower is better) Translates to: LERFQEFLNCLLSQIHSSRQTRI*NLPSFP Trigger: TGGGAAGGACGGCAAATTCCAGATTCTAGTTTGCCT...TGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAACCTTTCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTGAGTTGACAGTCATGTaGTCTCGAAGCAGTGCATTC | + |
Preference number: 4 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSELTVM*SRSSAF Trigger: GAATGCACTGCTTCGAGACCACATGACTGTCAACTC...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | CTTAAAAGGTACAATGAGGACTGCTGTACACTATGTAAAGCTGTATACATTCACGAGGTAACTGCCTTGTaGAGTTGGAAGAGGAATTTC | + |
Preference number: 4 (lower is better) Translates to: LKRYNEDCCTLCKAVYIHEVTAL*SWKRNF Trigger: GAAATTCCTCTTCCAACTTCACAAGGCAGTTACCTC...GTGAATGTATACAGCTTTACATAGTGTACAGCAGTCCTCATTGTACCTTTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | AACAAAGACTGGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGTCACAAATTAGCCTCTTaGGGAAGTTCTAATTTAGAC | + |
Preference number: 4 (lower is better) Translates to: NKDWAGSLAPLKEFRWPSHKLAS*GSSNLD Trigger: GTCTAAATTAGAACTTCCTCAAGAGGCTAATTTGTG...ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCTGTTTCAATGAAGCGTaGAAGAAATGGCAGGTAAGG | + |
Preference number: 4 (lower is better) Translates to: VQLTEDSTEEMILSKNVSCFNEA*KKWQVR Trigger: CCTTACCTGCCATTTCTTTCACGCTTCATTGAAACA...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | CTAGAAAGGTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCATTCTCTTCTCTATCCTaGAACTGGAGCAAATGTGAC | + |
Preference number: 4 (lower is better) Translates to: LERFQEFLNCLLSQIHSSFSSLS*NWSKCD Trigger: GTCACATTTGCTCCAGTTTCAGGATAGAGAAGAGAA...TGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAACCTTTCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCTTGCTTGATGGTTTCTaGATGAGCACATCACCTTCA | + |
Preference number: 4 (lower is better) Translates to: VQLTEDSTEEMILSKNVSLLDGF*MSTSPS Trigger: TGAAGGTGATGTGCTCATTCAGAAACCATCAAGCAA...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTGCAGAAGGTTTTGCTTaGTGGTTTCTGAATGAGCAC | + |
Preference number: 4 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSAEGFA*WFLNEH Trigger: GTGCTCATTCAGAAACCATCAAGCAAAACCTTCTGC...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCACACATCCACTCCTTTaGTTAGTGATCCTTCCAAGA | + |
Preference number: 4 (lower is better) Translates to: VQLTEDSTEEMILSKNVSTHPLL*LVILPR Trigger: TCTTGGAAGGATCACTAATCAAAGGAGTGGATGTGT...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | CTAGAAAGGTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGAAAACTTGTTCAAGTaGAGCAACCAGGCCATTTTC | + |
Preference number: 4 (lower is better) Translates to: LERFQEFLNCLLSQIHSSENLFK*SNQAIF Trigger: GAAAATGGCCTGGTTGCTGCACTTGAACAAGTTTTC...TGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAACCTTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAATTCAAAATAAGCCACTaGTTTCTCTACGAAGTCCCA | + |
Preference number: 4 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKFKISH*FLYEVP Trigger: TGGGACTTCGTAGAGAAAGCAGTGGCTTATTTTGAA...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCACTTTGTTCAATTGACTaGGCTGCTTCTTTTAAACTG | + |
Preference number: 4 (lower is better) Translates to: VSGVPKLSLESNSLLSLPLCSID*AASFKL Trigger: CAGTTTAAAAGAAGCAGCCCAGTCAATTGAACAAAG...TGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 72 bp | AGCTATCAAACTAGAAAGGTTTCAGGAGTTCCTAAATaGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCA | + |
Preference number: 4 (lower is better) Translates to: SYQTRKVSGVPK*SLESNSLLSLP Trigger: TGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAACCTTTCTAGTTTGATAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 72 bp | GCAATTTTATTTGTGCTGAGGACAGAACCCAAGGTTTaGTATTTACTACACAGGCATTCTACCACTGAGCTA | + |
Preference number: 4 (lower is better) Translates to: AILFVLRTEPKV*YLLHRHSTTEL Trigger: TAGCTCAGTGGTAGAATGCCTGTGTAGTAAATACAAAACCTTGGGTTCTGTCCTCAGCACAAATAAAATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCATGTTCACTGCATCTTaGTCAAAAGGGTTCCATTCT | + |
Preference number: 4 (lower is better) Translates to: VQLTEDSTEEMILSKNVSMFTAS*SKGFHS Trigger: AGAATGGAACCCTTTTGATCAAGATGCAGTGAACAT...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTCTTCCAAGACTATGGTaGAATCCTGAATGGTCTGAA | + |
Preference number: 4 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSLPRLW*NPEWSE Trigger: TTCAGACCATTCAGGATTTCACCATAGTCTTGGAAG...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCTTTCAAAAGAGAGGTTaGATCTCCCTCGTCAATACT | + |
Preference number: 4 (lower is better) Translates to: VQLTEDSTEEMILSKNVSFQKRG*ISLVNT Trigger: AGTATTGACGAGGGAGATGCAACCTCTCTTTTGAAA...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGGTGGTCTCGAAGCAGTaGATTCTCTTCATACATTCG | + |
Preference number: 4 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLVVSKQ*ILFIHS Trigger: CGAATGTATGAAGAGAATGCACTGCTTCGAGACCAC...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGAGATTTTCTTCTTTCTaGTCCAAGGGCAACTGGCGA | + |
Preference number: 4 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLRFSSF*SKGNWR Trigger: TCGCCAGTTGCCCTTGGACCAGAAAGAAGAAAATCT...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGAGCTTTCCCAGGTTCTaGCACTCAAAAGTCATCTCA | + |
Preference number: 4 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLSFPRF*HSKVIS Trigger: TGAGATGACTTTTGAGTGCCAGAACCTGGGAAAGCT...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CCA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAACTAAAATCTGGTCAGTaGTTTCAAAATAAGCCACTG | + |
Preference number: 4 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKLKSGQ*FQNKPL Trigger: CAGTGGCTTATTTTGAAACCACTGACCAGATTTTAG...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTACAAGGTGTCTCTGTTaGTGTCATAAGAGTTGTATC | + |
Preference number: 4 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSTRCLC*CHKSCI Trigger: GATACAACTCTTATGACATCAACAGAGACACCTTGT...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTATATGCCTCATGTCTTaGATAAGAGAGACTCTGAGT | + |
Preference number: 4 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSICLMS*IRETLS Trigger: ACTCAGAGTCTCTCTTATTCAAGACATGAGGCATAT...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGATGAAGACATTCTTGTaGAAGATGCGGGCAGATTTG | + |
Preference number: 4 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLMKTFL*KMRADL Trigger: CAAATCTGCCCGCATCTTTCACAAGAATGTCTTCAT...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGCTACGAAGTCCCAGATaGAGACATTCTTGTGAAAGA | + |
Preference number: 4 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLLRSPR*RHSCER Trigger: TCTTTCACAAGAATGTCTTCATCTGGGACTTCGTAG...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | CTTAAAAGGTACAATGAGGACTGCTGTACACTATGTAAAGCTGTATACATTCACTTGATGGTTTCTGAATaGGCACATCACCTTCATTGT | + |
Preference number: 4 (lower is better) Translates to: LKRYNEDCCTLCKAVYIHLMVSE*AHHLHC Trigger: ACAATGAAGGTGATGTGCTCATTCAGAAACCATCAA...GTGAATGTATACAGCTTTACATAGTGTACAGCAGTCCTCATTGTACCTTTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 72 bp | ACAGCAATAAAACCCTGGGATGGACTGTATCTTAATTaGTGGATGTTTCCTATAGTAAGTAGATTGGTCTCT | + |
Preference number: 4 (lower is better) Translates to: TAIKPWDGLYLN*WMFPIVSRLVS Trigger: AGAGACCAATCTACTTACTATAGGAAACATCCACAAATTAAGATACAGTCCATCCCAGGGTTTTATTGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR TCA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTCAAGCAGATACTTTTTaGAACATACAAGGTGTCTCT | + |
Preference number: 4 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSQADTF*NIQGVS Trigger: AGAGACACCTTGTATGTTTCAAAAAGTATCTGCTTG...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | TTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCGAGGTTACCCTTGCTCATATTTaGCTTGACCAATTTTCATAT | + |
Preference number: 4 (lower is better) Translates to: LTEDSTEEMILSKNVSEVTLAHI*LDQFSY Trigger: ATATGAAAATTGGTCAAGGCAAATATGAGCAAGGGT...AACCTCGGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCGTTCGAGGTAATGATTaGATTGCTCAGCTTTTTAAT | + |
Preference number: 4 (lower is better) Translates to: VQLTEDSTEEMILSKNVSVRGND*IAQLFN Trigger: ATTAAAAAGCTGAGCAATGCAATCATTACCTCGAAC...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 72 bp | TACAGAAGTCAGCTTGTACGATTATATGCATCTGTTTaGAGCAATGTTACCATTGTGATGCATTTCCCATAT | + |
Preference number: 4 (lower is better) Translates to: YRSQLVRLYASV*SNVTIVMHFPY Trigger: ATATGGGAAATGCATCACAATGGTAACATTGCTCAAAACAGATGCATATAATCGTACAAGCTGACTTCTGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
3UTR CAA 72 bp | TTTGAGCAATGTTACCATTGTGATGCATTTCCCATATaGATTCAGTTTGTTATAGGTCACATAAGAAGCCTT | + |
Preference number: 4 (lower is better) Translates to: FEQCYHCDAFPI*IQFVIGHIRSL Trigger: AAGGCTTCTTATGTGACCTATAACAAACTGAATCAATATGGGAAATGCATCACAATGGTAACATTGCTCAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR GCA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGATGGCTGTACAGATTTaGTTACTTGTAACTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLMAVQI*LLVTSS Trigger: TGAAGAAGTTACAAGTAAGCAAATCTGTACAGCCAT...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 90 bp | CCCAATGTGTTCAGAGCTCTGGCGAAGGCGCTCTTTCCTGCGCTGTaGTGTGGCACTTCGACTCACCCAGCGATTGTTATTGGCTGGTCC | + |
Preference number: 5 (lower is better) Translates to: PNVFRALAKALFPAL*CGTSTHPAIVIGWS Trigger: GGACCAGCCAATAACAATCGCTGGGTGAGTCGAAGTGCCACAGCACAGCGCAGGAAAGAGCGCCTTCGCCAGAGCTCTGAACACATTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 90 bp | TGTCCAGCCCAATGTGTTCAGAGCTCTGGCGAAGGCGCTCTTTCCTaGGCTGTGCTGTGGCACTTCGACTCACCCAGCGATTGTTATTGG | + |
Preference number: 5 (lower is better) Translates to: CPAQCVQSSGEGALS*AVLWHFDSPSDCYW Trigger: CCAATAACAATCGCTGGGTGAGTCGAAGTGCCACAGCACAGCGCAGGAAAGAGCGCCTTCGCCAGAGCTCTGAACACATTGGGCTGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 90 bp | AGCTTCTTGGTCAGTGGCTGGTTAGAGAGCAGCTGCTTGAGGTGCTaGGACAAGAGCTTCTTTTCCAGGGACAACCTTATCCACGCCCGC | + |
Preference number: 5 (lower is better) Translates to: SFLVSGWLESSCLRC*DKSFFSRDNLIHAR Trigger: GCGGGCGTGGATAAGGTTGTCCCTGGAAAAGAAGCTCTTGTCGCAGCACCTCAAGCAGCTGCTCTCTAACCAGCCACTGACCAAGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CCA 90 bp | TATTTCTCCCGTAAGTCACTGTCCAGCCCAATGTGTTCAGAGCTCTaGCGAAGGCGCTCTTTCCTGCGCTGTGCTGTGGCACTTCGACTC | + |
Preference number: 5 (lower is better) Translates to: YFSRKSLSSPMCSEL*RRRSFLRCAVALRL Trigger: GAGTCGAAGTGCCACAGCACAGCGCAGGAAAGAGCGCCTTCGCCAGAGCTCTGAACACATTGGGCTGGACAGTGACTTACGGGAGAAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTGTCACCCCAGTCCTCTaGGCAAGAGCCTGGAGGCGG | + |
Preference number: 5 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVVTPVL*ARAWRR Trigger: CCGCCTCCAGGCTCTTGCCAAGAGGACTGGGGTGAC...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | ACAAAGCATTCTGGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCCTTCCTGGGAAAGAGGGAGTTCATaGGGCCCAGGCCTCTGGCAG | + |
Preference number: 5 (lower is better) Translates to: TKHSGSFVRPGGKKKPSWERGSS*GPGLWQ Trigger: CTGCCAGAGGCCTGGGCCCAATGAACTCCCTCTTTC...CCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 90 bp | CTCTCAAGCGGCAAGGGTGGTGGCTGCTGTGAGGTAACTGCCTTGTaGAGTTGGAAGAGGAATTTCTTGCAGGCTTGCATGAAAGGCAGA | + |
Preference number: 5 (lower is better) Translates to: LSSGKGGGCCEVTAL*SWKRNFLQACMKGR Trigger: TCTGCCTTTCATGCAAGCCTGCAAGAAATTCCTCTTCCAACTTCACAAGGCAGTTACCTCACAGCAGCCACCACCCTTGCCGCTTGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | ACAAAGCATTCTGGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCCTTCCTGGTGCATCTGTTCCCGGTaGGTCAGCCAGGACTCCATG | + |
Preference number: 5 (lower is better) Translates to: TKHSGSFVRPGGKKKPSWCICSR*VSQDSM Trigger: CATGGAGTCCTGGCTGACCAACCGGGAACAGATGCA...CCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 90 bp | GCAACTGGCGAGTCTGTGAGGTGCTCTTGTTTCTCTTCTCTATCCTaGAACTGGAGCAAATGTGACCACAAGGCAGACTTCCCCTGCTTG | + |
Preference number: 5 (lower is better) Translates to: ATGESVRCSCFSSLS*NWSKCDHKADFPCL Trigger: CAAGCAGGGGAAGTCTGCCTTGTGGTCACATTTGCTCCAGTTTCAGGATAGAGAAGAGAAACAAGAGCACCTCACAGACTCGCCAGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 90 bp | CTCCTGGTTGTCGTGGGAGATTTCTGCTGTGGTGGAGTCCGACACTaGTTTCCCAGGTCTTCATCTGAAGCTGATGTCATCAATTCTCCA | + |
Preference number: 5 (lower is better) Translates to: LLVVVGDFCCGGVRH*FPRSSSEADVINSP Trigger: TGGAGAATTGATGACATCAGCTTCAGATGAAGACCTGGGAAAGCAGTGTCGGACTCCACCACAGCAGAAATCTCCCACGACAACCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 90 bp | GTTAGTGAGGTAATACTCAGTCTCCTGGTTGTCGTGGGAGATTTCTaGTGTGGTGGAGTCCGACACTGCTTTCCCAGGTCTTCATCTGAA | + |
Preference number: 5 (lower is better) Translates to: VSEVILSLLVVVGDF*CGGVRHCFPRSSSE Trigger: TTCAGATGAAGACCTGGGAAAGCAGTGTCGGACTCCACCACAGCAGAAATCTCCCACGACAACCAGGAGACTGAGTATTACCTCACTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 90 bp | AAAGATGCGGGCAGATTTGAACCCATGATGGAAAACTTGTTCAAGTaGAGCAACCAGGCCATTTTCTCCGCACAGCAGCACTGTGAGGCT | + |
Preference number: 5 (lower is better) Translates to: KDAGRFEPMMENLFK*SNQAIFSAQQHCEA Trigger: AGCCTCACAGTGCTGCTGTGCGGAGAAAATGGCCTGGTTGCTGCACTTGAACAAGTTTTCCATCATGGGTTCAAATCTGCCCGCATCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CCA 90 bp | TGTGTAAAGCGGTTGGCAAAGACCTCTCGCAGCTGTACATTGAGCTaGGAGTCCCTCAAGTCGGCCTCTTCACACTGCAATTTTAAATCC | + |
Preference number: 5 (lower is better) Translates to: CVKRLAKTSRSCTLS*ESLKSASSHCNFKS Trigger: GGATTTAAAATTGCAGTGTGAAGAGGCCGACTTGAGGGACTCCCAGCTCAATGTACAGCTGCGAGAGGTCTTTGCCAACCGCTTTACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 90 bp | CAGTCATGTGGTCTCGAAGCAGTGCATTCTCTTCATACATTCGGGTaGTGGCAGGACATTCTGCTAGCAATGGAATCCACTGTGGAAGCA | + |
Preference number: 5 (lower is better) Translates to: QSCGLEAVHSLHTFG*WQDILLAMESTVEA Trigger: TGCTTCCACAGTGGATTCCATTGCTAGCAGAATGTCCTGCCATCACCCGAATGTATGAAGAGAATGCACTGCTTCGAGACCACATGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 90 bp | AGTGAGTCCATACTGCAAGAGGATGAAGCGTACACACTGCTGTACTaGTCAGCATTATGCATCTGGTACAGTGTCTGCATGGCTGTACAG | + |
Preference number: 5 (lower is better) Translates to: SESILQEDEAYTLLY*SALCIWYSVCMAVQ Trigger: CTGTACAGCCATGCAGACACTGTACCAGATGCATAATGCTGAGCAGTACAGCAGTGTGTACGCTTCATCCTCTTGCAGTATGGACTCACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | CACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTCATCCGATCCTCTGGAACTCATCGGACTGTAACTTaGGAAAGAACCCTTGCTCAT | + |
Preference number: 5 (lower is better) Translates to: HYAGCPRWLEEFIRSSGTHRTVT*ERTLAH Trigger: ATGAGCAAGGGTTCTTTCCAAAGTTACAGTCCGATG...AGTTCCAGAGGATCGGATGAACTCTTCTAACCACCTTGGGCACCCAGCATAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | GCCTACACGAATGTATGTTCACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTTATTGGCTGGTCCTGTaGCCAAGACATCGGACTGTA | + |
Preference number: 5 (lower is better) Translates to: AYTNVCSLCWVPKVVRRVYWLVL*PRHRTV Trigger: TACAGTCCGATGTCTTGGCAACAGGACCAGCCAATA...AACTCTTCTAACCACCTTGGGCACCCAGCATAGTGAACATACATTCGTGTAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 90 bp | AGGTTGCATCTCCCTCGTCAATACTACTTGCCAGTGAGTCCATACTaGAAGAGGATGAAGCGTACACACTGCTGTACTGCTCAGCATTAT | + |
Preference number: 5 (lower is better) Translates to: RLHLPRQYYLPVSPY*KRMKRTHCCTAQHY Trigger: ATAATGCTGAGCAGTACAGCAGTGTGTACGCTTCATCCTCTTGCAGTATGGACTCACTGGCAAGTAGTATTGACGAGGGAGATGCAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 90 bp | AGGTTCTGGCACTCAAAAGTCATCTCAAGCAAGTTCTTTGGAATCTaGATTACTCCGGTGTCTCCCAGCTCTCCTGAAACACAGATCCAC | + |
Preference number: 5 (lower is better) Translates to: RFWHSKVISSKFFGI*ITPVSPSSPETQIH Trigger: GTGGATCTGTGTTTCAGGAGAGCTGGGAGACACCGGAGTAATGCAGATTCCAAAGAACTTGCTTGAGATGACTTTTGAGTGCCAGAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | AACAAAGACTGGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGTTTAGAGAGCAGCTGCTaGAGGTGCTGCGACAAGAGC | + |
Preference number: 5 (lower is better) Translates to: NKDWAGSLAPLKEFRWPSLESSC*RCCDKS Trigger: GCTCTTGTCGCAGCACCTCAAGCAGCTGCTCTCTAA...ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATAGAAGCAGGTGATCCCTaGTTCCCAGGCAAACTAGAA | + |
Preference number: 5 (lower is better) Translates to: STSNTELTPAPPWMPFIIEAGDP*FPGKLE Trigger: TTCTAGTTTGCCTGGGAACAAGGGATCACCTGCTTC...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 90 bp | AATCTTGTGAGTAGAGAAGGGTCTGCATCTCTAAAAGAACACAGGTaGACACTTGCACTAGGTTCTCTAATCCCAGGAGCTCACAGGCCT | + |
Preference number: 5 (lower is better) Translates to: NLVSREGSASLKEHR*TLALGSLIPGAHRP Trigger: AGGCCTGTGAGCTCCTGGGATTAGAGAACCTAGTGCAAGTGTTCACCTGTGTTCTTTTAGAGATGCAGACCCTTCTCTACTCACAAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 90 bp | CTGCAAGAGGATGAAGCGTACACACTGCTGTACTGCTCAGCATTATaGATCTGGTACAGTGTCTGCATGGCTGTACAGATTTGCTTACTT | + |
Preference number: 5 (lower is better) Translates to: LQEDEAYTLLYCSAL*IWYSVCMAVQICLL Trigger: AAGTAAGCAAATCTGTACAGCCATGCAGACACTGTACCAGATGCATAATGCTGAGCAGTACAGCAGTGTGTACGCTTCATCCTCTTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATAGAATTTCTTGCAGGCTaGCATGAAAGGCAGAGGTGT | + |
Preference number: 5 (lower is better) Translates to: STSNTELTPAPPWMPFIIEFLAG*HERQRC Trigger: ACACCTCTGCCTTTCATGCAAGCCTGCAAGAAATTC...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | AGCACATCTAACACTGAACTCACTCCAGCCCCTCCTTGGATGCCTTTTATCATATGGAAGAGGAATTTCTaGCAGGCTTGCATGAAAGGC | + |
Preference number: 5 (lower is better) Translates to: STSNTELTPAPPWMPFIIWKRNF*QACMKG Trigger: GCCTTTCATGCAAGCCTGCAAGAAATTCCTCTTCCA...TATGATAAAAGGCATCCAAGGAGGGGCTGGAGTGAGTTCAGTGTTAGATGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 90 bp | AAATTTTCACCTGAAGTTGTATTTGCAGTATCTTGGCTCTTGCCATaGCGATCTGCTTCTAGCCATTGGTACAAAACCGCCAGCTCGTCG | + |
Preference number: 5 (lower is better) Translates to: KFSPEVVFAVSWLLP*RSASSHWYKTASSS Trigger: CGACGAGCTGGCGGTTTTGTACCAATGGCTAGAAGCAGATCGTCATGGCAAGAGCCAAGATACTGCAAATACAACTTCAGGTGAAAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127727.2 |
||
CDS CCA 90 bp | GAGGATGAAGCGTACACACTGCTGTACTGCTCAGCATTATGCATCTaGTACAGTGTCTGCATGGCTGTACAGATTTGCTTACTTGTAACT | + |
Preference number: 5 (lower is better) Translates to: EDEAYTLLYCSALCI*YSVCMAVQICLLVT Trigger: AGTTACAAGTAAGCAAATCTGTACAGCCATGCAGACACTGTACCAGATGCATAATGCTGAGCAGTACAGCAGTGTGTACGCTTCATCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | CACTATGCTGGGTGCCCAAGGTGGTTAGAAGAGTTCATCCGATCCTCTGGAACTTCAATCTTTGTTCAATaGACTGGGCTGCTTCTTTTA | + |
Preference number: 5 (lower is better) Translates to: HYAGCPRWLEEFIRSSGTSIFVQ*TGLLLL Trigger: TAAAAGAAGCAGCCCAGTCAATTGAACAAAGATTGA...AGTTCCAGAGGATCGGATGAACTCTTCTAACCACCTTGGGCACCCAGCATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | ACAAAGCATTCTGGTTCCTTTGTGAGACCTGGAGGGAAAAAGAAGCCTTCCTGGCATGGCTGTACAGATTaGCTTACTTGTAACTTCTTC | + |
Preference number: 5 (lower is better) Translates to: TKHSGSFVRPGGKKKPSWHGCTD*LTCNFF Trigger: GAAGAAGTTACAAGTAAGCAAATCTGTACAGCCATG...CCAGGAAGGCTTCTTTTTCCCTCCAGGTCTCACAAAGGAACCAGAATGCTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | CTAGAAAGGTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAACCCAGCGATTGTTATaGGCTGGTCCTGTTGCCAAG | + |
Preference number: 5 (lower is better) Translates to: LERFQEFLNCLLSQIHSSTQRLL*AGPVAK Trigger: CTTGGCAACAGGACCAGCCAATAACAATCGCTGGGT...TGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAACCTTTCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 90 bp | TTGTGTTCTGAAAGACAGCCCTTTGGGCATGCACAGCATGTTCACTaGATCTTGATCAAAAGGGTTCCATTCTATGTTTTGAGGATAGTG | + |
Preference number: 5 (lower is better) Translates to: LCSERQPFGHAQHVH*ILIKRVPFYVLRIV Trigger: CACTATCCTCAAAACATAGAATGGAACCCTTTTGATCAAGATGCAGTGAACATGCTGTGCATGCCCAAAGGGCTGTCTTTCAGAACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111557.8 ENSMUST00000127727.2 |
||
CDS-3UTR CAA 90 bp | GTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCAGTCTGCCAGTTCCATTCTATGTTTaGAGGATAGTGGGCCAGAAC | + |
Preference number: 5 (lower is better) Translates to: VSGVPKLSLESNSLLSLPVPFYV*RIVGQN Trigger: GTTCTGGCCCACTATCCTCAAAACATAGAATGGAAC...TGGCAGACTGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 90 bp | GCAGGCTTGCATGAAAGGCAGAGGTGTGATCAAGCAGATACTTTTTaGAACATACAAGGTGTCTCTGTTGATGTCATAAGAGTTGTATCG | + |
Preference number: 5 (lower is better) Translates to: AGLHERQRCDQADTF*NIQGVSVDVIRVVS Trigger: CGATACAACTCTTATGACATCAACAGAGACACCTTGTATGTTTCAAAAAGTATCTGCTTGATCACACCTCTGCCTTTCATGCAAGCCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 90 bp | CCAAGACATCGGACTGTAACTTTGGAAAGAACCCTTGCTCATATTTaGCTTGACCAATTTTCATATCAAGTAGATGTGGGTGGATTGCAG | + |
Preference number: 5 (lower is better) Translates to: PRHRTVTLERTLAHI*LDQFSYQVDVGGLQ Trigger: CTGCAATCCACCCACATCTACTTGATATGAAAATTGGTCAAGGCAAATATGAGCAAGGGTTCTTTCCAAAGTTACAGTCCGATGTCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | CTTAAAAGGTACAATGAGGACTGCTGTACACTATGTAAAGCTGTATACATTCACCCTCGTCAATACTACTaGCCAGTGAGTCCATACTGC | + |
Preference number: 5 (lower is better) Translates to: LKRYNEDCCTLCKAVYIHPRQYY*PVSPYC Trigger: GCAGTATGGACTCACTGGCAAGTAGTATTGACGAGG...GTGAATGTATACAGCTTTACATAGTGTACAGCAGTCCTCATTGTACCTTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAACTTTGGAAAGAACCCTaGCTCATATTTGCCTTGACC | + |
Preference number: 5 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKLWKEP*LIFALT Trigger: GGTCAAGGCAAATATGAGCAAGGGTTCTTTCCAAAG...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | CTAGAAAGGTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCATTCTCCAATTCCTTCTaGGATCTGTCCAGCATTGGG | + |
Preference number: 5 (lower is better) Translates to: LERFQEFLNCLLSQIHSSFSNSF*DLSSIG Trigger: CCCAATGCTGGACAGATCCAAGAAGGAATTGGAGAA...TGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAACCTTTCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAAACTAGAATCTGGAATTaGCCGTCCTTCCCAATGTTC | + |
Preference number: 5 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKTRIWN*PSFPMF Trigger: GAACATTGGGAAGGACGGCAAATTCCAGATTCTAGT...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 90 bp | ATCCGAGAATCAAAGACCCGAAGCAGAGGGTCTTTCTCTTCCCATTaGGACATGATCTTATTATCAATAAAGGTGGCAAACATCTGTGTT | + |
Preference number: 5 (lower is better) Translates to: IRESKTRSRGSFSSH*DMILLSIKVANICV Trigger: AACACAGATGTTTGCCACCTTTATTGATAATAAGATCATGTCTCAATGGGAAGAGAAAGACCCTCTGCTTCGGGTCTTTGATTCTCGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 90 bp | CTTTGTTCAATTGACTGGGCTGCTTCTTTTAAACTGCTGCATTTCTaGTATATAGATGTCCGCAGGGTGGGTGCCCTTACATTATACAAT | + |
Preference number: 5 (lower is better) Translates to: LCSIDWAASFKLLHF*YIDVRRVGALTLYN Trigger: ATTGTATAATGTAAGGGCACCCACCCTGCGGACATCTATATATCAGAAATGCAGCAGTTTAAAAGAAGCAGCCCAGTCAATTGAACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | GGATCCAACACACAAGTAATTGGACCAAGCAAGCATGGCTACTTCCTAAATCACTCAAGCAGATACTTTTaGAAACATACAAGGTGTCTC | + |
Preference number: 5 (lower is better) Translates to: GSNTQVIGPSKHGYFLNHSSRYF*KHTRCL Trigger: GAGACACCTTGTATGTTTCAAAAAGTATCTGCTTGA...GTGATTTAGGAAGTAGCCATGCTTGCTTGGTCCAATTACTTGTGTGTTGGATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | GGATCCAACACACAAGTAATTGGACCAAGCAAGCATGGCTACTTCCTAAATCACAACTCAATAAAATGGTaGTCAATATCCACGAAGCAC | + |
Preference number: 5 (lower is better) Translates to: GSNTQVIGPSKHGYFLNHNSIKW*SISTKH Trigger: GTGCTTCGTGGATATTGACAACCATTTTATTGAGTT...GTGATTTAGGAAGTAGCCATGCTTGCTTGGTCCAATTACTTGTGTGTTGGATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCGTAGATGTGGGTGGATaGCAGTGTGATCCATTTTCA | + |
Preference number: 5 (lower is better) Translates to: VQLTEDSTEEMILSKNVSVDVGG*QCDPFS Trigger: TGAAAATGGATCACACTGCAATCCACCCACATCTAC...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | AACAAAGACTGGGCTGGTAGTTTAGCTCCACTTAAAGAGTTTAGATGGCCAAGTCTACCAACATGCGTTTaGTCTTCATTCTGCATTCTT | + |
Preference number: 5 (lower is better) Translates to: NKDWAGSLAPLKEFRWPSLPTCV*SSFCIL Trigger: AAGAATGCAGAATGAAGACAAAACGCATGTTGGTAG...ACTTGGCCATCTAAACTCTTTAAGTGGAGCTAAACTACCAGCCCAGTCTTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTATTCGGATAAGGGAGTaGACAGTCATGTGGTCTCGA | + |
Preference number: 5 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSIRIRE*TVMWSR Trigger: TCGAGACCACATGACTGTCAACTCCCTTATCCGAAT...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | CTAGAAAGGTTTCAGGAGTTCCTAAATTGTCTCTTGAGTCAAATTCACTCCTCACATGTTCACTGCATCTaGATCAAAAGGGTTCCATTC | + |
Preference number: 5 (lower is better) Translates to: LERFQEFLNCLLSQIHSSHVHCI*IKRVPF Trigger: GAATGGAACCCTTTTGATCAAGATGCAGTGAACATG...TGAGGAGTGAATTTGACTCAAGAGACAATTTAGGAACTCCTGAAACCTTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | CTTAAAAGGTACAATGAGGACTGCTGTACACTATGTAAAGCTGTATACATTCACGGTCAGTTCCTTCTTTaGACTGAAGACCCATCAGAT | + |
Preference number: 5 (lower is better) Translates to: LKRYNEDCCTLCKAVYIHGQFLL*TEDPSD Trigger: ATCTGATGGGTCTTCAGTCAAAAGAAGGAACTGACC...GTGAATGTATACAGCTTTACATAGTGTACAGCAGTCCTCATTGTACCTTTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | TACCGCAAAAGCAAACTTCTTTACAAAGCTCAACGGTCCATTGGATTGAGCAAAAATATGCCTCATGTCTaGAATAAGAGAGACTCTGAG | + |
Preference number: 5 (lower is better) Translates to: YRKSKLLYKAQRSIGLSKNMPHV*NKRDSE Trigger: CTCAGAGTCTCTCTTATTCAAGACATGAGGCATATT...TTTGCTCAATCCAATGGACCGTTGAGCTTTGTAAAGAAGTTTGCTTTTGCGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTTCTCAAGCAAGTTCTTaGGAATCTGCATTACTCCGG | + |
Preference number: 5 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSSQASS*ESALLR Trigger: CCGGAGTAATGCAGATTCCAAAGAACTTGCTTGAGA...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | CTTAAAAGGTACAATGAGGACTGCTGTACACTATGTAAAGCTGTATACATTCACGCCAGAACTTTGGATTaGAATGTTCTTCTCAGAGGA | + |
Preference number: 5 (lower is better) Translates to: LKRYNEDCCTLCKAVYIHARTLD*NVLLRG Trigger: TCCTCTGAGAAGAACATTCAAATCCAAAGTTCTGGC...GTGAATGTATACAGCTTTACATAGTGTACAGCAGTCCTCATTGTACCTTTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | GTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGAGTAAGAATGTCTCCATAAACATGCTGCCATaGAAAAGGGAACAAGAGTGT | + |
Preference number: 5 (lower is better) Translates to: VQLTEDSTEEMILSKNVSINMLP*KREQEC Trigger: ACACTCTTGTTCCCTTTTCAATGGCAGCATGTTTAT...GGAGACATTCTTACTCAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | CTTAAAAGGTACAATGAGGACTGCTGTACACTATGTAAAGCTGTATACATTCACAGGAGGAATCCCAAATaGGAGAAGAACTTCAGACAA | + |
Preference number: 5 (lower is better) Translates to: LKRYNEDCCTLCKAVYIHRRNPK*EKNFRQ Trigger: TTGTCTGAAGTTCTTCTCCAATTTGGGATTCCTCCT...GTGAATGTATACAGCTTTACATAGTGTACAGCAGTCCTCATTGTACCTTTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | CATAGCTTCCTATCTGTACAGTTGACTGAAGATTCAACAGAAGAAATGATCCTGGAGAGAAAAGAAGCTTaGTCAAAGTTCTGCATCTGT | + |
Preference number: 5 (lower is better) Translates to: HSFLSVQLTEDSTEEMILERKEA*SKFCIC Trigger: ACAGATGCAGAACTTTGACAAAGCTTCTTTTCTCTC...CAGGATCATTTCTTCTGTTGAATCTTCAGTCAACTGTACAGATAGGAAGCTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | CTTAAAAGGTACAATGAGGACTGCTGTACACTATGTAAAGCTGTATACATTCACAGCACATCACCTTCATaGTCTAAAATCTGGTCAGTG | + |
Preference number: 5 (lower is better) Translates to: LKRYNEDCCTLCKAVYIHSTSPS*SKIWSV Trigger: CACTGACCAGATTTTAGACAATGAAGGTGATGTGCT...GTGAATGTATACAGCTTTACATAGTGTACAGCAGTCCTCATTGTACCTTTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | GCCTTGTCTACTACTTCCTATTTTAGAGATATTGACACATGTCAGACACAAAGTTACACATCCACTCCTTaGATTAGTGATCCTTCCAAG | + |
Preference number: 5 (lower is better) Translates to: ALSTTSYFRDIDTCQTQSYTSTP*ISDPSK Trigger: CTTGGAAGGATCACTAATCAAAGGAGTGGATGTGTA...ACTTTGTGTCTGACATGTGTCAATATCTCTAAAATAGGAAGTAGTAGACAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGAACTGCCTTGTGAAGTaGGAAGAGGAATTTCTTGCA | + |
Preference number: 5 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLNCLVK*EEEFLA Trigger: TGCAAGAAATTCCTCTTCCAACTTCACAAGGCAGTT...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS-3UTR CAA 90 bp | TTTAGAGATATTGACACATGTCAGACACAAAGTCCTATGTATAGCCTTAATCTGACCATATTCTTCAGTTaGGTGGCACTCTCACTAGAA | + |
Preference number: 5 (lower is better) Translates to: FRDIDTCQTQSPMYSLNLTIFFS*VALSLE Trigger: TTCTAGTGAGAGTGCCACCAAACTGAAGAATATGGT...CAGATTAAGGCTATACATAGGACTTTGTGTCTGACATGTGTCAATATCTCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | CAATGTGTTCAGAGCTCTGGCGAAGGCGCTCTTTCCTaGGCTGTGCTGTGGCACTTCGACTCACCCAGCGAT | + |
Preference number: 6 (lower is better) Translates to: QCVQSSGEGALS*AVLWHFDSPSD Trigger: ATCGCTGGGTGAGTCGAAGTGCCACAGCACAGCGCAGGAAAGAGCGCCTTCGCCAGAGCTCTGAACACATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CCA 72 bp | CACAAGGCAGACTTCCCCTGCTTGACCAGTAAGCCGTaGCTCCATATCCTCTCCAGTAGGTCACACAGGCTG | + |
Preference number: 6 (lower is better) Translates to: HKADFPCLTSKP*LHILSSRSHRL Trigger: CAGCCTGTGTGACCTACTGGAGAGGATATGGAGCCACGGCTTACTGGTCAAGCAGGGGAAGTCTGCCTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | TTCAGAGCTCTGGCGAAGGCGCTCTTTCCTGCGCTGTaGTGTGGCACTTCGACTCACCCAGCGATTGTTATT | + |
Preference number: 6 (lower is better) Translates to: FRALAKALFPAL*CGTSTHPAIVI Trigger: AATAACAATCGCTGGGTGAGTCGAAGTGCCACAGCACAGCGCAGGAAAGAGCGCCTTCGCCAGAGCTCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CCA 72 bp | CGGTTGGCAAAGACCTCTCGCAGCTGTACATTGAGCTaGGAGTCCCTCAAGTCGGCCTCTTCACACTGCAAT | + |
Preference number: 6 (lower is better) Translates to: RLAKTSRSCTLS*ESLKSASSHCN Trigger: ATTGCAGTGTGAAGAGGCCGACTTGAGGGACTCCCAGCTCAATGTACAGCTGCGAGAGGTCTTTGCCAACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 72 bp | GTAAAGCGGTTGGCAAAGACCTCTCGCAGCTGTACATaGAGCTGGGAGTCCCTCAAGTCGGCCTCTTCACAC | + |
Preference number: 6 (lower is better) Translates to: VKRLAKTSRSCT*SWESLKSASSH Trigger: GTGTGAAGAGGCCGACTTGAGGGACTCCCAGCTCAATGTACAGCTGCGAGAGGTCTTTGCCAACCGCTTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CCA 72 bp | ACTCAGTCTCCTGGTTGTCGTGGGAGATTTCTGCTGTaGTGGAGTCCGACACTGCTTTCCCAGGTCTTCATC | + |
Preference number: 6 (lower is better) Translates to: TQSPGCRGRFLL*WSPTLLSQVFI Trigger: GATGAAGACCTGGGAAAGCAGTGTCGGACTCCACCACAGCAGAAATCTCCCACGACAACCAGGAGACTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 72 bp | AGCTTCTTGGTCAGTGGCTGGTTAGAGAGCAGCTGCTaGAGGTGCTGCGACAAGAGCTTCTTTTCCAGGGAC | + |
Preference number: 6 (lower is better) Translates to: SFLVSGWLESSC*RCCDKSFFSRD Trigger: GTCCCTGGAAAAGAAGCTCTTGTCGCAGCACCTCAAGCAGCTGCTCTCTAACCAGCCACTGACCAAGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 72 bp | GGCAAGGGTGGTGGCTGCTGTGAGGTAACTGCCTTGTaGAGTTGGAAGAGGAATTTCTTGCAGGCTTGCATG | + |
Preference number: 6 (lower is better) Translates to: GKGGGCCEVTAL*SWKRNFLQACM Trigger: CATGCAAGCCTGCAAGAAATTCCTCTTCCAACTTCACAAGGCAGTTACCTCACAGCAGCCACCACCCTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | GTCGTGGGAGATTTCTGCTGTGGTGGAGTCCGACACTaGTTTCCCAGGTCTTCATCTGAAGCTGATGTCATC | + |
Preference number: 6 (lower is better) Translates to: VVGDFCCGGVRH*FPRSSSEADVI Trigger: GATGACATCAGCTTCAGATGAAGACCTGGGAAAGCAGTGTCGGACTCCACCACAGCAGAAATCTCCCACGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | GTAATACTCAGTCTCCTGGTTGTCGTGGGAGATTTCTaGTGTGGTGGAGTCCGACACTGCTTTCCCAGGTCT | + |
Preference number: 6 (lower is better) Translates to: VILSLLVVVGDF*CGGVRHCFPRS Trigger: AGACCTGGGAAAGCAGTGTCGGACTCCACCACAGCAGAAATCTCCCACGACAACCAGGAGACTGAGTATTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 72 bp | ACCTTATCCACGCCCGCGCCCGTCCAACGTCAGTCTTaGTCTCAGTCATGTTCTGAATATGCCTCATGTCTT | + |
Preference number: 6 (lower is better) Translates to: TLSTPAPVQRQS*SQSCSEYASCL Trigger: AAGACATGAGGCATATTCAGAACATGACTGAGATCAAGACTGACGTTGGACGGGCGCGGGCGTGGATAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | GGCTGGTCAGAGAGAAAAGAAGCTTTGTCAAAGTTCTaGATCTGTTCCCGGTTGGTCAGCCAGGACTCCATG | + |
Preference number: 6 (lower is better) Translates to: GWSERKEALSKF*ICSRLVSQDSM Trigger: CATGGAGTCCTGGCTGACCAACCGGGAACAGATGCAGAACTTTGACAAAGCTTCTTTTCTCTCTGACCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CCA 72 bp | AAGAAGCTTTGTCAAAGTTCTGCATCTGTTCCCGGTTaGTCAGCCAGGACTCCATGTCCTGGGCAGTCTGAA | + |
Preference number: 6 (lower is better) Translates to: KKLCQSSASVPG*SARTPCPGQSE Trigger: TTCAGACTGCCCAGGACATGGAGTCCTGGCTGACCAACCGGGAACAGATGCAGAACTTTGACAAAGCTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 90 bp | AACATCTGTGTAAAGCGGTTGGCAAAGACCTCTCGCAGCTGTACATaGAGCTGGGAGTCCCTCAAGTCGGCCTCTTCACACTGCAATTTT | + |
Preference number: 6 (lower is better) Translates to: NICVKRLAKTSRSCT*SWESLKSASSHCNF Trigger: AAAATTGCAGTGTGAAGAGGCCGACTTGAGGGACTCCCAGCTCAATGTACAGCTGCGAGAGGTCTTTGCCAACCGCTTTACACAGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 90 bp | CTGTGGCACTTCGACTCACCCAGCGATTGTTATTGGCTGGTCCTGTaGCCAAGACATCGGACTGTAACTTTGGAAAGAACCCTTGCTCAT | + |
Preference number: 6 (lower is better) Translates to: LWHFDSPSDCYWLVL*PRHRTVTLERTLAH Trigger: ATGAGCAAGGGTTCTTTCCAAAGTTACAGTCCGATGTCTTGGCAACAGGACCAGCCAATAACAATCGCTGGGTGAGTCGAAGTGCCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | CTCCCTCGTCAATACTACTTGCCAGTGAGTCCATACTaGAAGAGGATGAAGCGTACACACTGCTGTACTGCT | + |
Preference number: 6 (lower is better) Translates to: LPRQYYLPVSPY*KRMKRTHCCTA Trigger: AGCAGTACAGCAGTGTGTACGCTTCATCCTCTTGCAGTATGGACTCACTGGCAAGTAGTATTGACGAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | GGCAGATTTGAACCCATGATGGAAAACTTGTTCAAGTaGAGCAACCAGGCCATTTTCTCCGCACAGCAGCAC | + |
Preference number: 6 (lower is better) Translates to: GRFEPMMENLFK*SNQAIFSAQQH Trigger: GTGCTGCTGTGCGGAGAAAATGGCCTGGTTGCTGCACTTGAACAAGTTTTCCATCATGGGTTCAAATCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CCA 72 bp | GAGAAAAGCATAGCGCTTATAAAGCTTCTTGGTCAGTaGCTGGTTAGAGAGCAGCTGCTTGAGGTGCTGCGA | + |
Preference number: 6 (lower is better) Translates to: EKSIALIKLLGQ*LVREQLLEVLR Trigger: TCGCAGCACCTCAAGCAGCTGCTCTCTAACCAGCCACTGACCAAGAAGCTTTATAAGCGCTATGCTTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 90 bp | GCTGGAGTTTCAAAAGAGAGGTTGCATCTCCCTCGTCAATACTACTaGCCAGTGAGTCCATACTGCAAGAGGATGAAGCGTACACACTGC | + |
Preference number: 6 (lower is better) Translates to: AGVSKERLHLPRQYY*PVSPYCKRMKRTHC Trigger: GCAGTGTGTACGCTTCATCCTCTTGCAGTATGGACTCACTGGCAAGTAGTATTGACGAGGGAGATGCAACCTCTCTTTTGAAACTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | GGCGATCAAGGTGTTTTCTTCCAAGCCAGTAATGTTTaGTTCTCCATGGCCCAGTTCTACTGCTTCATGTCC | + |
Preference number: 6 (lower is better) Translates to: GDQGVFFQASNV*FSMAQFYCFMS Trigger: GGACATGAAGCAGTAGAACTGGGCCATGGAGAAGCAAACATTACTGGCTTGGAAGAAAACACCTTGATCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | GATAAGGGAGTTGACAGTCATGTGGTCTCGAAGCAGTaGATTCTCTTCATACATTCGGGTGATGGCAGGACA | + |
Preference number: 6 (lower is better) Translates to: DKGVDSHVVSKQ*ILFIHSGDGRT Trigger: TGTCCTGCCATCACCCGAATGTATGAAGAGAATGCACTGCTTCGAGACCACATGACTGTCAACTCCCTTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 72 bp | TTCGACTCACCCAGCGATTGTTATTGGCTGGTCCTGTaGCCAAGACATCGGACTGTAACTTTGGAAAGAACC | + |
Preference number: 6 (lower is better) Translates to: FDSPSDCYWLVL*PRHRTVTLERT Trigger: GGTTCTTTCCAAAGTTACAGTCCGATGTCTTGGCAACAGGACCAGCCAATAACAATCGCTGGGTGAGTCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 90 bp | TTCACAGCTTCTCCAATTCCTTCTTGGATCTGTCCAGCATTGGGTTaGGCAGGCTTTCCCGTTAGTGAGGTAATACTCAGTCTCCTGGTT | + |
Preference number: 6 (lower is better) Translates to: FTASPIPSWICPALG*AGFPVSEVILSLLV Trigger: AACCAGGAGACTGAGTATTACCTCACTAACGGGAAAGCCTGCCAAACCCAATGCTGGACAGATCCAAGAAGGAATTGGAGAAGCTGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 90 bp | TCTGAAAGACAGCCCTTTGGGCATGCACAGCATGTTCACTGCATCTaGATCAAAAGGGTTCCATTCTATGTTTTGAGGATAGTGGGCCAG | + |
Preference number: 6 (lower is better) Translates to: SERQPFGHAQHVHCI*IKRVPFYVLRIVGQ Trigger: CTGGCCCACTATCCTCAAAACATAGAATGGAACCCTTTTGATCAAGATGCAGTGAACATGCTGTGCATGCCCAAAGGGCTGTCTTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111557.8 ENSMUST00000127727.2 |
||
CDS TCA 72 bp | CTATGGTCTCACTGCCCTTCAGTAGCTCATACACGCTaGCGCTGTTGTTGGGGACATTTCCATTCTTTTTGT | + |
Preference number: 6 (lower is better) Translates to: LWSHCPSVAHTR*RCCWGHFHSFC Trigger: ACAAAAAGAATGGAAATGTCCCCAACAACAGCGTCAGCGTGTATGAGCTACTGAAGGGCAGTGAGACCATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 72 bp | ATGTCCGCAGGGTGGGTGCCCTTACATTATACAATCTaGTCTTCTCAATCCGAGAATCAAAGACCCGAAGCA | + |
Preference number: 6 (lower is better) Translates to: MSAGWVPLHYTI*SSQSENQRPEA Trigger: TGCTTCGGGTCTTTGATTCTCGGATTGAGAAGATCAGATTGTATAATGTAAGGGCACCCACCCTGCGGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 72 bp | GAGTCTGTGAGGTGCTCTTGTTTCTCTTCTCTATCCTaGAACTGGAGCAAATGTGACCACAAGGCAGACTTC | + |
Preference number: 6 (lower is better) Translates to: ESVRCSCFSSLS*NWSKCDHKADF Trigger: GAAGTCTGCCTTGTGGTCACATTTGCTCCAGTTTCAGGATAGAGAAGAGAAACAAGAGCACCTCACAGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 72 bp | CCTGAAGTTGTATTTGCAGTATCTTGGCTCTTGCCATaGCGATCTGCTTCTAGCCATTGGTACAAAACCGCC | + |
Preference number: 6 (lower is better) Translates to: PEVVFAVSWLLP*RSASSHWYKTA Trigger: GGCGGTTTTGTACCAATGGCTAGAAGCAGATCGTCATGGCAAGAGCCAAGATACTGCAAATACAACTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127727.2 |
||
CDS GCA 72 bp | GATGAAGCGTACACACTGCTGTACTGCTCAGCATTATaGATCTGGTACAGTGTCTGCATGGCTGTACAGATT | + |
Preference number: 6 (lower is better) Translates to: DEAYTLLYCSAL*IWYSVCMAVQI Trigger: AATCTGTACAGCCATGCAGACACTGTACCAGATGCATAATGCTGAGCAGTACAGCAGTGTGTACGCTTCATC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | ATACTGCAAGAGGATGAAGCGTACACACTGCTGTACTaGTCAGCATTATGCATCTGGTACAGTGTCTGCATG | + |
Preference number: 6 (lower is better) Translates to: ILQEDEAYTLLY*SALCIWYSVCM Trigger: CATGCAGACACTGTACCAGATGCATAATGCTGAGCAGTACAGCAGTGTGTACGCTTCATCCTCTTGCAGTAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | AATCTGGAATTTGCCGTCCTTCCCAATGTTCCTGGGTaGAGTGTTAATAGCATTCACGTAGTGGCAGAAGGT | + |
Preference number: 6 (lower is better) Translates to: NLEFAVLPNVPG*SVNSIHVVAEG Trigger: ACCTTCTGCCACTACGTGAATGCTATTAACACTGCACCCAGGAACATTGGGAAGGACGGCAAATTCCAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CCA 72 bp | GCGTACACACTGCTGTACTGCTCAGCATTATGCATCTaGTACAGTGTCTGCATGGCTGTACAGATTTGCTTA | + |
Preference number: 6 (lower is better) Translates to: AYTLLYCSALCI*YSVCMAVQICL Trigger: TAAGCAAATCTGTACAGCCATGCAGACACTGTACCAGATGCATAATGCTGAGCAGTACAGCAGTGTGTACGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 72 bp | TCAAAAGAGAGGTTGCATCTCCCTCGTCAATACTACTaGCCAGTGAGTCCATACTGCAAGAGGATGAAGCGT | + |
Preference number: 6 (lower is better) Translates to: SKERLHLPRQYY*PVSPYCKRMKR Trigger: ACGCTTCATCCTCTTGCAGTATGGACTCACTGGCAAGTAGTATTGACGAGGGAGATGCAACCTCTCTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 72 bp | TCTCCAATTCCTTCTTGGATCTGTCCAGCATTGGGTTaGGCAGGCTTTCCCGTTAGTGAGGTAATACTCAGT | + |
Preference number: 6 (lower is better) Translates to: SPIPSWICPALG*AGFPVSEVILS Trigger: ACTGAGTATTACCTCACTAACGGGAAAGCCTGCCAAACCCAATGCTGGACAGATCCAAGAAGGAATTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 72 bp | ACAGCTTCTCCAATTCCTTCTTGGATCTGTCCAGCATaGGGTTTGGCAGGCTTTCCCGTTAGTGAGGTAATA | + |
Preference number: 6 (lower is better) Translates to: TASPIPSWICPA*GLAGFPVSEVI Trigger: TATTACCTCACTAACGGGAAAGCCTGCCAAACCCAATGCTGGACAGATCCAAGAAGGAATTGGAGAAGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 90 bp | ATATTGTTCACAGCTTCTCCAATTCCTTCTTGGATCTGTCCAGCATaGGGTTTGGCAGGCTTTCCCGTTAGTGAGGTAATACTCAGTCTC | + |
Preference number: 6 (lower is better) Translates to: ILFTASPIPSWICPA*GLAGFPVSEVILSL Trigger: GAGACTGAGTATTACCTCACTAACGGGAAAGCCTGCCAAACCCAATGCTGGACAGATCCAAGAAGGAATTGGAGAAGCTGTGAACAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 72 bp | AGTAGAGAAGGGTCTGCATCTCTAAAAGAACACAGGTaGACACTTGCACTAGGTTCTCTAATCCCAGGAGCT | + |
Preference number: 6 (lower is better) Translates to: SREGSASLKEHR*TLALGSLIPGA Trigger: AGCTCCTGGGATTAGAGAACCTAGTGCAAGTGTTCACCTGTGTTCTTTTAGAGATGCAGACCCTTCTCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | CACTCAAAAGTCATCTCAAGCAAGTTCTTTGGAATCTaGATTACTCCGGTGTCTCCCAGCTCTCCTGAAACA | + |
Preference number: 6 (lower is better) Translates to: HSKVISSKFFGI*ITPVSPSSPET Trigger: TGTTTCAGGAGAGCTGGGAGACACCGGAGTAATGCAGATTCCAAAGAACTTGCTTGAGATGACTTTTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 72 bp | TGCCTTGTGAAGTTGGAAGAGGAATTTCTTGCAGGCTaGCATGAAAGGCAGAGGTGTGATCAAGCAGATACT | + |
Preference number: 6 (lower is better) Translates to: CLVKLEEEFLAG*HERQRCDQADT Trigger: AGTATCTGCTTGATCACACCTCTGCCTTTCATGCAAGCCTGCAAGAAATTCCTCTTCCAACTTCACAAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 72 bp | CTTCACAATATTGTTCACAGCTTCTCCAATTCCTTCTaGGATCTGTCCAGCATTGGGTTTGGCAGGCTTTCC | + |
Preference number: 6 (lower is better) Translates to: LHNIVHSFSNSF*DLSSIGFGRLS Trigger: GGAAAGCCTGCCAAACCCAATGCTGGACAGATCCAAGAAGGAATTGGAGAAGCTGTGAACAATATTGTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 90 bp | ATGGTCTCACTGCCCTTCAGTAGCTCATACACGCTGACGCTGTTGTaGGGGACATTTCCATTCTTTTTGTCATTAGCCAAATCTTTCAGA | + |
Preference number: 6 (lower is better) Translates to: MVSLPFSSSYTLTLL*GTFPFFLSLAKSFR Trigger: TCTGAAAGATTTGGCTAATGACAAAAAGAATGGAAATGTCCCCAACAACAGCGTCAGCGTGTATGAGCTACTGAAGGGCAGTGAGACCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 72 bp | AATAAAGGTGGCAAACATCTGTGTTTCAATGAAGCGTaGAAGAAATGGCAGGTAAGGCTCAGGCTGGTCAGA | + |
Preference number: 6 (lower is better) Translates to: NKGGKHLCFNEA*KKWQVRLRLVR Trigger: TCTGACCAGCCTGAGCCTTACCTGCCATTTCTTTCACGCTTCATTGAAACACAGATGTTTGCCACCTTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | GAAAGACAGCCCTTTGGGCATGCACAGCATGTTCACTaGATCTTGATCAAAAGGGTTCCATTCTATGTTTTG | + |
Preference number: 6 (lower is better) Translates to: ERQPFGHAQHVH*ILIKRVPFYVL Trigger: CAAAACATAGAATGGAACCCTTTTGATCAAGATGCAGTGAACATGCTGTGCATGCCCAAAGGGCTGTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111557.8 ENSMUST00000127727.2 |
||
CDS GCA 72 bp | GCTGCATTTCTGATATATAGATGTCCGCAGGGTGGGTaGCCTTACATTATACAATCTGATCTTCTCAATCCG | + |
Preference number: 6 (lower is better) Translates to: AAFLIYRCPQGG*PYIIQSDLLNP Trigger: CGGATTGAGAAGATCAGATTGTATAATGTAAGGGCACCCACCCTGCGGACATCTATATATCAGAAATGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 72 bp | CAGCCCTTTGGGCATGCACAGCATGTTCACTGCATCTaGATCAAAAGGGTTCCATTCTATGTTTTGAGGATA | + |
Preference number: 6 (lower is better) Translates to: QPFGHAQHVHCI*IKRVPFYVLRI Trigger: TATCCTCAAAACATAGAATGGAACCCTTTTGATCAAGATGCAGTGAACATGCTGTGCATGCCCAAAGGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111557.8 ENSMUST00000127727.2 |
||
CDS TCA 72 bp | CGTAGTGGCAGAAGGTTTTGCTTGATGGTTTCTGAATaGGCACATCACCTTCATTGTCTAAAATCTGGTCAG | + |
Preference number: 6 (lower is better) Translates to: RSGRRFCLMVSE*AHHLHCLKSGQ Trigger: CTGACCAGATTTTAGACAATGAAGGTGATGTGCTCATTCAGAAACCATCAAGCAAAACCTTCTGCCACTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | CTGTACTGCTCAGCATTATGCATCTGGTACAGTGTCTaGATGGCTGTACAGATTTGCTTACTTGTAACTTCT | + |
Preference number: 6 (lower is better) Translates to: LYCSALCIWYSV*MAVQICLLVTS Trigger: AGAAGTTACAAGTAAGCAAATCTGTACAGCCATGCAGACACTGTACCAGATGCATAATGCTGAGCAGTACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 72 bp | TCAAAGACCCGAAGCAGAGGGTCTTTCTCTTCCCATTaGGACATGATCTTATTATCAATAAAGGTGGCAAAC | + |
Preference number: 6 (lower is better) Translates to: SKTRSRGSFSSH*DMILLSIKVAN Trigger: GTTTGCCACCTTTATTGATAATAAGATCATGTCTCAATGGGAAGAGAAAGACCCTCTGCTTCGGGTCTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | TTTCACCTGAAGTTGTATTTGCAGTATCTTGGCTCTTaGCATGACGATCTGCTTCTAGCCATTGGTACAAAA | + |
Preference number: 6 (lower is better) Translates to: FHLKLYLQYLGS*HDDLLLAIGTK Trigger: TTTTGTACCAATGGCTAGAAGCAGATCGTCATGGCAAGAGCCAAGATACTGCAAATACAACTTCAGGTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127727.2 |
||
CDS CAA 90 bp | GATTGTTATTGGCTGGTCCTGTTGCCAAGACATCGGACTGTAACTTaGGAAAGAACCCTTGCTCATATTTGCCTTGACCAATTTTCATAT | + |
Preference number: 6 (lower is better) Translates to: DCYWLVLLPRHRTVT*ERTLAHICLDQFSY Trigger: ATATGAAAATTGGTCAAGGCAAATATGAGCAAGGGTTCTTTCCAAAGTTACAGTCCGATGTCTTGGCAACAGGACCAGCCAATAACAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS GCA 72 bp | CGGACTGTAACTTTGGAAAGAACCCTTGCTCATATTTaGCTTGACCAATTTTCATATCAAGTAGATGTGGGT | + |
Preference number: 6 (lower is better) Translates to: RTVTLERTLAHI*LDQFSYQVDVG Trigger: ACCCACATCTACTTGATATGAAAATTGGTCAAGGCAAATATGAGCAAGGGTTCTTTCCAAAGTTACAGTCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 72 bp | ATGCATCTGGTACAGTGTCTGCATGGCTGTACAGATTaGCTTACTTGTAACTTCTTCATAGAAAGTGAGAAC | + |
Preference number: 6 (lower is better) Translates to: MHLVQCLHGCTD*LTCNFFIESEN Trigger: GTTCTCACTTTCTATGAAGAAGTTACAAGTAAGCAAATCTGTACAGCCATGCAGACACTGTACCAGATGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 90 bp | CTCAGCATTATGCATCTGGTACAGTGTCTGCATGGCTGTACAGATTaGCTTACTTGTAACTTCTTCATAGAAAGTGAGAACAAAACCATA | + |
Preference number: 6 (lower is better) Translates to: LSIMHLVQCLHGCTD*LTCNFFIESENKTI Trigger: TATGGTTTTGTTCTCACTTTCTATGAAGAAGTTACAAGTAAGCAAATCTGTACAGCCATGCAGACACTGTACCAGATGCATAATGCTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 72 bp | CATGAAAGGCAGAGGTGTGATCAAGCAGATACTTTTTaGAACATACAAGGTGTCTCTGTTGATGTCATAAGA | + |
Preference number: 6 (lower is better) Translates to: HERQRCDQADTF*NIQGVSVDVIR Trigger: TCTTATGACATCAACAGAGACACCTTGTATGTTTCAAAAAGTATCTGCTTGATCACACCTCTGCCTTTCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 72 bp | AGCAGATACTTTTTGAAACATACAAGGTGTCTCTGTTaGTGTCATAAGAGTTGTATCGCTGGAGTTTCAAAA | + |
Preference number: 6 (lower is better) Translates to: SRYFLKHTRCLC*CHKSCIAGVSK Trigger: TTTTGAAACTCCAGCGATACAACTCTTATGACATCAACAGAGACACCTTGTATGTTTCAAAAAGTATCTGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 72 bp | ATTTTCATATCAAGTAGATGTGGGTGGATTGCAGTGTaGTCCATTTTCATCAATCTTTGTTCAATTGACTGG | + |
Preference number: 6 (lower is better) Translates to: IFISSRCGWIAV*SIFINLCSIDW Trigger: CCAGTCAATTGAACAAAGATTGATGAAAATGGATCACACTGCAATCCACCCACATCTACTTGATATGAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS TCA 72 bp | GATTGCATTGCTCAGCTTTTTAATTGGAATGATCACTaGTCTATAAGGAATCATGATAGTGGTGAACACACT | + |
Preference number: 6 (lower is better) Translates to: DCIAQLFNWNDH*SIRNHDSGEHT Trigger: AGTGTGTTCACCACTATCATGATTCCTTATAGATCAGTGATCATTCCAATTAAAAAGCTGAGCAATGCAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |
||
CDS CAA 72 bp | CTTGACCAATTTTCATATCAAGTAGATGTGGGTGGATaGCAGTGTGATCCATTTTCATCAATCTTTGTTCAA | + |
Preference number: 6 (lower is better) Translates to: LDQFSYQVDVGG*QCDPFSSIFVQ Trigger: TTGAACAAAGATTGATGAAAATGGATCACACTGCAATCCACCCACATCTACTTGATATGAAAATTGGTCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111557.8 |