Pregenerated sensors for DENND2D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027901Ensembl transcript IDs: ENSMUST00000029508.11, ENSMUST00000149225.2, ENSMUST00000183271.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCCCACTCATTTCCATCAGGGAAGCAGAACAAAGGGATGGCACTaGGCAACCGGTCCTCCTCCTCCTGCTGACCTCGGAGCAGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: VPTHFHQGSRTKGWH*ATGPPPPADLGAGS Trigger: AGAACCTGCTCCGAGGTCAGCAGGAGGAGGAGGACCGGTTGCTCAGTGCCATCCCTTTGTTCTGCTTCCCTGATGGAAATGAGTGGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR CCA 90 bp | CTGGCCTCCAGCAAAGCTAGATGGAGAATGCTCCTGGATCCTTTCTaGCTCTGTGACAGCTTCCCCAGGATTGTTCTGGGATTGTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LASSKARWRMLLDPF*LCDSFPRIVLGLSW Trigger: CCAGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTCTCCATCTAGCTTTGCTGGAGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR CCA 90 bp | TCAAAGAAGTGCTGGCCTCCAGCAAAGCTAGATGGAGAATGCTCCTaGATCCTTTCTGGCTCTGTGACAGCTTCCCCAGGATTGTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: SKKCWPPAKLDGECS*ILSGSVTASPGLFW Trigger: CCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTCTCCATCTAGCTTTGCTGGAGGCCAGCACTTCTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR GCA 90 bp | TTAAACAGTCCTAGGCCCCAGCTGCCACCCTTCTGGAGCTGTCTCTaGTCAGAATTCTGGGAAACACACCAGATAGTACAAACTCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: LNSPRPQLPPFWSCL*SEFWETHQIVQTLC Trigger: GCAGAGAGTTTGTACTATCTGGTGTGTTTCCCAGAATTCTGAGCAGAGACAGCTCCAGAAGGGTGGCAGCTGGGGCCTAGGACTGTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR GCA 90 bp | AGGTATTCAAAGAAGTGCTGGCCTCCAGCAAAGCTAGATGGAGAATaGTCCTGGATCCTTTCTGGCTCTGTGACAGCTTCCCCAGGATTG | + |
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Preference number: 1 (lower is better) Translates to: RYSKKCWPPAKLDGE*SWILSGSVTASPGL Trigger: CAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTCTCCATCTAGCTTTGCTGGAGGCCAGCACTTCTTTGAATACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR TCA 90 bp | CCTGCTGACCTCGGAGCAGGTTCTCCCTCTTGGGAAACTGGTAAGTaGTCGTGGGCTCATAGTCATCCCCTAAACGCTTTTTCTTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: PADLGAGSPSWETGK*SWAHSHPLNAFSLK Trigger: CTTTAAAGAAAAAGCGTTTAGGGGATGACTATGAGCCCACGATCACTTACCAGTTTCCCAAGAGGGAGAACCTGCTCCGAGGTCAGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR CCA 90 bp | GGAATTCTCCTATTAAACAGTCCTAGGCCCCAGCTGCCACCCTTCTaGAGCTGTCTCTGCTCAGAATTCTGGGAAACACACCAGATAGTA | + |
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Preference number: 1 (lower is better) Translates to: GILLLNSPRPQLPPF*SCLCSEFWETHQIV Trigger: TACTATCTGGTGTGTTTCCCAGAATTCTGAGCAGAGACAGCTCCAGAAGGGTGGCAGCTGGGGCCTAGGACTGTTTAATAGGAGAATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR CCA 90 bp | AACAAGAAGGTATTCAAAGAAGTGCTGGCCTCCAGCAAAGCTAGATaGAGAATGCTCCTGGATCCTTTCTGGCTCTGTGACAGCTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: NKKVFKEVLASSKAR*RMLLDPFWLCDSFP Trigger: GGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTCTCCATCTAGCTTTGCTGGAGGCCAGCACTTCTTTGAATACCTTCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR TCA 90 bp | AGCTTTGAGTACAGTTCTGAGTTTGGATGTGAGCTTTCAAAGTTCTaGGAAGCCCTGACACCAAGGCTCCCAGATTCACACACCACTTTG | + |
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Preference number: 1 (lower is better) Translates to: SFEYSSEFGCELSKF*EALTPRLPDSHTTL Trigger: CAAAGTGGTGTGTGAATCTGGGAGCCTTGGTGTCAGGGCTTCTCAGAACTTTGAAAGCTCACATCCAAACTCAGAACTGTACTCAAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| 3UTR TCA 90 bp | TGCTCAGAATTCTGGGAAACACACCAGATAGTACAAACTCTCTGCTaGGGCCATTCTGATCAAGATCTCTTACTCTTCTTATGGGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: CSEFWETHQIVQTLC*GHSDQDLLLFLWEV Trigger: CACTTCCCATAAGAAGAGTAAGAGATCTTGATCAGAATGGCCTCAGCAGAGAGTTTGTACTATCTGGTGTGTTTCCCAGAATTCTGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR CCA 90 bp | CTGTGTATGTTTCCTTTGGTCAAAGATACTACAAGCATCAGCCAATaGTTTCTTTGTAGAAAGACACAGCTGGCCCTGGTTGTTGAATTC | + |
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Preference number: 1 (lower is better) Translates to: LCMFPLVKDTTSISQ*FLCRKTQLALVVEF Trigger: GAATTCAACAACCAGGGCCAGCTGTGTCTTTCTACAAAGAAACCATTGGCTGATGCTTGTAGTATCTTTGACCAAAGGAAACATACACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR CCA 90 bp | TTTCATCTTTATTCTCATCCTCACGTCAGACCACTATTTTGTACATaGGTCATTGGGCCAGTGTTCTGTATTGAGGATTTTATAACAGAG | + |
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Preference number: 1 (lower is better) Translates to: FHLYSHPHVRPLFCT*VIGPVFCIEDFITE Trigger: CTCTGTTATAAAATCCTCAATACAGAACACTGGCCCAATGACCCATGTACAAAATAGTGGTCTGACGTGAGGATGAGAATAAAGATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| 3UTR-3UTR CCA 90 bp | CAACCGGTCCTCCTCCTCCTGCTGACCTCGGAGCAGGTTCTCCCTCTTGGGAAACTCCTGGATCCTTTCTaGCTCTGTGACAGCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: QPVLLLLLTSEQVLPLGKLLDPF*LCDSFP Trigger: GGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAG...TTTCCCAAGAGGGAGAACCTGCTCCGAGGTCAGCAGGAGGAGGAGGACCGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGTCTCCCTGGGATACTCTGTGAGTGGTGCCCACTCATTTCCATCAGGGAAAGGTATTCAAAGAAGTaGTGGCCTCCAGCAAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: EGLPGILCEWCPLISIRERYSKK*WPPAKL Trigger: TAGCTTTGCTGGAGGCCAGCACTTCTTTGAATACCT...TTCCCTGATGGAAATGAGTGGGCACCACTCACAGAGTATCCCAGGGAGACCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCCACTCTGTTGGAAGAAGGCCATaGATTCCAGGGCCGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: KHPQQLYTCTTISHYVHSVGRRP*IPGPKT Trigger: GGTCTTCGGCCCTGGAATCCATGGCCTTCTTCCAAC...AGAGTGGACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATTGAGACCTCAATTGGCTACCAGTTGTCACACAGTATTGCTACATTTGAGGGGGCGGGGGTGGTGTaGTCTGAACAGGATCCCACA | + |
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Preference number: 2 (lower is better) Translates to: EIETSIGYQLSHSIATFEGAGVV*SEQDPT Trigger: TGTGGGATCCTGTTCAGACCACACCACCCCCGCCCC...CTCAAATGTAGCAATACTGTGTGACAACTGGTAGCCAATTGAGGTCTCAATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR TCA 90 bp | CAACTTCTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACGGCCGAAGACCTCACTaGTTCTGTCCCACTAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: QLLIKHPQQLYTCTTISHGRRPH*FCPTRR Trigger: CCTTCTAGTGGGACAGAATCAGTGAGGTCTTCGGCC...GTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAGAAGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAATTGTTCAGATGGGGTGGAGGTGGGTTGTCACTTTGTACTCTCCATTTTGAGTTCTGAGAAGCCCTaGCACCAAGGCTCCCAGATT | + |
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Preference number: 2 (lower is better) Translates to: SNCSDGVEVGCHFVLSILSSEKP*HQGSQI Trigger: AATCTGGGAGCCTTGGTGTCAGGGCTTCTCAGAACT...CAAAATGGAGAGTACAAAGTGACAACCCACCTCCACCCCATCTGAACAATTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR CCA 90 bp | AATGCAGCTTTGAGTACAGTTCTGAGTTTGGATGTGAGCTTTCAAAGTTCTGAGGTTGGAAGAAGGCCATaGATTCCAGGGCCGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: NAALSTVLSLDVSFQSSEVGRRP*IPGPKT Trigger: GGTCTTCGGCCCTGGAATCCATGGCCTTCTTCCAAC...CTCAGAACTTTGAAAGCTCACATCCAAACTCAGAACTGTACTCAAAGCTGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGGCCCTGGTTGTTGAATTCACATACTTAATGAAGTATCAGAATCATTCAGGCCGAAGACCTCACTaGTTCTGTCCCACTAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: QLALVVEFTYLMKYQNHSGRRPH*FCPTRR Trigger: CCTTCTAGTGGGACAGAATCAGTGAGGTCTTCGGCC...TGAATGATTCTGATACTTCATTAAGTATGTGAATTCAACAACCAGGGCCAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR TCA 90 bp | CTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCGAGCTTTCAAAGTTCTaGGAAGCCCTGACACCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LIKHPQQLYTCTTISHYVELSKF*EALTPR Trigger: CCTTGGTGTCAGGGCTTCTCAGAACTTTGAAAGCTC...GACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTCAGATGGGGTGGAGGTGGGTTGTCACTTTGTACTCTCCATTTTGGTATTTCTGGTCCTCAGGCTaGAACTTTTCAAGACCTAAG | + |
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Preference number: 2 (lower is better) Translates to: IVQMGWRWVVTLYSPFWYFWSSG*NFSRPK Trigger: CTTAGGTCTTGAAAAGTTTCAGCCTGAGGACCAGAA...ATACCAAAATGGAGAGTACAAAGTGACAACCCACCTCCACCCCATCTGAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR TCA 90 bp | CTATTTTGTACATGGGTCATTGGGCCAGTGTTCTGTATTGAGGATTTTATAACAAGTTCTGAGAAGCCCTaGCACCAAGGCTCCCAGATT | + |
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Preference number: 2 (lower is better) Translates to: LFCTWVIGPVFCIEDFITSSEKP*HQGSQI Trigger: AATCTGGGAGCCTTGGTGTCAGGGCTTCTCAGAACT...TGTTATAAAATCCTCAATACAGAACACTGGCCCAATGACCCATGTACAAAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGCCCTGGTTGTTGAATTCACATACTTAATGAAGTATCAGAATCATTCACTCTTACTCTTCTTATaGGAAGTGGAGCTGCTGACC | + |
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Preference number: 2 (lower is better) Translates to: QLALVVEFTYLMKYQNHSLLLFL*EVELLT Trigger: GGTCAGCAGCTCCACTTCCCATAAGAAGAGTAAGAG...TGAATGATTCTGATACTTCATTAAGTATGTGAATTCAACAACCAGGGCCAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTAGAAAGACACAGCTGGCCCTGGTTGTTGAATTCACATACTTAATGAAGTGCAGTAGGAGTTTGTaGTCTCCAAATCAGAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: LCRKTQLALVVEFTYLMKCSRSL*SPNQSV Trigger: TACACTCTGATTTGGAGATCACAAACTCCTACTGCA...CTTCATTAAGTATGTGAATTCAACAACCAGGGCCAGCTGTGTCTTTCTACAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTCAGATGGGGTGGAGGTGGGTTGTCACTTTGTACTCTCCATTTTGGTATTATAAAGATAATCTCTaGCAAGGCAGGAGAAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: IVQMGWRWVVTLYSPFWYYKDNL*QGRRKK Trigger: CTTCTTTCTCCTGCCTTGTCAGAGATTATCTTTATA...ATACCAAAATGGAGAGTACAAAGTGACAACCCACCTCCACCCCATCTGAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR TCA 90 bp | GAAATTGAGACCTCAATTGGCTACCAGTTGTCACACAGTATTGCTACATTTGAGCAGTGCCTCCTAGATTaGCAAATAACAAGGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: EIETSIGYQLSHSIATFEQCLLD*QITRFS Trigger: TGAAAACCTTGTTATTTGTCAATCTAGGAGGCACTG...CTCAAATGTAGCAATACTGTGTGACAACTGGTAGCCAATTGAGGTCTCAATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGGCCCTGGTTGTTGAATTCACATACTTAATGAAGTATCAGAATCATTCAATGATTCCTAGAAGTTaGAGAAGTAGTAGTTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: QLALVVEFTYLMKYQNHSMIPRS*RSSSWA Trigger: TGCCCAACTACTACTTCTGCAACTTCTAGGAATCAT...TGAATGATTCTGATACTTCATTAAGTATGTGAATTCAACAACCAGGGCCAGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR CCA 90 bp | AATCTGAAAAACACTGTGTATGTTTCCTTTGGTCAAAGATACTACAAGCATCAGATAATGGGGAAAAACTaGCAGTGCAGGGATTGTTCG | + |
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Preference number: 2 (lower is better) Translates to: NLKNTVYVSFGQRYYKHQIMGKN*QCRDCS Trigger: CGAACAATCCCTGCACTGCCAGTTTTTCCCCATTAT...CTGATGCTTGTAGTATCTTTGACCAAAGGAAACATACACAGTGTTTTTCAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR CCA 90 bp | GAAATTGAGACCTCAATTGGCTACCAGTTGTCACACAGTATTGCTACATTTGAGACAAGCATCAGCCAATaGTTTCTTTGTAGAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: EIETSIGYQLSHSIATFETSISQ*FLCRKT Trigger: TGTCTTTCTACAAAGAAACCATTGGCTGATGCTTGT...CTCAAATGTAGCAATACTGTGTGACAACTGGTAGCCAATTGAGGTCTCAATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGAATCTGAAAAACACTGTGTATGTTTCCTTTGGTCAAAGATACTACAAGATTCACACACCACTTTaGAGTAAGACTGCATTATCA | + |
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Preference number: 2 (lower is better) Translates to: QRNLKNTVYVSFGQRYYKIHTPL*SKTALS Trigger: TGATAATGCAGTCTTACTTCAAAGTGGTGTGTGAAT...CTTGTAGTATCTTTGACCAAAGGAAACATACACAGTGTTTTTCAGATTCCTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR TCA 90 bp | AATCTGAAAAACACTGTGTATGTTTCCTTTGGTCAAAGATACTACAAGCATCAGGCCAGTGTTCTGTATTaGGGATTTTATAACAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: NLKNTVYVSFGQRYYKHQASVLY*GFYNRG Trigger: ACCTCTGTTATAAAATCCTCAATACAGAACACTGGC...CTGATGCTTGTAGTATCTTTGACCAAAGGAAACATACACAGTGTTTTTCAGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR CAA 90 bp | GCAGGAGAAAGAAGAGGTAATCCTCCATTAGTACAGTTATATCTATaGTTTTATTTGATTAGTTCAGCAGACCTAACAGGTGTTTATACC | + |
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Preference number: 2 (lower is better) Translates to: AGERRGNPPLVQLYL*FYLISSADLTGVYT Trigger: GGTATAAACACCTGTTAGGTCTGCTGAACTAATCAAATAAAACAATAGATATAACTGTACTAATGGAGGATTACCTCTTCTTTCTCCTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR TCA 72 bp | CATTTCCATCAGGGAAGCAGAACAAAGGGATGGCACTaGGCAACCGGTCCTCCTCCTCCTGCTGACCTCGGA | + |
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Preference number: 3 (lower is better) Translates to: HFHQGSRTKGWH*ATGPPPPADLG Trigger: TCCGAGGTCAGCAGGAGGAGGAGGACCGGTTGCTCAGTGCCATCCCTTTGTTCTGCTTCCCTGATGGAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR CCA 72 bp | TGCTGGCCTCCAGCAAAGCTAGATGGAGAATGCTCCTaGATCCTTTCTGGCTCTGTGACAGCTTCCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: CWPPAKLDGECS*ILSGSVTASPG Trigger: TCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTCTCCATCTAGCTTTGCTGGAGGCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR GCA 72 bp | CCTAGGCCCCAGCTGCCACCCTTCTGGAGCTGTCTCTaGTCAGAATTCTGGGAAACACACCAGATAGTACAA | + |
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Preference number: 3 (lower is better) Translates to: PRPQLPPFWSCL*SEFWETHQIVQ Trigger: TTGTACTATCTGGTGTGTTTCCCAGAATTCTGAGCAGAGACAGCTCCAGAAGGGTGGCAGCTGGGGCCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR GCA 72 bp | AAGAAGTGCTGGCCTCCAGCAAAGCTAGATGGAGAATaGTCCTGGATCCTTTCTGGCTCTGTGACAGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: KKCWPPAKLDGE*SWILSGSVTAS Trigger: GGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTCTCCATCTAGCTTTGCTGGAGGCCAGCACTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR CCA 72 bp | CTATTAAACAGTCCTAGGCCCCAGCTGCCACCCTTCTaGAGCTGTCTCTGCTCAGAATTCTGGGAAACACAC | + |
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Preference number: 3 (lower is better) Translates to: LLNSPRPQLPPF*SCLCSEFWETH Trigger: GTGTGTTTCCCAGAATTCTGAGCAGAGACAGCTCCAGAAGGGTGGCAGCTGGGGCCTAGGACTGTTTAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR CCA 72 bp | AGCAAAGCTAGATGGAGAATGCTCCTGGATCCTTTCTaGCTCTGTGACAGCTTCCCCAGGATTGTTCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: SKARWRMLLDPF*LCDSFPRIVLG Trigger: TCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTCTCCATCTAGCTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR CCA 72 bp | GTATTCAAAGAAGTGCTGGCCTCCAGCAAAGCTAGATaGAGAATGCTCCTGGATCCTTTCTGGCTCTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: VFKEVLASSKAR*RMLLDPFWLCD Trigger: GTCACAGAGCCAGAAAGGATCCAGGAGCATTCTCCATCTAGCTTTGCTGGAGGCCAGCACTTCTTTGAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR TCA 72 bp | TACAGTTCTGAGTTTGGATGTGAGCTTTCAAAGTTCTaGGAAGCCCTGACACCAAGGCTCCCAGATTCACAC | + |
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Preference number: 3 (lower is better) Translates to: YSSEFGCELSKF*EALTPRLPDSH Trigger: GTGTGAATCTGGGAGCCTTGGTGTCAGGGCTTCTCAGAACTTTGAAAGCTCACATCCAAACTCAGAACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| 3UTR TCA 72 bp | GGCGTGTGGAAATTTCCCACCTGCAGTAGGAGTTTGTaGTCTCCAAATCAGAGTGTAACCTTCCCTTTTGTA | + |
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Preference number: 3 (lower is better) Translates to: GVWKFPTCSRSL*SPNQSVTFPFV Trigger: TACAAAAGGGAAGGTTACACTCTGATTTGGAGATCACAAACTCCTACTGCAGGTGGGAAATTTCCACACGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR-3UTR CAA 90 bp | AAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCCACTCTAGTACAGTTCTGAGTTaGGATGTGAGCTTTCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: KHPQQLYTCTTISHYVHSSTVLS*DVSFQS Trigger: ACTTTGAAAGCTCACATCCAAACTCAGAACTGTACT...AGAGTGGACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| 3UTR CCA 72 bp | TTTCCTTTGGTCAAAGATACTACAAGCATCAGCCAATaGTTTCTTTGTAGAAAGACACAGCTGGCCCTGGTT | + |
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Preference number: 3 (lower is better) Translates to: FPLVKDTTSISQ*FLCRKTQLALV Trigger: AACCAGGGCCAGCTGTGTCTTTCTACAAAGAAACCATTGGCTGATGCTTGTAGTATCTTTGACCAAAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| 3UTR CCA 72 bp | TTTAAAGAAACAACAAGAAGGTATTCAAAGAAGTGCTaGCCTCCAGCAAAGCTAGATGGAGAATGCTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: FKETTRRYSKKC*PPAKLDGECSW Trigger: CCAGGAGCATTCTCCATCTAGCTTTGCTGGAGGCCAGCACTTCTTTGAATACCTTCTTGTTGTTTCTTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| 3UTR CCA 72 bp | TATTCTCATCCTCACGTCAGACCACTATTTTGTACATaGGTCATTGGGCCAGTGTTCTGTATTGAGGATTTT | + |
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Preference number: 3 (lower is better) Translates to: YSHPHVRPLFCT*VIGPVFCIEDF Trigger: AAAATCCTCAATACAGAACACTGGCCCAATGACCCATGTACAAAATAGTGGTCTGACGTGAGGATGAGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| 3UTR CCA 72 bp | CCCATTATTTCAGTAATTGTTCAGATGGGGTGGAGGTaGGTTGTCACTTTGTACTCTCCATTTTGGTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: PIISVIVQMGWR*VVTLYSPFWYL Trigger: TAAATACCAAAATGGAGAGTACAAAGTGACAACCCACCTCCACCCCATCTGAACAATTACTGAAATAATGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAAAGCCTAGGTAAACTACTAAATACCATAATGGGGAAAAACTGGCAGTGCAGTACAGTTCTGAGTTaGGATGTGAGCTTTCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KESLGKLLNTIMGKNWQCSTVLS*DVSFQS Trigger: ACTTTGAAAGCTCACATCCAAACTCAGAACTGTACT...GCACTGCCAGTTTTTCCCCATTATGGTATTTAGTAGTTTACCTAGGCTTTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| 3UTR CCA 72 bp | ACAGAGGAATCTGAAAAACACTGTGTATGTTTCCTTTaGTCAAAGATACTACAAGCATCAGCCAATGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: TEESEKHCVCFL*SKILQASANGF Trigger: GAAACCATTGGCTGATGCTTGTAGTATCTTTGACCAAAGGAAACATACACAGTGTTTTTCAGATTCCTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| 3UTR-3UTR CAA 90 bp | AATCTGAAAAACACTGTGTATGTTTCCTTTGGTCAAAGATACTACAAGCATCAGGCAGTGCCTCCTAGATaGACAAATAACAAGGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: NLKNTVYVSFGQRYYKHQAVPPR*TNNKVF Trigger: GAAAACCTTGTTATTTGTCAATCTAGGAGGCACTGC...CTGATGCTTGTAGTATCTTTGACCAAAGGAAACATACACAGTGTTTTTCAGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR GCA 90 bp | ACCGGTCCTCCTCCTCCTGCTGACCTCGGAGCAGGTTCTCCCTCTTGGGAAACTTGTGGCACGGTTATCTaGAAGGCAGGGACAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGPPPPADLGAGSPSWETCGTVI*KAGTSW Trigger: CCAGCTTGTCCCTGCCTTGCAGATAACCGTGCCACA...AGTTTCCCAAGAGGGAGAACCTGCTCCGAGGTCAGCAGGAGGAGGAGGACCGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
||
| CDS-3UTR CCA 90 bp | CCACTCATTTCCATCAGGGAAGCAGAACAAAGGGATGGCACTGAGCAACCGGTCTCCTCGGGAACCCGCTaGCCGCGTTTCAGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLISIREAEQRDGTEQPVSSGTR*PRFSLR Trigger: CCTGAGACTGAAACGCGGCCAGCGGGTTCCCGAGGA...GACCGGTTGCTCAGTGCCATCCCTTTGTTCTGCTTCCCTGATGGAAATGAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGGGATGGCACTGAGCAACCGGTCCTCCTCCTCCTGCTGACCTCGGAGGGAGACCAGTTTTTGTaGCACGGTTATCTGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQRDGTEQPVLLLLLTSEGDQFL*HGYLQG Trigger: GCCTTGCAGATAACCGTGCCACAAAAACTGGTCTCC...CTCCGAGGTCAGCAGGAGGAGGAGGACCGGTTGCTCAGTGCCATCCCTTTGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
||
| 3UTR CAA 72 bp | TGGATCCTTTCTGGCTCTGTGACAGCTTCCCCAGGATaGTTCTGGGATTGTCCTGGCTGCTCTACTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WILSGSVTASPG*FWDCPGCSTEV Trigger: GACCTCAGTAGAGCAGCCAGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACCACAGCTTTTACACAAAGGGATGGCACTaGGCAACCGGTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WPVVLAVSLDTPAHHSFYTKGWH*ATGPPP Trigger: AGGAGGAGGACCGGTTGCTCAGTGCCATCCCTTTGT...GTAAAAGCTGTGGTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGGCCAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCAGGTGCAGGAAAGGCTaGCTCTCGGAGACCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGPKSRLACGSSCISRHSRCRKG*LSETLH Trigger: ATGCAAGGTCTCCGAGAGGCAGCCTTTCCTGCACCT...GGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTGGCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGATTCTGTCCCACTAGAAGACTGTCTTTCCAGGTaGAGGAAAGGCTGCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KKAMDSRAEDLTDSVPLEDCLSR*RKGCLS Trigger: CGAGAGGCAGCCTTTCCTGCACCTGGAAAGACAGTC...TTCTAGTGGGACAGAATCAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | GCCGAAGACCTCACTGATTCTGTCCCACTAGAAGGGCCAAAGTCCAGATTGGCCTGGGTAAAGCAGAGCTaGAGCAGCATGGATACACTG | + |
|
Preference number: 4 (lower is better) Translates to: AEDLTDSVPLEGPKSRLAWVKQS*SSMDTL Trigger: CAGTGTATCCATGCTGCTGCAGCTCTGCTTTACCCA...GGCCAATCTGGACTTTGGCCCTTCTAGTGGGACAGAATCAGTGAGGTCTTCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACCACAGCTTTTACCCCTGGGATACTCTGTaGGTGGTGCCCACTCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: WPVVLAVSLDTPAHHSFYPWDTL*VVPTHF Trigger: GAAATGAGTGGGCACCACTCACAGAGTATCCCAGGG...GTAAAAGCTGTGGTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | GCCGAAGACCTCACTGATTCTGTCCCACTAGAAGGGCCAAAGTCCAGATTGGCCACAGCCATGGAGATCTaGTGCCTCTTCTCTACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AEDLTDSVPLEGPKSRLATAMEI*CLFSTS Trigger: TGAAGTAGAGAAGAGGCATCAGATCTCCATGGCTGT...GGCCAATCTGGACTTTGGCCCTTCTAGTGGGACAGAATCAGTGAGGTCTTCGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCATTATCAGTTGGAAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGGATCGTTCTTGGAAATaGCCTTGTCCACTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TALSVGRRPWIPGPKTSLDRSWK*PCPLAS Trigger: GGAGGCCAGTGGACAAGGTCATTTCCAAGAACGATC...CAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTTCCAACTGATAATGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACCACAGCTTTTACAGGTGCAGGAAAGGCTaGCTCTCGGAGACCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WPVVLAVSLDTPAHHSFYRCRKG*LSETLH Trigger: ATGCAAGGTCTCCGAGAGGCAGCCTTTCCTGCACCT...GTAAAAGCTGTGGTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACCACAGCTTTTACCTGCAGGAGGGTTCCTaGTCTTCTCTGCTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WPVVLAVSLDTPAHHSFYLQEGS*SSLLPG Trigger: TCCAGGAAGCAGAGAAGAGCAGGAACCCTCCTGCAG...GTAAAAGCTGTGGTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACCTCCTGGATCCTTTCTaGCTCTGTGACAGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSPDWPVVLAVSLDTPAHLLDPF*LCDSFP Trigger: GGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAG...GTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACCACAGCTTTTACTCCTTTCTGGCTCTGTaGCAGCTTCCCCAGGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: WPVVLAVSLDTPAHHSFYSFLAL*QLPQDC Trigger: ACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGA...GTAAAAGCTGTGGTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACGATCGTTCTTGGAAATaGCCTTGTCCACTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSPDWPVVLAVSLDTPAHDRSWK*PCPLAS Trigger: GGAGGCCAGTGGACAAGGTCATTTCCAAGAACGATC...GTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | GCCGAAGACCTCACTGATTCTGTCCCACTAGAAGGGCCAAAGTCCAGATTGGCCTCTCTGCTTCCTGGATaGATAGGGAGAAAAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AEDLTDSVPLEGPKSRLASLLPG*IGRKVV Trigger: CACAACTTTTCTCCCTATTCATCCAGGAAGCAGAGA...GGCCAATCTGGACTTTGGCCCTTCTAGTGGGACAGAATCAGTGAGGTCTTCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGTTGGAAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGATTCTGTCCTTTTGGAAGTAGCCTaGAGGAGGGTTCCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISWKKAMDSRAEDLTDSVLLEVA*RRVPAL Trigger: AAGAGCAGGAACCCTCCTGCAGGCTACTTCCAAAAG...GACAGAATCAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTTCCAACTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGATTCTGTCCCACTAGAACTTTTGGAAGTAGCCTaGAGGAGGGTTCCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKAMDSRAEDLTDSVPLELLEVA*RRVPAL Trigger: AAGAGCAGGAACCCTCCTGCAGGCTACTTCCAAAAG...TTCTAGTGGGACAGAATCAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCATTATCAGTTGGAAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGGGGATACTCTGTGAGTaGTGCCCACTCATTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TALSVGRRPWIPGPKTSLGILCE*CPLISI Trigger: GATGGAAATGAGTGGGCACCACTCACAGAGTATCCC...CAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTTCCAACTGATAATGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGGCCAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCATTGGTCAGGACAAATaGGAAGGTCTCCCTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: EGPKSRLACGSSCISRHSIGQDK*EGLPGI Trigger: TATCCCAGGGAGACCTTCTCATTTGTCCTGACCAAT...GGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTGGCCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | ATCAGTTGGAAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGATTCTGTCAGTGTAGCAGAACACTaGAGTCCACGTGTTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISWKKAMDSRAEDLTDSVSVAEH*SPRVQG Trigger: ACCTTGAACACGTGGACTTCAGTGTTCTGCTACACT...GACAGAATCAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTTCCAACTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGGCCAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCAGTGTAGCAGAACACTaGAGTCCACGTGTTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGPKSRLACGSSCISRHSSVAEH*SPRVQG Trigger: ACCTTGAACACGTGGACTTCAGTGTTCTGCTACACT...GGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTGGCCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGAGCTGTCTCTGCTCAGAATTCTGGGAAACACACCAGATAGTACAAACGACTGTCTTTCCAGGTaGAGGAAAGGCTGCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLELSLLRILGNTPDSTNDCLSR*RKGCLS Trigger: CGAGAGGCAGCCTTTCCTGCACCTGGAAAGACAGTC...GTTTGTACTATCTGGTGTGTTTCCCAGAATTCTGAGCAGAGACAGCTCCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR GCA 90 bp | TGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACCACAGCTTTTACTGGGTAAAGCAGAGCTaGAGCAGCATGGATACACTG | + |
|
Preference number: 4 (lower is better) Translates to: WPVVLAVSLDTPAHHSFYWVKQS*SSMDTL Trigger: CAGTGTATCCATGCTGCTGCAGCTCTGCTTTACCCA...GTAAAAGCTGTGGTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGGCCAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTCCAGCAAAGCTAGATaGAGAATGCTCCTGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGPKSRLACGSSCISRHSSSKAR*RMLLDP Trigger: AGGATCCAGGAGCATTCTCCATCTAGCTTTGCTGGA...GGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTGGCCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGGCCAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCCCATCCACATTaGTCAGGACAAATGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGPKSRLACGSSCISRHSCSHPH*SGQMRR Trigger: CCTTCTCATTTGTCCTGACCAATGTGGATGGGAGCA...GGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTGGCCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | ACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCCACTCTGCCAAAAATACACTTTGGGAAGTTaGGGACCAGGACCGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTAIHLYYYLPLCPLCQKYTLGS*GPGPAG Trigger: GCCTGCCGGTCCTGGTCCTCAACTTCCCAAAGTGTA...TTTTTGGCAGAGTGGACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | CTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCTACACTTTGGGAAGTTaGGGACCAGGACCGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIKHPQQLYTCTTISHYVYTLGS*GPGPAG Trigger: GCCTGCCGGTCCTGGTCCTCAACTTCCCAAAGTGTA...GACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | AGTAATTGTTCAGATGGGGTGGAGGTGGGTTGTCACTTTGTACTCTCCATTTTGGCCGTGTCAGTGAGATaGACTCTGTGCCTGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNCSDGVEVGCHFVLSILAVSVR*TLCLSQ Trigger: CTGACTCAGGCACAGAGTTCATCTCACTGACACGGC...CAAAATGGAGAGTACAAAGTGACAACCCACCTCCACCCCATCTGAACAATTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR TCA 90 bp | ACTGCATTATCAGTTGGAAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGAGTGGCCCACAGTCTTaGCAAAGAACTGTACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TALSVGRRPWIPGPKTSLSGPQS*QRTVQK Trigger: CTTTTGTACAGTTCTTTGTCAAGACTGTGGGCCACT...CAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTTCCAACTGATAATGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTTCAGATGGGGTGGAGGTGGGTTGTCACTTTGTACTCTCCATTTTGGTATCTCCTGGATCCTTTCTaGCTCTGTGACAGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IVQMGWRWVVTLYSPFWYLLDPF*LCDSFP Trigger: GGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAG...ATACCAAAATGGAGAGTACAAAGTGACAACCCACCTCCACCCCATCTGAACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACGAGACCTTGCATGAATaGGTAGATGACAGCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSPDWPVVLAVSLDTPAHETLHE*VDDSHG Trigger: TCCATGGCTGTCATCTACCCATTCATGCAAGGTCTC...GTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | CAACTTCTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTCCACGTGTTCAAGGTaGGAGTCTAGGGGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QLLIKHPQQLYTCTTISHSTCSR*ESRGRV Trigger: GACACGGCCCCTAGACTCCCACCTTGAACACGTGGA...GTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAGAAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | AATGCAGCTTTGAGTACAGTTCTGAGTTTGGATGTGAGCTTTCAAAGTTCTGAGACAAAGGGATGGCACTaGGCAACCGGTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NAALSTVLSLDVSFQSSETKGWH*ATGPPP Trigger: AGGAGGAGGACCGGTTGCTCAGTGCCATCCCTTTGT...CTCAGAACTTTGAAAGCTCACATCCAAACTCAGAACTGTACTCAAAGCTGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | CTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCGCCGTGTCAGTGAGATaGACTCTGTGCCTGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIKHPQQLYTCTTISHYVAVSVR*TLCLSQ Trigger: CTGACTCAGGCACAGAGTTCATCTCACTGACACGGC...GACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCATTATCAGTTGGAAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGAGGGATGTATGTGTGTaGCCAACTAAATGGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TALSVGRRPWIPGPKTSLRDVCV*PTKWVK Trigger: CTTTACCCATTTAGTTGGGCACACACATACATCCCT...CAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTTCCAACTGATAATGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | AATGCAGCTTTGAGTACAGTTCTGAGTTTGGATGTGAGCTTTCAAAGTTCTGAGTCCACGTGTTCAAGGTaGGAGTCTAGGGGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NAALSTVLSLDVSFQSSESTCSR*ESRGRV Trigger: GACACGGCCCCTAGACTCCCACCTTGAACACGTGGA...CTCAGAACTTTGAAAGCTCACATCCAAACTCAGAACTGTACTCAAAGCTGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCATTATCAGTTGGAAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGCTCTTCTCTGCTTCCTaGATGAATAGGGAGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TALSVGRRPWIPGPKTSLLFSAS*MNREKS Trigger: ACTTTTCTCCCTATTCATCCAGGAAGCAGAGAAGAG...CAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTTCCAACTGATAATGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | ACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCCACTCTGCCAAAAATCCTTTCTGGCTCTGTaGCAGCTTCCCCAGGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTAIHLYYYLPLCPLCQKSFLAL*QLPQDC Trigger: ACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGA...TTTTTGGCAGAGTGGACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACCCTCTGCCAAAAAGATaGTTTTTCTTTCCAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QSPDWPVVLAVSLDTPAHPLPKR*FFFPAL Trigger: CAGTGCTGGAAAGAAAAATCATCTTTTTGGCAGAGG...GTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACCACAGCTTTTACAACTCATTTATCCCTTaGCCAAGAGAGTCCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: WPVVLAVSLDTPAHHSFYNSFIP*PRESKM Trigger: CATCTTGGACTCTCTTGGTCAAGGGATAAATGAGTT...GTAAAAGCTGTGGTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGATTCTGTCCCACTAGAATTTTCTTTCCAGCACTaGAGAGGCAAAGATCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KKAMDSRAEDLTDSVPLEFSFQH*RGKDLN Trigger: ATTCAGATCTTTGCCTCTGCAGTGCTGGAAAGAAAA...TTCTAGTGGGACAGAATCAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGGCCAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCGGTACTGAGACCCTCTaGCAAAAAGATGATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGPKSRLACGSSCISRHSGTETL*QKDDFS Trigger: AGAAAAATCATCTTTTTGGCAGAGGGTCTCAGTACC...GGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTGGCCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | AAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCCACTCTGAGACCTTGCATGAATaGGTAGATGACAGCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: KHPQQLYTCTTISHYVHSETLHE*VDDSHG Trigger: TCCATGGCTGTCATCTACCCATTCATGCAAGGTCTC...AGAGTGGACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACTTTTCTTTCCAGCACTaGAGAGGCAAAGATCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSPDWPVVLAVSLDTPAHFSFQH*RGKDLN Trigger: ATTCAGATCTTTGCCTCTGCAGTGCTGGAAAGAAAA...GTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | CAACTTCTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACGGGATACTCTGTGAGTaGTGCCCACTCATTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QLLIKHPQQLYTCTTISHGILCE*CPLISI Trigger: GATGGAAATGAGTGGGCACCACTCACAGAGTATCCC...GTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAGAAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | AGTAATTGTTCAGATGGGGTGGAGGTGGGTTGTCACTTTGTACTCTCCATTTTGTGCTCCCATCCACATTaGTCAGGACAAATGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNCSDGVEVGCHFVLSILCSHPH*SGQMRR Trigger: CCTTCTCATTTGTCCTGACCAATGTGGATGGGAGCA...CAAAATGGAGAGTACAAAGTGACAACCCACCTCCACCCCATCTGAACAATTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR TCA 90 bp | CTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCACAGCCATGGAGATCTaGTGCCTCTTCTCTACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIKHPQQLYTCTTISHYVTAMEI*CLFSTS Trigger: TGAAGTAGAGAAGAGGCATCAGATCTCCATGGCTGT...GACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | CAACTTCTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACGATGAACTCTGTGCCTaGGTCAGGAATGAAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLLIKHPQQLYTCTTISHDELCA*VRNEAL Trigger: AAGAGCTTCATTCCTGACTCAGGCACAGAGTTCATC...GTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAGAAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | AAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCCACTCTAACTCATTTATCCCTTaGCCAAGAGAGTCCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KHPQQLYTCTTISHYVHSNSFIP*PRESKM Trigger: CATCTTGGACTCTCTTGGTCAAGGGATAAATGAGTT...AGAGTGGACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | ACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCCACTCTGCCAAAAAAAGCTAGATGGAGAATaGTCCTGGATCCTTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTAIHLYYYLPLCPLCQKKLDGE*SWILSG Trigger: GCCAGAAAGGATCCAGGAGCATTCTCCATCTAGCTT...TTTTTGGCAGAGTGGACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGT 44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | CAACTTCTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACAGTATCCGATCTTCCTaGTCCCATCCACATTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLLIKHPQQLYTCTTISHSIRSS*SHPHWS Trigger: TGACCAATGTGGATGGGAGCAGGAAGATCGGATACT...GTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAGAAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGAGCTGTCTCTGCTCAGAATTCTGGGAAACACACCAGATAGTACAAACAGGGATGTATGTGTGTaGCCAACTAAATGGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLELSLLRILGNTPDSTNRDVCV*PTKWVK Trigger: CTTTACCCATTTAGTTGGGCACACACATACATCCCT...GTTTGTACTATCTGGTGTGTTTCCCAGAATTCTGAGCAGAGACAGCTCCAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR GCA 90 bp | TGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACCACAGCTTTTACAAAGGGCCTGAAACATaGTCATTGATTTGTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WPVVLAVSLDTPAHHSFYKGPET*SLICSE Trigger: TTCAGAACAAATCAATGAGCATGTTTCAGGCCCTTT...GTAAAAGCTGTGGTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | CTATTTTGTACATGGGTCATTGGGCCAGTGTTCTGTATTGAGGATTTTATAACACTGCAGGAGGGTTCCTaGTCTTCTCTGCTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFCTWVIGPVFCIEDFITLQEGS*SSLLPG Trigger: TCCAGGAAGCAGAGAAGAGCAGGAACCCTCCTGCAG...TGTTATAAAATCCTCAATACAGAACACTGGCCCAATGACCCATGTACAAAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | AAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCCACTCTTATTCAAAGAAGTGCTaGCCTCCAGCAAAGCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KHPQQLYTCTTISHYVHSYSKKC*PPAKLD Trigger: ATCTAGCTTTGCTGGAGGCCAGCACTTCTTTGAATA...AGAGTGGACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR TCA 90 bp | CTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCAGTGGCCCACAGTCTTaGCAAAGAACTGTACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIKHPQQLYTCTTISHYVSGPQS*QRTVQK Trigger: CTTTTGTACAGTTCTTTGTCAAGACTGTGGGCCACT...GACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | AATGCAGCTTTGAGTACAGTTCTGAGTTTGGATGTGAGCTTTCAAAGTTCTGAGAAGCTAGATGGAGAATaGTCCTGGATCCTTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NAALSTVLSLDVSFQSSEKLDGE*SWILSG Trigger: GCCAGAAAGGATCCAGGAGCATTCTCCATCTAGCTT...CTCAGAACTTTGAAAGCTCACATCCAAACTCAGAACTGTACTCAAAGCTGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTTCAGATGGGGTGGAGGTGGGTTGTCACTTTGTACTCTCCATTTTGGTATTATTCAAAGAAGTGCTaGCCTCCAGCAAAGCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IVQMGWRWVVTLYSPFWYYSKKC*PPAKLD Trigger: ATCTAGCTTTGCTGGAGGCCAGCACTTCTTTGAATA...ATACCAAAATGGAGAGTACAAAGTGACAACCCACCTCCACCCCATCTGAACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR CCA 90 bp | CTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCCTTCATCTAGTATCTTaGAGAACAAGCCGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIKHPQQLYTCTTISHYVLHLVS*RTSRSS Trigger: GCTGCTTCGGCTTGTTCTCCAAGATACTAGATGAAG...GACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGTAGAAAGACACAGCTGGCCCTGGTTGTTGAATTCACATACTTAATGAAGCTTCATCTAGTATCTTaGAGAACAAGCCGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCRKTQLALVVEFTYLMKLHLVS*RTSRSS Trigger: GCTGCTTCGGCTTGTTCTCCAAGATACTAGATGAAG...CTTCATTAAGTATGTGAATTCAACAACCAGGGCCAGCTGTGTCTTTCTACAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR CCA 90 bp | ACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCCACTCTGCCAAAAACTCTTCTCTGCTTCCTaGATGAATAGGGAGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTAIHLYYYLPLCPLCQKLFSAS*MNREKS Trigger: ACTTTTCTCCCTATTCATCCAGGAAGCAGAGAAGAG...TTTTTGGCAGAGTGGACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS-3UTR TCA 90 bp | GAAATTGAGACCTCAATTGGCTACCAGTTGTCACACAGTATTGCTACATTTGAGCCTCTGCCAAAAAGATaGTTTTTCTTTCCAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EIETSIGYQLSHSIATFEPLPKR*FFFPAL Trigger: CAGTGCTGGAAAGAAAAATCATCTTTTTGGCAGAGG...CTCAAATGTAGCAATACTGTGTGACAACTGGTAGCCAATTGAGGTCTCAATTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGCCCTGGTTGTTGAATTCACATACTTAATGAAGTATCAGAATCATTCATCTCTGCTTCCTGGATaGATAGGGAGAAAAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLALVVEFTYLMKYQNHSSLLPG*IGRKVV Trigger: CACAACTTTTCTCCCTATTCATCCAGGAAGCAGAGA...TGAATGATTCTGATACTTCATTAAGTATGTGAATTCAACAACCAGGGCCAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| CDS-3UTR TCA 90 bp | AATCTGAAAAACACTGTGTATGTTTCCTTTGGTCAAAGATACTACAAGCATCAGATTGGTCAGGACAAATaGGAAGGTCTCCCTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: NLKNTVYVSFGQRYYKHQIGQDK*EGLPGI Trigger: TATCCCAGGGAGACCTTCTCATTTGTCCTGACCAAT...CTGATGCTTGTAGTATCTTTGACCAAAGGAAACATACACAGTGTTTTTCAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR TCA 90 bp | AATCTGAAAAACACTGTGTATGTTTCCTTTGGTCAAAGATACTACAAGCATCAGGATGAACTCTGTGCCTaGGTCAGGAATGAAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLKNTVYVSFGQRYYKHQDELCA*VRNEAL Trigger: AAGAGCTTCATTCCTGACTCAGGCACAGAGTTCATC...CTGATGCTTGTAGTATCTTTGACCAAAGGAAACATACACAGTGTTTTTCAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR GCA 90 bp | CTATTTTGTACATGGGTCATTGGGCCAGTGTTCTGTATTGAGGATTTTATAACAAGGTATTCAAAGAAGTaGTGGCCTCCAGCAAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LFCTWVIGPVFCIEDFITRYSKK*WPPAKL Trigger: TAGCTTTGCTGGAGGCCAGCACTTCTTTGAATACCT...TGTTATAAAATCCTCAATACAGAACACTGGCCCAATGACCCATGTACAAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | CTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCAAAGGGCCTGAAACATaGTCATTGATTTGTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LIKHPQQLYTCTTISHYVKGPET*SLICSE Trigger: TTCAGAACAAATCAATGAGCATGTTTCAGGCCCTTT...GACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR GCA 90 bp | AATCTGAAAAACACTGTGTATGTTTCCTTTGGTCAAAGATACTACAAGCATCAGAGGTATTCAAAGAAGTaGTGGCCTCCAGCAAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NLKNTVYVSFGQRYYKHQRYSKK*WPPAKL Trigger: TAGCTTTGCTGGAGGCCAGCACTTCTTTGAATACCT...CTGATGCTTGTAGTATCTTTGACCAAAGGAAACATACACAGTGTTTTTCAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| 3UTR CAA 72 bp | TACCTAGTGGAAATTGAGACCTCAATTGGCTACCAGTaGTCACACAGTATTGCTACATTTGAGAATGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: YLVEIETSIGYQ*SHSIATFENGI Trigger: AATTCCATTCTCAAATGTAGCAATACTGTGTGACAACTGGTAGCCAATTGAGGTCTCAATTTCCACTAGGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR GCA 90 bp | CTATTTTGTACATGGGTCATTGGGCCAGTGTTCTGTATTGAGGATTTTATAACAGGTACTGAGACCCTCTaGCAAAAAGATGATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFCTWVIGPVFCIEDFITGTETL*QKDDFS Trigger: AGAAAAATCATCTTTTTGGCAGAGGGTCTCAGTACC...TGTTATAAAATCCTCAATACAGAACACTGGCCCAATGACCCATGTACAAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| 3UTR CAA 72 bp | TGTGCCATCACAACATGTTCAGGTTCAGTCTCTAATTaGGTAGATTATATTGGAGCCTCATTATTTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CAITTCSGSVSN*VDYIGASLFSQ Trigger: CTGTGAAAATAATGAGGCTCCAATATAATCTACCAAATTAGAGACTGAACCTGAACATGTTGTGATGGCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS CCA 90 bp | GTTATCTGCAAGGCAGGGACAAGCTGGATCTCCTCGGGAACCCGCTaGCCGCGTTTCAGTCTCAGGCTGGCTCGGAGGCGGCGGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VICKAGTSWISSGTR*PRFSLRLARRRRPS Trigger: GCTCGGCCGCCGCCTCCGAGCCAGCCTGAGACTGAAACGCGGCCAGCGGGTTCCCGAGGAGATCCAGCTTGTCCCTGCCTTGCAGATAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
||
| CDS GCA 90 bp | GACCAGGACCGGCAGGCAGGAGGCGCCTGCAGTATCCGATCTTCCTaGTCCCATCCACATTGGTCAGGACAAATGAGAAGGTCTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DQDRQAGGACSIRSS*SHPHWSGQMRRSPW Trigger: CCAGGGAGACCTTCTCATTTGTCCTGACCAATGTGGATGGGAGCAGGAAGATCGGATACTGCAGGCGCCTCCTGCCTGCCGGTCCTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS CCA 90 bp | TCCTGGATCCTTTCTGGCTCTGTGACAGCTTCCCCAGGATTGTTCTaGGATTGTCCCCGCTGGCCGCGTTTCAGTCTCAGGCTGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SWILSGSVTASPGLF*DCPRWPRFSLRLAR Trigger: CCGAGCCAGCCTGAGACTGAAACGCGGCCAGCGGGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS GCA 90 bp | TTCTGGCTCTGTGACAGCTTCCCCAGGATTGTTCTGGGATTGTCCTaGTCGAAGTCGTGGCAAGCGATTTCGGAGCAGCCTGAGGGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FWLCDSFPRIVLGLS*SKSWQAISEQPEGS Trigger: CGAACCCTCAGGCTGCTCCGAAATCGCTTGCCACGACTTCGAGCAGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183271.2 |
||
| CDS CCA 90 bp | CTGGCCTCCAGCAAAGCTAGATGGAGAATGCTCCTGGATCCTTTCTaGCTCTGTGACAGCTTCCCCAGGATTGTTCTGGGATTGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LASSKARWRMLLDPF*LCDSFPRIVLGLSP Trigger: CGGGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTCTCCATCTAGCTTTGCTGGAGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS CCA 90 bp | TCCTGGATCCTTTCTGGCTCTGTGACAGCTTCCCCAGGATTGTTCTaGGATTGTCCTGCTCGAAGTCGTGGCAAGCGATTTCGGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SWILSGSVTASPGLF*DCPARSRGKRFRSS Trigger: GCTGCTCCGAAATCGCTTGCCACGACTTCGAGCAGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183271.2 |
||
| CDS GCA 90 bp | AGATTCACTAACAGGACCTCTTCCATGGGACTGTCCATAACCTCCTaGAGGAAGCGCATCTGTACCCCAACCATGAAGGGGGTAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RFTNRTSSMGLSITS*RKRICTPTMKGVGQ Trigger: CTGCCCTACCCCCTTCATGGTTGGGGTACAGATGCGCTTCCTGCAGGAGGTTATGGACAGTCCCATGGAAGAGGTCCTGTTAGTGAATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS CCA 90 bp | CTGGCCTCCAGCAAAGCTAGATGGAGAATGCTCCTGGATCCTTTCTaGCTCTGTGACAGCTTCCCCAGGATTGTTCTGGGATTGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LASSKARWRMLLDPF*LCDSFPRIVLGLSC Trigger: GCAGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTCTCCATCTAGCTTTGCTGGAGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183271.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACGTACACTTTGGGAAGTaGAGGACCAGGACCGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QSPDWPVVLAVSLDTPAHVHFGK*RTRTGR Trigger: CCTGCCGGTCCTGGTCCTCAACTTCCCAAAGTGTAC...GTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS GCA 90 bp | CACAGGGATGTATGTGTGTGCCCAACTAAATGGGTAAAGCAGAGCTaGAGCAGCATGGATACACTGAGACAGGGTACTGAGACCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HRDVCVCPTKWVKQS*SSMDTLRQGTETLC Trigger: GCAGAGGGTCTCAGTACCCTGTCTCAGTGTATCCATGCTGCTGCAGCTCTGCTTTACCCATTTAGTTGGGCACACACATACATCCCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS CCA 90 bp | CTTTCCAGGTGCAGGAAAGGCTGCCTCTCGGAGACCTTGCATGAATaGGTAGATGACAGCCATGGAGATCTGATGCCTCTTCTCTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSRCRKGCLSETLHE*VDDSHGDLMPLLYF Trigger: GAAGTAGAGAAGAGGCATCAGATCTCCATGGCTGTCATCTACCCATTCATGCAAGGTCTCCGAGAGGCAGCCTTTCCTGCACCTGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS CCA 90 bp | AAATGGAGACAGTGTAGCAGAACACTGAAGTCCACGTGTTCAAGGTaGGAGTCTAGGGGCCGTGTCAGTGAGATGAACTCTGTGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KWRQCSRTLKSTCSR*ESRGRVSEMNSVPE Trigger: CTCAGGCACAGAGTTCATCTCACTGACACGGCCCCTAGACTCCCACCTTGAACACGTGGACTTCAGTGTTCTGCTACACTGTCTCCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS CCA 90 bp | AAGGCTCTCAGGGACCACAGGGATGTATGTGTGTGCCCAACTAAATaGGTAAAGCAGAGCTGCAGCAGCATGGATACACTGAGACAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KALRDHRDVCVCPTK*VKQSCSSMDTLRQG Trigger: ACCCTGTCTCAGTGTATCCATGCTGCTGCAGCTCTGCTTTACCCATTTAGTTGGGCACACACATACATCCCTGTGGTCCCTGAGAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGGCCAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCCTCTCGGAGACCTaGCATGAATGGGTAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: EGPKSRLACGSSCISRHSCLSET*HEWVDD Trigger: GTCATCTACCCATTCATGCAAGGTCTCCGAGAGGCA...GGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTGGCCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS-3UTR CAA 90 bp | ATCAGTTGGAAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGATTCTGTCAATCGGCGCTTGGTCTaGGAGGTAACAGCCTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: ISWKKAMDSRAEDLTDSVNRRLV*EVTALQ Trigger: CTGTAAGGCTGTTACCTCCAAGACCAAGCGCCGATT...GACAGAATCAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTTCCAACTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS-3UTR CAA 90 bp | AAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGATTCTGTCCCACTAGAAAATCGGCGCTTGGTCTaGGAGGTAACAGCCTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: KKAMDSRAEDLTDSVPLENRRLV*EVTALQ Trigger: CTGTAAGGCTGTTACCTCCAAGACCAAGCGCCGATT...TTCTAGTGGGACAGAATCAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CAA 90 bp | ATCAGTTGGAAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGATTCTGTCTTCACAAATCGGCGCTaGGTCTTGGAGGTAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISWKKAMDSRAEDLTDSVFTNRR*VLEVTA Trigger: GGCTGTTACCTCCAAGACCAAGCGCCGATTTGTGAA...GACAGAATCAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTTCCAACTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS-3UTR CAA 90 bp | AAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGATTCTGTCCCACTAGAATTCACAAATCGGCGCTaGGTCTTGGAGGTAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KKAMDSRAEDLTDSVPLEFTNRR*VLEVTA Trigger: GGCTGTTACCTCCAAGACCAAGCGCCGATTTGTGAA...TTCTAGTGGGACAGAATCAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS GCA 90 bp | AATGAAGCTCTTAAGGGTGACTGTCTTTCCAGGTGCAGGAAAGGCTaGCTCTCGGAGACCTTGCATGAATGGGTAGATGACAGCCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: NEALKGDCLSRCRKG*LSETLHEWVDDSHG Trigger: TCCATGGCTGTCATCTACCCATTCATGCAAGGTCTCCGAGAGGCAGCCTTTCCTGCACCTGGAAAGACAGTCACCCTTAAGAGCTTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS-3UTR CAA 90 bp | GAAGGGCCAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTTCTTGGAAATGACCTaGTCCACTGGCCTCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: EGPKSRLACGSSCISRHSFLEMT*STGLPF Trigger: AAACGGGAGGCCAGTGGACAAGGTCATTTCCAAGAA...GGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTGGCCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CAA 90 bp | GGGATACTCTGTGAGTGGTGCCCACTCATTTCCATCAGGGAAGCAGAACAAAGGTGGGGAGACCAGTTTTaGTGGCACGGTTATCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GILCEWCPLISIREAEQRWGDQF*WHGYLQ Trigger: TTGCAGATAACCGTGCCACAAAAACTGGTCTCCCCA...CCTTTGTTCTGCTTCCCTGATGGAAATGAGTGGGCACCACTCACAGAGTATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
||
| CDS-3UTR CAA 90 bp | CTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCGTACACTTTGGGAAGTaGAGGACCAGGACCGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LIKHPQQLYTCTTISHYVVHFGK*RTRTGR Trigger: CCTGCCGGTCCTGGTCCTCAACTTCCCAAAGTGTAC...GACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCATTATCAGTTGGAAGAAGGCCATGGATTCCAGGGCCGAAGACCTCACTGCTCAAGTATTTTCTTTaGGAAGTAGCCTGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TALSVGRRPWIPGPKTSLLKYFL*EVACRR Trigger: CCTCCTGCAGGCTACTTCCAAAAGAAAATACTTGAG...CAGTGAGGTCTTCGGCCCTGGAATCCATGGCCTTCTTCCAACTGATAATGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CAA 90 bp | ACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCCACTCTGCCAAAAAGGTTCGGCCTACCCCTaGTCCTTCCATCATTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TTAIHLYYYLPLCPLCQKGSAYP*SFHHSE Trigger: CTCAGAATGATGGAAGGACAAGGGGTAGGCCGAACC...TTTTTGGCAGAGTGGACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183271.2 |
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| CDS-3UTR CAA 90 bp | GAAGGGCCAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCCCTGAAACATGCTCATaGATTTGTTCTGAAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EGPKSRLACGSSCISRHSPETCS*ICSEVF Trigger: AAAGACTTCAGAACAAATCAATGAGCATGTTTCAGG...GGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTGGCCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTCCAGATTGGCCTGTGGTTCTAGCTGTATCTCTAGACACTCCTGCTCACTGTCATCCTGAAGTTTaGGTGGTAGAATATCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSPDWPVVLAVSLDTPAHCHPEV*VVEYLS Trigger: AGAAAGATATTCTACCACCAAAACTTCAGGATGACA...GTGAGCAGGAGTGTCTAGAGATACAGCTAGAACCACAGGCCAATCTGGACTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS-3UTR CAA 90 bp | GAAATTGAGACCTCAATTGGCTACCAGTTGTCACACAGTATTGCTACATTTGAGTTCTTGGAAATGACCTaGTCCACTGGCCTCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: EIETSIGYQLSHSIATFEFLEMT*STGLPF Trigger: AAACGGGAGGCCAGTGGACAAGGTCATTTCCAAGAA...CTCAAATGTAGCAATACTGTGTGACAACTGGTAGCCAATTGAGGTCTCAATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
||
| CDS-3UTR CAA 90 bp | ATTGTTCAGATGGGGTGGAGGTGGGTTGTCACTTTGTACTCTCCATTTTGGTATCTCAAGTATTTTCTTTaGGAAGTAGCCTGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IVQMGWRWVVTLYSPFWYLKYFL*EVACRR Trigger: CCTCCTGCAGGCTACTTCCAAAAGAAAATACTTGAG...ATACCAAAATGGAGAGTACAAAGTGACAACCCACCTCCACCCCATCTGAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| CDS-3UTR CAA 90 bp | CTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCACTTCATCTAGTATCTaGGAGAACAAGCCGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LIKHPQQLYTCTTISHYVTSSSI*ENKPKQ Trigger: CTGCTTCGGCTTGTTCTCCAAGATACTAGATGAAGT...GACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS-3UTR CAA 90 bp | CTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCACAGAAGGATCGTTCTaGGAAATGACCTTGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LIKHPQQLYTCTTISHYVTEGSF*EMTLST Trigger: AGTGGACAAGGTCATTTCCAAGAACGATCCTTCTGT...GACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS-3UTR CAA 90 bp | CAACTTCTAATTAAGCACCCACAACAGCTATACACCTGTACTACTATCTCCCACACAGAAGGATCGTTCTaGGAAATGACCTTGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QLLIKHPQQLYTCTTISHTEGSF*EMTLST Trigger: AGTGGACAAGGTCATTTCCAAGAACGATCCTTCTGT...GTGGGAGATAGTAGTACAGGTGTATAGCTGTTGTGGGTGCTTAATTAGAAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS TCA 90 bp | GCCAAAAAGATGATTTTTCTTTCCAGCACTGCAGAGGCAAAGATCTaGATAATCTGCTCCAAATGGAGACAGTGTAGCAGAACACTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AKKMIFLSSTAEAKI*IICSKWRQCSRTLK Trigger: CTTCAGTGTTCTGCTACACTGTCTCCATTTGGAGCAGATTATTCAGATCTTTGCCTCTGCAGTGCTGGAAAGAAAAATCATCTTTTTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS-3UTR CAA 90 bp | CAGCTGGCCCTGGTTGTTGAATTCACATACTTAATGAAGTATCAGAATCATTCAACTTCATCTAGTATCTaGGAGAACAAGCCGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLALVVEFTYLMKYQNHSTSSSI*ENKPKQ Trigger: CTGCTTCGGCTTGTTCTCCAAGATACTAGATGAAGT...TGAATGATTCTGATACTTCATTAAGTATGTGAATTCAACAACCAGGGCCAGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| CDS-3UTR CAA 90 bp | ACAACAGCTATACACCTGTACTACTATCTCCCACTATGTCCACTCTGCCAAAAACCTGAAACATGCTCATaGATTTGTTCTGAAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTAIHLYYYLPLCPLCQKPETCS*ICSEVF Trigger: AAAGACTTCAGAACAAATCAATGAGCATGTTTCAGG...TTTTTGGCAGAGTGGACATAGTGGGAGATAGTAGTACAGGTGTATAGCTGTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS-3UTR CAA 90 bp | CTTTGTAGAAAGACACAGCTGGCCCTGGTTGTTGAATTCACATACTTAATGAAGTGTCATCCTGAAGTTTaGGTGGTAGAATATCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCRKTQLALVVEFTYLMKCHPEV*VVEYLS Trigger: AGAAAGATATTCTACCACCAAAACTTCAGGATGACA...CTTCATTAAGTATGTGAATTCAACAACCAGGGCCAGCTGTGTCTTTCTACAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| CDS CCA 72 bp | AAGGCAGGGACAAGCTGGATCTCCTCGGGAACCCGCTaGCCGCGTTTCAGTCTCAGGCTGGCTCGGAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: KAGTSWISSGTR*PRFSLRLARRR Trigger: CCGCCTCCGAGCCAGCCTGAGACTGAAACGCGGCCAGCGGGTTCCCGAGGAGATCCAGCTTGTCCCTGCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| CDS CCA 72 bp | ACAGCTTCCCCAGGATTGTTCTGGGATTGTCCCCGCTaGCCGCGTTTCAGTCTCAGGCTGGCTCGGAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: TASPGLFWDCPR*PRFSLRLARRR Trigger: CCGCCTCCGAGCCAGCCTGAGACTGAAACGCGGCCAGCGGGGACAATCCCAGAACAATCCTGGGGAAGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| CDS GCA 72 bp | GAAGTTGAGGACCAGGACCGGCAGGCAGGAGGCGCCTaGAGTATCCGATCTTCCTGCTCCCATCCACATTGG | + |
|
Preference number: 6 (lower is better) Translates to: EVEDQDRQAGGA*SIRSSCSHPHW Trigger: CCAATGTGGATGGGAGCAGGAAGATCGGATACTGCAGGCGCCTCCTGCCTGCCGGTCCTGGTCCTCAACTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS CAA 90 bp | GAATGCTCCTGGATCCTTTCTGGCTCTGTGACAGCTTCCCCAGGATaGTTCTGGGATTGTCCCCGCTGGCCGCGTTTCAGTCTCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ECSWILSGSVTASPG*FWDCPRWPRFSLRL Trigger: CAGCCTGAGACTGAAACGCGGCCAGCGGGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| CDS TCA 72 bp | CTGCTCGAAGTCGTGGCAAGCGATTTCGGAGCAGCCTaGGGGTTCGGCCTACCCCTTGTCCTTCCATCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LLEVVASDFGAA*GFGLPLVLPSF Trigger: GAATGATGGAAGGACAAGGGGTAGGCCGAACCCTCAGGCTGCTCCGAAATCGCTTGCCACGACTTCGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183271.2 |
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| CDS GCA 72 bp | GGGCTTGGGGAGACCAGTTTTTGTGGCACGGTTATCTaGAAGGCAGGGACAAGCTGGATCTCCTCGGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: GLGETSFCGTVI*KAGTSWISSGT Trigger: GGTTCCCGAGGAGATCCAGCTTGTCCCTGCCTTGCAGATAACCGTGCCACAAAAACTGGTCTCCCCAAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| CDS CCA 72 bp | CTTTCTGGCTCTGTGACAGCTTCCCCAGGATTGTTCTaGGATTGTCCCCGCTGGCCGCGTTTCAGTCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSGSVTASPGLF*DCPRWPRFSLR Trigger: CCTGAGACTGAAACGCGGCCAGCGGGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| CDS CCA 72 bp | TTTTGTGGCACGGTTATCTGCAAGGCAGGGACAAGCTaGATCTCCTCGGGAACCCGCTGGCCGCGTTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: FCGTVICKAGTS*ISSGTRWPRFS Trigger: ACTGAAACGCGGCCAGCGGGTTCCCGAGGAGATCCAGCTTGTCCCTGCCTTGCAGATAACCGTGCCACAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149225.2 |
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| CDS CAA 72 bp | TGGATCCTTTCTGGCTCTGTGACAGCTTCCCCAGGATaGTTCTGGGATTGTCCCCGCTGGCCGCGTTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WILSGSVTASPG*FWDCPRWPRFS Trigger: ACTGAAACGCGGCCAGCGGGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029508.11 |
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| CDS CAA 90 bp | GATCCTTTCTGGCTCTGTGACAGCTTCCCCAGGATTGTTCTGGGATaGTCCTGCTCGAAGTCGTGGCAAGCGATTTCGGAGCAGCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: DPFWLCDSFPRIVLG*SCSKSWQAISEQPE Trigger: CTCAGGCTGCTCCGAAATCGCTTGCCACGACTTCGAGCAGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183271.2 |
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| CDS GCA 72 bp | AACAGGACCTCTTCCATGGGACTGTCCATAACCTCCTaGAGGAAGCGCATCTGTACCCCAACCATGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: NRTSSMGLSITS*RKRICTPTMKG Trigger: CCCCTTCATGGTTGGGGTACAGATGCGCTTCCTGCAGGAGGTTATGGACAGTCCCATGGAAGAGGTCCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS CAA 72 bp | TGGCTCTGTGACAGCTTCCCCAGGATTGTTCTGGGATaGTCCTGCTCGAAGTCGTGGCAAGCGATTTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: WLCDSFPRIVLG*SCSKSWQAISE Trigger: CTCCGAAATCGCTTGCCACGACTTCGAGCAGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183271.2 |
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| CDS CAA 90 bp | GAATGCTCCTGGATCCTTTCTGGCTCTGTGACAGCTTCCCCAGGATaGTTCTGGGATTGTCCTGCTCGAAGTCGTGGCAAGCGATTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: ECSWILSGSVTASPG*FWDCPARSRGKRFR Trigger: CCGAAATCGCTTGCCACGACTTCGAGCAGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCAGGAGCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183271.2 |
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| CDS CAA 72 bp | CTTTCCAGGTGCAGGAAAGGCTGCCTCTCGGAGACCTaGCATGAATGGGTAGATGACAGCCATGGAGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSRCRKGCLSET*HEWVDDSHGDL Trigger: CAGATCTCCATGGCTGTCATCTACCCATTCATGCAAGGTCTCCGAGAGGCAGCCTTTCCTGCACCTGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS CAA 72 bp | TGGATCCTTTCTGGCTCTGTGACAGCTTCCCCAGGATaGTTCTGGGATTGTCCTGCTCGAAGTCGTGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: WILSGSVTASPG*FWDCPARSRGK Trigger: CTTGCCACGACTTCGAGCAGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAGGATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183271.2 |
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| CDS CAA 90 bp | GGTGACTGTCTTTCCAGGTGCAGGAAAGGCTGCCTCTCGGAGACCTaGCATGAATGGGTAGATGACAGCCATGGAGATCTGATGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GDCLSRCRKGCLSET*HEWVDDSHGDLMPL Trigger: AAGAGGCATCAGATCTCCATGGCTGTCATCTACCCATTCATGCAAGGTCTCCGAGAGGCAGCCTTTCCTGCACCTGGAAAGACAGTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS GCA 72 bp | CTTAAGGGTGACTGTCTTTCCAGGTGCAGGAAAGGCTaGCTCTCGGAGACCTTGCATGAATGGGTAGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: LKGDCLSRCRKG*LSETLHEWVDD Trigger: GTCATCTACCCATTCATGCAAGGTCTCCGAGAGGCAGCCTTTCCTGCACCTGGAAAGACAGTCACCCTTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS CCA 72 bp | TGCAGGAAAGGCTGCCTCTCGGAGACCTTGCATGAATaGGTAGATGACAGCCATGGAGATCTGATGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CRKGCLSETLHE*VDDSHGDLMPL Trigger: AAGAGGCATCAGATCTCCATGGCTGTCATCTACCCATTCATGCAAGGTCTCCGAGAGGCAGCCTTTCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS CCA 72 bp | CAGTGTAGCAGAACACTGAAGTCCACGTGTTCAAGGTaGGAGTCTAGGGGCCGTGTCAGTGAGATGAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: QCSRTLKSTCSR*ESRGRVSEMNS Trigger: AGAGTTCATCTCACTGACACGGCCCCTAGACTCCCACCTTGAACACGTGGACTTCAGTGTTCTGCTACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS CCA 72 bp | CTTTCTGGCTCTGTGACAGCTTCCCCAGGATTGTTCTaGGATTGTCCTGCTCGAAGTCGTGGCAAGCGATTT | + |
|
Preference number: 6 (lower is better) Translates to: LSGSVTASPGLF*DCPARSRGKRF Trigger: AAATCGCTTGCCACGACTTCGAGCAGGACAATCCCAGAACAATCCTGGGGAAGCTGTCACAGAGCCAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183271.2 |
||
| CDS CAA 90 bp | TCGGCGCTTGGTCTTGGAGGTAACAGCCTTACAGAAGGATCGTTCTaGGAAATGACCTTGTCCACTGGCCTCCCGTTTTATATAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SALGLGGNSLTEGSF*EMTLSTGLPFYIGG Trigger: GCCTCCTATATAAAACGGGAGGCCAGTGGACAAGGTCATTTCCAAGAACGATCCTTCTGTAAGGCTGTTACCTCCAAGACCAAGCGCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS GCA 72 bp | AGGAATGAAGCTCTTAAGGGTGACTGTCTTTCCAGGTaGAGGAAAGGCTGCCTCTCGGAGACCTTGCATGAA | + |
|
Preference number: 6 (lower is better) Translates to: RNEALKGDCLSR*RKGCLSETLHE Trigger: TTCATGCAAGGTCTCCGAGAGGCAGCCTTTCCTGCACCTGGAAAGACAGTCACCCTTAAGAGCTTCATTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
||
| CDS CAA 90 bp | CTTGGAGGTAACAGCCTTACAGAAGGATCGTTCTTGGAAATGACCTaGTCCACTGGCCTCCCGTTTTATATAGGAGGCATAGTGGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LGGNSLTEGSFLEMT*STGLPFYIGGIVAH Trigger: GTGGGCCACTATGCCTCCTATATAAAACGGGAGGCCAGTGGACAAGGTCATTTCCAAGAACGATCCTTCTGTAAGGCTGTTACCTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS GCA 72 bp | GTATGTGTGTGCCCAACTAAATGGGTAAAGCAGAGCTaGAGCAGCATGGATACACTGAGACAGGGTACTGAG | + |
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Preference number: 6 (lower is better) Translates to: VCVCPTKWVKQS*SSMDTLRQGTE Trigger: CTCAGTACCCTGTCTCAGTGTATCCATGCTGCTGCAGCTCTGCTTTACCCATTTAGTTGGGCACACACATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS CAA 72 bp | AACAGCCTTACAGAAGGATCGTTCTTGGAAATGACCTaGTCCACTGGCCTCCCGTTTTATATAGGAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: NSLTEGSFLEMT*STGLPFYIGGI Trigger: TATGCCTCCTATATAAAACGGGAGGCCAGTGGACAAGGTCATTTCCAAGAACGATCCTTCTGTAAGGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS TCA 72 bp | ATGATTTTTCTTTCCAGCACTGCAGAGGCAAAGATCTaGATAATCTGCTCCAAATGGAGACAGTGTAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: MIFLSSTAEAKI*IICSKWRQCSR Trigger: TCTGCTACACTGTCTCCATTTGGAGCAGATTATTCAGATCTTTGCCTCTGCAGTGCTGGAAAGAAAAATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS GCA 72 bp | ACCCTCTGCCAAAAAGATGATTTTTCTTTCCAGCACTaGAGAGGCAAAGATCTGAATAATCTGCTCCAAATG | + |
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Preference number: 6 (lower is better) Translates to: TLCQKDDFSFQH*RGKDLNNLLQM Trigger: CATTTGGAGCAGATTATTCAGATCTTTGCCTCTGCAGTGCTGGAAAGAAAAATCATCTTTTTGGCAGAGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS TCA 72 bp | CAAAGAACTGTACAAAAGGGCCTGAAACATGCTCATTaGTTTGTTCTGAAGTCTTTAACTCATTTATCCCTT | + |
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Preference number: 6 (lower is better) Translates to: QRTVQKGLKHAH*FVLKSLTHLSL Trigger: AAGGGATAAATGAGTTAAAGACTTCAGAACAAATCAATGAGCATGTTTCAGGCCCTTTTGTACAGTTCTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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| CDS CAA 72 bp | ACAAAGAACTGTACAAAAGGGCCTGAAACATGCTCATaGATTTGTTCTGAAGTCTTTAACTCATTTATCCCT | + |
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Preference number: 6 (lower is better) Translates to: TKNCTKGPETCS*ICSEVFNSFIP Trigger: AGGGATAAATGAGTTAAAGACTTCAGAACAAATCAATGAGCATGTTTCAGGCCCTTTTGTACAGTTCTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029508.11 ENSMUST00000183271.2 |
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