Pregenerated sensors for DENND2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007379Ensembl transcript IDs: ENSMUST00000172288.3, ENSMUST00000173206.8
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGAAGAAGGAAAGGAGAGAGCTGTCTGGGAGGAGCTCCCCTGGGTaGGCTGCACTAACATTTGAAAGGACAGACTCAGTTCTCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: RKKERRELSGRSSPG*AALTFERTDSVLFP Trigger: AGGGAAGAGAACTGAGTCTGTCCTTTCAAATGTTAGTGCAGCTCACCCAGGGGAGCTCCTCCCAGACAGCTCTCTCCTTTCCTTCTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR GCA 90 bp | GAAGGAGAAGAGAGCGCACTGGTTCTAGACTGCTCCCAGTTGGTCTaGAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGT | + |
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Preference number: 1 (lower is better) Translates to: EGEESALVLDCSQLV*SNRRVFQQSFSFYS Trigger: ACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACTGGGAGCAGTCTAGAACCAGTGCGCTCTCTTCTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR TCA 90 bp | TTGCACAGCACCAGTCTTAAATGGATTCATTCAGACACCCTAGTATaGGTGACAATGACAATACTATACAAGTCAGTGAGTTGTATCCCA | + |
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Preference number: 1 (lower is better) Translates to: LHSTSLKWIHSDTLV*VTMTILYKSVSCIP Trigger: TGGGATACAACTCACTGACTTGTATAGTATTGTCATTGTCACTCATACTAGGGTGTCTGAATGAATCCATTTAAGACTGGTGCTGTGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR TCA 90 bp | TTTCCATGCCAGGTAAAGCAGTGGGCAAAGGTTACAGAAAACAACTaGCATTTACCACAACATTTCTCACTTATCAATGAAAACTGTACC | + |
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Preference number: 1 (lower is better) Translates to: FPCQVKQWAKVTENN*HLPQHFSLINENCT Trigger: GGTACAGTTTTCATTGATAAGTGAGAAATGTTGTGGTAAATGTCAGTTGTTTTCTGTAACCTTTGCCCACTGCTTTACCTGGCATGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGTCTCCCTGCAGAGGGACAGTCATGATTGACCACAGTAAACCCTCCTTCAAGGAGAGAGCTGTCTaGGAGGAGCTCCCCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: KQSPCRGTVMIDHSKPSFKERAV*EELPWV Trigger: CACCCAGGGGAGCTCCTCCCAGACAGCTCTCTCCTT...GAAGGAGGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR TCA 90 bp | AACCAGTGTGGCAGAGCACACAAAAGGCCCTGGGTCCTATCCCCAGCAGCAGAATGTCTCCCTAGTACCTaGAACTCTCATTATTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: NQCGRAHKRPWVLSPAAECLPST*NSHYSP Trigger: AGGAGAATAATGAGAGTTTCAGGTACTAGGGAGACA...TTCTGCTGCTGGGGATAGGACCCAGGGCCTTTTGTGTGCTCTGCCACACTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGTCTCCCTGCAGAGGGACAGTCATGATTGACCACAGTAAACCCTCCTTCCTCAGTTCTCTTCCCTaGACCCATGTGTGGGAACTA | + |
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Preference number: 2 (lower is better) Translates to: KQSPCRGTVMIDHSKPSFLSSLP*THVWEL Trigger: TAGTTCCCACACATGGGTCCAGGGAAGAGAACTGAG...GAAGGAGGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGAGGACCTCTGTGAGATCTTTGAGATTTGTGACATCAGGATTTGAGGCCTGCTCCCAGTTGGTCTaGAGCAACAGGAGAGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: GRRTSVRSLRFVTSGFEACSQLV*SNRRVF Trigger: GAAAACTCTCCTGTTGCTGCAGACCAACTGGGAGCA...GGCCTCAAATCCTGATGTCACAAATCTCAAAGATCTCACAGAGGTCCTCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR TCA 90 bp | TCATTCAGACACCCTAGTATGAGTGACAATGACAATACTATACAAGTCAGTGAGGGCGGTGCACGCCTTTaGTCTCAGCACTTGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: SFRHPSMSDNDNTIQVSEGGARL*SQHLGG Trigger: GCCTCCCAAGTGCTGAGATCAAAGGCGTGCACCGCC...CTCACTGACTTGTATAGTATTGTCATTGTCACTCATACTAGGGTGTCTGAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR CAA 90 bp | GGACAGACTCAGTTCTCTTCCCTGGACCCATGTGTGGGAACTATATaGCACAGCACCAGTCTTAAATGGATTCATTCAGACACCCTAGTA | + |
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Preference number: 2 (lower is better) Translates to: GQTQFSSLDPCVGTI*HSTSLKWIHSDTLV Trigger: TACTAGGGTGTCTGAATGAATCCATTTAAGACTGGTGCTGTGCAATATAGTTCCCACACATGGGTCCAGGGAAGAGAACTGAGTCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCTTTGTATGTGTTCATAAGGGCGGTGCACGCCTTTaGTCTCAGCACTTGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: IKSSFTAVGLTSFVCVHKGGARL*SQHLGG Trigger: GCCTCCCAAGTGCTGAGATCAAAGGCGTGCACCGCC...CTTATGAACACATACAAAGCTGGTTAGTCCTACAGCTGTAAATGAACTCTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGTCTCCCTGCAGAGGGACAGTCATGATTGACCACAGTAAACCCTCCTTCGTGTGGGAACTATATTaGACAGCACCAGTCTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: KQSPCRGTVMIDHSKPSFVWELY*TAPVLN Trigger: ATTTAAGACTGGTGCTGTGCAATATAGTTCCCACAC...GAAGGAGGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR TCA 90 bp | TCATCAGAGCCAAAAAGGAAGCTCTGGTGTGCTCCACAGAGAACTTTAAACATCTGTCTCCCTAGTACCTaGAACTCTCATTATTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSEPKRKLWCAPQRTLNICLPST*NSHYSP Trigger: AGGAGAATAATGAGAGTTTCAGGTACTAGGGAGACA...GATGTTTAAAGTTCTCTGTGGAGCACACCAGAGCTTCCTTTTTGGCTCTGATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGGCAAAGGTTACAGAAAAGGAAGCTCTGGTGTaGTCCACAGAGAACTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: SLNEYFPCQVKQWAKVTEKEALV*STENFK Trigger: TTTAAAGTTCTCTGTGGAGCACACCAGAGCTTCCTT...TTCTGTAACCTTTGCCCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR CAA 90 bp | AACCAGTGTGGCAGAGCACACAAAAGGCCCTGGGTCCTATCCCCAGCAGCAGAAACAAAGCAGAGGCTCTaGCACCCATCAGTAACCAAA | + |
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Preference number: 3 (lower is better) Translates to: NQCGRAHKRPWVLSPAAETKQRL*HPSVTK Trigger: TTTGGTTACTGATGGGTGCAAGAGCCTCTGCTTTGT...TTCTGCTGCTGGGGATAGGACCCAGGGCCTTTTGTGTGCTCTGCCACACTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR TCA 72 bp | GAAAGGAGAGAGCTGTCTGGGAGGAGCTCCCCTGGGTaGGCTGCACTAACATTTGAAAGGACAGACTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: ERRELSGRSSPG*AALTFERTDSV Trigger: AACTGAGTCTGTCCTTTCAAATGTTAGTGCAGCTCACCCAGGGGAGCTCCTCCCAGACAGCTCTCTCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR GCA 72 bp | GAGAGCGCACTGGTTCTAGACTGCTCCCAGTTGGTCTaGAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: ESALVLDCSQLV*SNRRVFQQSFS Trigger: GGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACTGGGAGCAGTCTAGAACCAGTGCGCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR TCA 72 bp | TCTCCCAAAAGCAGTCTCCCTGCAGAGGGACAGTCATaGTTGACCACAGTAAACCCTCCTTCCCCATCTTAT | + |
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Preference number: 3 (lower is better) Translates to: SPKSSLPAEGQS*LTTVNPPSPSY Trigger: ATAAGATGGGGAAGGAGGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGCTTTTGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR GCA 72 bp | AAATCAGAAGGAGAAGAGAGCGCACTGGTTCTAGACTaGTCCCAGTTGGTCTGCAGCAACAGGAGAGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: KSEGEESALVLD*SQLVCSNRRVF Trigger: GAAAACTCTCCTGTTGCTGCAGACCAACTGGGAGCAGTCTAGAACCAGTGCGCTCTCTTCTCCTTCTGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR CCA 72 bp | CAGATGTTACAGGACTCTCCCGAGCATCCAGATCCTTaGGAAAACACTGTCGTTGGCACTTCCAGCTATGTT | + |
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Preference number: 3 (lower is better) Translates to: QMLQDSPEHPDP*ENTVVGTSSYV Trigger: AACATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCGGGAGAGTCCTGTAACATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR CAA 90 bp | GGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCACAGCGAGCATCCAGATCCTaGGGAAAACACTGTCGTTGG | + |
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Preference number: 3 (lower is better) Translates to: GLQQQESFPTVFLLLQSQRASRS*GKHCRW Trigger: CCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCG...CTGTGACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR CAA 90 bp | TCATCAGAGCCAAAAAGGAAGCTCTGGTGTGCTCCACAGAGAACTTTAAACATCCGAGCATCCAGATCCTaGGGAAAACACTGTCGTTGG | + |
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Preference number: 3 (lower is better) Translates to: SSEPKRKLWCAPQRTLNIRASRS*GKHCRW Trigger: CCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCG...GATGTTTAAAGTTCTCTGTGGAGCACACCAGAGCTTCCTTTTTGGCTCTGATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR TCA 72 bp | CTCTGTGAGATCTTTGAGATTTGTGACATCAGGATTTaGGGCCAGCCCGATCTACAGAACGAGTTCCATCAC | + |
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Preference number: 3 (lower is better) Translates to: LCEIFEICDIRI*GQPDLQNEFHH Trigger: GTGATGGAACTCGTTCTGTAGATCGGGCTGGCCTCAAATCCTGATGTCACAAATCTCAAAGATCTCACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR GCA 72 bp | TTAAGAAGGTTAAGACTCTCCCAAAAGCAGTCTCCCTaGAGAGGGACAGTCATGATTGACCACAGTAAACCC | + |
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Preference number: 3 (lower is better) Translates to: LRRLRLSQKQSP*RGTVMIDHSKP Trigger: GGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGCTTTTGGGAGAGTCTTAACCTTCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR CAA 90 bp | ATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCTTTGTATGTGTTCATAAGTGGCGGTGCACGCCTTaGATCTCAGCACTTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: IKSSFTAVGLTSFVCVHKWRCTP*ISALGR Trigger: CCTCCCAAGTGCTGAGATCAAAGGCGTGCACCGCCA...CTTATGAACACATACAAAGCTGGTTAGTCCTACAGCTGTAAATGAACTCTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCAGTCTCCCTGCAGAGGGACAGTCATGATTGACCACAGTAAACCCTCCTTCAAGGACATTTTAATGTaGGCTCCATTCCATAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: KQSPCRGTVMIDHSKPSFKDILM*APFHKA Trigger: TGCTTTATGGAATGGAGCCAACATTAAAATGTCCTT...GAAGGAGGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR TCA 72 bp | GACCATGGTGTCCTCCATGTCTGTCTCCCTAGTACCTaGAACTCTCATTATTCTCCTTATTTCTCTGTCAAT | + |
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Preference number: 3 (lower is better) Translates to: DHGVLHVCLPST*NSHYSPYFSVN Trigger: ATTGACAGAGAAATAAGGAGAATAATGAGAGTTTCAGGTACTAGGGAGACAGACATGGAGGACACCATGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR TCA 72 bp | ATCCCAGTACAACAAACAACACTTTCCAAGTCTGAATaGGTATTTTCCATGCCAGGTAAAGCAGTGGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: IPVQQTTLSKSE*VFSMPGKAVGK Trigger: TTTGCCCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTTGTTGTACTGGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR CAA 90 bp | TCATCAGAGCCAAAAAGGAAGCTCTGGTGTGCTCCACAGAGAACTTTAAACATCAAGGACATTTTAATGTaGGCTCCATTCCATAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: SSEPKRKLWCAPQRTLNIKDILM*APFHKA Trigger: TGCTTTATGGAATGGAGCCAACATTAAAATGTCCTT...GATGTTTAAAGTTCTCTGTGGAGCACACCAGAGCTTCCTTTTTGGCTCTGATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR CAA 90 bp | TCATTCAGACACCCTAGTATGAGTGACAATGACAATACTATACAAGTCAGTGAGACCTCTGTGAGATCTTaGAGATTTGTGACATCAGGA | + |
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Preference number: 3 (lower is better) Translates to: SFRHPSMSDNDNTIQVSETSVRS*RFVTSG Trigger: TCCTGATGTCACAAATCTCAAAGATCTCACAGAGGT...CTCACTGACTTGTATAGTATTGTCATTGTCACTCATACTAGGGTGTCTGAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR CAA 90 bp | AAACAACACTTTCCAAGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGATTTTCAGCATCTGGTaGATGAAGAGGCTTAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: KQHFPSLNEYFPCQVKQWIFSIW*MKRLRK Trigger: TTTCCTAAGCCTCTTCATCAACCAGATGCTGAAAAT...CCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR GCA 72 bp | AAACAACACTTTCCAAGTCTGAATGAGTATTTTCCATaGCAGGTAAAGCAGTGGGCAAAGGTTACAGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: KQHFPSLNEYFP*QVKQWAKVTEN Trigger: GTTTTCTGTAACCTTTGCCCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR-3UTR CAA 90 bp | ACAATACTATACAAGTCAGTGAGTTGTATCCCAGTACAACAAACAACACTTTCCATTTTCAGCATCTGGTaGATGAAGAGGCTTAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: TILYKSVSCIPVQQTTLSIFSIW*MKRLRK Trigger: TTTCCTAAGCCTCTTCATCAACCAGATGCTGAAAAT...GGAAAGTGTTGTTTGTTGTACTGGGATACAACTCACTGACTTGTATAGTATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR TCA 72 bp | CAGGTAAAGCAGTGGGCAAAGGTTACAGAAAACAACTaGCATTTACCACAACATTTCTCACTTATCAATGAA | + |
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Preference number: 3 (lower is better) Translates to: QVKQWAKVTENN*HLPQHFSLINE Trigger: TTCATTGATAAGTGAGAAATGTTGTGGTAAATGTCAGTTGTTTTCTGTAACCTTTGCCCACTGCTTTACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR TCA 72 bp | ACCAGTCTTAAATGGATTCATTCAGACACCCTAGTATaGGTGACAATGACAATACTATACAAGTCAGTGAGT | + |
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Preference number: 3 (lower is better) Translates to: TSLKWIHSDTLV*VTMTILYKSVS Trigger: ACTCACTGACTTGTATAGTATTGTCATTGTCACTCATACTAGGGTGTCTGAATGAATCCATTTAAGACTGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| 3UTR CCA 72 bp | CTAACCAGCTTTGTATGTGTTCATAAGTCAAGTGTTTaGCTTAGTTCTTTCTTGTATATAACTGGCCAAATT | + |
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Preference number: 3 (lower is better) Translates to: LTSFVCVHKSSV*LSSFLYITGQI Trigger: AATTTGGCCAGTTATATACAAGAAAGAACTAAGCCAAACACTTGACTTATGAACACATACAAAGCTGGTTAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR TCA 90 bp | CTCCCGAGCATCCAGATCCTTGGGAAAACACTGTCGTTGGCACTTCCAGCTATGCACATGTTCCAGGCGTaGATCGAGTGGTCGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LPSIQILGKTLSLALPAMHMFQA*IEWSAE Trigger: CTCTGCCGACCACTCGATTCACGCCTGGAACATGTG...CATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CCA 90 bp | ATGAGAAGCAAGCTATCCCAGCAGGACACGTGTTCTGAGGAGGCCATGCCTGGTACACTTCGGGAAGTGTaGGACTTCCGGAATGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: MRSKLSQQDTCSEEAMPGTLREV*DFRNGS Trigger: GGAGCCATTCCGGAAGTCCCACACTTCCCGAAGTGT...ACCAGGCATGGCCTCCTCAGAACACGTGTCCTGCTGGGATAGCTTGCTTCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR TCA 90 bp | ATGAGAAGCAAGCTATCCCAGCAGGACACGTGTTCTGAGGAGGCCATGCCTGGTACTGGTTTCACCTTTTaGGGAGGGGGCTTCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: MRSKLSQQDTCSEEAMPGTGFTF*GGGFLS Trigger: GGAAAGGAAGCCCCCTCCTCAAAAGGTGAAACCAGT...ACCAGGCATGGCCTCCTCAGAACACGTGTCCTGCTGGGATAGCTTGCTTCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR GCA 90 bp | CTCCCGAGCATCCAGATCCTTGGGAAAACACTGTCGTTGGCACTTCCAGCTATGGGAGCCGCTTTCCCCTaGCTTCTGGCAAAAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LPSIQILGKTLSLALPAMGAAFP*LLAKAS Trigger: AGAAGCTTTTGCCAGAAGGCAGGGGAAAGCGGCTCC...CATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CCA 90 bp | GGCAGGAGGACCTCTGTGAGATCTTTGAGATTTGTGACATCAGGATTTGAGGCCCCAGCTTCCGAGGGGTaGGAGCCTCTACACTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GRRTSVRSLRFVTSGFEAPASEG*EPLHSP Trigger: TGGAGAGTGTAGAGGCTCCCACCCCTCGGAAGCTGG...GGCCTCAAATCCTGATGTCACAAATCTCAAAGATCTCACAGAGGTCCTCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR TCA 90 bp | CTCCCGAGCATCCAGATCCTTGGGAAAACACTGTCGTTGGCACTTCCAGCTATGGCTCCCCACGCTCTGTaGCAGTCATGTTCAGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LPSIQILGKTLSLALPAMAPHAL*QSCSEN Trigger: ATTCTCTGAACATGACTGTCACAGAGCGTGGGGAGC...CATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR GCA 90 bp | AAGCAGTCTCCCTGCAGAGGGACAGTCATGATTGACCACAGTAAACCCTCCTTCGGAGCCGCTTTCCCCTaGCTTCTGGCAAAAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KQSPCRGTVMIDHSKPSFGAAFP*LLAKAS Trigger: AGAAGCTTTTGCCAGAAGGCAGGGGAAAGCGGCTCC...GAAGGAGGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CCA 90 bp | AACCAGTGTGGCAGAGCACACAAAAGGCCCTGGGTCCTATCCCCAGCAGCAGAAACACTATGTCAATCATaGACACTGGCAGCACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: NQCGRAHKRPWVLSPAAETLCQS*TLAALG Trigger: TCCCAGTGCTGCCAGTGTCCATGATTGACATAGTGT...TTCTGCTGCTGGGGATAGGACCCAGGGCCTTTTGTGTGCTCTGCCACACTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CCA 90 bp | ATGAGAAGCAAGCTATCCCAGCAGGACACGTGTTCTGAGGAGGCCATGCCTGGTAAGAGATCTAGGAAGTaGCGGACACTTCGGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MRSKLSQQDTCSEEAMPGKRSRK*RTLREV Trigger: CACTTCCCGAAGTGTCCGCCACTTCCTAGATCTCTT...ACCAGGCATGGCCTCCTCAGAACACGTGTCCTGCTGGGATAGCTTGCTTCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCGAGCATCCAGATCCTTGGGAAAACACTGTCGTTGGCACTTCCAGCTATGCGAAGCTCCCGGTCCTaGACAAATCCTGCAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: LPSIQILGKTLSLALPAMRSSRS*TNPANI Trigger: GATGTTTGCAGGATTTGTCCAGGACCGGGAGCTTCG...CATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCCGAGCATCCAGATCCTTGGGAAAACACTGTCGTTGGCACTTCCAGCTATCTCCTGGACAAGGTCTaGACAGCAGACCGTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPEHPDPWENTVVGTSSYLLDKV*TADRVK Trigger: CTTTACACGGTCTGCTGTTCAGACCTTGTCCAGGAG...ATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAAGCAAGCTATCCCAGCAGGACACGTGTTCTGAGGAGGCCATGCCTGGTTGGTGCGCTGTCCTCTaGATCAGGAAAACAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: MRSKLSQQDTCSEEAMPGWCAVL*IRKTKP Trigger: AGGTTTTGTTTTCCTGATTCAGAGGACAGCGCACCA...ACCAGGCATGGCCTCCTCAGAACACGTGTCCTGCTGGGATAGCTTGCTTCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGAGGACCTCTGTGAGATCTTTGAGATTTGTGACATCAGGATTTGAGGCCTCGGCAGAGTTCAATTaGCTCATCTCCAGCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRRTSVRSLRFVTSGFEASAEFN*LISSPR Trigger: CCTGGGGCTGGAGATGAGTCAATTGAACTCTGCCGA...GGCCTCAAATCCTGATGTCACAAATCTCAAAGATCTCACAGAGGTCCTCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAAGCAAGCTATCCCAGCAGGACACGTGTTCTGAGGAGGCCATGCCTGGTGAAAACTGCTGTTCCTaGGCCAAGACTTCATCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: MRSKLSQQDTCSEEAMPGENCCS*AKTSSR Trigger: TCGAGATGAAGTCTTGGCTCAGGAACAGCAGTTTTC...ACCAGGCATGGCCTCCTCAGAACACGTGTCCTGCTGGGATAGCTTGCTTCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAAGCAAGCTATCCCAGCAGGACACGTGTTCTGAGGAGGCCATGCCTGGTCCCGCCATATTTCTTTaGTTCGGGATCCTGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MRSKLSQQDTCSEEAMPGPAIFL*FGILRR Trigger: TCTTCTCAGGATCCCGAACCAAAGAAATATGGCGGG...ACCAGGCATGGCCTCCTCAGAACACGTGTCCTGCTGGGATAGCTTGCTTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAAGCAAGCTATCCCAGCAGGACACGTGTTCTGAGGAGGCCATGCCTGGTACACTATGTCAATCATaGACACTGGCAGCACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MRSKLSQQDTCSEEAMPGTLCQS*TLAALG Trigger: TCCCAGTGCTGCCAGTGTCCATGATTGACATAGTGT...ACCAGGCATGGCCTCCTCAGAACACGTGTCCTGCTGGGATAGCTTGCTTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTCTCCCTGCAGAGGGACAGTCATGATTGACCACAGTAAACCCTCCTTCGGAAGGTCCTGGAGGTaGGGTAAGGAACAAGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQSPCRGTVMIDHSKPSFGRSWR*GKEQDK Trigger: CTTGTCTTGTTCCTTACCCCACCTCCAGGACCTTCC...GAAGGAGGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCACAGCGGAATGGCTCCCTTTaGAACACACGCTCCCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: GLQQQESFPTVFLLLQSQRNGSL*NTRSPR Trigger: GCGTGGGGAGCGTGTGTTCCAAAGGGAGCCATTCCG...CTGTGACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGTCTCCCTGCAGAGGGACAGTCATGATTGACCACAGTAAACCCTCCTTCTTTTGGACCGCCCTCTaGTCTTCCCGCCATATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQSPCRGTVMIDHSKPSFFWTAL*SSRHIS Trigger: AGAAATATGGCGGGAAGATCAGAGGGCGGTCCAAAA...GAAGGAGGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGAAGCAAGCTATCCCAGCAGGACACGTGTTCTGAGGAGGCCATGCCTGGTAAGAGTTCAAAGAGCTaGTGCTCCTGTAGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: MRSKLSQQDTCSEEAMPGKSSKS*CSCSSM Trigger: CATTGAGCTACAGGAGCAGCAGCTCTTTGAACTCTT...ACCAGGCATGGCCTCCTCAGAACACGTGTCCTGCTGGGATAGCTTGCTTCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCGAGCATCCAGATCCTTGGGAAAACACTGTCGTTGGCACTTCCAGCTATGAATCTGCACCAAGGCTaGTTGAAGTTTAGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSIQILGKTLSLALPAMNLHQG*LKFRWQ Trigger: CTGCCACCTAAACTTCAAGCAGCCTTGGTGCAGATT...CATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTCACTGACAAACTCCCTTTCCCAGGTGCTACTCCTACTTTAGATTTTCAGCCTTTAACTCCGCTTTaGCGAAGCTCCCGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLTDKLPFPGATPTLDFQPLTPL*RSSRSW Trigger: CCAGGACCGGGAGCTTCGGCAAAGCGGAGTTAAAGG...CTGAAAATCTAAAGTAGGAGTAGCACCTGGGAAAGGGAGTTTGTCAGTGAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCCGAGCATCCAGATCCTTGGGAAAACACTGTCGTTGGCACTTCCAGCTATGAAAGAACTGGGGTTTaGGAGGAAGCTTGGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPEHPDPWENTVVGTSSYERTGV*EEAWVF Trigger: GAACACCCAAGCTTCCTCCCAAACCCCAGTTCTTTC...ATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172288.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGGAGGACCTCTGTGAGATCTTTGAGATTTGTGACATCAGGATTTGAGGCCCGCTCTCGTTCCCACTaGTTTCACCTTTTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRRTSVRSLRFVTSGFEARSRSH*FHLLRR Trigger: CCTCCTCAAAAGGTGAAACCAGTGGGAACGAGAGCG...GGCCTCAAATCCTGATGTCACAAATCTCAAAGATCTCACAGAGGTCCTCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCCGGAATGGCTCCCTTTaGAACACACGCTCCCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: SWSAATGEFSNSLSPFTVRNGSL*NTRSPR Trigger: GCGTGGGGAGCGTGTGTTCCAAAGGGAGCCATTCCG...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTCTCCCTGCAGAGGGACAGTCATGATTGACCACAGTAAACCCTCCTTCTTCTATTCACCCCGCTaGGTTCCGACTCAGGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: KQSPCRGTVMIDHSKPSFFYSPR*VPTQEL Trigger: CAATTCCTGAGTCGGAACCCAGCGGGGTGAATAGAA...GAAGGAGGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | TTGAGATTTGTGACATCAGGATTTGAGGCCAGCCCGATCTACAGAACGAGTTCCACTGGTTTCACCTTTTaGGGAGGGGGCTTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRFVTSGFEASPIYRTSSTGFTF*GGGFLS Trigger: GGAAAGGAAGCCCCCTCCTCAAAAGGTGAAACCAGT...GGAACTCGTTCTGTAGATCGGGCTGGCCTCAAATCCTGATGTCACAAATCTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTCACTGACAAACTCCCTTTCCCAGGTGCTACTCCTACTTTAGATTTTCAGCCTGCCGGCTTCTTCTaGAGAGAAACCACCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLTDKLPFPGATPTLDFQPAGFF*RETTTK Trigger: CTTCGTGGTGGTTTCTCTGCAGAAGAAGCCGGCAGG...CTGAAAATCTAAAGTAGGAGTAGCACCTGGGAAAGGGAGTTTGTCAGTGAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCACAGCCCTTGCTAGGGAACTaGTGTATGACCTGGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLQQQESFPTVFLLLQSQPLLGN*CMTWGV Trigger: CACTCCCCAGGTCATACAGCAGTTCCCTAGCAAGGG...CTGTGACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR GCA 90 bp | TCATCAGAGCCAAAAAGGAAGCTCTGGTGTGCTCCACAGAGAACTTTAAACATCCCTTTAACTCCGCTTTaGCGAAGCTCCCGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSEPKRKLWCAPQRTLNIPLTPL*RSSRSW Trigger: CCAGGACCGGGAGCTTCGGCAAAGCGGAGTTAAAGG...GATGTTTAAAGTTCTCTGTGGAGCACACCAGAGCTTCCTTTTTGGCTCTGATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CCA 90 bp | GGCAGGAGGACCTCTGTGAGATCTTTGAGATTTGTGACATCAGGATTTGAGGCCGTCAATCATGGACACTaGCAGCACTGGGATGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRRTSVRSLRFVTSGFEAVNHGH*QHWDVG Trigger: ACCTACATCCCAGTGCTGCCAGTGTCCATGATTGAC...GGCCTCAAATCCTGATGTCACAAATCTCAAAGATCTCACAGAGGTCCTCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR TCA 90 bp | TTGAGATTTGTGACATCAGGATTTGAGGCCAGCCCGATCTACAGAACGAGTTCCGAGTGTCACCTCTTGTaGAAACTGCTGTTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRFVTSGFEASPIYRTSSECHLL*KLLFLS Trigger: GCTCAGGAACAGCAGTTTTCACAAGAGGTGACACTC...GGAACTCGTTCTGTAGATCGGGCTGGCCTCAAATCCTGATGTCACAAATCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCCCCTTGCTAGGGAACTaGTGTATGACCTGGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWSAATGEFSNSLSPFTVPLLGN*CMTWGV Trigger: CACTCCCCAGGTCATACAGCAGTTCCCTAGCAAGGG...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CCA 90 bp | TTGAGATTTGTGACATCAGGATTTGAGGCCAGCCCGATCTACAGAACGAGTTCCCCCACAGCAACAGCTTaGCAGCCTTCGATTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRFVTSGFEASPIYRTSSPTATA*QPSICL Trigger: CAAACAAATCGAAGGCTGCCAAGCTGTTGCTGTGGG...GGAACTCGTTCTGTAGATCGGGCTGGCCTCAAATCCTGATGTCACAAATCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCGTGGGACTTCCGGAATaGCTCCCTTTGGAACACACG | + |
|
Preference number: 4 (lower is better) Translates to: SWSAATGEFSNSLSPFTVVGLPE*LPLEHT Trigger: CGTGTGTTCCAAAGGGAGCCATTCCGGAAGTCCCAC...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CCA 90 bp | GGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCACAGCGAAGCTCCCGGTCCTaGACAAATCCTGCAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: GLQQQESFPTVFLLLQSQRSSRS*TNPANI Trigger: GATGTTTGCAGGATTTGTCCAGGACCGGGAGCTTCG...CTGTGACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR TCA 90 bp | TCATCAGAGCCAAAAAGGAAGCTCTGGTGTGCTCCACAGAGAACTTTAAACATCTTTGGTTCGGGATCCTaGGAAGAGGCCAAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSEPKRKLWCAPQRTLNIFGSGS*EEAKEG Trigger: CCCTTCTTTGGCCTCTTCTCAGGATCCCGAACCAAA...GATGTTTAAAGTTCTCTGTGGAGCACACCAGAGCTTCCTTTTTGGCTCTGATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR TCA 90 bp | AAACAACACTTTCCAAGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGGCTCCTGTAGCTCAATaGGGTCGCGCTCCAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQHFPSLNEYFPCQVKQWAPVAQ*GRAPRS Trigger: AGACCTTGGAGCGCGACCTCATTGAGCTACAGGAGC...CCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR TCA 90 bp | AAACAACACTTTCCAAGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGCACATGTTCCAGGCGTaGATCGAGTGGTCGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQHFPSLNEYFPCQVKQWHMFQA*IEWSAE Trigger: CTCTGCCGACCACTCGATTCACGCCTGGAACATGTG...CCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCCAGACCCGGATGAGATaGCGCACACTCAAGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWSAATGEFSNSLSPFTVQTRMR*RTLKHL Trigger: CAAATGCTTGAGTGTGCGTCATCTCATCCGGGTCTG...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTCTCCCTGCAGAGGGACAGTCATGATTGACCACAGTAAACCCTCCTTCCACTCCAAAGTCCTTTaGGTGAAACTTAGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQSPCRGTVMIDHSKPSFHSKVL*VKLSCL Trigger: AAGACAGCTAAGTTTCACCCAAAGGACTTTGGAGTG...GAAGGAGGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCCGCTCTCGTTCCCACTaGTTTCACCTTTTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SWSAATGEFSNSLSPFTVRSRSH*FHLLRR Trigger: CCTCCTCAAAAGGTGAAACCAGTGGGAACGAGAGCG...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AAACAACACTTTCCAAGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGGGACACTGGCAGCACTaGGATGTAGGTGTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQHFPSLNEYFPCQVKQWGHWQH*DVGVLP Trigger: TGGCAGCACACCTACATCCCAGTGCTGCCAGTGTCC...CCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTCACTGACAAACTCCCTTTCCCAGGTGCTACTCCTACTTTAGATTTTCAGGTCAATCATGGACACTaGCAGCACTGGGATGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLTDKLPFPGATPTLDFQVNHGH*QHWDVG Trigger: ACCTACATCCCAGTGCTGCCAGTGTCCATGATTGAC...CTGAAAATCTAAAGTAGGAGTAGCACCTGGGAAAGGGAGTTTGTCAGTGAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | AAACAACACTTTCCAAGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGTCGGCAGAGTTCAATTaGCTCATCTCCAGCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQHFPSLNEYFPCQVKQWSAEFN*LISSPR Trigger: CCTGGGGCTGGAGATGAGTCAATTGAACTCTGCCGA...CCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTCACTGACAAACTCCCTTTCCCAGGTGCTACTCCTACTTTAGATTTTCAGAATCTGCACCAAGGCTaGTTGAAGTTTAGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLTDKLPFPGATPTLDFQNLHQG*LKFRWQ Trigger: CTGCCACCTAAACTTCAAGCAGCCTTGGTGCAGATT...CTGAAAATCTAAAGTAGGAGTAGCACCTGGGAAAGGGAGTTTGTCAGTGAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGATTTGTGACATCAGGATTTGAGGCCAGCCCGATCTACAGAACGAGTTCCTTTCCTCAGTGTCTTTaGACTGCTTGTAGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRFVTSGFEASPIYRTSSFPQCL*TACSHG Trigger: ACCATGGCTACAAGCAGTCCAAAGACACTGAGGAAA...GGAACTCGTTCTGTAGATCGGGCTGGCCTCAAATCCTGATGTCACAAATCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCGTAGCTACCACAGCATaGCCGCATTTTGAAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWSAATGEFSNSLSPFTVVATTA*PHFERV Trigger: CACCCTTTCAAAATGCGGCCATGCTGTGGTAGCTAC...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AAACAACACTTTCCAAGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGACACTTCGGGAAGTGTaGGACTTCCGGAATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQHFPSLNEYFPCQVKQWTLREV*DFRNGS Trigger: GGAGCCATTCCGGAAGTCCCACACTTCCCGAAGTGT...CCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | AAACAACACTTTCCAAGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGCTCCTGGACAAGGTCTaGACAGCAGACCGTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQHFPSLNEYFPCQVKQWLLDKV*TADRVK Trigger: CTTTACACGGTCTGCTGTTCAGACCTTGTCCAGGAG...CCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | ACCCTCACTGACAAACTCCCTTTCCCAGGTGCTACTCCTACTTTAGATTTTCAGCCAAAGTCCTTTGGGTaGAACTTAGCTGTCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLTDKLPFPGATPTLDFQPKSFG*NLAVLV Trigger: AACCAAGACAGCTAAGTTTCACCCAAAGGACTTTGG...CTGAAAATCTAAAGTAGGAGTAGCACCTGGGAAAGGGAGTTTGTCAGTGAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | AAACAACACTTTCCAAGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGTTTGGTTCGGGATCCTaGGAAGAGGCCAAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQHFPSLNEYFPCQVKQWFGSGS*EEAKEG Trigger: CCCTTCTTTGGCCTCTTCTCAGGATCCCGAACCAAA...CCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | AAACAACACTTTCCAAGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGCAGACCCGGATGAGATaGCGCACACTCAAGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQHFPSLNEYFPCQVKQWQTRMR*RTLKHL Trigger: CAAATGCTTGAGTGTGCGTCATCTCATCCGGGTCTG...CCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | TCATCAGAGCCAAAAAGGAAGCTCTGGTGTGCTCCACAGAGAACTTTAAACATCGAAAACTGCTGTTCCTaGGCCAAGACTTCATCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSEPKRKLWCAPQRTLNIENCCS*AKTSSR Trigger: TCGAGATGAAGTCTTGGCTCAGGAACAGCAGTTTTC...GATGTTTAAAGTTCTCTGTGGAGCACACCAGAGCTTCCTTTTTGGCTCTGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCACATCTGTGTCTCCATaGAGAGATCTAGGAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SWSAATGEFSNSLSPFTVTSVSP*RDLGSG Trigger: GCCACTTCCTAGATCTCTTCATGGAGACACAGATGT...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGAGGACCTCTGTGAGATCTTTGAGATTTGTGACATCAGGATTTGAGGCCATTGTTTCCAAATATTaGAGAGCCCGGACTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRRTSVRSLRFVTSGFEAIVSKY*RARTSN Trigger: GTTTGAAGTCCGGGCTCTTCAATATTTGGAAACAAT...GGCCTCAAATCCTGATGTCACAAATCTCAAAGATCTCACAGAGGTCCTCCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | ATTTACCACAACATTTCTCACTTATCAATGAAAACTGTACCCTCACTGACAAACCCAGCTTCCGAGGGGTaGGAGCCTCTACACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IYHNISHLSMKTVPSLTNPASEG*EPLHSP Trigger: TGGAGAGTGTAGAGGCTCCCACCCCTCGGAAGCTGG...GTTTGTCAGTGAGGGTACAGTTTTCATTGATAAGTGAGAAATGTTGTGGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCCCCGCCATATTTCTTTaGTTCGGGATCCTGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SWSAATGEFSNSLSPFTVPAIFL*FGILRR Trigger: TCTTCTCAGGATCCCGAACCAAAGAAATATGGCGGG...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTCACTGACAAACTCCCTTTCCCAGGTGCTACTCCTACTTTAGATTTTCAGCTTTCCCCTGCCTTCTaGCAAAAGCTTCTTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLTDKLPFPGATPTLDFQLSPAF*QKLLTV Trigger: TACTGTAAGAAGCTTTTGCCAGAAGGCAGGGGAAAG...CTGAAAATCTAAAGTAGGAGTAGCACCTGGGAAAGGGAGTTTGTCAGTGAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGGCAAAGGTTACAGAAGACACTTCGCATGAATaGGTACACAAGGGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLNEYFPCQVKQWAKVTEDTSHE*VHKGWR Trigger: TCTCCAGCCCTTGTGTACCCATTCATGCGAAGTGTC...TTCTGTAACCTTTGCCCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| 3UTR CAA 72 bp | CTCCCGAGCATCCAGATCCTTGGGAAAACACTGTCGTaGGCACTTCCAGCTATGTTTAGAATGAAGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSIQILGKTLS*ALPAMFRMKKR Trigger: TCTTTTCTTCATTCTAAACATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| 3UTR CAA 72 bp | CAGTTCTCTTCCCTGGACCCATGTGTGGGAACTATATaGCACAGCACCAGTCTTAAATGGATTCATTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QFSSLDPCVGTI*HSTSLKWIHSD Trigger: GTCTGAATGAATCCATTTAAGACTGGTGCTGTGCAATATAGTTCCCACACATGGGTCCAGGGAAGAGAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTAAACCCTCCTTCCCCATCTTATAAACAACCAGTCATGAATTGTTCCATCTTTTGGACCGCCCTCTaGTCTTCCCGCCATATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVNPPSPSYKQPVMNCSIFWTAL*SSRHIS Trigger: AGAAATATGGCGGGAAGATCAGAGGGCGGTCCAAAA...GATGGAACAATTCATGACTGGTTGTTTATAAGATGGGGAAGGAGGGTTTACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCTTTGTATGTGTTCATAAGGCTCCTGTAGCTCAATaGGGTCGCGCTCCAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKSSFTAVGLTSFVCVHKAPVAQ*GRAPRS Trigger: AGACCTTGGAGCGCGACCTCATTGAGCTACAGGAGC...CTTATGAACACATACAAAGCTGGTTAGTCCTACAGCTGTAAATGAACTCTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | ACCCTCACTGACAAACTCCCTTTCCCAGGTGCTACTCCTACTTTAGATTTTCAGGCACACTCAAGCATTTaGAAAGGCATTCAAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLTDKLPFPGATPTLDFQAHSSI*KGIQSP Trigger: TGGACTTTGAATGCCTTTTCAAATGCTTGAGTGTGC...CTGAAAATCTAAAGTAGGAGTAGCACCTGGGAAAGGGAGTTTGTCAGTGAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | ACCCTCACTGACAAACTCCCTTTCCCAGGTGCTACTCCTACTTTAGATTTTCAGAAAGAACGGAGTAGGTaGGCACACTATGTCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLTDKLPFPGATPTLDFQKERSR*AHYVNH Trigger: ATGATTGACATAGTGTGCTCACCTACTCCGTTCTTT...CTGAAAATCTAAAGTAGGAGTAGCACCTGGGAAAGGGAGTTTGTCAGTGAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | TCATTCAGACACCCTAGTATGAGTGACAATGACAATACTATACAAGTCAGTGAGGCTCCCCACGCTCTGTaGCAGTCATGTTCAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFRHPSMSDNDNTIQVSEAPHAL*QSCSEN Trigger: ATTCTCTGAACATGACTGTCACAGAGCGTGGGGAGC...CTCACTGACTTGTATAGTATTGTCATTGTCACTCATACTAGGGTGTCTGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | TTGAGATTTGTGACATCAGGATTTGAGGCCAGCCCGATCTACAGAACGAGTTCCATTGTTTCCAAATATTaGAGAGCCCGGACTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRFVTSGFEASPIYRTSSIVSKY*RARTSN Trigger: GTTTGAAGTCCGGGCTCTTCAATATTTGGAAACAAT...GGAACTCGTTCTGTAGATCGGGCTGGCCTCAAATCCTGATGTCACAAATCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTCACTGACAAACTCCCTTTCCCAGGTGCTACTCCTACTTTAGATTTTCAGCTTCCAAGTTCTTCATaGATCTTTCGTGAGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TLTDKLPFPGATPTLDFQLPSSS*IFREFR Trigger: TCGGAACTCACGAAAGATCCATGAAGAACTTGGAAG...CTGAAAATCTAAAGTAGGAGTAGCACCTGGGAAAGGGAGTTTGTCAGTGAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCTTTCCTCAGTGTCTTTaGACTGCTTGTAGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SWSAATGEFSNSLSPFTVFPQCL*TACSHG Trigger: ACCATGGCTACAAGCAGTCCAAAGACACTGAGGAAA...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | GAGAACTTTAAACATCACTATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGGGACACTGGCAGCACTaGGATGTAGGTGTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENFKHHYKEFIYSCRTNQGHWQH*DVGVLP Trigger: TGGCAGCACACCTACATCCCAGTGCTGCCAGTGTCC...CTGGTTAGTCCTACAGCTGTAAATGAACTCTTTATAGTGATGTTTAAAGTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGATTTGTGACATCAGGATTTGAGGCCAGCCCGATCTACAGAACGAGTTCCTGCTTGAAGTTTAGGTaGCAGAATTTCATCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LRFVTSGFEASPIYRTSSCLKFR*QNFILI Trigger: GATGAGGATGAAATTCTGCCACCTAAACTTCAAGCA...GGAACTCGTTCTGTAGATCGGGCTGGCCTCAAATCCTGATGTCACAAATCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | ACAATACTATACAAGTCAGTGAGTTGTATCCCAGTACAACAAACAACACTTTCCGTGGGACTTCCGGAATaGCTCCCTTTGGAACACACG | + |
|
Preference number: 4 (lower is better) Translates to: TILYKSVSCIPVQQTTLSVGLPE*LPLEHT Trigger: CGTGTGTTCCAAAGGGAGCCATTCCGGAAGTCCCAC...GGAAAGTGTTGTTTGTTGTACTGGGATACAACTCACTGACTTGTATAGTATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AAACAACACTTTCCAAGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGTTCTATTCACCCCGCTaGGTTCCGACTCAGGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: KQHFPSLNEYFPCQVKQWFYSPR*VPTQEL Trigger: CAATTCCTGAGTCGGAACCCAGCGGGGTGAATAGAA...CCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | AAACAACACTTTCCAAGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGACATCTGTGTCTCCATaGAGAGATCTAGGAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQHFPSLNEYFPCQVKQWTSVSP*RDLGSG Trigger: GCCACTTCCTAGATCTCTTCATGGAGACACAGATGT...CCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACTTGGAAAGTGTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGGCAAAGGTTACAGAAAAGAGTTCAAAGAGCTaGTGCTCCTGTAGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLNEYFPCQVKQWAKVTEKSSKS*CSCSSM Trigger: CATTGAGCTACAGGAGCAGCAGCTCTTTGAACTCTT...TTCTGTAACCTTTGCCCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | TCATTCAGACACCCTAGTATGAGTGACAATGACAATACTATACAAGTCAGTGAGGTAGCTACCACAGCATaGCCGCATTTTGAAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFRHPSMSDNDNTIQVSEVATTA*PHFERV Trigger: CACCCTTTCAAAATGCGGCCATGCTGTGGTAGCTAC...CTCACTGACTTGTATAGTATTGTCATTGTCACTCATACTAGGGTGTCTGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | TCATTCAGACACCCTAGTATGAGTGACAATGACAATACTATACAAGTCAGTGAGTGGTGCGCTGTCCTCTaGATCAGGAAAACAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SFRHPSMSDNDNTIQVSEWCAVL*IRKTKP Trigger: AGGTTTTGTTTTCCTGATTCAGAGGACAGCGCACCA...CTCACTGACTTGTATAGTATTGTCATTGTCACTCATACTAGGGTGTCTGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCTTTGTATGTGTTCATAAGGGAAGGTCCTGGAGGTaGGGTAAGGAACAAGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: IKSSFTAVGLTSFVCVHKGRSWR*GKEQDK Trigger: CTTGTCTTGTTCCTTACCCCACCTCCAGGACCTTCC...CTTATGAACACATACAAAGCTGGTTAGTCCTACAGCTGTAAATGAACTCTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCTGCTTGAAGTTTAGGTaGCAGAATTTCATCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SWSAATGEFSNSLSPFTVCLKFR*QNFILI Trigger: GATGAGGATGAAATTCTGCCACCTAAACTTCAAGCA...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | ATTTACCACAACATTTCTCACTTATCAATGAAAACTGTACCCTCACTGACAAACTCCATAGTCTTCCGCTaGAAGAACTGGGGTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IYHNISHLSMKTVPSLTNSIVFR*KNWGLG Trigger: TCCCAAACCCCAGTTCTTTCAGCGGAAGACTATGGA...GTTTGTCAGTGAGGGTACAGTTTTCATTGATAAGTGAGAAATGTTGTGGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172288.3 |
||
| CDS-3UTR TCA 90 bp | ACAGTAAACCCTCCTTCCCCATCTTATAAACAACCAGTCATGAATTGTTCCATCAAAGAACGGAGTAGGTaGGCACACTATGTCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVNPPSPSYKQPVMNCSIKERSR*AHYVNH Trigger: ATGATTGACATAGTGTGCTCACCTACTCCGTTCTTT...GATGGAACAATTCATGACTGGTTGTTTATAAGATGGGGAAGGAGGGTTTACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | ATTTACCACAACATTTCTCACTTATCAATGAAAACTGTACCCTCACTGACAAACGAGTGTCACCTCTTGTaGAAACTGCTGTTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IYHNISHLSMKTVPSLTNECHLL*KLLFLS Trigger: GCTCAGGAACAGCAGTTTTCACAAGAGGTGACACTC...GTTTGTCAGTGAGGGTACAGTTTTCATTGATAAGTGAGAAATGTTGTGGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR GCA 90 bp | TCATTCAGACACCCTAGTATGAGTGACAATGACAATACTATACAAGTCAGTGAGGTCCTGGACAAATCCTaGAAACATCTGTGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFRHPSMSDNDNTIQVSEVLDKS*KHLCLH Trigger: ATGGAGACACAGATGTTTGCAGGATTTGTCCAGGAC...CTCACTGACTTGTATAGTATTGTCATTGTCACTCATACTAGGGTGTCTGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCGAGTTCCGAAAGTGCTaGATATCTTCAAATTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SWSAATGEFSNSLSPFTVEFRKC*ISSNSK Trigger: CTTTGAATTTGAAGATATCCAGCACTTTCGGAACTC...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCTTTGTATGTGTTCATAAGAAGAGATCTAGGAAGTaGCGGACACTTCGGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IKSSFTAVGLTSFVCVHKKRSRK*RTLREV Trigger: CACTTCCCGAAGTGTCCGCCACTTCCTAGATCTCTT...CTTATGAACACATACAAAGCTGGTTAGTCCTACAGCTGTAAATGAACTCTTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR TCA 90 bp | ACAATACTATACAAGTCAGTGAGTTGTATCCCAGTACAACAAACAACACTTTCCGGGAAATCTTCTGTTTaGTGTTTTTGCAGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TILYKSVSCIPVQQTTLSGKSSV*CFCSGS Trigger: GGAGCCACTGCAAAAACATCAAACAGAAGATTTCCC...GGAAAGTGTTGTTTGTTGTACTGGGATACAACTCACTGACTTGTATAGTATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTGAATGAGTATTTTCCATGCCAGGTAAAGCAGTGGGCAAAGGTTACAGAATTTCAAAACAAGCGGTaGGAGATTTCTCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLNEYFPCQVKQWAKVTEFQNKR*EISLLL Trigger: AAGAAGAAGAGAAATCTCCCACCGCTTGTTTTGAAA...TTCTGTAACCTTTGCCCACTGCTTTACCTGGCATGGAAAATACTCATTCAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172288.3 |
||
| CDS-3UTR TCA 90 bp | ATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCTTTGTATGTGTTCATAAGGGGAAATCTTCTGTTTaGTGTTTTTGCAGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKSSFTAVGLTSFVCVHKGKSSV*CFCSGS Trigger: GGAGCCACTGCAAAAACATCAAACAGAAGATTTCCC...CTTATGAACACATACAAAGCTGGTTAGTCCTACAGCTGTAAATGAACTCTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCTTTGTATGTGTTCATAAGCAAACAGGGAACGACTaGACTGGGATATCTTCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IKSSFTAVGLTSFVCVHKQTGND*TGISSY Trigger: ATACGAAGATATCCCAGTGCAGTCGTTCCCTGTTTG...CTTATGAACACATACAAAGCTGGTTAGTCCTACAGCTGTAAATGAACTCTTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR GCA 90 bp | GAGAACTTTAAACATCACTATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCAAACAGGGAACGACTaGACTGGGATATCTTCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ENFKHHYKEFIYSCRTNQQTGND*TGISSY Trigger: ATACGAAGATATCCCAGTGCAGTCGTTCCCTGTTTG...CTGGTTAGTCCTACAGCTGTAAATGAACTCTTTATAGTGATGTTTAAAGTTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR GCA 90 bp | GAGAACTTTAAACATCACTATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGGTCCTGGACAAATCCTaGAAACATCTGTGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ENFKHHYKEFIYSCRTNQVLDKS*KHLCLH Trigger: ATGGAGACACAGATGTTTGCAGGATTTGTCCAGGAC...CTGGTTAGTCCTACAGCTGTAAATGAACTCTTTATAGTGATGTTTAAAGTTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTAAACCCTCCTTCCCCATCTTATAAACAACCAGTCATGAATTGTTCCATCGAGTTCCGAAAGTGCTaGATATCTTCAAATTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVNPPSPSYKQPVMNCSIEFRKC*ISSNSK Trigger: CTTTGAATTTGAAGATATCCAGCACTTTCGGAACTC...GATGGAACAATTCATGACTGGTTGTTTATAAGATGGGGAAGGAGGGTTTACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | ACAATACTATACAAGTCAGTGAGTTGTATCCCAGTACAACAAACAACACTTTCCCTTCCAAGTTCTTCATaGATCTTTCGTGAGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TILYKSVSCIPVQQTTLSLPSSS*IFREFR Trigger: TCGGAACTCACGAAAGATCCATGAAGAACTTGGAAG...GGAAAGTGTTGTTTGTTGTACTGGGATACAACTCACTGACTTGTATAGTATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCTTTGTATGTGTTCATAAGCTTTCCCCTGCCTTCTaGCAAAAGCTTCTTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IKSSFTAVGLTSFVCVHKLSPAF*QKLLTV Trigger: TACTGTAAGAAGCTTTTGCCAGAAGGCAGGGGAAAG...CTTATGAACACATACAAAGCTGGTTAGTCCTACAGCTGTAAATGAACTCTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTAAACATCACTATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCACTCCAAAGTCCTTTaGGTGAAACTTAGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ENFKHHYKEFIYSCRTNQHSKVL*VKLSCL Trigger: AAGACAGCTAAGTTTCACCCAAAGGACTTTGGAGTG...CTGGTTAGTCCTACAGCTGTAAATGAACTCTTTATAGTGATGTTTAAAGTTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS GCA 90 bp | CAAGGTCTGGTAGTGGGGGTTCCTCTTGGAGGACGGCTGCAGCTGTaGCAAGCGCTTGTGGCGATTCTTTGGCAGGTACTCGGCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QGLVVGVPLGGRLQL*QALVAILWQVLGIA Trigger: AGCGATGCCGAGTACCTGCCAAAGAATCGCCACAAGCGCTTGGCACAGCTGCAGCCGTCCTCCAAGAGGAACCCCCACTACCAGACCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS TCA 90 bp | CTTGGGTGTTCGGAAGGCGCTCTTAGCAGGTGGCAGCCTCCACGCTaGAGGGGATCTCCAAACAGGGAACGACTGCACTGGGATATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGCSEGALSRWQPPR*RGSPNRERLHWDIF Trigger: GAAGATATCCCAGTGCAGTCGTTCCCTGTTTGGAGATCCCCTTCAGCGTGGAGGCTGCCACCTGCTAAGAGCGCCTTCCGAACACCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 90 bp | CTTGGAGGACGGCTGCAGCTGTGCCAAGCGCTTGTGGCGATTCTTTaGCAGGTACTCGGCATCGCTCTCGTTCCCACTGGTTTCACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGGRLQLCQALVAIL*QVLGIALVPTGFTF Trigger: AAAGGTGAAACCAGTGGGAACGAGAGCGATGCCGAGTACCTGCCAAAGAATCGCCACAAGCGCTTGGCACAGCTGCAGCCGTCCTCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS CCA 90 bp | AAGTTTCCTGGCGGTAAGGAAGCCTCTGGACCCACAGCAACAGCTTaGCAGCCTTCGATTTGTTTGACCCGAGCACACACCAGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KFPGGKEASGPTATA*QPSICLTRAHTRLE Trigger: CTCCAGCCTGGTGTGTGCTCGGGTCAAACAAATCGAAGGCTGCCAAGCTGTTGCTGTGGGTCCAGAGGCTTCCTTACCGCCAGGAAACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 90 bp | TGGCGGACACTTCGGGAAGTGTGGGACTTCCGGAATGGCTCCCTTTaGAACACACGCTCCCCACGCTCTGTGACAGTCATGTTCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WRTLREVWDFRNGSL*NTRSPRSVTVMFRE Trigger: TTCTCTGAACATGACTGTCACAGAGCGTGGGGAGCGTGTGTTCCAAAGGGAGCCATTCCGGAAGTCCCACACTTCCCGAAGTGTCCGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS TCA 90 bp | AAACCACCACGAAGAGTTCAAAGAGCTGCTGCTCCTGTAGCTCAATaGGGTCGCGCTCCAAGGTCTGGTAGTGGGGGTTCCTCTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPPRRVQRAAAPVAQ*GRAPRSGSGGSSWR Trigger: CCTCCAAGAGGAACCCCCACTACCAGACCTTGGAGCGCGACCTCATTGAGCTACAGGAGCAGCAGCTCTTTGAACTCTTCGTGGTGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS GCA 90 bp | GTCACCCTTGCTAGGGAACTGCTGTATGACCTGGGGAGTGTACCCTaGCGGCTTCTTCTGCAGAGAAACCACCACGAAGAGTTCAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VTLARELLYDLGSVP*RLLLQRNHHEEFKE Trigger: CTCTTTGAACTCTTCGTGGTGGTTTCTCTGCAGAAGAAGCCGGCAGGGTACACTCCCCAGGTCATACAGCAGTTCCCTAGCAAGGGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 90 bp | TGTGGCGATTCTTTGGCAGGTACTCGGCATCGCTCTCGTTCCCACTaGTTTCACCTTTTGAGGAGGGGGCTTCCTTTCCAGTGTAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CGDSLAGTRHRSRSH*FHLLRRGLPFQCKA Trigger: AGCCTTACACTGGAAAGGAAGCCCCCTCCTCAAAAGGTGAAACCAGTGGGAACGAGAGCGATGCCGAGTACCTGCCAAAGAATCGCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS TCA 90 bp | ACTTCCGGAATGGCTCCCTTTGGAACACACGCTCCCCACGCTCTGTaGCAGTCATGTTCAGAGAATAATGCCCCACGAGCTCCACAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSGMAPFGTHAPHAL*QSCSENNAPRAPQK Trigger: TTTTTGTGGAGCTCGTGGGGCATTATTCTCTGAACATGACTGTCACAGAGCGTGGGGAGCGTGTGTTCCAAAGGGAGCCATTCCGGAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 90 bp | GGATTTCCTTTTGGACCGCCCTCTGATCTTCCCGCCATATTTCTTTaGTTCGGGATCCTGAGAAGAGGCCAAAGAAGGGTCCACACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GFPFGPPSDLPAIFL*FGILRRGQRRVHTG Trigger: TCCTGTGTGGACCCTTCTTTGGCCTCTTCTCAGGATCCCGAACCAAAGAAATATGGCGGGAAGATCAGAGGGCGGTCCAAAAGGAAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | TTGAGATTTGTGACATCAGGATTTGAGGCCAGCCCGATCTACAGAACGAGTTCCGCTTGTGGCGATTCTTaGGCAGGTACTCGGCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRFVTSGFEASPIYRTSSACGDS*AGTRHR Trigger: GCGATGCCGAGTACCTGCCAAAGAATCGCCACAAGC...GGAACTCGTTCTGTAGATCGGGCTGGCCTCAAATCCTGATGTCACAAATCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCCCGGAATGGCTCCCTTaGGAACACACGCTCCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SWSAATGEFSNSLSPFTVPEWLP*EHTLPT Trigger: CGTGGGGAGCGTGTGTTCCAAAGGGAGCCATTCCGG...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | TCTCCCGAGCATCCAGATCCTTGGGAAAACACTGTCGTTGGCACTTCCAGCTATTCCCGCCATATTTCTTaGGTTCGGGATCCTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPEHPDPWENTVVGTSSYSRHIS*VRDPEK Trigger: CTTCTCAGGATCCCGAACCAAAGAAATATGGCGGGA...ATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | ACCCTCACTGACAAACTCCCTTTCCCAGGTGCTACTCCTACTTTAGATTTTCAGGCTTGTGGCGATTCTTaGGCAGGTACTCGGCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: TLTDKLPFPGATPTLDFQACGDS*AGTRHR Trigger: GCGATGCCGAGTACCTGCCAAAGAATCGCCACAAGC...CTGAAAATCTAAAGTAGGAGTAGCACCTGGGAAAGGGAGTTTGTCAGTGAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | TCTCCCGAGCATCCAGATCCTTGGGAAAACACTGTCGTTGGCACTTCCAGCTATCAGCATGGCCGCATTTaGAAAGGGTGCTTAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPEHPDPWENTVVGTSSYQHGRI*KGCLSC Trigger: ACAGCTTAAGCACCCTTTCAAAATGCGGCCATGCTG...ATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | TCTCCCGAGCATCCAGATCCTTGGGAAAACACTGTCGTTGGCACTTCCAGCTATCTGCACCAAGGCTGCTaGAAGTTTAGGTGGCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SPEHPDPWENTVVGTSSYLHQGC*KFRWQN Trigger: ATTCTGCCACCTAAACTTCAAGCAGCCTTGGTGCAG...ATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGCTCGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | ACCCTCACTGACAAACTCCCTTTCCCAGGTGCTACTCCTACTTTAGATTTTCAGACCTTTAACTCCGCTTaGCCGAAGCTCCCGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLTDKLPFPGATPTLDFQTFNSA*PKLPVL Trigger: CAGGACCGGGAGCTTCGGCAAAGCGGAGTTAAAGGT...CTGAAAATCTAAAGTAGGAGTAGCACCTGGGAAAGGGAGTTTGTCAGTGAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 90 bp | CAGAGATCAACTATCAGCACCTCCTCAATCGGAAGGTCCTGGAGGTaGGGTAAGGAACAAGACAAGATCCCGATAAAGAACGGAGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QRSTISTSSIGRSWR*GKEQDKIPIKNGVG Trigger: ACCTACTCCGTTCTTTATCGGGATCTTGTCTTGTTCCTTACCCCACCTCCAGGACCTTCCGATTGAGGAGGTGCTGATAGTTGATCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 90 bp | TCTGCACAGAGATCAACTATCAGCACCTCCTCAATCGGAAGGTCCTaGAGGTGGGGTAAGGAACAAGACAAGATCCCGATAAAGAACGGA | + |
|
Preference number: 5 (lower is better) Translates to: SAQRSTISTSSIGRS*RWGKEQDKIPIKNG Trigger: TCCGTTCTTTATCGGGATCTTGTCTTGTTCCTTACCCCACCTCCAGGACCTTCCGATTGAGGAGGTGCTGATAGTTGATCTCTGTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCACCTTTAACTCCGCTTaGCCGAAGCTCCCGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SWSAATGEFSNSLSPFTVTFNSA*PKLPVL Trigger: CAGGACCGGGAGCTTCGGCAAAGCGGAGTTAAAGGT...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS TCA 90 bp | GGACTCTCTTGGTGGCAGTTATACCTCACTCCAAAGTCCTTTGGGTaGAACTTAGCTGTCTTGGTTACACCGTTAGCTCTTCCTTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GLSWWQLYLTPKSFG*NLAVLVTPLALPSH Trigger: GTGGGAAGGAAGAGCTAACGGTGTAACCAAGACAGCTAAGTTTCACCCAAAGGACTTTGGAGTGAGGTATAACTGCCACCAAGAGAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 90 bp | AGGGGGACTCTCTTGGTGGCAGTTATACCTCACTCCAAAGTCCTTTaGGTGAAACTTAGCTGTCTTGGTTACACCGTTAGCTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGTLLVAVIPHSKVL*VKLSCLGYTVSSSF Trigger: GAAGGAAGAGCTAACGGTGTAACCAAGACAGCTAAGTTTCACCCAAAGGACTTTGGAGTGAGGTATAACTGCCACCAAGAGAGTCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | TCATTCAGACACCCTAGTATGAGTGACAATGACAATACTATACAAGTCAGTGAGCCGGAATGGCTCCCTTaGGAACACACGCTCCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SFRHPSMSDNDNTIQVSEPEWLP*EHTLPT Trigger: CGTGGGGAGCGTGTGTTCCAAAGGGAGCCATTCCGG...CTCACTGACTTGTATAGTATTGTCATTGTCACTCATACTAGGGTGTCTGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS TCA 90 bp | CTATTCACCCCGCTGGGTTCCGACTCAGGAATTGTTTCCAAATATTaGAGAGCCCGGACTTCAAACAAACCTTTAACTCCGCTTTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LFTPLGSDSGIVSKY*RARTSNKPLTPLCR Trigger: TCGGCAAAGCGGAGTTAAAGGTTTGTTTGAAGTCCGGGCTCTTCAATATTTGGAAACAATTCCTGAGTCGGAACCCAGCGGGGTGAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | AAGCAGTCTCCCTGCAGAGGGACAGTCATGATTGACCACAGTAAACCCTCCTTCTGGGAAATCTTCTGTTaGATGTTTTTGCAGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KQSPCRGTVMIDHSKPSFWEIFC*MFLQWL Trigger: GAGCCACTGCAAAAACATCAAACAGAAGATTTCCCA...GAAGGAGGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCCACTGGTTTCACCTTTaGAGGAGGGGGCTTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SWSAATGEFSNSLSPFTVHWFHL*RRGLPF Trigger: GAAAGGAAGCCCCCTCCTCAAAAGGTGAAACCAGTG...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | GCATCCAGATCCTTGGGAAAACACTGTCGTTGGCACTTCCAGCTATGTTTAGAATCAAAGGATTTCCTTTaGGACCGCCCTCTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASRSLGKHCRWHFQLCLESKDFL*DRPLIF Trigger: GAAGATCAGAGGGCGGTCCAAAAGGAAATCCTTTGA...TTCTAAACATAGCTGGAAGTGCCAACGACAGTGTTTTCCCAAGGATCTGGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS TCA 90 bp | GCCAAGACTTCATCTCGATCTTCTAAAATCTGCACCAAGGCTGCTTaGAGTTTAGGTGGCAGAATTTCATCCTCATCAGACACCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AKTSSRSSKICTKAA*SLGGRISSSSDTSC Trigger: ACAGGAGGTGTCTGATGAGGATGAAATTCTGCCACCTAAACTTCAAGCAGCCTTGGTGCAGATTTTAGAAGATCGAGATGAAGTCTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCCGCACACTCAAGCATTaGAAAAGGCATTCAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SWSAATGEFSNSLSPFTVRTLKH*KRHSKS Trigger: GGACTTTGAATGCCTTTTCAAATGCTTGAGTGTGCG...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | ACAGTAAACCCTCCTTCCCCATCTTATAAACAACCAGTCATGAATTGTTCCATCCTGCACCAAGGCTGCTaGAAGTTTAGGTGGCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TVNPPSPSYKQPVMNCSILHQGC*KFRWQN Trigger: ATTCTGCCACCTAAACTTCAAGCAGCCTTGGTGCAG...GATGGAACAATTCATGACTGGTTGTTTATAAGATGGGGAAGGAGGGTTTACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCTGGGAAATCTTCTGTTaGATGTTTTTGCAGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SWSAATGEFSNSLSPFTVWEIFC*MFLQWL Trigger: GAGCCACTGCAAAAACATCAAACAGAAGATTTCCCA...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | AGTTGGTCTGCAGCAACAGGAGAGTTTTCCAACAGTCTTTCTCCTTTTACAGTCATCTTTGAGAAAAGATaGAAGCAGCCCAAGCGACTA | + |
|
Preference number: 5 (lower is better) Translates to: SWSAATGEFSNSLSPFTVIFEKR*KQPKRL Trigger: TAGTCGCTTGGGCTGCTTCAATCTTTTCTCAAAGAT...GACTGTAAAAGGAGAAAGACTGTTGGAAAACTCTCCTGTTGCTGCAGACCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS GCA 90 bp | GCATTTCTTCCAAGTTCTTCATGGATCTTTCGTGAGTTCCGAAAGTaGTGGATATCTTCAAATTCAAAGGATTTCCTTTTGGACCGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AFLPSSSWIFREFRK*WISSNSKDFLLDRP Trigger: AGGGCGGTCCAAAAGGAAATCCTTTGAATTTGAAGATATCCAGCACTTTCGGAACTCACGAAAGATCCATGAAGAACTTGGAAGAAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 90 bp | TTTCTTCCAAGTTCTTCATGGATCTTTCGTGAGTTCCGAAAGTGCTaGATATCTTCAAATTCAAAGGATTTCCTTTTGGACCGCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLPSSSWIFREFRKC*ISSNSKDFLLDRPL Trigger: CAGAGGGCGGTCCAAAAGGAAATCCTTTGAATTTGAAGATATCCAGCACTTTCGGAACTCACGAAAGATCCATGAAGAACTTGGAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS-3UTR CAA 90 bp | ACAGTAAACCCTCCTTCCCCATCTTATAAACAACCAGTCATGAATTGTTCCATCAGATTTCTCTTCTTCTaGTTAGCCACCTCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVNPPSPSYKQPVMNCSIRFLFF*LATSPA Trigger: AGCTGGAGAGGTGGCTAACAAGAAGAAGAGAAATCT...GATGGAACAATTCATGACTGGTTGTTTATAAGATGGGGAAGGAGGGTTTACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172288.3 |
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| CDS-3UTR CAA 90 bp | ATTTACCACAACATTTCTCACTTATCAATGAAAACTGTACCCTCACTGACAAACCACTGGTTTCACCTTTaGAGGAGGGGGCTTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IYHNISHLSMKTVPSLTNHWFHL*RRGLPF Trigger: GAAAGGAAGCCCCCTCCTCAAAAGGTGAAACCAGTG...GTTTGTCAGTGAGGGTACAGTTTTCATTGATAAGTGAGAAATGTTGTGGTAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS CCA 90 bp | AGGGGATCTCCAAACAGGGAACGACTGCACTGGGATATCTTCGTATaGATTTTCCTTGGCTGGATATATAATATCCTCATAGATATTATC | + |
|
Preference number: 5 (lower is better) Translates to: RGSPNRERLHWDIFV*IFLGWIYNILIDII Trigger: GATAATATCTATGAGGATATTATATATCCAGCCAAGGAAAATCCATACGAAGATATCCCAGTGCAGTCGTTCCCTGTTTGGAGATCCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CAA 90 bp | ATTTACCACAACATTTCTCACTTATCAATGAAAACTGTACCCTCACTGACAAACTCCCGCCATATTTCTTaGGTTCGGGATCCTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IYHNISHLSMKTVPSLTNSRHIS*VRDPEK Trigger: CTTCTCAGGATCCCGAACCAAAGAAATATGGCGGGA...GTTTGTCAGTGAGGGTACAGTTTTCATTGATAAGTGAGAAATGTTGTGGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCTTTGTATGTGTTCATAAGCAGCATGGCCGCATTTaGAAAGGGTGCTTAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IKSSFTAVGLTSFVCVHKQHGRI*KGCLSC Trigger: ACAGCTTAAGCACCCTTTCAAAATGCGGCCATGCTG...CTTATGAACACATACAAAGCTGGTTAGTCCTACAGCTGTAAATGAACTCTTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CAA 90 bp | GAGAACTTTAAACATCACTATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCGCACACTCAAGCATTaGAAAAGGCATTCAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ENFKHHYKEFIYSCRTNQRTLKH*KRHSKS Trigger: GGACTTTGAATGCCTTTTCAAATGCTTGAGTGTGCG...CTGGTTAGTCCTACAGCTGTAAATGAACTCTTTATAGTGATGTTTAAAGTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAGAGTTCATTTACAGCTGTAGGACTAACCAGCTTTGTATGTGTTCATAAGATCTTTGAGAAAAGATaGAAGCAGCCCAAGCGACTA | + |
|
Preference number: 5 (lower is better) Translates to: IKSSFTAVGLTSFVCVHKIFEKR*KQPKRL Trigger: TAGTCGCTTGGGCTGCTTCAATCTTTTCTCAAAGAT...CTTATGAACACATACAAAGCTGGTTAGTCCTACAGCTGTAAATGAACTCTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS CCA 72 bp | GGTCGCGCTCCAAGGTCTGGTAGTGGGGGTTCCTCTTaGAGGACGGCTGCAGCTGTGCCAAGCGCTTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRAPRSGSGGSS*RTAAAVPSACG Trigger: GCCACAAGCGCTTGGCACAGCTGCAGCCGTCCTCCAAGAGGAACCCCCACTACCAGACCTTGGAGCGCGACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 72 bp | CACACCAGGCTGGAGTCCAGTCCAGCTTCCGAGGGGTaGGAGCCTCTACACTCTCCACCCTCGCCTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: HTRLESSPASEG*EPLHSPPSPSS Trigger: GGATGAAGGCGAGGGTGGAGAGTGTAGAGGCTCCCACCCCTCGGAAGCTGGACTGGACTCCAGCCTGGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 72 bp | CGGCTGCAGCTGTGCCAAGCGCTTGTGGCGATTCTTTaGCAGGTACTCGGCATCGCTCTCGTTCCCACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RLQLCQALVAIL*QVLGIALVPTG Trigger: ACCAGTGGGAACGAGAGCGATGCCGAGTACCTGCCAAAGAATCGCCACAAGCGCTTGGCACAGCTGCAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 72 bp | CTCTTGGAGGACGGCTGCAGCTGTGCCAAGCGCTTGTaGCGATTCTTTGGCAGGTACTCGGCATCGCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLEDGCSCAKRL*RFFGRYSASLS Trigger: CGAGAGCGATGCCGAGTACCTGCCAAAGAATCGCCACAAGCGCTTGGCACAGCTGCAGCCGTCCTCCAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 72 bp | GTGGCGGACACTTCGGGAAGTGTGGGACTTCCGGAATaGCTCCCTTTGGAACACACGCTCCCCACGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VADTSGSVGLPE*LPLEHTLPTLC Trigger: ACAGAGCGTGGGGAGCGTGTGTTCCAAAGGGAGCCATTCCGGAAGTCCCACACTTCCCGAAGTGTCCGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS GCA 72 bp | GTAGTGGGGGTTCCTCTTGGAGGACGGCTGCAGCTGTaGCAAGCGCTTGTGGCGATTCTTTGGCAGGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: VVGVPLGGRLQL*QALVAILWQVL Trigger: GAGTACCTGCCAAAGAATCGCCACAAGCGCTTGGCACAGCTGCAGCCGTCCTCCAAGAGGAACCCCCACTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 72 bp | TTCCTCTTGGAGGACGGCTGCAGCTGTGCCAAGCGCTaGTGGCGATTCTTTGGCAGGTACTCGGCATCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FLLEDGCSCAKR*WRFFGRYSASL Trigger: GAGCGATGCCGAGTACCTGCCAAAGAATCGCCACAAGCGCTTGGCACAGCTGCAGCCGTCCTCCAAGAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 90 bp | TCTTGGAGGACGGCTGCAGCTGTGCCAAGCGCTTGTGGCGATTCTTaGGCAGGTACTCGGCATCGCTCTCGTTCCCACTGGTTTCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SWRTAAAVPSACGDS*AGTRHRSRSHWFHL Trigger: AAGGTGAAACCAGTGGGAACGAGAGCGATGCCGAGTACCTGCCAAAGAATCGCCACAAGCGCTTGGCACAGCTGCAGCCGTCCTCCAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 90 bp | GTGGCGGACACTTCGGGAAGTGTGGGACTTCCGGAATGGCTCCCTTaGGAACACACGCTCCCCACGCTCTGTGACAGTCATGTTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VADTSGSVGLPEWLP*EHTLPTLCDSHVQR Trigger: TCTCTGAACATGACTGTCACAGAGCGTGGGGAGCGTGTGTTCCAAAGGGAGCCATTCCGGAAGTCCCACACTTCCCGAAGTGTCCGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS TCA 72 bp | GACCCACAGCAACAGCTTGGCAGCCTTCGATTTGTTTaGCCCGAGCACACACCAGGCTGGAGTCCAGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DPQQQLGSLRFV*PEHTPGWSPVQ Trigger: CTGGACTGGACTCCAGCCTGGTGTGTGCTCGGGTCAAACAAATCGAAGGCTGCCAAGCTGTTGCTGTGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 72 bp | GGCGGTAAGGAAGCCTCTGGACCCACAGCAACAGCTTaGCAGCCTTCGATTTGTTTGACCCGAGCACACACC | + |
|
Preference number: 6 (lower is better) Translates to: GGKEASGPTATA*QPSICLTRAHT Trigger: GGTGTGTGCTCGGGTCAAACAAATCGAAGGCTGCCAAGCTGTTGCTGTGGGTCCAGAGGCTTCCTTACCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 72 bp | CTTCGGGAAGTGTGGGACTTCCGGAATGGCTCCCTTTaGAACACACGCTCCCCACGCTCTGTGACAGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LREVWDFRNGSL*NTRSPRSVTVM Trigger: CATGACTGTCACAGAGCGTGGGGAGCGTGTGTTCCAAAGGGAGCCATTCCGGAAGTCCCACACTTCCCGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 72 bp | GGACCCACAGCAACAGCTTGGCAGCCTTCGATTTGTTaGACCCGAGCACACACCAGGCTGGAGTCCAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPTATAWQPSIC*TRAHTRLESSP Trigger: TGGACTGGACTCCAGCCTGGTGTGTGCTCGGGTCAAACAAATCGAAGGCTGCCAAGCTGTTGCTGTGGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS TCA 72 bp | CGAAGAGTTCAAAGAGCTGCTGCTCCTGTAGCTCAATaGGGTCGCGCTCCAAGGTCTGGTAGTGGGGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRVQRAAAPVAQ*GRAPRSGSGGS Trigger: GGAACCCCCACTACCAGACCTTGGAGCGCGACCTCATTGAGCTACAGGAGCAGCAGCTCTTTGAACTCTTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS GCA 72 bp | GCTAGGGAACTGCTGTATGACCTGGGGAGTGTACCCTaGCGGCTTCTTCTGCAGAGAAACCACCACGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ARELLYDLGSVP*RLLLQRNHHEE Trigger: CTCTTCGTGGTGGTTTCTCTGCAGAAGAAGCCGGCAGGGTACACTCCCCAGGTCATACAGCAGTTCCCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 72 bp | ACTTCGGGAAGTGTGGGACTTCCGGAATGGCTCCCTTaGGAACACACGCTCCCCACGCTCTGTGACAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TSGSVGLPEWLP*EHTLPTLCDSH Trigger: ATGACTGTCACAGAGCGTGGGGAGCGTGTGTTCCAAAGGGAGCCATTCCGGAAGTCCCACACTTCCCGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 72 bp | TCTTTGGCAGGTACTCGGCATCGCTCTCGTTCCCACTaGTTTCACCTTTTGAGGAGGGGGCTTCCTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLAGTRHRSRSH*FHLLRRGLPFQ Trigger: CTGGAAAGGAAGCCCCCTCCTCAAAAGGTGAAACCAGTGGGAACGAGAGCGATGCCGAGTACCTGCCAAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 72 bp | AAGAGATCTAGGAAGTGGCGGACACTTCGGGAAGTGTaGGACTTCCGGAATGGCTCCCTTTGGAACACACGC | + |
|
Preference number: 6 (lower is better) Translates to: KRSRKWRTLREV*DFRNGSLWNTR Trigger: GCGTGTGTTCCAAAGGGAGCCATTCCGGAAGTCCCACACTTCCCGAAGTGTCCGCCACTTCCTAGATCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS TCA 72 bp | ATGGCTCCCTTTGGAACACACGCTCCCCACGCTCTGTaGCAGTCATGTTCAGAGAATAATGCCCCACGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: MAPFGTHAPHAL*QSCSENNAPRA Trigger: AGCTCGTGGGGCATTATTCTCTGAACATGACTGTCACAGAGCGTGGGGAGCGTGTGTTCCAAAGGGAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS GCA 72 bp | TGCAGAGAAACCACCACGAAGAGTTCAAAGAGCTGCTaGTCCTGTAGCTCAATGAGGTCGCGCTCCAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CRETTTKSSKSC*SCSSMRSRSKV Trigger: GACCTTGGAGCGCGACCTCATTGAGCTACAGGAGCAGCAGCTCTTTGAACTCTTCGTGGTGGTTTCTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS GCA 72 bp | TGTATGACCTGGGGAGTGTACCCTGCCGGCTTCTTCTaGAGAGAAACCACCACGAAGAGTTCAAAGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CMTWGVYPAGFF*RETTTKSSKSC Trigger: GCAGCTCTTTGAACTCTTCGTGGTGGTTTCTCTGCAGAAGAAGCCGGCAGGGTACACTCCCCAGGTCATACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 72 bp | ACTCGGCATCGCTCTCGTTCCCACTGGTTTCACCTTTaGAGGAGGGGGCTTCCTTTCCAGTGTAAGGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: TRHRSRSHWFHL*RRGLPFQCKAV Trigger: TACAGCCTTACACTGGAAAGGAAGCCCCCTCCTCAAAAGGTGAAACCAGTGGGAACGAGAGCGATGCCGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS GCA 72 bp | AGAGCCCGGACTTCAAACAAACCTTTAACTCCGCTTTaGCGAAGCTCCCGGTCCTGGACAAATCCTGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: RARTSNKPLTPL*RSSRSWTNPAN Trigger: GTTTGCAGGATTTGTCCAGGACCGGGAGCTTCGGCAAAGCGGAGTTAAAGGTTTGTTTGAAGTCCGGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 72 bp | TTTGGACCGCCCTCTGATCTTCCCGCCATATTTCTTTaGTTCGGGATCCTGAGAAGAGGCCAAAGAAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FGPPSDLPAIFL*FGILRRGQRRV Trigger: GACCCTTCTTTGGCCTCTTCTCAGGATCCCGAACCAAAGAAATATGGCGGGAAGATCAGAGGGCGGTCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 72 bp | TTCCTCACCAGTGGGACGCTTATGAGGGGGACTCTCTaGGTGGCAGTTATACCTCACTCCAAAGTCCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: FLTSGTLMRGTL*VAVIPHSKVLW Trigger: CCAAAGGACTTTGGAGTGAGGTATAACTGCCACCAAGAGAGTCCCCCTCATAAGCGTCCCACTGGTGAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 90 bp | CCCATTCCTTTCCTCACCAGTGGGACGCTTATGAGGGGGACTCTCTaGGTGGCAGTTATACCTCACTCCAAAGTCCTTTGGGTGAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: PIPFLTSGTLMRGTL*VAVIPHSKVLWVKL Trigger: AAGTTTCACCCAAAGGACTTTGGAGTGAGGTATAACTGCCACCAAGAGAGTCCCCCTCATAAGCGTCCCACTGGTGAGGAAAGGAATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS TCA 72 bp | CGCTCGAGAAGGAGAGAGGCACAGACCCGGATGAGATaGCGCACACTCAAGCATTTGAAAAGGCATTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RSRRREAQTRMR*RTLKHLKRHSK Trigger: CTTTGAATGCCTTTTCAAATGCTTGAGTGTGCGTCATCTCATCCGGGTCTGTGCCTCTCTCCTTCTCGAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 72 bp | AAGAGCCCGGACTTCAAACAAACCTTTAACTCCGCTTaGCCGAAGCTCCCGGTCCTGGACAAATCCTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: KSPDFKQTFNSA*PKLPVLDKSCK Trigger: TTTGCAGGATTTGTCCAGGACCGGGAGCTTCGGCAAAGCGGAGTTAAAGGTTTGTTTGAAGTCCGGGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS TCA 72 bp | CCTCTACACTCTCCACCCTCGCCTTCATCCTCACTTTaGTCTCGGCTTTTGACATCCGTGTTTCTGGGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: PLHSPPSPSSSL*SRLLTSVFLGK Trigger: TTTACCCAGAAACACGGATGTCAAAAGCCGAGATCAAAGTGAGGATGAAGGCGAGGGTGGAGAGTGTAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 72 bp | ACTATCAGCACCTCCTCAATCGGAAGGTCCTGGAGGTaGGGTAAGGAACAAGACAAGATCCCGATAAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TISTSSIGRSWR*GKEQDKIPIKN Trigger: GTTCTTTATCGGGATCTTGTCTTGTTCCTTACCCCACCTCCAGGACCTTCCGATTGAGGAGGTGCTGATAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 72 bp | AGATCAACTATCAGCACCTCCTCAATCGGAAGGTCCTaGAGGTGGGGTAAGGAACAAGACAAGATCCCGATA | + |
|
Preference number: 6 (lower is better) Translates to: RSTISTSSIGRS*RWGKEQDKIPI Trigger: TATCGGGATCTTGTCTTGTTCCTTACCCCACCTCCAGGACCTTCCGATTGAGGAGGTGCTGATAGTTGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS GCA 72 bp | CCAAATTTAAGGGTTTATCTGGGGAGAGCCCGTCTATaGTTCTCCACGGTATCTGGGAGGTGTAGAAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PNLRVYLGRARL*FSTVSGRCRSF Trigger: GAAACTTCTACACCTCCCAGATACCGTGGAGAAGCATAGACGGGCTCTCCCCAGATAAACCCTTAAATTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 90 bp | CAAATATTGAAGAGCCCGGACTTCAAACAAACCTTTAACTCCGCTTaGCCGAAGCTCCCGGTCCTGGACAAATCCTGCAAACATCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QILKSPDFKQTFNSA*PKLPVLDKSCKHLC Trigger: ACACAGATGTTTGCAGGATTTGTCCAGGACCGGGAGCTTCGGCAAAGCGGAGTTAAAGGTTTGTTTGAAGTCCGGGCTCTTCAATATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 90 bp | TCTATTCACCCCGCTGGGTTCCGACTCAGGAATTGTTTCCAAATATaGAAGAGCCCGGACTTCAAACAAACCTTTAACTCCGCTTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SIHPAGFRLRNCFQI*KSPDFKQTFNSALP Trigger: CGGCAAAGCGGAGTTAAAGGTTTGTTTGAAGTCCGGGCTCTTCAATATTTGGAAACAATTCCTGAGTCGGAACCCAGCGGGGTGAATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS TCA 72 bp | CCGCTGGGTTCCGACTCAGGAATTGTTTCCAAATATTaGAGAGCCCGGACTTCAAACAAACCTTTAACTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PLGSDSGIVSKY*RARTSNKPLTP Trigger: CGGAGTTAAAGGTTTGTTTGAAGTCCGGGCTCTTCAATATTTGGAAACAATTCCTGAGTCGGAACCCAGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CCA 72 bp | CTCTTGGTGGCAGTTATACCTCACTCCAAAGTCCTTTaGGTGAAACTTAGCTGTCTTGGTTACACCGTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLVAVIPHSKVL*VKLSCLGYTVS Trigger: GCTAACGGTGTAACCAAGACAGCTAAGTTTCACCCAAAGGACTTTGGAGTGAGGTATAACTGCCACCAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 72 bp | CCCGCTGGGTTCCGACTCAGGAATTGTTTCCAAATATaGAAGAGCCCGGACTTCAAACAAACCTTTAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: PAGFRLRNCFQI*KSPDFKQTFNS Trigger: GGAGTTAAAGGTTTGTTTGAAGTCCGGGCTCTTCAATATTTGGAAACAATTCCTGAGTCGGAACCCAGCGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS TCA 72 bp | TGGTGGCAGTTATACCTCACTCCAAAGTCCTTTGGGTaGAACTTAGCTGTCTTGGTTACACCGTTAGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: WWQLYLTPKSFG*NLAVLVTPLAL Trigger: AAGAGCTAACGGTGTAACCAAGACAGCTAAGTTTCACCCAAAGGACTTTGGAGTGAGGTATAACTGCCACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS TCA 72 bp | CTTCAAATTCAAAGGATTTCCTTTTGGACCGCCCTCTaGTCTTCCCGCCATATTTCTTTGGTTCGGGATCCT | + |
|
Preference number: 6 (lower is better) Translates to: LQIQRISFWTAL*SSRHISLVRDP Trigger: AGGATCCCGAACCAAAGAAATATGGCGGGAAGATCAGAGGGCGGTCCAAAAGGAAATCCTTTGAATTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 72 bp | CTCTTCTCTACTTCATCCAGGATCTTTGAGAAAAGATaGAAGCAGCCCAAGCGACTAACCATGCAGTACACC | + |
|
Preference number: 6 (lower is better) Translates to: LFSTSSRIFEKR*KQPKRLTMQYT Trigger: GGTGTACTGCATGGTTAGTCGCTTGGGCTGCTTCAATCTTTTCTCAAAGATCCTGGATGAAGTAGAGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS TCA 72 bp | GAACTGAGTGTCACCTCTTGTGAAAACTGCTGTTCCTaGGCCAAGACTTCATCTCGATCTTCTAAAATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ELSVTSCENCCS*AKTSSRSSKIC Trigger: GCAGATTTTAGAAGATCGAGATGAAGTCTTGGCTCAGGAACAGCAGTTTTCACAAGAGGTGACACTCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
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| CDS CAA 72 bp | AAATTCTATTCACCCCGCTGGGTTCCGACTCAGGAATaGTTTCCAAATATTGAAGAGCCCGGACTTCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: KFYSPRWVPTQE*FPNIEEPGLQT Trigger: TGTTTGAAGTCCGGGCTCTTCAATATTTGGAAACAATTCCTGAGTCGGAACCCAGCGGGGTGAATAGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS CAA 90 bp | GTATCATTTATTTTCAAAACAAGCGGTGGGAGATTTCTCTTCTTCTaGTTAGCCACCTCTCCAGCTCGGAACAGTTTCCATTCCGTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: VSFIFKTSGGRFLFF*LATSPARNSFHSVR Trigger: CCTAACGGAATGGAAACTGTTCCGAGCTGGAGAGGTGGCTAACAAGAAGAAGAGAAATCTCCCACCGCTTGTTTTGAAAATAAATGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172288.3 |
||
| CDS CCA 72 bp | CCAAACAGGGAACGACTGCACTGGGATATCTTCGTATaGATTTTCCTTGGCTGGATATATAATATCCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: PNRERLHWDIFV*IFLGWIYNILI Trigger: TATGAGGATATTATATATCCAGCCAAGGAAAATCCATACGAAGATATCCCAGTGCAGTCGTTCCCTGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS TCA 72 bp | GCCAGCATTTCTTCCAAGTTCTTCATGGATCTTTCGTaGGTTCCGAAAGTGCTGGATATCTTCAAATTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ASISSKFFMDLS*VPKVLDIFKFK Trigger: TTTGAATTTGAAGATATCCAGCACTTTCGGAACTCACGAAAGATCCATGAAGAACTTGGAAGAAATGCTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS CCA 72 bp | TACTTCCAAGACTACGTAAAATTCTATTCACCCCGCTaGGTTCCGACTCAGGAATTGTTTCCAAATATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: YFQDYVKFYSPR*VPTQELFPNIE Trigger: TTCAATATTTGGAAACAATTCCTGAGTCGGAACCCAGCGGGGTGAATAGAATTTTACGTAGTCTTGGAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS GCA 72 bp | CCAAGTTCTTCATGGATCTTTCGTGAGTTCCGAAAGTaGTGGATATCTTCAAATTCAAAGGATTTCCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PSSSWIFREFRK*WISSNSKDFLL Trigger: CAAAAGGAAATCCTTTGAATTTGAAGATATCCAGCACTTTCGGAACTCACGAAAGATCCATGAAGAACTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172288.3 ENSMUST00000173206.8 |
||
| CDS CCA 72 bp | AGATTCAAATGTATCATTTATTTTCAAAACAAGCGGTaGGAGATTTCTCTTCTTCTTGTTAGCCACCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RFKCIIYFQNKR*EISLLLVSHLS Trigger: GGAGAGGTGGCTAACAAGAAGAAGAGAAATCTCCCACCGCTTGTTTTGAAAATAAATGATACATTTGAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172288.3 |
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