Pregenerated sensors for DENND1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002668Ensembl transcript IDs: ENSMUST00000011623.9, ENSMUST00000233564.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTCTCTGACGCCGCCCCTCGCTGACAGCAGTCTAAGCTCTGGCTaGCCCTCTGCAGGTCGCCACTCTTGGTTTCCACGTTCAGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: SSLTPPLADSSLSSG*PSAGRHSWFPRSGC Trigger: ACAGCCTGAACGTGGAAACCAAGAGTGGCGACCTGCAGAGGGCCAGCCAGAGCTTAGACTGCTGTCAGCGAGGGGCGGCGTCAGAGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR TCA 90 bp | AGACAAGGGCATCACGGTACCCTCCAAAGAGCAGGGCCTGCACTTTaGGGAAGAGACGGGACACCCCTTCCCCAGGGCTCAGGGCAACCT | + |
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Preference number: 1 (lower is better) Translates to: RQGHHGTLQRAGPAL*GRDGTPLPQGSGQP Trigger: AGGTTGCCCTGAGCCCTGGGGAAGGGGTGTCCCGTCTCTTCCTCAAAGTGCAGGCCCTGCTCTTTGGAGGGTACCGTGATGCCCTTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR GCA 90 bp | GTCTTGAGTCTCCTGCTGGGGCGGAGGGGCCTGTTCTGTCCAAAGTaGTGGCTAATAGGCAGGCGCTGTTGCAGACGATCAGAGCGGCTG | + |
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Preference number: 1 (lower is better) Translates to: VLSLLLGRRGLFCPK*WLIGRRCCRRSERL Trigger: CAGCCGCTCTGATCGTCTGCAACAGCGCCTGCCTATTAGCCAGCACTTTGGACAGAACAGGCCCCTCCGCCCCAGCAGGAGACTCAAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR CCA 90 bp | GTAGGTGTGGGGGTAGAGTGGGGATCAGAACGTGCTCCCAGCGCATaGGGTAGAGCAGGGCACAGGATGCGTGAACACAGGCTGTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: VGVGVEWGSERAPSA*GRAGHRMREHRLSE Trigger: CTCTGACAGCCTGTGTTCACGCATCCTGTGCCCTGCTCTACCCCATGCGCTGGGAGCACGTTCTGATCCCCACTCTACCCCCACACCTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR CCA 90 bp | CTTCTTCCAGTTGCCATGGTAACCCCACTGGGATGTCAGGCAGGCTaGAGCAGCTCTCTGACGCCGCCCCTCGCTGACAGCAGTCTAAGC | + |
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Preference number: 1 (lower is better) Translates to: LLPVAMVTPLGCQAG*SSSLTPPLADSSLS Trigger: GCTTAGACTGCTGTCAGCGAGGGGCGGCGTCAGAGAGCTGCTCCAGCCTGCCTGACATCCCAGTGGGGTTACCATGGCAACTGGAAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR GCA 90 bp | GATCAGAACGTGCTCCCAGCGCATGGGGTAGAGCAGGGCACAGGATaGGTGAACACAGGCTGTCAGAGTGCTGAGCTTGCTGGCAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: DQNVLPAHGVEQGTG*VNTGCQSAELAGSE Trigger: CTCACTGCCAGCAAGCTCAGCACTCTGACAGCCTGTGTTCACGCATCCTGTGCCCTGCTCTACCCCATGCGCTGGGAGCACGTTCTGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR CCA 90 bp | GGTCCGGACTCCACACCTTACTTCCCACCTCAGGTTGCCTTCTGCTaGGCAGCCTCCTTCCTCTCTGTGCCTCCAGTTTTAACCAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GPDSTPYFPPQVAFC*AASFLSVPPVLTKP Trigger: GGGCTTGGTTAAAACTGGAGGCACAGAGAGGAAGGAGGCTGCCCAGCAGAAGGCAACCTGAGGTGGGAAGTAAGGTGTGGAGTCCGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR GCA 90 bp | ATGGCAGGCTGGCGGCATCCGGAGCCACAAAACAAGAAAGCAGCTTaGTATTCCCCAGGGCAGGAGGCAAGATTCCACATTCACTCCGGA | + |
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Preference number: 1 (lower is better) Translates to: MAGWRHPEPQNKKAA*YSPGQEARFHIHSG Trigger: TCCGGAGTGAATGTGGAATCTTGCCTCCTGCCCTGGGGAATAGCAAGCTGCTTTCTTGTTTTGTGGCTCCGGATGCCGCCAGCCTGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR GCA 90 bp | CCCCTCTGCAGGCCAGAGTCTCCATCCTTAATCGTGAGCAGGTTCTaGATACCCTTCAAGCCACTCTTTGCCGATCGGTACATGTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PLCRPESPSLIVSRF*IPFKPLFADRYMFL Trigger: CAGGAACATGTACCGATCGGCAAAGAGTGGCTTGAAGGGTATGCAGAACCTGCTCACGATTAAGGATGGAGACTCTGGCCTGCAGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR TCA 90 bp | CCCAGGAGGACCTGGGGAGGCTGGTTTCTGGGGTTCTCTGCAGAATaGGAGCATGAGGGAGACGAAATGGATTGTAATCTTTGGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: PRRTWGGWFLGFSAE*EHEGDEMDCNLWTA Trigger: TGCTGTCCAAAGATTACAATCCATTTCGTCTCCCTCATGCTCTCATTCTGCAGAGAACCCCAGAAACCAGCCTCCCCAGGTCCTCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR CCA 90 bp | AGGCAAGATTCCACATTCACTCCGGACAGTGATGCTGCTGTCCTGTaGGACGAGAGTAACATCTCTGATCTTCCTGAAAACCGGGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: RQDSTFTPDSDAAVL*DESNISDLPENRGP Trigger: TGGACCCCGGTTTTCAGGAAGATCAGAGATGTTACTCTCGTCCCACAGGACAGCAGCATCACTGTCCGGAGTGAATGTGGAATCTTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR CCA 90 bp | TTCAAGCCACTCTTTGCCGATCGGTACATGTTCCTGACAGCTGGTTaGGTTTTTGTCTTCATTGAATGCAGAAGGGCATCGCTACCTTTC | + |
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Preference number: 1 (lower is better) Translates to: FKPLFADRYMFLTAG*VFVFIECRRASLPF Trigger: GAAAGGTAGCGATGCCCTTCTGCATTCAATGAAGACAAAAACCCAACCAGCTGTCAGGAACATGTACCGATCGGCAAAGAGTGGCTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR GCA 90 bp | GTAAATGGTGAGGTGATGAAGTTGGTTATAAACAGGAACAGGGATTaGTTTTATTACCTTAAGACTATCTACCCAGAGCTGGTAAGACCG | + |
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Preference number: 1 (lower is better) Translates to: VNGEVMKLVINRNRD*FYYLKTIYPELVRP Trigger: CGGTCTTACCAGCTCTGGGTAGATAGTCTTAAGGTAATAAAAGCAATCCCTGTTCCTGTTTATAACCAACTTCATCACCTCACCATTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGCTAATAGGCAGGCGCTGTTGCAGACGATCAGAGCGGCTGGTGAGGCTTGCAGGGCCTGCACTTTaGGGAAGAGACGGGACACCC | + |
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Preference number: 2 (lower is better) Translates to: CWLIGRRCCRRSERLVRLAGPAL*GRDGTP Trigger: GGGTGTCCCGTCTCTTCCTCAAAGTGCAGGCCCTGC...AAGCCTCACCAGCCGCTCTGATCGTCTGCAACAGCGCCTGCCTATTAGCCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCTGCGTGCTTACATGAGAGACATAAGTGGGGGCTCCCAGCTCCTCGAGGGGGATGTCAGGCAGGCTaGAGCAGCTCTCTGACGCCG | + |
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Preference number: 2 (lower is better) Translates to: FAACLHERHKWGLPAPRGGCQAG*SSSLTP Trigger: CGGCGTCAGAGAGCTGCTCCAGCCTGCCTGACATCC...CCCTCGAGGAGCTGGGAGCCCCCACTTATGTCTCTCATGTAAGCACGCAGCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCAGCTAGCAGCGCTGCGAAGAGCCCCACGATGTTCTCATCTGTCACAGCGATTCACTCCGGACAGTaGTGCTGCTGTCCTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LSASSAAKSPTMFSSVTAIHSGQ*CCCPVG Trigger: TCCCACAGGACAGCAGCATCACTGTCCGGAGTGAAT...CGCTGTGACAGATGAGAACATCGTGGGGCTCTTCGCAGCGCTGCTAGCTGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | CTACCCAGAGCTGGTAAGACCGAAGGGTGCCTGAGGAAGCTCCGCGGCAGGCAAAGCCTTCCCCAGCATTaGGTTTTTCCAGTCGGGATT | + |
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Preference number: 2 (lower is better) Translates to: LPRAGKTEGCLRKLRGRQSLPQH*VFPVGI Trigger: AATCCCGACTGGAAAAACTCAATGCTGGGGAAGGCT...TTGCCTGCCGCGGAGCTTCCTCAGGCACCCTTCGGTCTTACCAGCTCTGGGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | CTACCCAGAGCTGGTAAGACCGAAGGGTGCCTGAGGAAGCTCCGCGGCAGGCAATTGCTCAAATTGGTCTaGGAAGCCTTCCCCAGCATT | + |
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Preference number: 2 (lower is better) Translates to: LPRAGKTEGCLRKLRGRQLLKLV*EAFPSI Trigger: AATGCTGGGGAAGGCTTCTCAGACCAATTTGAGCAA...TTGCCTGCCGCGGAGCTTCCTCAGGCACCCTTCGGTCTTACCAGCTCTGGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCACGATGTTCTCATCTGTCACAGCGACCACCAGCTCAGTGAGGTTCCTATTGCAAAGGTGAAATGCTaGACAGCAGGGCTGGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: PHDVLICHSDHQLSEVPIAKVKC*TAGLGG Trigger: GCCACCCAGCCCTGCTGTTCAGCATTTCACCTTTGC...AATAGGAACCTCACTGAGCTGGTGGTCGCTGTGACAGATGAGAACATCGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTGCGTGCTTACATGAGAGACATAAGTGGGGGCTCCCAGCTCCTCGAGGGGGGTTCTCTGCAGAATaGGAGCATGAGGGAGACGAA | + |
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Preference number: 2 (lower is better) Translates to: FAACLHERHKWGLPAPRGGFSAE*EHEGDE Trigger: TTCGTCTCCCTCATGCTCTCATTCTGCAGAGAACCC...CCCTCGAGGAGCTGGGAGCCCCCACTTATGTCTCTCATGTAAGCACGCAGCAAA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGCTAATAGGCAGGCGCTGTTGCAGACGATCAGAGCGGCTGGTGAGGCTTGATGCTGCTGTCCTGTaGGACGAGAGTAACATCTCT | + |
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Preference number: 2 (lower is better) Translates to: CWLIGRRCCRRSERLVRLDAAVL*DESNIS Trigger: AGAGATGTTACTCTCGTCCCACAGGACAGCAGCATC...AAGCCTCACCAGCCGCTCTGATCGTCTGCAACAGCGCCTGCCTATTAGCCAGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGATCTCTTGTCTTCTTCCAGTTGCCATGGTAACCCCACTGGGATGTCAGGCCAGGTTGCCTTCTGCTaGGCAGCCTCCTTCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: WDLLSSSSCHGNPTGMSGQVAFC*AASFLS Trigger: AGAGAGGAAGGAGGCTGCCCAGCAGAAGGCAACCTG...GCCTGACATCCCAGTGGGGTTACCATGGCAACTGGAAGAAGACAAGAGATCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACCAAGGCTGAGGATCCTGGGATCTCTTGTCTTCTTCCAGTTGCCATGGTATGTACCGCCTTTTTGTaGAATGCCTGCAGGGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: GTKAEDPGISCLLPVAMVCTAFL*NACRGA Trigger: GGCACCCCTGCAGGCATTCCACAAAAAGGCGGTACA...TACCATGGCAACTGGAAGAAGACAAGAGATCCCAGGATCCTCAGCCTTGGTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCTGCGTGCTTACATGAGAGACATAAGTGGGGGCTCCCAGCTCCTCGAGGGGGGGCTCTGCTGAAATaGCTGAGAACAGGAGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: FAACLHERHKWGLPAPRGGALLK*LRTGVL Trigger: AAGAACTCCTGTTCTCAGCCATTTCAGCAGAGCCCC...CCCTCGAGGAGCTGGGAGCCCCCACTTATGTCTCTCATGTAAGCACGCAGCAAA 54% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | GCGAAGAGCCCCACGATGTTCTCATCTGTCACAGCGACCACCAGCTCAGTGAGGGGTCCCCCACGTTATTaGGAATCTTGTAGAACACTT | + |
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Preference number: 2 (lower is better) Translates to: AKSPTMFSSVTATTSSVRGPPRY*ESCRTL Trigger: AAGTGTTCTACAAGATTCTCAATAACGTGGGGGACC...CCTCACTGAGCTGGTGGTCGCTGTGACAGATGAGAACATCGTGGGGCTCTTCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | GGGACCAAGGCTGAGGATCCTGGGATCTCTTGTCTTCTTCCAGTTGCCATGGTAAAAAAGCTTCCTCACTaGAGGTCACTGGCTGACCCG | + |
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Preference number: 2 (lower is better) Translates to: GTKAEDPGISCLLPVAMVKKLPH*RSLADP Trigger: CGGGTCAGCCAGTGACCTTCAGTGAGGAAGCTTTTT...TACCATGGCAACTGGAAGAAGACAAGAGATCCCAGGATCCTCAGCCTTGGTCCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGATCTCTTGTCTTCTTCCAGTTGCCATGGTAACCCCACTGGGATGTCAGGCATCGGTACATGTTCCTaGCAGCTGGTTGGGTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: WDLLSSSSCHGNPTGMSGIGTCS*QLVGFL Trigger: CAAAAACCCAACCAGCTGTCAGGAACATGTACCGAT...GCCTGACATCCCAGTGGGGTTACCATGGCAACTGGAAGAAGACAAGAGATCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR GCA 90 bp | GGGACCAAGGCTGAGGATCCTGGGATCTCTTGTCTTCTTCCAGTTGCCATGGTACAGGGTGTTAGAGTCTaGATTCAACACCACAACATC | + |
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Preference number: 2 (lower is better) Translates to: GTKAEDPGISCLLPVAMVQGVRV*IQHHNI Trigger: GATGTTGTGGTGTTGAATGCAGACTCTAACACCCTG...TACCATGGCAACTGGAAGAAGACAAGAGATCCCAGGATCCTCAGCCTTGGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTGAGGATCCTGGGATCTCTTGTCTTCTTCCAGTTGCCATGGTAACCCCAGGTTTTTGTCTTCATTaGATGCAGAAGGGCATCGCT | + |
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Preference number: 2 (lower is better) Translates to: KAEDPGISCLLPVAMVTPGFCLH*MQKGIA Trigger: AGCGATGCCCTTCTGCATTCAATGAAGACAAAAACC...TGGGGTTACCATGGCAACTGGAAGAAGACAAGAGATCCCAGGATCCTCAGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGTGACAGGTCACCAGGTAGGGACCAAGGCTGAGGATCCTGGGATCTCTTGTCTCTCAACTTTGATCTaGTTCAATTCTTACCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: EVTGHQVGTKAEDPGISCLSTLI*FNSYLS Trigger: GGAGAGGTAAGAATTGAAGCAGATCAAAGTTGAGAG...ACAAGAGATCCCAGGATCCTCAGCCTTGGTCCCTACCTGGTGACCTGTCACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCTGGTTGTACACAAGCCTaGCCCAGGAGGACCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RKRNSALLRVGNPSHSLSGCTQA*PRRTWG Trigger: TCCCCAGGTCCTCCTGGGCCAGGCTTGTGTACAACC...AGATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR CAA 90 bp | GCAATGATCTCTTGCTCAAATTGGTCTGAGAAGCCTTCCCCAGCATaGAGTTTTTCCAGTCGGGATTCGATGAACTGCTTGAACAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: AMISCSNWSEKPSPA*SFSSRDSMNCLNSC Trigger: GCAGCTGTTCAAGCAGTTCATCGAATCCCGACTGGAAAAACTCAATGCTGGGGAAGGCTTCTCAGACCAATTTGAGCAAGAGATCATTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | ACGAAATGGATTGTAATCTTTGGACAGCATCAGAGTTGGGCTCTGTGGAGACAACGACCACCAGCTCAGTaGGGTTCCTATTCTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: TKWIVIFGQHQSWALWRQRPPAQ*GSYSQE Trigger: TTCCTGAGAATAGGAACCTCACTGAGCTGGTGGTCG...TTGTCTCCACAGAGCCCAACTCTGATGCTGTCCAAAGATTACAATCCATTTCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAACTTTGATCTGCTTCAATTCTTACCTCTCCCGCAGGGGTTCGGAAGGTCCTTTGTCTTCATTGAATaGAGAAGGGCATCGCTACCT | + |
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Preference number: 2 (lower is better) Translates to: LNFDLLQFLPLPQGFGRSFVFIE*RRASLP Trigger: AGGTAGCGATGCCCTTCTGCATTCAATGAAGACAAA...GGACCTTCCGAACCCCTGCGGGAGAGGTAAGAATTGAAGCAGATCAAAGTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGGAGACGAAATGGATTGTAATCTTTGGACAGCATCAGAGTTGGGCTCTGTGGGCTGTGGTAAATGGTaGGGTGATGAAGTTGGTTAT | + |
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Preference number: 2 (lower is better) Translates to: EGDEMDCNLWTASELGSVGCGKW*GDEVGY Trigger: ATAACCAACTTCATCACCTCACCATTTACCACAGCC...CACAGAGCCCAACTCTGATGCTGTCCAAAGATTACAATCCATTTCGTCTCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR GCA 90 bp | GGGACCAAGGCTGAGGATCCTGGGATCTCTTGTCTTCTTCCAGTTGCCATGGTAAACAGGAACAGGGATTaGTTTTATTACCTTAAGACT | + |
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Preference number: 2 (lower is better) Translates to: GTKAEDPGISCLLPVAMVNRNRD*FYYLKT Trigger: AGTCTTAAGGTAATAAAAGCAATCCCTGTTCCTGTT...TACCATGGCAACTGGAAGAAGACAAGAGATCCCAGGATCCTCAGCCTTGGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR CAA 90 bp | CTTATCTTAGTTTTCGAAACACTTCTTCAGATCAGCAACTCGAGGTaGCTTGTCCTGTGGCCTTTGCTGCGTGCTTACATGAGAGACATA | + |
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Preference number: 2 (lower is better) Translates to: LILVFETLLQISNSR*LVLWPLLRAYMRDI Trigger: TATGTCTCTCATGTAAGCACGCAGCAAAGGCCACAGGACAAGCAACCTCGAGTTGCTGATCTGAAGAAGTGTTTCGAAAACTAAGATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCTTGCACCTCTCAACTTTaGTCTGCTTCAATTCTTACC | + |
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Preference number: 2 (lower is better) Translates to: RKRNSALLRVGNPSHSLSCTSQL*SASILT Trigger: GGTAAGAATTGAAGCAGATCAAAGTTGAGAGGTGCA...AGATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR CCA 72 bp | GTTGCCATGGTAACCCCACTGGGATGTCAGGCAGGCTaGAGCAGCTCTCTGACGCCGCCCCTCGCTGACAGC | + |
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Preference number: 3 (lower is better) Translates to: VAMVTPLGCQAG*SSSLTPPLADS Trigger: GCTGTCAGCGAGGGGCGGCGTCAGAGAGCTGCTCCAGCCTGCCTGACATCCCAGTGGGGTTACCATGGCAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR CCA 72 bp | ACGCCGCCCCTCGCTGACAGCAGTCTAAGCTCTGGCTaGCCCTCTGCAGGTCGCCACTCTTGGTTTCCACGT | + |
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Preference number: 3 (lower is better) Translates to: TPPLADSSLSSG*PSAGRHSWFPR Trigger: ACGTGGAAACCAAGAGTGGCGACCTGCAGAGGGCCAGCCAGAGCTTAGACTGCTGTCAGCGAGGGGCGGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR TCA 72 bp | CATCACGGTACCCTCCAAAGAGCAGGGCCTGCACTTTaGGGAAGAGACGGGACACCCCTTCCCCAGGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: HHGTLQRAGPAL*GRDGTPLPQGS Trigger: TGAGCCCTGGGGAAGGGGTGTCCCGTCTCTTCCTCAAAGTGCAGGCCCTGCTCTTTGGAGGGTACCGTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR GCA 72 bp | GTGCTCCCAGCGCATGGGGTAGAGCAGGGCACAGGATaGGTGAACACAGGCTGTCAGAGTGCTGAGCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: VLPAHGVEQGTG*VNTGCQSAELA Trigger: AGCAAGCTCAGCACTCTGACAGCCTGTGTTCACGCATCCTGTGCCCTGCTCTACCCCATGCGCTGGGAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR GCA 72 bp | AGGTCCGGACTCCACACCTTACTTCCCACCTCAGGTTaGCTTCTGCTGGGCAGCCTCCTTCCTCTCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: RSGLHTLLPTSG*LLLGSLLPLCA Trigger: GGCACAGAGAGGAAGGAGGCTGCCCAGCAGAAGGCAACCTGAGGTGGGAAGTAAGGTGTGGAGTCCGGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR GCA 72 bp | CTCCTGCTGGGGCGGAGGGGCCTGTTCTGTCCAAAGTaGTGGCTAATAGGCAGGCGCTGTTGCAGACGATCA | + |
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Preference number: 3 (lower is better) Translates to: LLLGRRGLFCPK*WLIGRRCCRRS Trigger: TGATCGTCTGCAACAGCGCCTGCCTATTAGCCAGCACTTTGGACAGAACAGGCCCCTCCGCCCCAGCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR TCA 72 bp | CCCCAGGGCTCAAGGTGGGGCTCCTGGATTGAGGATTaGCATCCTGGGCTTTGTCTCCGGAGTCTAGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PQGSRWGSWIED*HPGLCLRSLED Trigger: GTCTTCTAGACTCCGGAGACAAAGCCCAGGATGTCAATCCTCAATCCAGGAGCCCCACCTTGAGCCCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR GCA 72 bp | AGCCTCAGCAGGGATACCACATCCGGCGGCAGAGCTTaGACATCGTCAAAGGGTGTCTCCAGGGTGTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: SLSRDTTSGGRA*TSSKGVSRVLE Trigger: CTCTAACACCCTGGAGACACCCTTTGACGATGTGCAAGCTCTGCCGCCGGATGTGGTATCCCTGCTGAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR CCA 72 bp | GTGGCCTTTGCTGCGTGCTTACATGAGAGACATAAGTaGGGGCTCCCAGCTCCTCGAGGGGTTGTACACAAG | + |
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Preference number: 3 (lower is better) Translates to: VAFAACLHERHK*GLPAPRGVVHK Trigger: CTTGTGTACAACCCCTCGAGGAGCTGGGAGCCCCCACTTATGTCTCTCATGTAAGCACGCAGCAAAGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTCAGCTAGCAGCGCTGCGAAGAGCCCCACGATGTTCTCATCTGTCACAGCGAAACAAGAAAGCAGCTaGCTATTCCCCAGGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSASSAAKSPTMFSSVTAKQESS*LFPRAG Trigger: TCCTGCCCTGGGGAATAGCAAGCTGCTTTCTTGTTT...CGCTGTGACAGATGAGAACATCGTGGGGCTCTTCGCAGCGCTGCTAGCTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR CCA 72 bp | CTAAGCTCTGGCTGGCCCTCTGCAGGTCGCCACTCTTaGTTTCCACGTTCAGGCTGTCTAGAATCTCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSSGWPSAGRHS*FPRSGCLESHS Trigger: TGAGTGAGATTCTAGACAGCCTGAACGTGGAAACCAAGAGTGGCGACCTGCAGAGGGCCAGCCAGAGCTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR TCA 72 bp | TGCAGAAGTGACAGGTCACCAGGTAGGGACCAAGGCTaGGGATCCTGGGATCTCTTGTCTTCTTCCAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: CRSDRSPGRDQG*GSWDLLSSSSC Trigger: GCAACTGGAAGAAGACAAGAGATCCCAGGATCCTCAGCCTTGGTCCCTACCTGGTGACCTGTCACTTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR GCA 72 bp | TGGCGGCATCCGGAGCCACAAAACAAGAAAGCAGCTTaGTATTCCCCAGGGCAGGAGGCAAGATTCCACATT | + |
|
Preference number: 3 (lower is better) Translates to: WRHPEPQNKKAA*YSPGQEARFHI Trigger: AATGTGGAATCTTGCCTCCTGCCCTGGGGAATAGCAAGCTGCTTTCTTGTTTTGTGGCTCCGGATGCCGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR CCA 72 bp | CACCAGCTCAGTGAGGTTCCTATTCTCAGGAATAGATaGCAGGCTGGCGGCATCCGGAGCCACAAAACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HQLSEVPILRNR*QAGGIRSHKTR Trigger: TCTTGTTTTGTGGCTCCGGATGCCGCCAGCCTGCCATCTATTCCTGAGAATAGGAACCTCACTGAGCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR GCA 72 bp | TCAGTAGATCCAGCTCTTCTCCAGACCCCAGAAAGCTaGCATCTAGAGTATCTTCTGCCCAGGGGTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVDPALLQTPES*HLEYLLPRGSE Trigger: CTCAGAACCCCTGGGCAGAAGATACTCTAGATGGCAGCTTTCTGGGGTCTGGAGAAGAGCTGGATCTACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGAGACGAAATGGATTGTAATCTTTGGACAGCATCAGAGTTGGGCTCTGTGGTCAGAGTGCTGAGCTaGCTGGCAGTGAGCAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: EGDEMDCNLWTASELGSVVRVLS*LAVSKT Trigger: GGTCTTGCTCACTGCCAGCAAGCTCAGCACTCTGAC...CACAGAGCCCAACTCTGATGCTGTCCAAAGATTACAATCCATTTCGTCTCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR TCA 72 bp | TCCGCGGCAGGCAATGATCTCTTGCTCAAATTGGTCTaGGAAGCCTTCCCCAGCATTGAGTTTTTCCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: SAAGNDLLLKLV*EAFPSIEFFQS Trigger: CGACTGGAAAAACTCAATGCTGGGGAAGGCTTCTCAGACCAATTTGAGCAAGAGATCATTGCCTGCCGCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR CCA 72 bp | GAAGCTCCGCGGCAGGCAATGATCTCTTGCTCAAATTaGTCTGAGAAGCCTTCCCCAGCATTGAGTTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: EAPRQAMISCSN*SEKPSPALSFS Trigger: GGAAAAACTCAATGCTGGGGAAGGCTTCTCAGACCAATTTGAGCAAGAGATCATTGCCTGCCGCGGAGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR TCA 72 bp | GAATCTTGTAGAACACTTCAAACCAGGGAAAGTGGCTaGGGATACAGAGACAACTCCGTGCACCAGCTCGCA | + |
|
Preference number: 3 (lower is better) Translates to: ESCRTLQTRESG*GYRDNSVHQLA Trigger: TGCGAGCTGGTGCACGGAGTTGTCTCTGTATCCTCAGCCACTTTCCCTGGTTTGAAGTGTTCTACAAGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR TCA 72 bp | CCCCTCATCAGTTGTGATCCTTGCACCTCTCAACTTTaGTCTGCTTCAATTCTTACCTCTCCCGCAGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PLISCDPCTSQL*SASILTSPAGV Trigger: AACCCCTGCGGGAGAGGTAAGAATTGAAGCAGATCAAAGTTGAGAGGTGCAAGGATCACAACTGATGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR TCA 72 bp | ACCTGGGGAGGCTGGTTTCTGGGGTTCTCTGCAGAATaGGAGCATGAGGGAGACGAAATGGATTGTAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: TWGGWFLGFSAE*EHEGDEMDCNL Trigger: AAGATTACAATCCATTTCGTCTCCCTCATGCTCTCATTCTGCAGAGAACCCCAGAAACCAGCCTCCCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR CCA 72 bp | TCCACATTCACTCCGGACAGTGATGCTGCTGTCCTGTaGGACGAGAGTAACATCTCTGATCTTCCTGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: STFTPDSDAAVL*DESNISDLPEN Trigger: GTTTTCAGGAAGATCAGAGATGTTACTCTCGTCCCACAGGACAGCAGCATCACTGTCCGGAGTGAATGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR TCA 72 bp | TTAACCAAGCCCCTTCTCGGGGGCTGTGGTAAATGGTaGGGTGATGAAGTTGGTTATAAACAGGAACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LTKPLLGGCGKW*GDEVGYKQEQG Trigger: TCCCTGTTCCTGTTTATAACCAACTTCATCACCTCACCATTTACCACAGCCCCCGAGAAGGGGCTTGGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR TCA 72 bp | CCTAATGGGCTGGAAGTTGGGGTAAGAGCCTTCAGATaGACCTTAAAGATGCTTAGAGGTCACTTGGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PNGLEVGVRAFR*TLKMLRGHLEW Trigger: CCACTCCAAGTGACCTCTAAGCATCTTTAAGGTTCATCTGAAGGCTCTTACCCCAACTTCCAGCCCATTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR GCA 72 bp | CACATCGTCAAAGGGTGTCTCCAGGGTGTTAGAGTCTaGATTCAACACCACAACATCTTCCAGCGCTTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HIVKGCLQGVRV*IQHHNIFQRFF Trigger: GAAAAAGCGCTGGAAGATGTTGTGGTGTTGAATGCAGACTCTAACACCCTGGAGACACCCTTTGACGATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR CCA 72 bp | CTCTTTGCCGATCGGTACATGTTCCTGACAGCTGGTTaGGTTTTTGTCTTCATTGAATGCAGAAGGGCATCG | + |
|
Preference number: 3 (lower is better) Translates to: LFADRYMFLTAG*VFVFIECRRAS Trigger: CGATGCCCTTCTGCATTCAATGAAGACAAAAACCCAACCAGCTGTCAGGAACATGTACCGATCGGCAAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCGTGAGCAGGTTCTGCATACCCTTCAAGCCACTCTTTGCCGATCGGTACATCAGCTGGTTGGGTTTTaGTCTTCATTGAATGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NREQVLHTLQATLCRSVHQLVGF*SSLNAE Trigger: TTCTGCATTCAATGAAGACAAAAACCCAACCAGCTG...ATGTACCGATCGGCAAAGAGTGGCTTGAAGGGTATGCAGAACCTGCTCACGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR TCA 72 bp | CGACTTGGTTCTGGGCTAGAAGGTCCCCCACGTTATTaGGAATCTTGTAGAACACTTCAAACCAGGGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RLGSGLEGPPRY*ESCRTLQTRES Trigger: ACTTTCCCTGGTTTGAAGTGTTCTACAAGATTCTCAATAACGTGGGGGACCTTCTAGCCCAGAACCAAGTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR TCA 72 bp | TGTCTCCGGAGTCTAGAAGACACCCCTCATCAGTTGTaGTCCTTGCACCTCTCAACTTTGATCTGCTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CLRSLEDTPHQL*SLHLSTLICFN Trigger: ATTGAAGCAGATCAAAGTTGAGAGGTGCAAGGATCACAACTGATGAGGGGTGTCTTCTAGACTCCGGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR GCA 72 bp | TTCCTGACAGCTGGTTGGGTTTTTGTCTTCATTGAATaGAGAAGGGCATCGCTACCTTTCTGTAAGGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FLTAGWVFVFIE*RRASLPFCKGL Trigger: CAACCCCTTACAGAAAGGTAGCGATGCCCTTCTGCATTCAATGAAGACAAAAACCCAACCAGCTGTCAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR GCA 72 bp | GAGGTGATGAAGTTGGTTATAAACAGGAACAGGGATTaGTTTTATTACCTTAAGACTATCTACCCAGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EVMKLVINRNRD*FYYLKTIYPEL Trigger: CAGCTCTGGGTAGATAGTCTTAAGGTAATAAAAGCAATCCCTGTTCCTGTTTATAACCAACTTCATCACCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR CAA 72 bp | CAGGTCCGGACTCCACACCTTACTTCCCACCTCAGGTaGCCTTCTGCTGGGCAGCCTCCTTCCTCTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QVRTPHLTSHLR*PSAGQPPSSLC Trigger: GCACAGAGAGGAAGGAGGCTGCCCAGCAGAAGGCAACCTGAGGTGGGAAGTAAGGTGTGGAGTCCGGACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR CAA 72 bp | CTGAGTGTCCCCAGGGCTCAAGGTGGGGCTCCTGGATaGAGGATTGACATCCTGGGCTTTGTCTCCGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSVPRAQGGAPG*RIDILGFVSGV Trigger: GACTCCGGAGACAAAGCCCAGGATGTCAATCCTCAATCCAGGAGCCCCACCTTGAGCCCTGGGGACACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| CDS-3UTR CCA 90 bp | GCGAAGAGCCCCACGATGTTCTCATCTGTCACAGCGACCACCAGCTCAGTGAGGCTGCTCCTGGAAGTCTaGAGGGAACTGCCGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AKSPTMFSSVTATTSSVRLLLEV*RELPQD Trigger: ATCCTGCGGCAGTTCCCTCCAGACTTCCAGGAGCAG...CCTCACTGAGCTGGTGGTCGCTGTGACAGATGAGAACATCGTGGGGCTCTTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGCTAGCAGCGCTGCGAAGAGCCCCACGATGTTCTCATCTGTCACAGCGATGGCTTCCTGCTCCTaGAAGTCTGGAGGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSASSAAKSPTMFSSVTAMASCS*KSGGNC Trigger: GCAGTTCCCTCCAGACTTCCAGGAGCAGGAAGCCAT...CGCTGTGACAGATGAGAACATCGTGGGGCTCTTCGCAGCGCTGCTAGCTGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR CAA 72 bp | AAGCCTCAGCAGGGATACCACATCCGGCGGCAGAGCTaGCACATCGTCAAAGGGTGTCTCCAGGGTGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPQQGYHIRRQS*HIVKGCLQGVR Trigger: TCTAACACCCTGGAGACACCCTTTGACGATGTGCAAGCTCTGCCGCCGGATGTGGTATCCCTGCTGAGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR CAA 72 bp | CTGGCGGCATCCGGAGCCACAAAACAAGAAAGCAGCTaGCTATTCCCCAGGGCAGGAGGCAAGATTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LAASGATKQESS*LFPRAGGKIPH Trigger: ATGTGGAATCTTGCCTCCTGCCCTGGGGAATAGCAAGCTGCTTTCTTGTTTTGTGGCTCCGGATGCCGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGCGTGCTTACATGAGAGACATAAGTGGGGGCTCCCAGCTCCTCGAGGGAGAACCAGTCAAACATaGCAGGGGGATGCCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FAACLHERHKWGLPAPRGRTSQT*QGDALS Trigger: AGACAAGGCATCCCCCTGCCATGTTTGACTGGTTCT...CCCTCGAGGAGCTGGGAGCCCCCACTTATGTCTCTCATGTAAGCACGCAGCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| CDS-3UTR CCA 90 bp | CCCCACGATGTTCTCATCTGTCACAGCGACCACCAGCTCAGTGAGGTTCCTATTCCTCTTCCAGGGAGTTaGGGCAGCCAGCTTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHDVLICHSDHQLSEVPIPLPGS*GSQLQR Trigger: TCTTTGAAGCTGGCTGCCCCAACTCCCTGGAAGAGG...AATAGGAACCTCACTGAGCTGGTGGTCGCTGTGACAGATGAGAACATCGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| 3UTR CAA 72 bp | CAGATCAGCAACTCGAGGTTGCTTGTCCTGTGGCCTTaGCTGCGTGCTTACATGAGAGACATAAGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QISNSRLLVLWP*LRAYMRDISGG Trigger: GCCCCCACTTATGTCTCTCATGTAAGCACGCAGCAAAGGCCACAGGACAAGCAACCTCGAGTTGCTGATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTACCCCAGGGCTCAAGGTaGGGCTCCTCTCCCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLPQGSR*GSSPAG Trigger: CCCTGCGGGAGAGGAGCCCCACCTTGAGCCCTGGGG...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCCGTGCTCCCAGCGCATaGGGTAGAGCAGGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIRAPSA*GRAGHR Trigger: CCTGTGCCCTGCTCTACCCCATGCGCTGGGAGCACG...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATGGCCCAGGAGGACCTaGGGAGGCTGGTTTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLWPRRT*GGWFLG Trigger: CCCCAGAAACCAGCCTCCCCAGGTCCTCCTGGGCCA...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCGCAGGGCCTGCACTTTaGGGAAGAGACGGGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIAGPAL*GRDGTP Trigger: GGGTGTCCCGTCTCTTCCTCAAAGTGCAGGCCCTGC...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR GCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGAATGCCTGCAGGGGTaGCCCGGGCTTCTGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLECLQG*PGLLSQ Trigger: TTGGCTCAGAAGCCCGGGGCACCCCTGCAGGCATTC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGGAACTGCCGCAGGATaGGGGGATCCTCTTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLGTAAG*GDPLPG Trigger: CCCTGGAAGAGGATCCCCCCATCCTGCGGCAGTTCC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011623.9 ENSMUST00000233564.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGGATGTCAGGCAGGCTaGAGCAGCTCTCTGACGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLGCQAG*SSSLTP Trigger: CGGCGTCAGAGAGCTGCTCCAGCCTGCCTGACATCC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCCTGAAGGTCACTGGCTaGCCCGGGATGCAGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLILKVTG*PGMQTR Trigger: CCTTGTCTGCATCCCGGGTCAGCCAGTGACCTTCAG...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCGTCCCTCTTCAGTCTTaGGTCTCCTGCTGGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIVPLQS*VSCWGG Trigger: TCCGCCCCAGCAGGAGACTCAAGACTGAAGAGGGAC...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCCAGCAGTCTAAGCTCTaGCTGGCCCTCTGCAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIQQSKL*LALCRS Trigger: CGACCTGCAGAGGGCCAGCCAGAGCTTAGACTGCTG...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGGTTGTACACAAGCCTaGCCCAGGAGGACCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLGCTQA*PRRTWG Trigger: TCCCCAGGTCCTCCTGGGCCAGGCTTGTGTACAACC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| 3UTR CAA 72 bp | GTTTTCGAAACACTTCTTCAGATCAGCAACTCGAGGTaGCTTGTCCTGTGGCCTTTGCTGCGTGCTTACATG | + |
|
Preference number: 4 (lower is better) Translates to: VFETLLQISNSR*LVLWPLLRAYM Trigger: CATGTAAGCACGCAGCAAAGGCCACAGGACAAGCAACCTCGAGTTGCTGATCTGAAGAAGTGTTTCGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGCAAAGGTGAAATGCTaGACAGCAGGGCTGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLAKVKC*TAGLGG Trigger: GCCACCCAGCCCTGCTGTTCAGCATTTCACCTTTGC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTACTGCTCCTGGAAGTCTaGAGGGAACTGCCGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLLLLEV*RELPQD Trigger: ATCCTGCGGCAGTTCCCTCCAGACTTCCAGGAGCAG...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011623.9 ENSMUST00000233564.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCCTCACTGAAGGTCACTaGCTGACCCGGGATGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLILTEGH*LTRDAD Trigger: GTCTGCATCCCGGGTCAGCCAGTGACCTTCAGTGAG...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCAAGCTGGGGGCTTTCTaGAGGACTGTGCCTAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIKLGAF*RTVPSG Trigger: CCCACTAGGCACAGTCCTCCAGAAAGCCCCCAGCTT...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAAGGACCTGGGGAGGCTaGTTTCTGGGGTTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLRTWGG*FLGFSA Trigger: TGCAGAGAACCCCAGAAACCAGCCTCCCCAGGTCCT...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR GCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATTCTCGGACTCTCTCTaGGAGACTGCCATGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLFSDSL*ETAMDS Trigger: GGAGTCCATGGCAGTCTCGCAGAGAGAGTCCGAGAA...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR GCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTACTTTCTGGAGGACTGTaGCTAGTGGGGACTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLLSGGL*LVGTLR Trigger: CCTCAGAGTCCCCACTAGGCACAGTCCTCCAGAAAG...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCCCTCTTCCAGGGAGTTaGGGCAGCCAGCTTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIPLPGS*GSQLQR Trigger: TCTTTGAAGCTGGCTGCCCCAACTCCCTGGAAGAGG...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011623.9 ENSMUST00000233564.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAATGGCTTCCTGCTCCTaGAAGTCTGGAGGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLMASCS*KSGGNC Trigger: GCAGTTCCCTCCAGACTTCCAGGAGCAGGAAGCCAT...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011623.9 ENSMUST00000233564.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATGGGCACCATCTGCATaGCTTCCTGCTCCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLWAPSA*LPAPGS Trigger: ACTTCCAGGAGCAGGAAGCCATGCAGATGGTGCCCA...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011623.9 ENSMUST00000233564.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATGTACCGCCTTTTTGTaGAATGCCTGCAGGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLCTAFL*NACRGA Trigger: GGCACCCCTGCAGGCATTCCACAAAAAGGCGGTACA...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCGTGGAGACAAGAAGCTaGGGGCTTTCTGGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIVETRS*GLSGGL Trigger: CAGTCCTCCAGAAAGCCCCCAGCTTCTTGTCTCCAC...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGGGGAGGCTGGTTTCTaGGGTTCTCTGCAGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLGEAGF*GSLQNE Trigger: CTCATTCTGCAGAGAACCCCAGAAACCAGCCTCCCC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTACATGAGAGACATAAGTaGGGGCTCCCAGCTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLHERHK*GLPAPR Trigger: TCGAGGAGCTGGGAGCCCCCACTTATGTCTCTCATG...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| 3UTR CAA 72 bp | TCTTGCTCAAATTGGTCTGAGAAGCCTTCCCCAGCATaGAGTTTTTCCAGTCGGGATTCGATGAACTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCSNWSEKPSPA*SFSSRDSMNCL Trigger: CAAGCAGTTCATCGAATCCCGACTGGAAAAACTCAATGCTGGGGAAGGCTTCTCAGACCAATTTGAGCAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCCGACCACCAGCTCAGTaGGGTTCCTATTCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIRPPAQ*GSYSQE Trigger: TTCCTGAGAATAGGAACCTCACTGAGCTGGTGGTCG...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAAAAAAGCTTCCTCACTaGAGGTCACTGGCTGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLKKLPH*RSLADP Trigger: CGGGTCAGCCAGTGACCTTCAGTGAGGAAGCTTTTT...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGGGTTCTCTGCAGAATaGGAGCATGAGGGAGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLGFSAE*EHEGDE Trigger: TTCGTCTCCCTCATGCTCTCATTCTGCAGAGAACCC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR GCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCAGCAACTCGAGGTTaGTTGTCCTGTGGCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLSATRG*LSCGLC Trigger: GCAAAGGCCACAGGACAAGCAACCTCGAGTTGCTGA...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCAACAGCAGGGCTGGGTaGCTCCCTTTCTATGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLINSRAG*LPFYVE Trigger: TTCGACATAGAAAGGGAGCCACCCAGCCCTGCTGTT...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCAGCCTTCCCCAGCATTaGGTTTTTCCAGTCGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLISLPQH*VFPVGI Trigger: AATCCCGACTGGAAAAACTCAATGCTGGGGAAGGCT...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCTTGTCTTCTTCCAGTTaGCATGGTAACCCCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLILSSSS*HGNPTG Trigger: CCCAGTGGGGTTACCATGGCAACTGGAAGAAGACAA...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAAGAACCAGTCAAACATaGCAGGGGGATGCCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLRTSQT*QGDALS Trigger: AGACAAGGCATCCCCCTGCCATGTTTGACTGGTTCT...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011623.9 ENSMUST00000233564.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATTCTGTCCAAAGTGCTaGCTAATAGGCAGGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLFCPKC*LIGRRC Trigger: ACAGCGCCTGCCTATTAGCCAGCACTTTGGACAGAA...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGGGGCTCTGCTGAAATaGCTGAGAACAGGAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLGALLK*LRTGVL Trigger: AAGAACTCCTGTTCTCAGCCATTTCAGCAGAGCCCC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGGACAGCATCAGAGTTaGGCTCTGTGGAGACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLGQHQS*ALWRQE Trigger: TTCTTGTCTCCACAGAGCCCAACTCTGATGCTGTCC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCTTGCTCAAATTGGTCTaGGAAGCCTTCCCCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLILLKLV*EAFPSI Trigger: AATGCTGGGGAAGGCTTCTCAGACCAATTTGAGCAA...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCATCGGTACATGTTCCTaGCAGCTGGTTGGGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIIGTCS*QLVGFL Trigger: CAAAAACCCAACCAGCTGTCAGGAACATGTACCGAT...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGCCACTCTTTGCCTTTaGTGCACAATATTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLATLCL*CTIFLE Trigger: CTCCAGGAATATTGTGCATCAAAGGCAAAGAGTGGC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGTAGCTTACAACCTCTaGAAATGGGGTGTCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLVAYNL*KWGVLQ Trigger: CTGCAAGACACCCCATTTTCAGAGGTTGTAAGCTAC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCCGGGATTCGATGAACTaGTTGAACAGCTGCAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIRDSMN*LNSCKC Trigger: ACACTTGCAGCTGTTCAAGCAGTTCATCGAATCCCG...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCCAGACCCCAGAAAGCTaGCATCTAGAGTATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIQTPES*HLEYLL Trigger: CAGAAGATACTCTAGATGGCAGCTTTCTGGGGTCTG...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGGTCCCCCACGTTATTaGGAATCTTGTAGAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLGPPRY*ESCRTL Trigger: AAGTGTTCTACAAGATTCTCAATAACGTGGGGGACC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCGGTTTTTGTCTTCATTaGATGCAGAAGGGCATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIGFCLH*MQKGIA Trigger: AGCGATGCCCTTCTGCATTCAATGAAGACAAAAACC...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCCAGGGTGTTAGAGTCTaGATTCAACACCACAACATC | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIQGVRV*IQHHNI Trigger: GATGTTGTGGTGTTGAATGCAGACTCTAACACCCTG...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCTTTGTCTTCATTGAATaGAGAAGGGCATCGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIFVFIE*RRASLP Trigger: AGGTAGCGATGCCCTTCTGCATTCAATGAAGACAAA...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTACATGTTCCTGACAGCTaGTTGGGTTTTTGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLHVPDS*LGFCLH Trigger: ATGAAGACAAAAACCCAACCAGCTGTCAGGAACATG...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCATGGATTGTAATCTTTaGACAGCATCAGAGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIMDCNL*TASELG Trigger: GCCCAACTCTGATGCTGTCCAAAGATTACAATCCAT...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCTTCCTGACAGCTGGTTaGGTTTTTGTCTTCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KEKKFSFIESWEPLTLLIFLTAG*VFVFIE Trigger: TTCAATGAAGACAAAAACCCAACCAGCTGTCAGGAA...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAATGAGGGAGACGAAATaGATTGTAATCTTTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRNSALLRVGNPSHSLMRETK*IVIFGQ Trigger: CTGTCCAAAGATTACAATCCATTTCGTCTCCCTCAT...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CAA 90 bp | CTCTCAGCTAGCAGCGCTGCGAAGAGCCCCACGATGTTCTCATCTGTCACAGCGTCCTCTTCCAGGGAGTaGGGGCAGCCAGCTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSASSAAKSPTMFSSVTASSSRE*GQPASK Trigger: CTTTGAAGCTGGCTGCCCCAACTCCCTGGAAGAGGA...CGCTGTGACAGATGAGAACATCGTGGGGCTCTTCGCAGCGCTGCTAGCTGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233564.2 |
||
| CDS CCA 90 bp | CAGGTCAGTGAGGGCAAAGGTGAAATGCTGAACAGCAGGGCTGGGTaGCTCCCTTTCTATGTCGAAGGGGAAACAGAACCTGGGCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: QVSEGKGEMLNSRAG*LPFYVEGETEPGHH Trigger: ATGGTGCCCAGGTTCTGTTTCCCCTTCGACATAGAAAGGGAGCCACCCAGCCCTGCTGTTCAGCATTTCACCTTTGCCCTCACTGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS GCA 90 bp | CCCCTCTGCAGGCCAGAGTCTCCATCCTTAATCGTGAGCAGGTTCTaGATACCCTTCAAGCCACTCTTTGCCTTTGATGCACAATATTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLCRPESPSLIVSRF*IPFKPLFAFDAQYS Trigger: GGAATATTGTGCATCAAAGGCAAAGAGTGGCTTGAAGGGTATGCAGAACCTGCTCACGATTAAGGATGGAGACTCTGGCCTGCAGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS CCA 90 bp | TCCTGGAGGGAGTCACCCGATCGGTACATGTTCCTGACAGCTGGTTaGGTTTTTGTCTTCATTGAATGCAGAAGGGCATCGCTACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SWRESPDRYMFLTAG*VFVFIECRRASLPF Trigger: GAAAGGTAGCGATGCCCTTCTGCATTCAATGAAGACAAAAACCCAACCAGCTGTCAGGAACATGTACCGATCGGGTGACTCCCTCCAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS CCA 90 bp | TGCATACCCTTCAAGCCACTCTTTGCCTTTGATGCACAATATTCCTaGAGGGAGTCACCCGATCGGTACATGTTCCTGACAGCTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CIPFKPLFAFDAQYS*RESPDRYMFLTAGW Trigger: CCAACCAGCTGTCAGGAACATGTACCGATCGGGTGACTCCCTCCAGGAATATTGTGCATCAAAGGCAAAGAGTGGCTTGAAGGGTATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CAA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGGTCTAGGATCCAGCTaGCTGAGAGAGGGCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRKRNSALLRVGNPSHSLGLGSS*LREGPG Trigger: CCCCGGGCCCTCTCTCAGCAAGCTGGATCCTAGACC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS TCA 90 bp | AATCGTGAGCAGGTTCTGCATACCCTTCAAGCCACTCTTTGCCTTTaGTGCACAATATTCCTGGAGGGAGTCACCCGATCGGTACATGTT | + |
|
Preference number: 5 (lower is better) Translates to: NREQVLHTLQATLCL*CTIFLEGVTRSVHV Trigger: AACATGTACCGATCGGGTGACTCCCTCCAGGAATATTGTGCATCAAAGGCAAAGAGTGGCTTGAAGGGTATGCAGAACCTGCTCACGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS TCA 90 bp | ATGCACAATATTCCTGGAGGGAGTCACCCGATCGGTACATGTTCCTaGCAGCTGGTTGGGTTTTTGTCTTCATTGAATGCAGAAGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: MHNIPGGSHPIGTCS*QLVGFLSSLNAEGH Trigger: ATGCCCTTCTGCATTCAATGAAGACAAAAACCCAACCAGCTGTCAGGAACATGTACCGATCGGGTGACTCCCTCCAGGAATATTGTGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CAA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCCTCTTCCAGGGAGTaGGGGCAGCCAGCTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRKRNSALLRVGNPSHSLSSSRE*GQPASK Trigger: CTTTGAAGCTGGCTGCCCCAACTCCCTGGAAGAGGA...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000011623.9 ENSMUST00000233564.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGTCAGAGTGCTGAGCTaGCTGGCAGTGAGCAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: SRKRNSALLRVGNPSHSLVRVLS*LAVSKT Trigger: GGTCTTGCTCACTGCCAGCAAGCTCAGCACTCTGAC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
||
| CDS-3UTR CAA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCGCAACTCGAGGTTGCTaGTCCTGTGGCCTTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KEKKFSFIESWEPLTLLIATRGC*SCGLCC Trigger: GCAGCAAAGGCCACAGGACAAGCAACCTCGAGTTGC...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS GCA 90 bp | CGGTACATGTTCCTGACAGCTGGTTGGGTTTTTGTCTTCATTGAATaGAGAAGGGCATCGCTACCTTTCTTAAGACTATCTACCCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: RYMFLTAGWVFVFIE*RRASLPFLRLSTQS Trigger: GCTCTGGGTAGATAGTCTTAAGAAAGGTAGCGATGCCCTTCTGCATTCAATGAAGACAAAAACCCAACCAGCTGTCAGGAACATGTACCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS TCA 90 bp | CGATCGGTACATGTTCCTGACAGCTGGTTGGGTTTTTGTCTTCATTaGATGCAGAAGGGCATCGCTACCTTTCTTAAGACTATCTACCCA | + |
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Preference number: 5 (lower is better) Translates to: RSVHVPDSWLGFCLH*MQKGIATFLKTIYP Trigger: TGGGTAGATAGTCTTAAGAAAGGTAGCGATGCCCTTCTGCATTCAATGAAGACAAAAACCCAACCAGCTGTCAGGAACATGTACCGATCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS-3UTR CAA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATGGACAGCATCAGAGTaGGGCTCTGTGGAGACAAGA | + |
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Preference number: 5 (lower is better) Translates to: SRKRNSALLRVGNPSHSLWTASE*GSVETR Trigger: TCTTGTCTCCACAGAGCCCAACTCTGATGCTGTCCA...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS-3UTR CAA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCAAACAAGAAAGCAGCTaGCTATTCCCCAGGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: KEKKFSFIESWEPLTLLIKQESS*LFPRAG Trigger: TCCTGCCCTGGGGAATAGCAAGCTGCTTTCTTGTTT...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS-3UTR CAA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCAAGCCTTCCCCAGCATaGAGTTTTTCCAGTCGGGAT | + |
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Preference number: 5 (lower is better) Translates to: KEKKFSFIESWEPLTLLIKPSPA*SFSSRD Trigger: ATCCCGACTGGAAAAACTCAATGCTGGGGAAGGCTT...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS-3UTR CAA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCGATTCGATGAACTGCTaGAACAGCTGCAAGTGTACC | + |
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Preference number: 5 (lower is better) Translates to: KEKKFSFIESWEPLTLLIDSMNC*NSCKCT Trigger: GGTACACTTGCAGCTGTTCAAGCAGTTCATCGAATC...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS-3UTR CAA 90 bp | TCAAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTAGGGTTTTTGTCTTCATaGAATGCAGAAGGGCATCGC | + |
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Preference number: 5 (lower is better) Translates to: SRKRNSALLRVGNPSHSLGFLSS*NAEGHR Trigger: GCGATGCCCTTCTGCATTCAATGAAGACAAAAACCC...TAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS-3UTR CAA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCCAGCTGGTTGGGTTTTaGTCTTCATTGAATGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: KEKKFSFIESWEPLTLLIQLVGF*SSLNAE Trigger: TTCTGCATTCAATGAAGACAAAAACCCAACCAGCTG...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS-3UTR CAA 90 bp | AAGGAAAAGAAATTCAGCTTTATTGAGAGTTGGGAACCCCTCACACTCCTTATCCCTTCAAGCCACTCTTaGCCTTTGATGCACAATATT | + |
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Preference number: 5 (lower is better) Translates to: KEKKFSFIESWEPLTLLIPSSHS*PLMHNI Trigger: AATATTGTGCATCAAAGGCAAAGAGTGGCTTGAAGG...GATAAGGAGTGTGAGGGGTTCCCAACTCTCAATAAAGCTGAATTTCTTTTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS CCA 72 bp | CCTGCTCCTGGAAGTCTGGAGGGAACTGCCGCAGGATaGGGGGATCCTCTTCCAGGGAGTTGGGGCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PAPGSLEGTAAG*GDPLPGSWGSQ Trigger: CTGGCTGCCCCAACTCCCTGGAAGAGGATCCCCCCATCCTGCGGCAGTTCCCTCCAGACTTCCAGGAGCAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011623.9 ENSMUST00000233564.2 |
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| CDS CCA 72 bp | GAGGGCAAAGGTGAAATGCTGAACAGCAGGGCTGGGTaGCTCCCTTTCTATGTCGAAGGGGAAACAGAACCT | + |
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Preference number: 6 (lower is better) Translates to: EGKGEMLNSRAG*LPFYVEGETEP Trigger: AGGTTCTGTTTCCCCTTCGACATAGAAAGGGAGCCACCCAGCCCTGCTGTTCAGCATTTCACCTTTGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS TCA 72 bp | CAGGTTCTGCATACCCTTCAAGCCACTCTTTGCCTTTaGTGCACAATATTCCTGGAGGGAGTCACCCGATCG | + |
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Preference number: 6 (lower is better) Translates to: QVLHTLQATLCL*CTIFLEGVTRS Trigger: CGATCGGGTGACTCCCTCCAGGAATATTGTGCATCAAAGGCAAAGAGTGGCTTGAAGGGTATGCAGAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS GCA 72 bp | AGGCCAGAGTCTCCATCCTTAATCGTGAGCAGGTTCTaGATACCCTTCAAGCCACTCTTTGCCTTTGATGCA | + |
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Preference number: 6 (lower is better) Translates to: RPESPSLIVSRF*IPFKPLFAFDA Trigger: TGCATCAAAGGCAAAGAGTGGCTTGAAGGGTATGCAGAACCTGCTCACGATTAAGGATGGAGACTCTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS CCA 72 bp | GAGTCACCCGATCGGTACATGTTCCTGACAGCTGGTTaGGTTTTTGTCTTCATTGAATGCAGAAGGGCATCG | + |
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Preference number: 6 (lower is better) Translates to: ESPDRYMFLTAG*VFVFIECRRAS Trigger: CGATGCCCTTCTGCATTCAATGAAGACAAAAACCCAACCAGCTGTCAGGAACATGTACCGATCGGGTGACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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| CDS GCA 72 bp | TTCCTGACAGCTGGTTGGGTTTTTGTCTTCATTGAATaGAGAAGGGCATCGCTACCTTTCTTAAGACTATCT | + |
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Preference number: 6 (lower is better) Translates to: FLTAGWVFVFIE*RRASLPFLRLS Trigger: AGATAGTCTTAAGAAAGGTAGCGATGCCCTTCTGCATTCAATGAAGACAAAAACCCAACCAGCTGTCAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011623.9 |
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