RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DENND1B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056268

Ensembl transcript IDs: ENSMUST00000094505.6, ENSMUST00000168527.8, ENSMUST00000198759.5, ENSMUST00000200429.5, ENSMUST00000200533.5

Found 469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCACCAGAGGAAACGCGTTTCCTTGGGGATGGAGGGAGTTGCCTaGCATGGAGGGCGCTGTCGTCCTGCCCGAGATTCCACTCTCCCT +
Preference number: 1 (lower is better)
Translates to: AHQRKRVSLGMEGVA*HGGRCRPARDSTLP
Trigger: AGGGAGAGTGGAATCTCGGGCAGGACGACAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCTCTGGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp CAGAGACTCTGTCAGCCCACCAGAGGAAACGCGTTTCCTTGGGGATaGAGGGAGTTGCCTGCCATGGAGGGCGCTGTCGTCCTGCCCGAG +
Preference number: 1 (lower is better)
Translates to: QRLCQPTRGNAFPWG*RELPAMEGAVVLPE
Trigger: CTCGGGCAGGACGACAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCTCTGGTGGGCTGACAGAGTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 90 bp GTCAGCCCACCAGAGGAAACGCGTTTCCTTGGGGATGGAGGGAGTTaGCTGCCATGGAGGGCGCTGTCGTCCTGCCCGAGATTCCACTCT +
Preference number: 1 (lower is better)
Translates to: VSPPEETRFLGDGGS*LPWRALSSCPRFHS
Trigger: AGAGTGGAATCTCGGGCAGGACGACAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCTCTGGTGGGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp CCAGAGGAAACGCGTTTCCTTGGGGATGGAGGGAGTTGCCTGCCATaGAGGGCGCTGTCGTCCTGCCCGAGATTCCACTCTCCCTGGTCT +
Preference number: 1 (lower is better)
Translates to: PEETRFLGDGGSCLP*RALSSCPRFHSPWS
Trigger: AGACCAGGGAGAGTGGAATCTCGGGCAGGACGACAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp CTGCCATGGAGGGCGCTGTCGTCCTGCCCGAGATTCCACTCTCCCTaGTCTCCAGAAGCACACAGCAGGGCCAGGTTATTCTCACTGGGA +
Preference number: 1 (lower is better)
Translates to: LPWRALSSCPRFHSP*SPEAHSRARLFSLG
Trigger: TCCCAGTGAGAATAACCTGGCCCTGCTGTGTGCTTCTGGAGACCAGGGAGAGTGGAATCTCGGGCAGGACGACAGCGCCCTCCATGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 90 bp AAAAGTCGACTGGCGGCTCCCGGGGCCGGGCACCGACAGATCCTCTaGCTGAAGTGGAGCCTGACCTGGTGTTTGCTTCACTTCTGCTCT +
Preference number: 1 (lower is better)
Translates to: KSRLAAPGAGHRQIL*LKWSLTWCLLHFCS
Trigger: AGAGCAGAAGTGAAGCAAACACCAGGTCAGGCTCCACTTCAGTCAGAGGATCTGTCGGTGCCCGGCCCCGGGAGCCGCCAGTCGACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 90 bp CCAGGCTCTTGGCAGGCGCCAGCTTTCCTTGATCAGAGCTGTGCGTaGTCAGCGTGTCCAGGATCTCACCCAGTAAGTCCATCTCCCCTG +
Preference number: 1 (lower is better)
Translates to: PGSWQAPAFLDQSCA*SACPGSHPVSPSPL
Trigger: CAGGGGAGATGGACTTACTGGGTGAGATCCTGGACACGCTGAGCACGCACAGCTCTGATCAAGGAAAGCTGGCGCCTGCCAAGAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp GATAAACAGAGACTCTGTCAGCCCACCAGAGGAAACGCGTTTCCTTaGGGATGGAGGGAGTTGCCTGCCATGGAGGGCGCTGTCGTCCTG +
Preference number: 1 (lower is better)
Translates to: DKQRLCQPTRGNAFP*GWRELPAMEGAVVL
Trigger: CAGGACGACAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCTCTGGTGGGCTGACAGAGTCTCTGTTTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 90 bp CTTCTTGGAGAAGTCCGACATCCTTTGAAGGCTTCGTGTCCTCTTTaGCAGCCTTCTCCCAGGGAACAAAAGTCGACTGGCGGCTCCCGG +
Preference number: 1 (lower is better)
Translates to: LLGEVRHPLKASCPL*QPSPREQKSTGGSR
Trigger: CCGGGAGCCGCCAGTCGACTTTTGTTCCCTGGGAGAAGGCTGGCAAAGAGGACACGAAGCCTTCAAAGGATGTCGGACTTCTCCAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 90 bp CGATCGCTCCTATACATTGGGAGCCCAAAGGGGAACATGCTCCTTTaGACACTCTCACCTCTGCTCTACGTGGACCCTCACAGCTCGCAG +
Preference number: 1 (lower is better)
Translates to: RSLLYIGSPKGNMLL*TLSPLLYVDPHSSQ
Trigger: CTGCGAGCTGTGAGGGTCCACGTAGAGCAGAGGTGAGAGTGTGCAAAGGAGCATGTTCCCCTTTGGGCTCCCAATGTATAGGAGCGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp TCTGCTCTTCCTCTCTCTGTTTGGGAAGCTTCAGGAGCAGCAGGCTaGGAACGCAGTCCTGAAGTCGGAGCTGGCTTTCCCACCACAGTA +
Preference number: 1 (lower is better)
Translates to: SALPLSVWEASGAAG*ERSPEVGAGFPTTV
Trigger: TACTGTGGTGGGAAAGCCAGCTCCGACTTCAGGACTGCGTTCCCAGCCTGCTGCTCCTGAAGCTTCCCAAACAGAGAGAGGAAGAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp GTGGACCCTCACAGCTCGCAGACGAGAAATTCACCTTTTGGGTCCTaGAGCTCTGCCCACTGTGGCCTGAGGACCTTTAAAGCCGGTAAG +
Preference number: 1 (lower is better)
Translates to: VDPHSSQTRNSPFGS*SSAHCGLRTFKAGK
Trigger: CTTACCGGCTTTAAAGGTCCTCAGGCCACAGTGGGCAGAGCTCCAGGACCCAAAAGGTGAATTTCTCGTCTGCGAGCTGTGAGGGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 90 bp TGCGCCTCTCATGCAGCATGCTGGCGTACAGTCGCAGCATGTTGTTaGCATCCACGGCAACAAAGTACTCGGTCAGGTTTCTACTCTCCG +
Preference number: 1 (lower is better)
Translates to: CASHAACWRTVAACC*HPRQQSTRSGFYSP
Trigger: CGGAGAGTAGAAACCTGACCGAGTACTTTGTTGCCGTGGATGTCAACAACATGCTGCGACTGTACGCCAGCATGCTGCATGAGAGGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR CCA 90 bp AGAGAACCTCTGCCAAGTGGAGATGCATGGGAGGAAATGAGTGGCTaGGGCTGCATCCTTGGGGGTATATCCAGGTTTGTCCTCTTCCGT +
Preference number: 1 (lower is better)
Translates to: REPLPSGDAWEEMSG*GCILGGISRFVLFR
Trigger: ACGGAAGAGGACAAACCTGGATATACCCCCAAGGATGCAGCCCCAGCCACTCATTTCCTCCCATGCATCTCCACTTGGCAGAGGTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 90 bp CGAGAAATTCACCTTTTGGGTCCTGGAGCTCTGCCCACTGTGGCCTaGGGACCTTTAAAGCCGGTAAGAGTCTCCGTGATTGCTAACCTG +
Preference number: 1 (lower is better)
Translates to: REIHLLGPGALPTVA*GPLKPVRVSVIANL
Trigger: CAGGTTAGCAATCACGGAGACTCTTACCGGCTTTAAAGGTCCTCAGGCCACAGTGGGCAGAGCTCCAGGACCCAAAAGGTGAATTTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 90 bp CCTCTGCCAAGTGGAGATGCATGGGAGGAAATGAGTGGCTGGGGCTaGATCCTTGGGGGTATATCCAGGTTTGTCCTCTTCCGTTTACTA +
Preference number: 1 (lower is better)
Translates to: PLPSGDAWEEMSGWG*ILGGISRFVLFRLL
Trigger: TAGTAAACGGAAGAGGACAAACCTGGATATACCCCCAAGGATGCAGCCCCAGCCACTCATTTCCTCCCATGCATCTCCACTTGGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp GAACAGAGAACCTCTGCCAAGTGGAGATGCATGGGAGGAAATGAGTaGCTGGGGCTGCATCCTTGGGGGTATATCCAGGTTTGTCCTCTT +
Preference number: 1 (lower is better)
Translates to: EQRTSAKWRCMGGNE*LGLHPWGYIQVCPL
Trigger: AAGAGGACAAACCTGGATATACCCCCAAGGATGCAGCCCCAGCCACTCATTTCCTCCCATGCATCTCCACTTGGCAGAGGTTCTCTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp CAAAGGGGAACATGCTCCTTTGCACACTCTCACCTCTGCTCTACGTaGACCCTCACAGCTCGCAGACGAGAAATTCACCTTTTGGGTCCT +
Preference number: 1 (lower is better)
Translates to: QRGTCSFAHSHLCST*TLTARRREIHLLGP
Trigger: AGGACCCAAAAGGTGAATTTCTCGTCTGCGAGCTGTGAGGGTCCACGTAGAGCAGAGGTGAGAGTGTGCAAAGGAGCATGTTCCCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 90 bp CAGGGAAACCAACTAGACTGCAGTAGGGGTCGCCATTCCTATCAGTaGCTCTACTGTTCCCATCTCAGGGAAGGAATTCCACATGCCTCC +
Preference number: 1 (lower is better)
Translates to: QGNQLDCSRGRHSYQ*LYCSHLREGIPHAS
Trigger: GGAGGCATGTGGAATTCCTTCCCTGAGATGGGAACAGTAGAGTCACTGATAGGAATGGCGACCCCTACTGCAGTCTAGTTGGTTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 90 bp GCGATAAGGGAACAGAAAGGGGACAGCAGGGAACAGTCAGAGCTCTaGCTACCACACAGCGAGTCAATGATAGGGCAAATGCAGCACACT +
Preference number: 1 (lower is better)
Translates to: AIREQKGDSREQSEL*LPHSESMIGQMQHT
Trigger: AGTGTGCTGCATTTGCCCTATCATTGACTCGCTGTGTGGTAGTCAGAGCTCTGACTGTTCCCTGCTGTCCCCTTTCTGTTCCCTTATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CCA 90 bp TGTCCTTGTGTTTCAGCCTGCTCTTCACCTCCTTTAGTCCCAGTCTaGCGTGACTCTTTGCAAATTTGTATGCAGTCCGCACAGCGGGAG +
Preference number: 1 (lower is better)
Translates to: CPCVSACSSPPLVPV*RDSLQICMQSAQRE
Trigger: CTCCCGCTGTGCGGACTGCATACAAATTTGCAAAGAGTCACGCCAGACTGGGACTAAAGGAGGTGAAGAGCAGGCTGAAACACAAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp AAGTGGAGATGCATGGGAGGAAATGAGTGGCTGGGGCTGCATCCTTaGGGGTATATCCAGGTTTGTCCTCTTCCGTTTACTATGCTGTGC +
Preference number: 1 (lower is better)
Translates to: KWRCMGGNEWLGLHP*GYIQVCPLPFTMLC
Trigger: GCACAGCATAGTAAACGGAAGAGGACAAACCTGGATATACCCCCAAGGATGCAGCCCCAGCCACTCATTTCCTCCCATGCATCTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 90 bp TTGTGTTTCAGCCTGCTCTTCACCTCCTTTAGTCCCAGTCTGGCGTaGCTCTTTGCAAATTTGTATGCAGTCCGCACAGCGGGAGTTGCT +
Preference number: 1 (lower is better)
Translates to: LCFSLLFTSFSPSLA*LFANLYAVRTAGVA
Trigger: AGCAACTCCCGCTGTGCGGACTGCATACAAATTTGCAAAGAGTCACGCCAGACTGGGACTAAAGGAGGTGAAGAGCAGGCTGAAACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 90 bp TTGAATAGATTACTGGGAGAACAGAGAACCTCTGCCAAGTGGAGATaGATGGGAGGAAATGAGTGGCTGGGGCTGCATCCTTGGGGGTAT +
Preference number: 1 (lower is better)
Translates to: LNRLLGEQRTSAKWR*MGGNEWLGLHPWGY
Trigger: ATACCCCCAAGGATGCAGCCCCAGCCACTCATTTCCTCCCATGCATCTCCACTTGGCAGAGGTTCTCTGTTCTCCCAGTAATCTATTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp CATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTaGACTCTGCAGGGCATTTGGCTTTCGGGCGGTGAACCATGGTTA +
Preference number: 1 (lower is better)
Translates to: HLHSTSVKRRGQQPI*TLQGIWLSGGEPWL
Trigger: TAACCATGGTTCACCGCCCGAAAGCCAAATGCCCTGCAGAGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 90 bp CTCTGCTGCAATCAGAACATCCCTACATGTCCAAAGGCCCTTCTTTaGAAGTTGACAGCTCTGACCATCACAGGGCTGAAACCACAGTGG +
Preference number: 1 (lower is better)
Translates to: LCCNQNIPTCPKALL*KLTALTITGLKPQW
Trigger: CCACTGTGGTTTCAGCCCTGTGATGGTCAGAGCTGTCAACTTTCAAAGAAGGGCCTTTGGACATGTAGGGATGTTCTGATTGCAGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp CACGGCAACAAAGTACTCGGTCAGGTTTCTACTCTCCGGTATCGTTaGGAGTCCAGTTATGTCAGGTGTGATGAAACAGGAGTGCACACT +
Preference number: 1 (lower is better)
Translates to: HGNKVLGQVSTLRYR*ESSYVRCDETGVHT
Trigger: AGTGTGCACTCCTGTTTCATCACACCTGACATAACTGGACTCCCAACGATACCGGAGAGTAGAAACCTGACCGAGTACTTTGTTGCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR CCA 90 bp CAAACTTTGAATAGATTACTGGGAGAACAGAGAACCTCTGCCAAGTaGAGATGCATGGGAGGAAATGAGTGGCTGGGGCTGCATCCTTGG +
Preference number: 1 (lower is better)
Translates to: QTLNRLLGEQRTSAK*RCMGGNEWLGLHPW
Trigger: CCAAGGATGCAGCCCCAGCCACTCATTTCCTCCCATGCATCTCCACTTGGCAGAGGTTCTCTGTTCTCCCAGTAATCTATTCAAAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 90 bp AGAACCATGGCGTGTTCAAACACACTACCTGCACATCTAGGGATCTaGATGTGCTCTCAGGTGTGCTCCAAAGCTAGAGTAATCATGAGG +
Preference number: 1 (lower is better)
Translates to: RTMACSNTLPAHLGI*MCSQVCSKARVIMR
Trigger: CCTCATGATTACTCTAGCTTTGGAGCACACCTGAGAGCACATGCAGATCCCTAGATGTGCAGGTAGTGTGTTTGAACACGCCATGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 90 bp GTGATGAACTTGAACTGGAGATCTGAGCAGAGAAGGGACAGCTGTTaGCTGCAAGAATGTCCACAGCCATTTGCTGTTGACCAGGAATCT +
Preference number: 1 (lower is better)
Translates to: VMNLNWRSEQRRDSC*LQECPQPFAVDQES
Trigger: AGATTCCTGGTCAACAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAGATCTCCAGTTCAAGTTCATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR GCA 90 bp CCTGATCGCAGAGAACTTCAGACTAATATCCCTGCAACCATAAGCTaGAGTAAACCTTTCGTCTCATCCTTTCAAGTTACCATGTCAGTC +
Preference number: 1 (lower is better)
Translates to: PDRRELQTNIPATIS*SKPFVSSFQVTMSV
Trigger: GACTGACATGGTAACTTGAAAGGATGAGACGAAAGGTTTACTGCAGCTTATGGTTGCAGGGATATTAGTCTGAAGTTCTCTGCGATCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp GTCCATTGTGACAGTGAAGTCACAGCAGCAGCAGATGATGGGATTTaGTCACATTATTCCCAGAGTCAGGAAGAAAGAACAATGAATGCA +
Preference number: 1 (lower is better)
Translates to: VHCDSEVTAAADDGI*SHYSQSQEERTMNA
Trigger: TGCATTCATTGTTCTTTCTTCCTGACTCTGGGAATAATGTGACCAAATCCCATCATCTGCTGCTGCTGTGACTTCACTGTCACAATGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 90 bp TGCCATAAGCTGATAGTAAGATTGGCAAGACTAGGTAATCACCCATaGATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACC +
Preference number: 1 (lower is better)
Translates to: CHKLIVRLARLGNHP*ILLGNVFTLTQLQT
Trigger: GGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGATTACCTAGTCTTGCCAATCTTACTATCAGCTTATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR GCA 90 bp CGTAGAAATAAGCACGGGTTTCTTCCCCGTCTTCAGAAGATATCTTaGTTGCCCGTTCAATGTCATCGTCATCATCATCATCATCATACA +
Preference number: 1 (lower is better)
Translates to: RRNKHGFLPRLQKIS*LPVQCHRHHHHHHT
Trigger: TGTATGATGATGATGATGATGACGATGACATTGAACGGGCAAGCAAGATATCTTCTGAAGACGGGGAAGAAACCCGTGCTTATTTCTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 90 bp CTGAACAATATTCCTGATAACTTCAAAGCCATCAAACTAAGAAAGTaGAGTCCCAGGGTGAGGAGGAACCTCAGAAGACATGATCGTAGA +
Preference number: 1 (lower is better)
Translates to: LNNIPDNFKAIKLRK*SPRVRRNLRRHDRR
Trigger: TCTACGATCATGTCTTCTGAGGTTCCTCCTCACCCTGGGACTTCACTTTCTTAGTTTGATGGCTTTGAAGTTATCAGGAATATTGTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CCA 90 bp AATACCTCACTCTCTCTGCATGTACTTTTAATGGCTTGTAAGTCATaGTATCACTGGACTCTGAGCTTCTCAGACCCATTATTTGGTATT +
Preference number: 1 (lower is better)
Translates to: NTSLSLHVLLMACKS*YHWTLSFSDPLFGI
Trigger: AATACCAAATAATGGGTCTGAGAAGCTCAGAGTCCAGTGATACCATGACTTACAAGCCATTAAAAGTACATGCAGAGAGAGTGAGGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 90 bp CTCTCTCTGCATGTACTTTTAATGGCTTGTAAGTCATGGTATCACTaGACTCTGAGCTTCTCAGACCCATTATTTGGTATTTTTAGAGTA +
Preference number: 1 (lower is better)
Translates to: LSLHVLLMACKSWYH*TLSFSDPLFGIFRV
Trigger: TACTCTAAAAATACCAAATAATGGGTCTGAGAAGCTCAGAGTCCAGTGATACCATGACTTACAAGCCATTAAAAGTACATGCAGAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 90 bp GAGTTCTCAAAATTACCTATGAAAGCTACTCTATCTAAAACACAGTaGCTTCACACAGACAGTGCACCTAATATGCACAATGTAGTTGAT +
Preference number: 1 (lower is better)
Translates to: EFSKLPMKATLSKTQ*LHTDSAPNMHNVVD
Trigger: ATCAACTACATTGTGCATATTAGGTGCACTGTCTGTGTGAAGTCACTGTGTTTTAGATAGAGTAGCTTTCATAGGTAATTTTGAGAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CAA 90 bp TGTCAGCCCACCAGAGGAAACGCGTTTCCTTGGGGATGGAGGGAGTaGCCTGCCATGGAGGGCGCTGTCGTCCTGCCCGAGATTCCACTC +
Preference number: 2 (lower is better)
Translates to: CQPTRGNAFPWGWRE*PAMEGAVVLPEIPL
Trigger: GAGTGGAATCTCGGGCAGGACGACAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCTCTGGTGGGCTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGGGGGATGGAGGGAGTTaGCTGCCATGGAGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLGDGGS*LPWRAL
Trigger: CAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCC...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CAA 90 bp ACTTCTTGGAGAAGTCCGACATCCTTTGAAGGCTTCGTGTCCTCTTaGCCAGCCTTCTCCCAGGGAACAAAAGTCGACTGGCGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: TSWRSPTSFEGFVSS*PAFSQGTKVDWRLP
Trigger: CGGGAGCCGCCAGTCGACTTTTGTTCCCTGGGAGAAGGCTGGCAAAGAGGACACGAAGCCTTCAAAGGATGTCGGACTTCTCCAAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGAGTGAAGTCCCAGGGTaGGGAGGAACCTCAGAAGAC +
Preference number: 2 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVSEVPG*GGTSED
Trigger: GTCTTCTGAGGTTCCTCCTCACCCTGGGACTTCACT...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CAA 90 bp ATGCGCCTCTCATGCAGCATGCTGGCGTACAGTCGCAGCATGTTGTaGACATCCACGGCAACAAAGTACTCGGTCAGGTTTCTACTCTCC +
Preference number: 2 (lower is better)
Translates to: MRLSCSMLAYSRSML*TSTATKYSVRFLLS
Trigger: GGAGAGTAGAAACCTGACCGAGTACTTTGTTGCCGTGGATGTCAACAACATGCTGCGACTGTACGCCAGCATGCTGCATGAGAGGCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR-3UTR TCA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGGCCAAGCAGTGCCTCTaGATCTGTCCTTTAGGGTGG +
Preference number: 2 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLAKQCL*ICPLGW
Trigger: CCACCCTAAAGGACAGATTCAGAGGCACTGCTTGGC...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCGGAAACGCGTTTCCTTaGGGATGGAGGGAGTTGCCT +
Preference number: 2 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPGNAFP*GWRELP
Trigger: AGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCC...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CAA 90 bp ATGATGCGCCTCTCATGCAGCATGCTGGCGTACAGTCGCAGCATGTaGTTGACATCCACGGCAACAAAGTACTCGGTCAGGTTTCTACTC +
Preference number: 2 (lower is better)
Translates to: MMRLSCSMLAYSRSM*LTSTATKYSVRFLL
Trigger: GAGTAGAAACCTGACCGAGTACTTTGTTGCCGTGGATGTCAACAACATGCTGCGACTGTACGCCAGCATGCTGCATGAGAGGCGCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR-3UTR TCA 90 bp TTACTGGGAGAACAGAGAACCTCTGCCAAGTGGAGATGCATGGGAGGAAATGAGAGCGCTCCATTCTGTTaGGGAATCTGGTGGGAACCC +
Preference number: 2 (lower is better)
Translates to: LLGEQRTSAKWRCMGGNESAPFC*GIWWEP
Trigger: GGGTTCCCACCAGATTCCTCAACAGAATGGAGCGCT...CTCATTTCCTCCCATGCATCTCCACTTGGCAGAGGTTCTCTGTTCTCCCAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACTCTATCTTTAGCCCCTaGCCTGGCCTGGATGCAAAG +
Preference number: 2 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYSIFSP*PGLDAK
Trigger: CTTTGCATCCAGGCCAGGTCAGGGGCTAAAGATAGA...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGATGCACCCCTCCTGCTTaGCTGCAGGGGACACACTCA +
Preference number: 2 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRCTPPA*LQGTHS
Trigger: TGAGTGTGTCCCCTGCAGGCAAGCAGGAGGGGTGCA...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCATGCCTGCACCCCTCCTaGTTGCCTGCAGGGGACACA +
Preference number: 2 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNACLHPS*LPAGDT
Trigger: TGTGTCCCCTGCAGGCAAGCAGGAGGGGTGCAGGCA...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGCTAGGGATCTGCATGTaGTCTCAGGTGTGCTCCAAA +
Preference number: 2 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVLGICM*SQVCSK
Trigger: TTTGGAGCACACCTGAGAGCACATGCAGATCCCTAG...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp TCACAGTTACAGGTTATTGTCCATTGTGACAGTGAAGTCACAGCAGCAGCAGATTGGGTCCTGGAGCTCTaGCCACTGTGGCCTGAGGAC +
Preference number: 2 (lower is better)
Translates to: SQLQVIVHCDSEVTAAADWVLEL*PLWPED
Trigger: GTCCTCAGGCCACAGTGGGCAGAGCTCCAGGACCCA...ATCTGCTGCTGCTGTGACTTCACTGTCACAATGGACAATAACCTGTAACTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGAGATTCCACTCTCCCTaGTCTCCAGAAGCACACAGC +
Preference number: 2 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLRFHSP*SPEAHS
Trigger: GCTGTGTGCTTCTGGAGACCAGGGAGAGTGGAATCT...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCACTGGGAACGCAGTCCTaGAGTCGGAGCTGGCTTTCC +
Preference number: 2 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNALGTQS*SRSWLS
Trigger: GGAAAGCCAGCTCCGACTTCAGGACTGCGTTCCCAG...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp GACATCCACGGCAACAAAGTACTCGGTCAGGTTTCTACTCTCCGGTATCGTTGGCCTCTTCCAGTTCCTTaGCCAAGTAATCTGCCAGAG +
Preference number: 2 (lower is better)
Translates to: DIHGNKVLGQVSTLRYRWPLPVP*PSNLPE
Trigger: CTCTGGCAGATTACTTGGCCAAGGAACTGGAAGAGG...CCAACGATACCGGAGAGTAGAAACCTGACCGAGTACTTTGTTGCCGTGGATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR-3UTR TCA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCATCAAACTAAGAAAGTaGAGTCCCAGGGTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPIKLRK*SPRVRR
Trigger: CCTCCTCACCCTGGGACTTCACTTTCTTAGTTTGAT...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp AGCGCAGCCGATCCATGGAGACAGGCAGTTAAAGTGCTTAATTTGCTCGAGGTAGTCGCAGCATGTTGTTaGCATCCACGGCAACAAAGT +
Preference number: 2 (lower is better)
Translates to: SAADPWRQAVKVLNLLEVVAACC*HPRQQS
Trigger: ACTTTGTTGCCGTGGATGTCAACAACATGCTGCGAC...TACCTCGAGCAAATTAAGCACTTTAACTGCCTGTCTCCATGGATCGGCTGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR-3UTR GCA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGACACAACATGGCATATaGTTGCAGCACACCCCTTCA +
Preference number: 2 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLTQHGI*LQHTPS
Trigger: TGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGT...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CGGCAACAAAGTACTCGGTCAGGTTTCTACTCTCCGGTATCGTTGGGAGTCCAGGTGATGAAACAGGAGTaGACACTCAAGTTGACAGGA +
Preference number: 2 (lower is better)
Translates to: RQQSTRSGFYSPVSLGVQVMKQE*TLKLTG
Trigger: TCCTGTCAACTTGAGTGTGCACTCCTGTTTCATCAC...CTGGACTCCCAACGATACCGGAGAGTAGAAACCTGACCGAGTACTTTGTTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR-3UTR GCA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGCCTTGTGTTTCAGCCTaGTCTTCACCTCCTTTAGTC +
Preference number: 2 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLPCVSA*SSPPLV
Trigger: GACTAAAGGAGGTGAAGAGCAGGCTGAAACACAAGG...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGCCCCTGACCTGGCCTaGATGCAAAGCCTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPAPDLA*MQSLRE
Trigger: CTCCCTCAGGCTTTGCATCCAGGCCAGGTCAGGGGC...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp GTGCTTAATTTGCTCGAGGTAATAATGATGCGCCTCTCATGCAGCATGCTGGCGACTCTCCGGTATCGTTaGGAGTCCAGTTATGTCAGG +
Preference number: 2 (lower is better)
Translates to: VLNLLEVIMMRLSCSMLATLRYR*ESSYVR
Trigger: CCTGACATAACTGGACTCCCAACGATACCGGAGAGT...CGCCAGCATGCTGCATGAGAGGCGCATCATTATTACCTCGAGCAAATTAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR CAA 90 bp ACATGTGACACAATGACACTACTTCTTGGAGAAGTCCGACATCCTTaGAAGGCTTCGTGTCCTCTTTGCCAGCCTTCTCCCAGGGAACAA +
Preference number: 2 (lower is better)
Translates to: TCDTMTLLLGEVRHP*KASCPLCQPSPREQ
Trigger: TTGTTCCCTGGGAGAAGGCTGGCAAAGAGGACACGAAGCCTTCAAAGGATGTCGGACTTCTCCAAGAAGTAGTGTCATTGTGTCACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CAA 90 bp TCTCTGCTGCAATCAGAACATCCCTACATGTCCAAAGGCCCTTCTTaGAAAGTTGACAGCTCTGACCATCACAGGGCTGAAACCACAGTG +
Preference number: 2 (lower is better)
Translates to: SLLQSEHPYMSKGPS*KVDSSDHHRAETTV
Trigger: CACTGTGGTTTCAGCCCTGTGATGGTCAGAGCTGTCAACTTTCAAAGAAGGGCCTTTGGACATGTAGGGATGTTCTGATTGCAGCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TTACTGGGAGAACAGAGAACCTCTGCCAAGTGGAGATGCATGGGAGGAAATGAGTTTTCCACTTCCCGCTaGAATCAGCTCTTCCATGTG +
Preference number: 2 (lower is better)
Translates to: LLGEQRTSAKWRCMGGNEFSTSR*NQLFHV
Trigger: CACATGGAAGAGCTGATTTCAGCGGGAAGTGGAAAA...CTCATTTCCTCCCATGCATCTCCACTTGGCAGAGGTTCTCTGTTCTCCCAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TTACTGGGAGAACAGAGAACCTCTGCCAAGTGGAGATGCATGGGAGGAAATGAGTGTCATCCATGGATCTaGAGAAATCCAGGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: LLGEQRTSAKWRCMGGNECHPWI*RNPGSW
Trigger: CCAAGAGCCTGGATTTCTTCAGATCCATGGATGACA...CTCATTTCCTCCCATGCATCTCCACTTGGCAGAGGTTCTCTGTTCTCCCAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCACCCCTCCTGCTTGCCTaGAGGGGACACACTCAGAAT +
Preference number: 2 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSPLLLA*RGHTQN
Trigger: ATTCTGAGTGTGTCCCCTGCAGGCAAGCAGGAGGGG...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CTGCATGTACTTTTAATGGCTTGTAAGTCATGGTATCACTGGACTCTGAGCTTCCCTCTCTTCTTTGCCTaGACCCCTCCTGCTTGCCTG +
Preference number: 2 (lower is better)
Translates to: LHVLLMACKSWYHWTLSFPLFFA*TPPACL
Trigger: CAGGCAAGCAGGAGGGGTGCAGGCAAAGAAGAGAGG...GAAGCTCAGAGTCCAGTGATACCATGACTTACAAGCCATTAAAAGTACATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACGCCAGTGTTTTAAGCTaGAGTCAGGATGCTCTCATT +
Preference number: 2 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYASVLS*SQDALI
Trigger: AATGAGAGCATCCTGACTGCAGCTTAAAACACTGGC...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGGTTACCTTTAACTTCTaGAAGGCAACCAGGAACAAC +
Preference number: 2 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVVTFNF*KATRNN
Trigger: GTTGTTCCTGGTTGCCTTCCAGAAGTTAAAGGTAAC...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp AGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCCTTCAGATCGCCATTCCTATCAGTaGCTCTACTGTTCCCATCTC +
Preference number: 2 (lower is better)
Translates to: RCSKSTQHGICLQHTPSDRHSYQ*LYCSHL
Trigger: GAGATGGGAACAGTAGAGTCACTGATAGGAATGGCG...ATCTGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGCAGGAGCTGGACATCTaGACAATATTCCTGATAACT +
Preference number: 2 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLQELDI*TIFLIT
Trigger: AGTTATCAGGAATATTGTTCAGATGTCCAGCTCCTG...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGCAGGGAACTTATATTTaGTTTGGTTTGGGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVQGTYI*FGLGKA
Trigger: TGCTTTGCCCAAACCAAATCAAATATAAGTTCCCTG...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCAGCCAAGCAGTGCCTCTaGATCTGTCCTTTAGGGTGG +
Preference number: 2 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSAKQCL*ICPLGW
Trigger: CCACCCTAAAGGACAGATTCAGAGGCACTGCTTGGC...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACATCTTGATCAGTTCATaGTCAGCCAGGTTAGTACAG +
Preference number: 2 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYILISS*SARLVQ
Trigger: CTGTACTAACCTGGCTGAGCATGAACTGATCAAGAT...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGATCTTGATCAGTTCATaGTCAGCCAGGTTAGTACAG +
Preference number: 2 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLILISS*SARLVQ
Trigger: CTGTACTAACCTGGCTGAGCATGAACTGATCAAGAT...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCAAGCCTATCTGGACTCTaGAGGGCATTTGGCTTTCGG +
Preference number: 2 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNASLSGL*RAFGFR
Trigger: CCGAAAGCCAAATGCCCTGCAGAGTCCAGATAGGCT...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTCCCCTCCTGCTTGCCTaGAGGGGACACACTCAGAAT +
Preference number: 2 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPPLLLA*RGHTQN
Trigger: ATTCTGAGTGTGTCCCCTGCAGGCAAGCAGGAGGGG...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp TTGTTGACATCCACGGCAACAAAGTACTCGGTCAGGTTTCTACTCTCCGGTATCGTTGACAGGAGTGTTTaGCTTTGGTACTGGGTGGTT +
Preference number: 2 (lower is better)
Translates to: LLTSTATKYSVRFLLSGIVDRSV*LWYWVV
Trigger: AACCACCCAGTACCAAAGGCAAACACTCCTGTCAAC...GATACCGGAGAGTAGAAACCTGACCGAGTACTTTGTTGCCGTGGATGTCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR-3UTR GCA 90 bp TTACTGGGAGAACAGAGAACCTCTGCCAAGTGGAGATGCATGGGAGGAAATGAGCCTGCAACCATAAGCTaGAGTAAACCTTTCGTCTCA +
Preference number: 2 (lower is better)
Translates to: LLGEQRTSAKWRCMGGNEPATIS*SKPFVS
Trigger: TGAGACGAAAGGTTTACTGCAGCTTATGGTTGCAGG...CTCATTTCCTCCCATGCATCTCCACTTGGCAGAGGTTCTCTGTTCTCCCAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCCACATTCACGTTGCTTaGAAAACATGGCTACATGTC +
Preference number: 2 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPHIHVA*KTWLHV
Trigger: GACATGTAGCCATGTTTTCCAAGCAACGTGAATGTG...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGGTTACCTTTAACTTCTaGAAGGCAACCAGGAACAAC +
Preference number: 2 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLVTFNF*KATRNN
Trigger: GTTGTTCCTGGTTGCCTTCCAGAAGTTAAAGGTAAC...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp AGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCCTTCAGATCTTCCTCTCTCTGTTTaGGAAGCTTCAGGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: RCSKSTQHGICLQHTPSDLPLSV*EASGAA
Trigger: TGCTGCTCCTGAAGCTTCCCAAACAGAGAGAGGAAG...ATCTGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCACGCCATTCCTATCAGTaGCTCTACTGTTCCCATCTC +
Preference number: 2 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNARHSYQ*LYCSHL
Trigger: GAGATGGGAACAGTAGAGTCACTGATAGGAATGGCG...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TTACTGGGAGAACAGAGAACCTCTGCCAAGTGGAGATGCATGGGAGGAAATGAGTCTGCTAGAGTGCATTaGAACTGGAAAAGAATGGTG +
Preference number: 2 (lower is better)
Translates to: LLGEQRTSAKWRCMGGNESARVH*NWKRMV
Trigger: CACCATTCTTTTCCAGTTTCAATGCACTCTAGCAGA...CTCATTTCCTCCCATGCATCTCCACTTGGCAGAGGTTCTCTGTTCTCCCAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACGCTCAGTATATAGAATaGCAGTGCAAACAGAAACAC +
Preference number: 2 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYAQYIE*QCKQKH
Trigger: GTGTTTCTGTTTGCACTGTCATTCTATATACTGAGC...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CTGCATGTACTTTTAATGGCTTGTAAGTCATGGTATCACTGGACTCTGAGCTTCCTTGAACTGGAGATCTaGGCAGAGAAGGGACAGCTG +
Preference number: 2 (lower is better)
Translates to: LHVLLMACKSWYHWTLSFLELEI*AEKGQL
Trigger: CAGCTGTCCCTTCTCTGCTCAGATCTCCAGTTCAAG...GAAGCTCAGAGTCCAGTGATACCATGACTTACAAGCCATTAAAAGTACATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CTGCATGTACTTTTAATGGCTTGTAAGTCATGGTATCACTGGACTCTGAGCTTCAGCCTATCTGGACTCTaGAGGGCATTTGGCTTTCGG +
Preference number: 2 (lower is better)
Translates to: LHVLLMACKSWYHWTLSFSLSGL*RAFGFR
Trigger: CCGAAAGCCAAATGCCCTGCAGAGTCCAGATAGGCT...GAAGCTCAGAGTCCAGTGATACCATGACTTACAAGCCATTAAAAGTACATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGCCTCTCTTCTTTGCCTaGACCCCTCCTGCTTGCCTG +
Preference number: 2 (lower is better)
Translates to: EPEVLRRQFTHESDELELPLFFA*TPPACL
Trigger: CAGGCAAGCAGGAGGGGTGCAGGCAAAGAAGAGAGG...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCACTAGGGATCTGCATGTaGTCTCAGGTGTGCTCCAAA +
Preference number: 2 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNALGICM*SQVCSK
Trigger: TTTGGAGCACACCTGAGAGCACATGCAGATCCCTAG...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCATACAGTACAGGAGCTaGACATCTGAACAATATTCC +
Preference number: 2 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPIQYRS*TSEQYS
Trigger: GGAATATTGTTCAGATGTCCAGCTCCTGTACTGTAT...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACATACAGTACAGGAGCTaGACATCTGAACAATATTCC +
Preference number: 2 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYIQYRS*TSEQYS
Trigger: GGAATATTGTTCAGATGTCCAGCTCCTGTACTGTAT...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGAAGAAAGTGTATTCATaGTCTAGTGACATAGCTGAC +
Preference number: 2 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVKKVYS*SSDIAD
Trigger: GTCAGCTATGTCACTAGACCATGAATACACTTTCTT...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACCTGAAAGATTTATTTTaGGAGCTCCAGTTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYLKDLF*ELQLLV
Trigger: CACCAACAACTGGAGCTCCCAAAATAAATCTTTCAG...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TACAGTCGCAGCATGTTGTTGACATCCACGGCAACAAAGTACTCGGTCAGGTTTAGGAGTGTTTGCCTTTaGTACTGGGTGGTTATAGAG +
Preference number: 2 (lower is better)
Translates to: YSRSMLLTSTATKYSVRFRSVCL*YWVVIE
Trigger: CTCTATAACCACCCAGTACCAAAGGCAAACACTCCT...AAACCTGACCGAGTACTTTGTTGCCGTGGATGTCAACAACATGCTGCGACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR-3UTR CCA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCAAGAAATCCAGGCTCTTaGCAGGCGCCAGCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSRNPGS*QAPAFL
Trigger: AAGGAAAGCTGGCGCCTGCCAAGAGCCTGGATTTCT...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCAAAGTGGAGCCTGACCTaGTGTTTGCTTCACTTCTGC +
Preference number: 2 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNAKWSLT*CLLHFC
Trigger: GCAGAAGTGAAGCAAACACCAGGTCAGGCTCCACTT...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TCACAGTTACAGGTTATTGTCCATTGTGACAGTGAAGTCACAGCAGCAGCAGATGCATCCCATAGCAGGTaGATCTTCTCTGCTGCAATC +
Preference number: 2 (lower is better)
Translates to: SQLQVIVHCDSEVTAAADASHSR*IFSAAI
Trigger: GATTGCAGCAGAGAAGATCCACCTGCTATGGGATGC...ATCTGCTGCTGCTGTGACTTCACTGTCACAATGGACAATAACCTGTAACTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCACGCCATTCCTATCAGTaGCTCTACTGTTCCCATCTC +
Preference number: 2 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSRHSYQ*LYCSHL
Trigger: GAGATGGGAACAGTAGAGTCACTGATAGGAATGGCG...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTAAGTGAAGTCCCAGGGTaGGGAGGAACCTCAGAAGAC +
Preference number: 2 (lower is better)
Translates to: LGHTIRYQHSILITVTPLSEVPG*GGTSED
Trigger: GTCTTCTGAGGTTCCTCCTCACCCTGGGACTTCACT...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp TGGTGCTCAGTATATAGAATGACAGTGCAAACAGAAACACATATTTTCAATAGCTGCACCCCTCCTGCTTaGCTGCAGGGGACACACTCA +
Preference number: 2 (lower is better)
Translates to: WCSVYRMTVQTETHIFNSCTPPA*LQGTHS
Trigger: TGAGTGTGTCCCCTGCAGGCAAGCAGGAGGGGTGCA...GCTATTGAAAATATGTGTTTCTGTTTGCACTGTCATTCTATATACTGAGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGGAGAATCACAAAGGATaGATTTTGATACTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLENHKG*ILILLC
Trigger: GCAGAGAAGTATCAAAATGCATCCTTTGTGATTCTC...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATCTAGGGATCTGCATGTaGTCTCAGGTGTGCTCCAAA +
Preference number: 2 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDLGICM*SQVCSK
Trigger: TTTGGAGCACACCTGAGAGCACATGCAGATCCCTAG...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CAA 90 bp AGAAATAAGCACGGGTTTCTTCCCCGTCTTCAGAAGATATCTTGCTaGCCCGTTCAATGTCATCGTCATCATCATCATCATCATACAGGG +
Preference number: 2 (lower is better)
Translates to: RNKHGFLPRLQKISC*PVQCHRHHHHHHTG
Trigger: CCCTGTATGATGATGATGATGATGACGATGACATTGAACGGGCAAGCAAGATATCTTCTGAAGACGGGGAAGAAACCCGTGCTTATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp GTTCATGGTAGAAAAAGGCATCACTGCTCTGCAGGACAAGATAACTCCTCTTTCTACAGATCCATGAGATaGACAGACAGGGAAACCAAC +
Preference number: 2 (lower is better)
Translates to: VHGRKRHHCSAGQDNSSFYRSMR*TDRETN
Trigger: GTTGGTTTCCCTGTCTGTTCATCTCATGGATCTGTA...GAAAGAGGAGTTATCTTGTCCTGCAGAGCAGTGATGCCTTTTTCTACCATGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGATCTGCTAGAGTGCATTaGAACTGGAAAAGAATGGTG +
Preference number: 2 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRSARVH*NWKRMV
Trigger: CACCATTCTTTTCCAGTTTCAATGCACTCTAGCAGA...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp AGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCCTTCAGATTCCTCTTTCAAGCTTTaGATCACGCGTCATCTGTAT +
Preference number: 2 (lower is better)
Translates to: RCSKSTQHGICLQHTPSDSSFKL*ITRHLY
Trigger: ATACAGATGACGCGTGATGCAAAGCTTGAAAGAGGA...ATCTGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCAAACGGCCATCAGTACTaGAAAGGGACAATGTCAGGT +
Preference number: 2 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSNGHQY*KGTMSG
Trigger: ACCTGACATTGTCCCTTTGCAGTACTGATGGCCGTT...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp TCACAGTTACAGGTTATTGTCCATTGTGACAGTGAAGTCACAGCAGCAGCAGATACAAACTGCCCACAGTaGTTTCTGCCTCATTCAAGT +
Preference number: 2 (lower is better)
Translates to: SQLQVIVHCDSEVTAAADTNCPQ*FLPHSS
Trigger: ACTTGAATGAGGCAGAAAGCACTGTGGGCAGTTTGT...ATCTGCTGCTGCTGTGACTTCACTGTCACAATGGACAATAACCTGTAACTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGGTTGCTTGGAAAACATaGCTACATGTCTTCATAAAA +
Preference number: 2 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLVAWKT*LHVFIK
Trigger: TTTTATGAAGACATGTAGCCATGTTTTCCAAGCAAC...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTATCAAACTAAGAAAGTaGAGTCCCAGGGTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPIKLRK*SPRVRR
Trigger: CCTCCTCACCCTGGGACTTCACTTTCTTAGTTTGAT...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGATTTCTTACAGTATTATaGAAGCTAGTCCCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRFLTVL*KLVPRE
Trigger: TTCCCTGGGGACTAGCTTTCATAATACTGTAAGAAA...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGACTCTAAGTTACTCCTaGACTGGGGGAAACGGCCAT +
Preference number: 2 (lower is better)
Translates to: EPEVLRRQFTHESDELELTLSYS*TGGNGH
Trigger: ATGGCCGTTTCCCCCAGTTCAGGAGTAACTTAGAGT...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTAAGTCCGACATCCTTTaGAGGCTTCGTGTCCTCTTT +
Preference number: 2 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPKSDIL*RLRVLF
Trigger: AAAGAGGACACGAAGCCTTCAAAGGATGTCGGACTT...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp TGGTGCTCAGTATATAGAATGACAGTGCAAACAGAAACACATATTTTCAATAGCCCTTCCTCTCTTCTTTaGCTGCACCCCTCCTGCTTG +
Preference number: 2 (lower is better)
Translates to: WCSVYRMTVQTETHIFNSPSSLL*LHPSCL
Trigger: CAAGCAGGAGGGGTGCAGGCAAAGAAGAGAGGAAGG...GCTATTGAAAATATGTGTTTCTGTTTGCACTGTCATTCTATATACTGAGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATTGCGAAGCACCTACTTaGTTCCAGTTTTCTGGACAT +
Preference number: 2 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDCEAPT*FQFSGH
Trigger: ATGTCCAGAAAACTGGAAGCAAGTAGGTGCTTCGCA...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTAGGGACAGCTGTTGACTaGAAGAATGTCCACAGCCAT +
Preference number: 2 (lower is better)
Translates to: LGHTIRYQHSILITVTPLGTAVD*KNVHSH
Trigger: ATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCC...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCAGTTACCTTTAACTTCTaGAAGGCAACCAGGAACAAC +
Preference number: 2 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNAVTFNF*KATRNN
Trigger: GTTGTTCCTGGTTGCCTTCCAGAAGTTAAAGGTAAC...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGGGAGCTCCAGTTGTTaGTGCTCAGTATATAGAATG +
Preference number: 2 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDGSSSC*CSVYRM
Trigger: CATTCTATATACTGAGCACCAACAACTGGAGCTCCC...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCAGTACAAGTTAGTACCTaGTTTAACAGCACAGCAGAA +
Preference number: 2 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNAVQVST*FNSTAE
Trigger: TTCTGCTGTGCTGTTAAATCAGGTACTAACTTGTAC...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGGGCACTTTTCTTCTGTaGTCTCCTCCCTCAAAGCTG +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQGTFLL*SPPSKL
Trigger: CAGCTTTGAGGGAGGAGATCACAGAAGAAAAGTGCC...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGAAGTGACATAGCTGACTaGATAAAGCACTTAATACCA +
Preference number: 2 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRSDIAD*IKHLIP
Trigger: TGGTATTAAGTGCTTTATTCAGTCAGCTATGTCACT...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGATTAGACAATGAGTTCTaGTGTGAAAAAGAGACCTCA +
Preference number: 2 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRLDNEF*CEKETS
Trigger: TGAGGTCTCTTTTTCACATCAGAACTCATTGTCTAA...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CTGCATGTACTTTTAATGGCTTGTAAGTCATGGTATCACTGGACTCTGAGCTTCCAGAAGCAGCTTGTCTaGAAGATTTATTTTGGGAGC +
Preference number: 2 (lower is better)
Translates to: LHVLLMACKSWYHWTLSFQKQLV*KIYFGS
Trigger: GCTCCCAAAATAAATCTTTCAGACAAGCTGCTTCTG...GAAGCTCAGAGTCCAGTGATACCATGACTTACAAGCCATTAAAAGTACATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATTCTATCTTTAGCCCCTaGCCTGGCCTGGATGCAAAG +
Preference number: 2 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYSIFSP*PGLDAK
Trigger: CTTTGCATCCAGGCCAGGTCAGGGGCTAAAGATAGA...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGCACCAACCCAGAACCTaGAGTTCTCAGGAGACAATT +
Preference number: 2 (lower is better)
Translates to: EPEVLRRQFTHESDELELHQPRT*SSQETI
Trigger: AATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTG...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGACACAACATGGCATATaGTTGCAGCACACCCCTTCA +
Preference number: 2 (lower is better)
Translates to: EPEVLRRQFTHESDELELTQHGI*LQHTPS
Trigger: TGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGT...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp GGCTATGAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCGTTGCTTGGAAAACATaGCTACATGTCTTCATAAAA +
Preference number: 2 (lower is better)
Translates to: GYEHLHSTSVKRRGQQPIVAWKT*LHVFIK
Trigger: TTTTATGAAGACATGTAGCCATGTTTTCCAAGCAAC...GATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTCATAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCAATACAGTACAGGAGCTaGACATCTGAACAATATTCC +
Preference number: 2 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNAIQYRS*TSEQYS
Trigger: GGAATATTGTTCAGATGTCCAGCTCCTGTACTGTAT...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGAAAGAAAGTGTATTCATaGTCTAGTGACATAGCTGAC +
Preference number: 2 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRKKVYS*SSDIAD
Trigger: GTCAGCTATGTCACTAGACCATGAATACACTTTCTT...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TGGTGCTCAGTATATAGAATGACAGTGCAAACAGAAACACATATTTTCAATAGCGGCACTTTTCTTCTGTaGTCTCCTCCCTCAAAGCTG +
Preference number: 2 (lower is better)
Translates to: WCSVYRMTVQTETHIFNSGTFLL*SPPSKL
Trigger: CAGCTTTGAGGGAGGAGATCACAGAAGAAAAGTGCC...GCTATTGAAAATATGTGTTTCTGTTTGCACTGTCATTCTATATACTGAGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGTTTTCCACTTCCCGCTaGAATCAGCTCTTCCATGTG +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQFSTSR*NQLFHV
Trigger: CACATGGAAGAGCTGATTTCAGCGGGAAGTGGAAAA...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCAGCTCAGTATATAGAATaGCAGTGCAAACAGAAACAC +
Preference number: 2 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSAQYIE*QCKQKH
Trigger: GTGTTTCTGTTTGCACTGTCATTCTATATACTGAGC...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTCAGAAGCAGCTTGTCTaGAAGATTTATTTTGGGAGC +
Preference number: 2 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPQKQLV*KIYFGS
Trigger: GCTCCCAAAATAAATCTTTCAGACAAGCTGCTTCTG...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTAGGACTCCCAGCAACATaGCTAGGTTCTTCCTTTATA +
Preference number: 2 (lower is better)
Translates to: LGHTIRYQHSILITVTPLGLPAT*LGSSFI
Trigger: TATAAAGGAAGAACCTAGTCATGTTGCTGGGAGTCC...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGCACCAACCCAGAACCTaGAGTTCTCAGGAGACAATT +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQHQPRT*SSQETI
Trigger: AATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTG...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGTGCGAAGCACCTACTTaGTTCCAGTTTTCTGGACAT +
Preference number: 2 (lower is better)
Translates to: EPEVLRRQFTHESDELELCEAPT*FQFSGH
Trigger: ATGTCCAGAAAACTGGAAGCAAGTAGGTGCTTCGCA...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTAACCAACATTAAGAGATaGCTGGGGAGAGCCTACATT +
Preference number: 2 (lower is better)
Translates to: LGHTIRYQHSILITVTPLTNIKR*LGRAYI
Trigger: AATGTAGGCTCTCCCCAGGCATCTCTTAATGTTGGT...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp TGGTGCTCAGTATATAGAATGACAGTGCAAACAGAAACACATATTTTCAATAGCGTCTGGGAAAGCTTGTaGTTCTCTCTGTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: WCSVYRMTVQTETHIFNSVWESL*FSLFSP
Trigger: GGGAGAGAACAGAGAGAAGCACAAGCTTTCCCAGAC...GCTATTGAAAATATGTGTTTCTGTTTGCACTGTCATTCTATATACTGAGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATCTTCAGAAGATATCTTaGTTGCCCGTTCAATGTCAT +
Preference number: 2 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDLQKIS*LPVQCH
Trigger: ATGACATTGAACGGGCAAGCAAGATATCTTCTGAAG...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGGGGAGCTCCAGTTGTTaGTGCTCAGTATATAGAATG +
Preference number: 2 (lower is better)
Translates to: EPEVLRRQFTHESDELELGSSSC*CSVYRM
Trigger: CATTCTATATACTGAGCACCAACAACTGGAGCTCCC...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGCCAACAAGTATTTCATaGGCATTCCTGGGTCACACC +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQPTSIS*AFLGHT
Trigger: GGTGTGACCCAGGAATGCCCATGAAATACTTGTTGG...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTAGTGATGAACTTGAACTaGAGATCTGAGCAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: LGHTIRYQHSILITVTPLVMNLN*RSEQRR
Trigger: CCTTCTCTGCTCAGATCTCCAGTTCAAGTTCATCAC...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATCCAGGTTATTCTCACTaGGAGCGTTGGACTTGTTCG +
Preference number: 2 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYPGYSH*ERWTCS
Trigger: CGAACAAGTCCAACGCTCCCAGTGAGAATAACCTGG...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CAA 90 bp ATAACGCATTCCATTAGCGCTGCTGTTCAGTACCTTGTTTTATTTTaGGTATATCTGCATATTGCATCCAGAGTTACAAACTGCCCACAG +
Preference number: 2 (lower is better)
Translates to: ITHSISAAVQYLVLF*VYLHIASRVTNCPQ
Trigger: CTGTGGGCAGTTTGTAACTCTGGATGCAATATGCAGATATACCAAAAATAAAACAAGGTACTGAACAGCAGCGCTAATGGAATGCGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGTACAGATCCATGAGATaGACAGACAGGGAAACCAAC +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQYRSMR*TDRETN
Trigger: GTTGGTTTCCCTGTCTGTTCATCTCATGGATCTGTA...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp AGGCTATTTTCCATCAGTTTTGACATCTTGATCAGTTCATGCTCAGCCAGGTTAGTACAAGTTAGTACCTaGTTTAACAGCACAGCAGAA +
Preference number: 2 (lower is better)
Translates to: RLFSISFDILISSCSARLVQVST*FNSTAE
Trigger: TTCTGCTGTGCTGTTAAATCAGGTACTAACTTGTAC...TAACCTGGCTGAGCATGAACTGATCAAGATGTCAAAACTGATGGAAAATAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTACAGGAGCTGGACATCTaGACAATATTCCTGATAACT +
Preference number: 2 (lower is better)
Translates to: LGHTIRYQHSILITVTPLQELDI*TIFLIT
Trigger: AGTTATCAGGAATATTGTTCAGATGTCCAGCTCCTG...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCAACAAAGGATGCATTTTaGTACTTCTCTGCCCTAAAT +
Preference number: 2 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSTKDAF*YFSALN
Trigger: ATTTAGGGCAGAGAAGTATCAAAATGCATCCTTTGT...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp CTGCATGTACTTTTAATGGCTTGTAAGTCATGGTATCACTGGACTCTGAGCTTCAGTGACATAGCTGACTaGATAAAGCACTTAATACCA +
Preference number: 2 (lower is better)
Translates to: LHVLLMACKSWYHWTLSFSDIAD*IKHLIP
Trigger: TGGTATTAAGTGCTTTATTCAGTCAGCTATGTCACT...GAAGCTCAGAGTCCAGTGATACCATGACTTACAAGCCATTAAAAGTACATGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATCACCAACCCAGAACCTaGAGTTCTCAGGAGACAATT +
Preference number: 2 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYHQPRT*SSQETI
Trigger: AATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTG...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGTCCTCTTTCAAGCTTTaGATCACGCGTCATCTGTAT +
Preference number: 2 (lower is better)
Translates to: EPEVLRRQFTHESDELELSSFKL*ITRHLY
Trigger: ATACAGATGACGCGTGATGCAAAGCTTGAAAGAGGA...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGGCCAGTGTTTTAAGCTaGAGTCAGGATGCTCTCATT +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQASVLS*SQDALI
Trigger: AATGAGAGCATCCTGACTGCAGCTTAAAACACTGGC...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGTGCGAAGCACCTACTTaGTTCCAGTTTTCTGGACAT +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQCEAPT*FQFSGH
Trigger: ATGTCCAGAAAACTGGAAGCAAGTAGGTGCTTCGCA...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGTCAACGTGGGGAAAATaGTCAGAGAATCAGACTGCT +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQSTWGK*SENQTA
Trigger: AGCAGTCTGATTCTCTGAGCATTTTCCCCACGTTGA...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATCCAACAAGTATTTCATaGGCATTCCTGGGTCACACC +
Preference number: 2 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYPTSIS*AFLGHT
Trigger: GGTGTGACCCAGGAATGCCCATGAAATACTTGTTGG...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TCTTGCCTTTTTCACAGTAATGAAGACCTTCCAGGAGAATATCAGACTAAGTGCGAATCTGCTATTACCTaGTTAGGAGCAGCTATTATC +
Preference number: 2 (lower is better)
Translates to: SCLFHSNEDLPGEYQTKCESAIT*LGAAII
Trigger: GATAATAGCTGCTCCTAACCAGGTAATAGCAGATTC...GCACTTAGTCTGATATTCTCCTGGAAGGTCTTCATTACTGTGAAAAAGGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
3UTR-3UTR TCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGGTACAAGTTAGTACCTaGTTTAACAGCACAGCAGAA +
Preference number: 2 (lower is better)
Translates to: EPEVLRRQFTHESDELELVQVST*FNSTAE
Trigger: TTCTGCTGTGCTGTTAAATCAGGTACTAACTTGTAC...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGTCTGCTAGAGTGCATTaGAACTGGAAAAGAATGGTG +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQSARVH*NWKRMV
Trigger: CACCATTCTTTTCCAGTTTCAATGCACTCTAGCAGA...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGACTACTGGCGATATGTaGGGTTATATACGCACACTT +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQTTGDM*GYIRTL
Trigger: AAGTGTGCGTATATAACCCCACATATCGCCAGTAGT...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp CTGCATGTACTTTTAATGGCTTGTAAGTCATGGTATCACTGGACTCTGAGCTTCTTATTGGGTACTTTATaGCAAAGCAGAGTTCATTCA +
Preference number: 2 (lower is better)
Translates to: LHVLLMACKSWYHWTLSFLLGTL*QSRVHS
Trigger: TGAATGAACTCTGCTTTGCCATAAAGTACCCAATAA...GAAGCTCAGAGTCCAGTGATACCATGACTTACAAGCCATTAAAAGTACATGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGTTTCTTACAGTATTATaGAAGCTAGTCCCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQFLTVL*KLVPRE
Trigger: TTCCCTGGGGACTAGCTTTCATAATACTGTAAGAAA...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGGCTCAGTATATAGAATaGCAGTGCAAACAGAAACAC +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQAQYIE*QCKQKH
Trigger: GTGTTTCTGTTTGCACTGTCATTCTATATACTGAGC...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp TGGTGCTCAGTATATAGAATGACAGTGCAAACAGAAACACATATTTTCAATAGCATCTTGATCAGTTCATaGTCAGCCAGGTTAGTACAG +
Preference number: 2 (lower is better)
Translates to: WCSVYRMTVQTETHIFNSILISS*SARLVQ
Trigger: CTGTACTAACCTGGCTGAGCATGAACTGATCAAGAT...GCTATTGAAAATATGTGTTTCTGTTTGCACTGTCATTCTATATACTGAGCACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTAGAGAATCACAAAGGATaGATTTTGATACTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: LGHTIRYQHSILITVTPLENHKG*ILILLC
Trigger: GCAGAGAAGTATCAAAATGCATCCTTTGTGATTCTC...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR GCA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTAAAAAAGTATTGGCAATaGCCTTTACAAGCCTCAACA +
Preference number: 2 (lower is better)
Translates to: LGHTIRYQHSILITVTPLKKYWQ*PLQAST
Trigger: TGTTGAGGCTTGTAAAGGGCATTGCCAATACTTTTT...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGAATATCTTCTCAGATTaGAGACTCACTGACACCAAC +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQNIFSD*RLTDTN
Trigger: GTTGGTGTCAGTGAGTCTCCAATCTGAGAAGATATT...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGAATGACACTACTTCTTaGAGAAGTCCGACATCCTTT +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQNDTTS*RSPTSF
Trigger: AAAGGATGTCGGACTTCTCCAAGAAGTAGTGTCATT...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TGGTGCTCAGTATATAGAATGACAGTGCAAACAGAAACACATATTTTCAATAGCTTTCTTACAGTATTATaGAAGCTAGTCCCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: WCSVYRMTVQTETHIFNSFLTVL*KLVPRE
Trigger: TTCCCTGGGGACTAGCTTTCATAATACTGTAAGAAA...GCTATTGAAAATATGTGTTTCTGTTTGCACTGTCATTCTATATACTGAGCACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATCTGAAAGATTTATTTTaGGAGCTCCAGTTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYLKDLF*ELQLLV
Trigger: CACCAACAACTGGAGCTCCCAAAATAAATCTTTCAG...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGGAAAAACACAACTCCTaGATTATAACGCATTCCATT +
Preference number: 2 (lower is better)
Translates to: EPEVLRRQFTHESDELELEKHNS*IITHSI
Trigger: AATGGAATGCGTTATAATCCAGGAGTTGTGTTTTTC...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGTTTCAGCGACATTATTaGGTACTTTATGGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQFQRHY*VLYGKA
Trigger: TGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAA...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR TCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATAGTGACATAGCTGACTaGATAAAGCACTTAATACCA +
Preference number: 2 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYSDIAD*IKHLIP
Trigger: TGGTATTAAGTGCTTTATTCAGTCAGCTATGTCACT...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGGAAAAACACAACTCCTaGATTATAACGCATTCCATT +
Preference number: 2 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQEKHNS*IITHSI
Trigger: AATGGAATGCGTTATAATCCAGGAGTTGTGTTTTTC...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CCA 90 bp TGGTGCTCAGTATATAGAATGACAGTGCAAACAGAAACACATATTTTCAATAGCGTTGCTTGGAAAACATaGCTACATGTCTTCATAAAA +
Preference number: 2 (lower is better)
Translates to: WCSVYRMTVQTETHIFNSVAWKT*LHVFIK
Trigger: TTTTATGAAGACATGTAGCCATGTTTTCCAAGCAAC...GCTATTGAAAATATGTGTTTCTGTTTGCACTGTCATTCTATATACTGAGCACCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 72 bp CTGGCGGCTCCCGGGGCCGGGCACCGACAGATCCTCTaGCTGAAGTGGAGCCTGACCTGGTGTTTGCTTCAC +
Preference number: 3 (lower is better)
Translates to: LAAPGAGHRQIL*LKWSLTWCLLH
Trigger: GTGAAGCAAACACCAGGTCAGGCTCCACTTCAGTCAGAGGATCTGTCGGTGCCCGGCCCCGGGAGCCGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 72 bp GGAGGGAGTTGCCTGCCATGGAGGGCGCTGTCGTCCTaGCCGAGATTCCACTCTCCCTGGTCTCCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: GGSCLPWRALSS*PRFHSPWSPEA
Trigger: TGCTTCTGGAGACCAGGGAGAGTGGAATCTCGGGCAGGACGACAGCGCCCTCCATGGCAGGCAACTCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 72 bp CCAGAGGAAACGCGTTTCCTTGGGGATGGAGGGAGTTaGCTGCCATGGAGGGCGCTGTCGTCCTGCCCGAGA +
Preference number: 3 (lower is better)
Translates to: PEETRFLGDGGS*LPWRALSSCPR
Trigger: TCTCGGGCAGGACGACAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 72 bp TCTTTGCCAGCCTTCTCCCAGGGAACAAAAGTCGACTaGCGGCTCCCGGGGCCGGGCACCGACAGATCCTCT +
Preference number: 3 (lower is better)
Translates to: SLPAFSQGTKVD*RLPGPGTDRSS
Trigger: AGAGGATCTGTCGGTGCCCGGCCCCGGGAGCCGCCAGTCGACTTTTGTTCCCTGGGAGAAGGCTGGCAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 72 bp AGGAAACGCGTTTCCTTGGGGATGGAGGGAGTTGCCTaGCATGGAGGGCGCTGTCGTCCTGCCCGAGATTCC +
Preference number: 3 (lower is better)
Translates to: RKRVSLGMEGVA*HGGRCRPARDS
Trigger: GGAATCTCGGGCAGGACGACAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 72 bp ACGCGTTTCCTTGGGGATGGAGGGAGTTGCCTGCCATaGAGGGCGCTGTCGTCCTGCCCGAGATTCCACTCT +
Preference number: 3 (lower is better)
Translates to: TRFLGDGGSCLP*RALSSCPRFHS
Trigger: AGAGTGGAATCTCGGGCAGGACGACAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCCAAGGAAACGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 72 bp TGTCAGCCCACCAGAGGAAACGCGTTTCCTTGGGGATaGAGGGAGTTGCCTGCCATGGAGGGCGCTGTCGTC +
Preference number: 3 (lower is better)
Translates to: CQPTRGNAFPWG*RELPAMEGAVV
Trigger: GACGACAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCTCTGGTGGGCTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 72 bp AGACTCTGTCAGCCCACCAGAGGAAACGCGTTTCCTTaGGGATGGAGGGAGTTGCCTGCCATGGAGGGCGCT +
Preference number: 3 (lower is better)
Translates to: RLCQPTRGNAFP*GWRELPAMEGA
Trigger: AGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCTCTGGTGGGCTGACAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 72 bp CCTCTCTCTGTTTGGGAAGCTTCAGGAGCAGCAGGCTaGGAACGCAGTCCTGAAGTCGGAGCTGGCTTTCCC +
Preference number: 3 (lower is better)
Translates to: PLSVWEASGAAG*ERSPEVGAGFP
Trigger: GGGAAAGCCAGCTCCGACTTCAGGACTGCGTTCCCAGCCTGCTGCTCCTGAAGCTTCCCAAACAGAGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 72 bp GGACCCTCACAGCTCGCAGACGAGAAATTCACCTTTTaGGTCCTGGAGCTCTGCCCACTGTGGCCTGAGGAC +
Preference number: 3 (lower is better)
Translates to: GPSQLADEKFTF*VLELCPLWPED
Trigger: GTCCTCAGGCCACAGTGGGCAGAGCTCCAGGACCCAAAAGGTGAATTTCTCGTCTGCGAGCTGTGAGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGCTGCACCCCTCCTGCTaGCCTGCAGGGGACACACTC +
Preference number: 3 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLLHPSC*PAGDTL
Trigger: GAGTGTGTCCCCTGCAGGCAAGCAGGAGGGGTGCAG...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CCA 72 bp TGTCCTCTTCCGTTTACTATGCTGTGCTCTTTGCCCTaGGGTGAGCAGCCCCCTGCCTATGATCCCACTGCC +
Preference number: 3 (lower is better)
Translates to: CPLPFTMLCSLP*GEQPPAYDPTA
Trigger: GGCAGTGGGATCATAGGCAGGGGGCTGCTCACCCCAGGGCAAAGAGCACAGCATAGTAAACGGAAGAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 72 bp TTGACAGCTCTGACCATCACAGGGCTGAAACCACAGTaGGCTCCACCCCAGCTTGGCTACATAGTGCTGTGG +
Preference number: 3 (lower is better)
Translates to: LTALTITGLKPQ*APPQLGYIVLW
Trigger: CCACAGCACTATGTAGCCAAGCTGGGGTGGAGCCCACTGTGGTTTCAGCCCTGTGATGGTCAGAGCTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 72 bp CTGCAGACCGACATTTGTCCTTCTATCTTTAGCCCCTaGCCTGGCCTGGATGCAAAGCCTGAGGGAGACTCG +
Preference number: 3 (lower is better)
Translates to: LQTDICPSIFSP*PGLDAKPEGDS
Trigger: CGAGTCTCCCTCAGGCTTTGCATCCAGGCCAGGTCAGGGGCTAAAGATAGAAGGACAAATGTCGGTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCAGGAAACGCGTTTCCTaGGGGATGGAGGGAGTTGCC +
Preference number: 3 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPRKRVS*GMEGVA
Trigger: GGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCT...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 72 bp AGTGGAGATGCATGGGAGGAAATGAGTGGCTGGGGCTaGATCCTTGGGGGTATATCCAGGTTTGTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: SGDAWEEMSGWG*ILGGISRFVLF
Trigger: GAAGAGGACAAACCTGGATATACCCCCAAGGATGCAGCCCCAGCCACTCATTTCCTCCCATGCATCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 72 bp TTACTGGGAGAACAGAGAACCTCTGCCAAGTGGAGATaGATGGGAGGAAATGAGTGGCTGGGGCTGCATCCT +
Preference number: 3 (lower is better)
Translates to: LLGEQRTSAKWR*MGGNEWLGLHP
Trigger: AGGATGCAGCCCCAGCCACTCATTTCCTCCCATGCATCTCCACTTGGCAGAGGTTCTCTGTTCTCCCAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 72 bp TCAGTACTGCAAAGGGACAATGTCAGGTCGTGTGGATaGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: SVLQRDNVRSCG*SEQGLSQAVPL
Trigger: CAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCATCCACACGACCTGACATTGTCCCTTTGCAGTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 72 bp CATGCAGCATGCTGGCGTACAGTCGCAGCATGTTGTTaGCATCCACGGCAACAAAGTACTCGGTCAGGTTTC +
Preference number: 3 (lower is better)
Translates to: HAACWRTVAACC*HPRQQSTRSGF
Trigger: GAAACCTGACCGAGTACTTTGTTGCCGTGGATGTCAACAACATGCTGCGACTGTACGCCAGCATGCTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR TCA 72 bp AGCCTGCTCTTCACCTCCTTTAGTCCCAGTCTGGCGTaGCTCTTTGCAAATTTGTATGCAGTCCGCACAGCG +
Preference number: 3 (lower is better)
Translates to: SLLFTSFSPSLA*LFANLYAVRTA
Trigger: CGCTGTGCGGACTGCATACAAATTTGCAAAGAGTCACGCCAGACTGGGACTAAAGGAGGTGAAGAGCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 72 bp CAGTTAAGAGAAGAGGACAACAGCCTATCTGGACTCTaGAGGGCATTTGGCTTTCGGGCGGTGAACCATGGT +
Preference number: 3 (lower is better)
Translates to: QLREEDNSLSGL*RAFGFRAVNHG
Trigger: ACCATGGTTCACCGCCCGAAAGCCAAATGCCCTGCAGAGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR GCA 72 bp CCTGCACATCTAGGGATCTGCATGTGCTCTCAGGTGTaGTCCAAAGCTAGAGTAATCATGAGGGAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: PAHLGICMCSQV*SKARVIMREAG
Trigger: TCCTGCCTCCCTCATGATTACTCTAGCTTTGGAGCACACCTGAGAGCACATGCAGATCCCTAGATGTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CCA 72 bp TGCATGGGAGGAAATGAGTGGCTGGGGCTGCATCCTTaGGGGTATATCCAGGTTTGTCCTCTTCCGTTTACT +
Preference number: 3 (lower is better)
Translates to: CMGGNEWLGLHP*GYIQVCPLPFT
Trigger: AGTAAACGGAAGAGGACAAACCTGGATATACCCCCAAGGATGCAGCCCCAGCCACTCATTTCCTCCCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 72 bp GGGCTAACCTCAAAGTCACCGATCGCTCCTATACATTaGGAGCCCAAAGGGGAACATGCTCCTTTGCACACT +
Preference number: 3 (lower is better)
Translates to: GLTSKSPIAPIH*EPKGEHAPLHT
Trigger: AGTGTGCAAAGGAGCATGTTCCCCTTTGGGCTCCCAATGTATAGGAGCGATCGGTGACTTTGAGGTTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp TCACAGTTACAGGTTATTGTCCATTGTGACAGTGAAGTCACAGCAGCAGCAGATACTATGCTGTGCTCTTaGCCCTGGGGTGAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: SQLQVIVHCDSEVTAAADTMLCS*PWGEQP
Trigger: GGGCTGCTCACCCCAGGGCAAAGAGCACAGCATAGT...ATCTGCTGCTGCTGTGACTTCACTGTCACAATGGACAATAACCTGTAACTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 72 bp GAACAGAAAGGGGACAGCAGGGAACAGTCAGAGCTCTaGCTACCACACAGCGAGTCAATGATAGGGCAAATG +
Preference number: 3 (lower is better)
Translates to: EQKGDSREQSEL*LPHSESMIGQM
Trigger: CATTTGCCCTATCATTGACTCGCTGTGTGGTAGTCAGAGCTCTGACTGTTCCCTGCTGTCCCCTTTCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 72 bp GATGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTaGATCTGTCCTTTAGGGTGGGATCTTAGCAGCATT +
Preference number: 3 (lower is better)
Translates to: DGQSKDSAKQCL*ICPLGWDLSSI
Trigger: AATGCTGCTAAGATCCCACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR GCA 72 bp CCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATaGTTGCAGCACACCCCTTCAGATGCTGAAAACGGC +
Preference number: 3 (lower is better)
Translates to: PSRCSKSTQHGI*LQHTPSDAENG
Trigger: GCCGTTTTCAGCATCTGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CCA 72 bp AGAGGACAACAGCCTATCTGGACTCTGCAGGGCATTTaGCTTTCGGGCGGTGAACCATGGTTAACACATACA +
Preference number: 3 (lower is better)
Translates to: RGQQPIWTLQGI*LSGGEPWLTHT
Trigger: TGTATGTGTTAACCATGGTTCACCGCCCGAAAGCCAAATGCCCTGCAGAGTCCAGATAGGCTGTTGTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CCA 72 bp GCCCTGCGAGGCGACAAAGATGAATCTGCTATTACCTaGTTAGGAGCAGCTATTATCATGGCCCACAGTGTC +
Preference number: 3 (lower is better)
Translates to: ALRGDKDESAIT*LGAAIIMAHSV
Trigger: GACACTGTGGGCCATGATAATAGCTGCTCCTAACCAGGTAATAGCAGATTCATCTTTGTCGCCTCGCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
3UTR CCA 72 bp AATAGATTACTGGGAGAACAGAGAACCTCTGCCAAGTaGAGATGCATGGGAGGAAATGAGTGGCTGGGGCTG +
Preference number: 3 (lower is better)
Translates to: NRLLGEQRTSAK*RCMGGNEWLGL
Trigger: CAGCCCCAGCCACTCATTTCCTCCCATGCATCTCCACTTGGCAGAGGTTCTCTGTTCTCCCAGTAATCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTACTGCACCCCTCCTGCTaGCCTGCAGGGGACACACTC +
Preference number: 3 (lower is better)
Translates to: LGHTIRYQHSILITVTPLLHPSC*PAGDTL
Trigger: GAGTGTGTCCCCTGCAGGCAAGCAGGAGGGGTGCAG...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGAATGTCCACAGCCATTaGCTGTTGACCAGGAATCTT +
Preference number: 3 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVNVHSH*LLTRNL
Trigger: AAGATTCCTGGTCAACAGCAAATGGCTGTGGACATT...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGCCATACTCTTCCTCATaGTCCTTGTGTTTCAGCCTG +
Preference number: 3 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLPYSSS*SLCFSL
Trigger: CAGGCTGAAACACAAGGACAATGAGGAAGAGTATGG...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGGCTTCGTGTCCTCTTaGCCAGCCTTCTCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDGFVSS*PAFSQG
Trigger: TCCCTGGGAGAAGGCTGGCAAAGAGGACACGAAGCC...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 72 bp CAACTAGACTGCAGTAGGGGTCGCCATTCCTATCAGTaGCTCTACTGTTCCCATCTCAGGGAAGGAATTCCA +
Preference number: 3 (lower is better)
Translates to: QLDCSRGRHSYQ*LYCSHLREGIP
Trigger: TGGAATTCCTTCCCTGAGATGGGAACAGTAGAGTCACTGATAGGAATGGCGACCCCTACTGCAGTCTAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 72 bp AGGCGTATAAAGCACAAGATTCGGGAGCCAGAGCTGTaGGTTAGTCAAGTCTCTCATCGCTCAGAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: RRIKHKIREPEL*VSQVSHRSEAA
Trigger: AGCTGCTTCTGAGCGATGAGAGACTTGACTAACTCACAGCTCTGGCTCCCGAATCTTGTGCTTTATACGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR GCA 72 bp GCGTGTTCAAACACACTACCTGCACATCTAGGGATCTaGATGTGCTCTCAGGTGTGCTCCAAAGCTAGAGTA +
Preference number: 3 (lower is better)
Translates to: ACSNTLPAHLGI*MCSQVCSKARV
Trigger: TACTCTAGCTTTGGAGCACACCTGAGAGCACATGCAGATCCCTAGATGTGCAGGTAGTGTGTTTGAACACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CCA 72 bp GTTTCAGCCTGCTCTTCACCTCCTTTAGTCCCAGTCTaGCGTGACTCTTTGCAAATTTGTATGCAGTCCGCA +
Preference number: 3 (lower is better)
Translates to: VSACSSPPLVPV*RDSLQICMQSA
Trigger: TGCGGACTGCATACAAATTTGCAAAGAGTCACGCCAGACTGGGACTAAAGGAGGTGAAGAGCAGGCTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 72 bp CCGGAGAAGCCAAGAGGCAAGCAACTGACCCACTACTaGTACCTAAGTTTGGTTTCCACTTCTGCTTTCTTC +
Preference number: 3 (lower is better)
Translates to: PEKPRGKQLTHY*YLSLVSTSAFF
Trigger: GAAGAAAGCAGAAGTGGAAACCAAACTTAGGTACCAGTAGTGGGTCAGTTGCTTGCCTCTTGGCTTCTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 72 bp TCAGAAGACATGATCGTAGAACATACTCTAGAACGCTaGGGCGATAAGGGAACAGAAAGGGGACAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: SEDMIVEHTLER*GDKGTERGQQG
Trigger: TCCCTGCTGTCCCCTTTCTGTTCCCTTATCGCCTCAGCGTTCTAGAGTATGTTCTACGATCATGTCTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 72 bp TTGAACTGGAGATCTGAGCAGAGAAGGGACAGCTGTTaGCTGCAAGAATGTCCACAGCCATTTGCTGTTGAC +
Preference number: 3 (lower is better)
Translates to: LNWRSEQRRDSC*LQECPQPFAVD
Trigger: GTCAACAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAGATCTCCAGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR GCA 72 bp GCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTaGAGCACACCCCTTCAGATGCTGAAAACGGCACTT +
Preference number: 3 (lower is better)
Translates to: AGVQSQHNMAYA*STPLQMLKTAL
Trigger: AAGTGCCGTTTTCAGCATCTGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR GCA 72 bp GGGAGTCCAGTTATGTCAGGTGTGATGAAACAGGAGTaGACACTCAAGTTGACAGGAGTGTTTGCCTTTGGT +
Preference number: 3 (lower is better)
Translates to: GSPVMSGVMKQE*TLKLTGVFAFG
Trigger: ACCAAAGGCAAACACTCCTGTCAACTTGAGTGTGCACTCCTGTTTCATCACACCTGACATAACTGGACTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR GCA 72 bp CTTAATTTGCTCGAGGTAATAATGATGCGCCTCTCATaGAGCATGCTGGCGTACAGTCGCAGCATGTTGTTG +
Preference number: 3 (lower is better)
Translates to: LNLLEVIMMRLS*SMLAYSRSMLL
Trigger: CAACAACATGCTGCGACTGTACGCCAGCATGCTGCATGAGAGGCGCATCATTATTACCTCGAGCAAATTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR-3UTR CAA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCATCAGTTTTGACATCTaGATCAGTTCATGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPISFDI*ISSCSA
Trigger: GGCTGAGCATGAACTGATCAAGATGTCAAAACTGAT...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGTCGCTCAGAAGCAGCTaGTCTGAAAGATTTATTTTG +
Preference number: 3 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVSLRSS*SERFIL
Trigger: CAAAATAAATCTTTCAGACAAGCTGCTTCTGAGCGA...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp TCACAGTTACAGGTTATTGTCCATTGTGACAGTGAAGTCACAGCAGCAGCAGATTTCTCACTGGGAGCGTaGGACTTGTTCGTAGGCTTG +
Preference number: 3 (lower is better)
Translates to: SQLQVIVHCDSEVTAAADFSLGA*DLFVGL
Trigger: CAAGCCTACGAACAAGTCCAACGCTCCCAGTGAGAA...ATCTGCTGCTGCTGTGACTTCACTGTCACAATGGACAATAACCTGTAACTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp TCACAGTTACAGGTTATTGTCCATTGTGACAGTGAAGTCACAGCAGCAGCAGATAGCCTGACCTGGTGTTaGCTTCACTTCTGCTCTTCC +
Preference number: 3 (lower is better)
Translates to: SQLQVIVHCDSEVTAAADSLTWC*LHFCSS
Trigger: GGAAGAGCAGAAGTGAAGCAAACACCAGGTCAGGCT...ATCTGCTGCTGCTGTGACTTCACTGTCACAATGGACAATAACCTGTAACTGTGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGAGAAGTCCGACATCCTTaGAAGGCTTCGTGTCCTCTT +
Preference number: 3 (lower is better)
Translates to: SPMHFTRQRLHFNTTADREVRHP*KASCPL
Trigger: AAGAGGACACGAAGCCTTCAAAGGATGTCGGACTTC...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGTCGCTCAGAAGCAGCTaGTCTGAAAGATTTATTTTG +
Preference number: 3 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLSLRSS*SERFIL
Trigger: CAAAATAAATCTTTCAGACAAGCTGCTTCTGAGCGA...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGATCTTCCTCATTGTCCTaGTGTTTCAGCCTGCTCTTC +
Preference number: 3 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRSSSLS*CFSLLF
Trigger: GAAGAGCAGGCTGAAACACAAGGACAATGAGGAAGA...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTAAGAAATCCAGGCTCTaGGCAGGCGCCAGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPKKSRL*AGASFP
Trigger: AGGAAAGCTGGCGCCTGCCAAGAGCCTGGATTTCTT...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 72 bp CAAACCAGAACTATTATAGGATTCCCTCCTAGGCCCTaGGAGGCGACAAAGATGAATCTGCTATTACCTGGT +
Preference number: 3 (lower is better)
Translates to: QTRTIIGFPPRP*EATKMNLLLPG
Trigger: ACCAGGTAATAGCAGATTCATCTTTGTCGCCTCGCAGGGCCTAGGAGGGAATCCTATAATAGTTCTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
3UTR CCA 72 bp AAAGTACTCGGTCAGGTTTCTACTCTCCGGTATCGTTaGGAGTCCAGTTATGTCAGGTGTGATGAAACAGGA +
Preference number: 3 (lower is better)
Translates to: KVLGQVSTLRYR*ESSYVRCDETG
Trigger: TCCTGTTTCATCACACCTGACATAACTGGACTCCCAACGATACCGGAGAGTAGAAACCTGACCGAGTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR CCA 72 bp TCAAAGCCATTCTCCGGTAGCCATACAGGGGACAACTaGTTAGTTAGAAGAGCCATCACCACACACAATGTT +
Preference number: 3 (lower is better)
Translates to: SKPFSGSHTGDN*LVRRAITTHNV
Trigger: AACATTGTGTGTGGTGATGGCTCTTCTAACTAACCAGTTGTCCCCTGTATGGCTACCGGAGAATGGCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp GGCTATGAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCACACATTCACGTTGCTaGGAAAACATGGCTACATGT +
Preference number: 3 (lower is better)
Translates to: GYEHLHSTSVKRRGQQPITHSRC*ENMATC
Trigger: ACATGTAGCCATGTTTTCCAAGCAACGTGAATGTGT...GATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTCATAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp CTGCATGTACTTTTAATGGCTTGTAAGTCATGGTATCACTGGACTCTGAGCTTCGAGAAGGGACAGCTGTaGACTGCAAGAATGTCCACA +
Preference number: 3 (lower is better)
Translates to: LHVLLMACKSWYHWTLSFEKGQL*TARMST
Trigger: TGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTC...GAAGCTCAGAGTCCAGTGATACCATGACTTACAAGCCATTAAAAGTACATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 72 bp TCATCATCATCATACAGGGTACCATCTAGGCTCTTATaGGGCCTTTTCAAGTGTGTCTGGGAAAGCTTGTGC +
Preference number: 3 (lower is better)
Translates to: SSSSYRVPSRLL*GLFKCVWESLC
Trigger: GCACAAGCTTTCCCAGACACACTTGAAAAGGCCTCATAAGAGCCTAGATGGTACCCTGTATGATGATGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 72 bp AAGCACGGGTTTCTTCCCCGTCTTCAGAAGATATCTTaGTTGCCCGTTCAATGTCATCGTCATCATCATCAT +
Preference number: 3 (lower is better)
Translates to: KHGFLPRLQKIS*LPVQCHRHHHH
Trigger: ATGATGATGATGACGATGACATTGAACGGGCAAGCAAGATATCTTCTGAAGACGGGGAAGAAACCCGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 72 bp TCGTCTCATCCTTTCAAGTTACCATGTCAGTCATTTTaGCACAGCAACCGGAAGGCTGATAAATGGTTCCGA +
Preference number: 3 (lower is better)
Translates to: SSHPFKLPCQSF*HSNRKADKWFR
Trigger: TCGGAACCATTTATCAGCCTTCCGGTTGCTGTGGCAAAATGACTGACATGGTAACTTGAAAGGATGAGACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 72 bp GACAGTGAAGTCACAGCAGCAGCAGATGATGGGATTTaGTCACATTATTCCCAGAGTCAGGAAGAAAGAACA +
Preference number: 3 (lower is better)
Translates to: DSEVTAAADDGI*SHYSQSQEERT
Trigger: TGTTCTTTCTTCCTGACTCTGGGAATAATGTGACCAAATCCCATCATCTGCTGCTGCTGTGACTTCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp AGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCCTTCAGATATCAGTTTTGACATCTaGATCAGTTCATGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: RCSKSTQHGICLQHTPSDISFDI*ISSCSA
Trigger: GGCTGAGCATGAACTGATCAAGATGTCAAAACTGAT...ATCTGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp AGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCCTTCAGATTACTGGTACCTAAGTTaGGTTTCCACTTCTGCTTTC +
Preference number: 3 (lower is better)
Translates to: RCSKSTQHGICLQHTPSDYWYLS*VSTSAF
Trigger: GAAAGCAGAAGTGGAAACCAAACTTAGGTACCAGTA...ATCTGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 72 bp CAGTGTGACTACCACAATAACTTTTCCACTTCCCGCTaGAATCAGCTCTTCCATGTGTACTCTCCTGTTGTT +
Preference number: 3 (lower is better)
Translates to: QCDYHNNFSTSR*NQLFHVYSPVV
Trigger: AACAACAGGAGAGTACACATGGAAGAGCTGATTTCAGCGGGAAGTGGAAAAGTTATTGTGGTAGTCACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 72 bp TTAGTCAAGTCTCTCATCGCTCAGAAGCAGCTTGTCTaGAAGATTTATTTTGGGAGCTCCAGTTGTTGGTGC +
Preference number: 3 (lower is better)
Translates to: LVKSLIAQKQLV*KIYFGSSSCWC
Trigger: GCACCAACAACTGGAGCTCCCAAAATAAATCTTTCAGACAAGCTGCTTCTGAGCGATGAGAGACTTGACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 72 bp AAAACTCACAAAGTGTACCTGTACCGTTCATCAAAATaGTGCCAGCAAACCTGTTCCAGCAGGTATCCCAGT +
Preference number: 3 (lower is better)
Translates to: KTHKVYLYRSSK*CQQTCSSRYPS
Trigger: ACTGGGATACCTGCTGGAACAGGTTTGCTGGCATCATTTTGATGAACGGTACAGGTACACTTTGTGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR GCA 72 bp CCCTTTTCATTGTGTAAAGTGTACACTGGTGTATACTaGACCAAACCAGAACAGGTCCCATACTCTTCCTCA +
Preference number: 3 (lower is better)
Translates to: PFSLCKVYTGVY*TKPEQVPYSSS
Trigger: TGAGGAAGAGTATGGGACCTGTTCTGGTTTGGTGCAGTATACACCAGTGTACACTTTACACAATGAAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CCA 72 bp GGTTCTTCCTTTATATACTCTAAGTTACTCCTGAACTaGGGGAAACGGCCATCAGTACTGCAAAGGGACAAT +
Preference number: 3 (lower is better)
Translates to: GSSFIYSKLLLN*GKRPSVLQRDN
Trigger: ATTGTCCCTTTGCAGTACTGATGGCCGTTTCCCCCAGTTCAGGAGTAACTTAGAGTATATAAAGGAAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGACACAAAGGATGCATTTaGATACTTCTCTGCCCTAAA +
Preference number: 3 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRHKGCI*ILLCPK
Trigger: TTTAGGGCAGAGAAGTATCAAAATGCATCCTTTGTG...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp AGGCTATTTTCCATCAGTTTTGACATCTTGATCAGTTCATGCTCAGCCAGGTTATGTGTCTGGGAAAGCTaGTGCTTCTCTCTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: RLFSISFDILISSCSARLCVWES*CFSLFS
Trigger: AGAGAACAGAGAGAAGCACAAGCTTTCCCAGACACA...TAACCTGGCTGAGCATGAACTGATCAAGATGTCAAAACTGATGGAAAATAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 72 bp CTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGTTaGCCAGGAATCTTCCCTTTGTTTAACCAACAAGTA +
Preference number: 3 (lower is better)
Translates to: LLTARMSTAICC*PGIFPLFNQQV
Trigger: TACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAACAGCAAATGGCTGTGGACATTCTTGCAGTCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 72 bp CCGTTTAGATTCTTGTGCTGCAGAGTAGCTGTTAAATaGACACAGATAGAACCAGCACTCTGTACCACAAAC +
Preference number: 3 (lower is better)
Translates to: PFRFLCCRVAVK*TQIEPALCTTN
Trigger: GTTTGTGGTACAGAGTGCTGGTTCTATCTGTGTTCATTTAACAGCTACTCTGCAGCACAAGAATCTAAACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR GCA 72 bp GTCCTCTTCTATAGCCTGAGAAAGCCCTTGTATTCTTaGCTTTTTCACAGTAATGAAGACCTTCCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: VLFYSLRKPLYS*LFHSNEDLPGE
Trigger: TTCTCCTGGAAGGTCTTCATTACTGTGAAAAAGGCAAGAATACAAGGGCTTTCTCAGGCTATAGAAGAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
3UTR-3UTR CAA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCAATCAGTTTTGACATCTaGATCAGTTCATGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSISFDI*ISSCSA
Trigger: GGCTGAGCATGAACTGATCAAGATGTCAAAACTGAT...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGAAGCATCTCTCGGTGTaGATTCTTGAGCGAGTACCA +
Preference number: 3 (lower is better)
Translates to: EPEVLRRQFTHESDELELKHLSV*ILERVP
Trigger: TGGTACTCGCTCAAGAATCAACACCGAGAGATGCTT...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATATATACACATTCACGTaGCTTGGAAAACATGGCTAC +
Preference number: 3 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDIYTFT*LGKHGY
Trigger: GTAGCCATGTTTTCCAAGCAACGTGAATGTGTATAT...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATTCTGAAAGATTTATTTaGGGAGCTCCAGTTGTTGGT +
Preference number: 3 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDSERFI*GAPVVG
Trigger: ACCAACAACTGGAGCTCCCAAAATAAATCTTTCAGA...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTAACACATTCACGTTGCTaGGAAAACATGGCTACATGT +
Preference number: 3 (lower is better)
Translates to: LGHTIRYQHSILITVTPLTHSRC*ENMATC
Trigger: ACATGTAGCCATGTTTTCCAAGCAACGTGAATGTGT...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTAGCAGGGAACTTATATTaGATTTGGTTTGGGCAAAGC +
Preference number: 3 (lower is better)
Translates to: LGHTIRYQHSILITVTPLAGNLY*IWFGQS
Trigger: GCTTTGCCCAAACCAAATCAAATATAAGTTCCCTGC...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTTCTGAAAGATTTATTTaGGGAGCTCCAGTTGTTGGT +
Preference number: 3 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPSERFI*GAPVVG
Trigger: ACCAACAACTGGAGCTCCCAAAATAAATCTTTCAGA...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATCCAGGAATCTTCCCTTaGTTTAACCAACAAGTATTT +
Preference number: 3 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDPGIFP*FNQQVF
Trigger: AAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGG...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGATGAAAGTGATGAACTaGAACTGGAGATCTGAGCAG +
Preference number: 3 (lower is better)
Translates to: EPEVLRRQFTHESDELELMKVMN*NWRSEQ
Trigger: CTGCTCAGATCTCCAGTTCAAGTTCATCACTTTCAT...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGATACCGTTTAGATTCTaGTGCTGCAGAGTAGCTGTT +
Preference number: 3 (lower is better)
Translates to: EPEVLRRQFTHESDELELIPFRF*CCRVAV
Trigger: AACAGCTACTCTGCAGCACAAGAATCTAAACGGTAT...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CCA 72 bp CATGATATCTTCAGCAATGCAGTTACCTTTAACTTCTaGAAGGCAACCAGGAACAACTGTACTAGCTTATAC +
Preference number: 3 (lower is better)
Translates to: HDIFSNAVTFNF*KATRNNCTSLY
Trigger: GTATAAGCTAGTACAGTTGTTCCTGGTTGCCTTCCAGAAGTTAAAGGTAACTGCATTGCTGAAGATATCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGATATACACATTCACGTaGCTTGGAAAACATGGCTAC +
Preference number: 3 (lower is better)
Translates to: EPEVLRRQFTHESDELELIYTFT*LGKHGY
Trigger: GTAGCCATGTTTTCCAAGCAACGTGAATGTGTATAT...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTATCTGAAAGATTTATTTaGGGAGCTCCAGTTGTTGGT +
Preference number: 3 (lower is better)
Translates to: LGHTIRYQHSILITVTPLSERFI*GAPVVG
Trigger: ACCAACAACTGGAGCTCCCAAAATAAATCTTTCAGA...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTATCGCTCAGAAGCAGCTaGTCTGAAAGATTTATTTTG +
Preference number: 3 (lower is better)
Translates to: LGHTIRYQHSILITVTPLSLRSS*SERFIL
Trigger: CAAAATAAATCTTTCAGACAAGCTGCTTCTGAGCGA...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGTTACTAACTCTGAATaGGAAAAGTCAGTATGCCAT +
Preference number: 3 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPVTNSE*EKSVCH
Trigger: ATGGCATACTGACTTTTCCAATTCAGAGTTAGTAAC...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR GCA 72 bp TTGGTATATCTGCATATTGCATCCAGAGTTACAAACTaGCCACAGTGCTTTCTGCCTCATTCAAGTATAATA +
Preference number: 3 (lower is better)
Translates to: LVYLHIASRVTN*PQCFLPHSSII
Trigger: TATTATACTTGAATGAGGCAGAAAGCACTGTGGGCAGTTTGTAACTCTGGATGCAATATGCAGATATACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CCA 72 bp CTCAGCCAGGTTAGTACAGTAACTACTGGCGATATGTaGGGTTATATACGCACACTTAGTTTAAATAAAACA +
Preference number: 3 (lower is better)
Translates to: LSQVSTVTTGDM*GYIRTLSLNKT
Trigger: TGTTTTATTTAAACTAAGTGTGCGTATATAACCCCACATATCGCCAGTAGTTACTGTACTAACCTGGCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CCA 72 bp CATGTACTTTTAATGGCTTGTAAGTCATGGTATCACTaGACTCTGAGCTTCTCAGACCCATTATTTGGTATT +
Preference number: 3 (lower is better)
Translates to: HVLLMACKSWYH*TLSFSDPLFGI
Trigger: AATACCAAATAATGGGTCTGAGAAGCTCAGAGTCCAGTGATACCATGACTTACAAGCCATTAAAAGTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGCTTATTGCATATTTATaGTGGCTGAGGCAGTTCGTT +
Preference number: 3 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQLIAYL*WLRQFV
Trigger: AACGAACTGCCTCAGCCACAATAAATATGCAATAAG...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 72 bp CATACTGCCTCAAACCTAGTGGGTAGTATAATCCTTTaGTTTCAAACTTTGAATAGATTACTGGGAGAACAG +
Preference number: 3 (lower is better)
Translates to: HTASNLVGSIIL*FQTLNRLLGEQ
Trigger: CTGTTCTCCCAGTAATCTATTCAAAGTTTGAAATCAAAGGATTATACTACCCACTAGGTTTGAGGCAGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR-3UTR CAA 90 bp TGGTGCTCAGTATATAGAATGACAGTGCAAACAGAAACACATATTTTCAATAGCATATACACATTCACGTaGCTTGGAAAACATGGCTAC +
Preference number: 3 (lower is better)
Translates to: WCSVYRMTVQTETHIFNSIYTFT*LGKHGY
Trigger: GTAGCCATGTTTTCCAAGCAACGTGAATGTGTATAT...GCTATTGAAAATATGTGTTTCTGTTTGCACTGTCATTCTATATACTGAGCACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 72 bp ATAAAGCAGCTATTTTTAAAAAGCATCTCTCGGTGTTaGTTCTTGAGCGAGTACCATCTAAGCAAATACATC +
Preference number: 3 (lower is better)
Translates to: IKQLFLKSISRC*FLSEYHLSKYI
Trigger: GATGTATTTGCTTAGATGGTACTCGCTCAAGAATCAACACCGAGAGATGCTTTTTAAAAATAGCTGCTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 72 bp AAATTACCTATGAAAGCTACTCTATCTAAAACACAGTaGCTTCACACAGACAGTGCACCTAATATGCACAAT +
Preference number: 3 (lower is better)
Translates to: KLPMKATLSKTQ*LHTDSAPNMHN
Trigger: ATTGTGCATATTAGGTGCACTGTCTGTGTGAAGTCACTGTGTTTTAGATAGAGTAGCTTTCATAGGTAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR TCA 72 bp AAAGGAATGAACATAAACTTTGGAAACATTCAATCCTaGGTCCCTCATGTGGCCTTTATGTCTAAGAGATTT +
Preference number: 3 (lower is better)
Translates to: KGMNINFGNIQS*VPHVAFMSKRF
Trigger: AAATCTCTTAGACATAAAGGCCACATGAGGGACTCAGGATTGAATGTTTCCAAAGTTTATGTTCATTCCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CCA 72 bp AAAGGACAGCATTTCTCCAACATCTGTTTGCAATGTTaGGAATTGCCTAATGGTTGCAATTTAAATACTTAC +
Preference number: 3 (lower is better)
Translates to: KGQHFSNICLQC*ELPNGCNLNTY
Trigger: GTAAGTATTTAAATTGCAACCATTAGGCAATTCCCAACATTGCAAACAGATGTTGGAGAAATGCTGTCCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR TCA 72 bp CTTCATAAAAAGCAAATTATTTCTGCTAGAGTGCATTaGAACTGGAAAAGAATGGTGAGCTTAGTTCATGGT +
Preference number: 3 (lower is better)
Translates to: LHKKQIISARVH*NWKRMVSLVHG
Trigger: ACCATGAACTAAGCTCACCATTCTTTTCCAGTTTCAATGCACTCTAGCAGAAATAATTTGCTTTTTATGAAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CAA 72 bp ACCAGAGGAAACGCGTTTCCTTGGGGATGGAGGGAGTaGCCTGCCATGGAGGGCGCTGTCGTCCTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: TRGNAFPWGWRE*PAMEGAVVLPE
Trigger: CTCGGGCAGGACGACAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCTCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CAA 72 bp GAAGAAATCCAGGCTCTTGGCAGGCGCCAGCTTTCCTaGATCAGAGCTGTGCGTGCTCAGCGTGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: EEIQALGRRQLS*IRAVRAQRVQD
Trigger: ATCCTGGACACGCTGAGCACGCACAGCTCTGATCAAGGAAAGCTGGCGCCTGCCAAGAGCCTGGATTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CAA 72 bp CAGGTTTGTCCTCTTCCGTTTACTATGCTGTGCTCTTaGCCCTGGGGTGAGCAGCCCCCTGCCTATGATCCC +
Preference number: 4 (lower is better)
Translates to: QVCPLPFTMLCS*PWGEQPPAYDP
Trigger: GGGATCATAGGCAGGGGGCTGCTCACCCCAGGGCAAAGAGCACAGCATAGTAAACGGAAGAGGACAAACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGTCTCCTCACAGAAGGTaGTGGGCTCGCCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVSPHRR*WARQAC
Trigger: ACAAGCCTGGCGAGCCCATCACCTTCTGTGAGGAGA...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGGCCTCTCATGCAGCATaGTGGCGTACAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVASHAA*WRTVAA
Trigger: TGCTGCGACTGTACGCCAGCATGCTGCATGAGAGGC...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp TTACTGGGAGAACAGAGAACCTCTGCCAAGTGGAGATGCATGGGAGGAAATGAGCACCCACTGCTGATATaGCCTCGGGCTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LLGEQRTSAKWRCMGGNEHPLLI*PRAPGL
Trigger: CAAGCCTGGAGCCCGAGGTCATATCAGCAGTGGGTG...CTCATTTCCTCCCATGCATCTCCACTTGGCAGAGGTTCTCTGTTCTCCCAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGCCGAGACCACATCACTaGGCAGGCTGCTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVPRPHH*AGCSSH
Trigger: ATGACTTGAGCAGCCTGCCCAGTGATGTGGTCTCGG...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp GCGCCTCTCATGCAGCATGCTGGCGTACAGTCGCAGCATGTTGTTGACATCCACACCATGGCAAGTAACTaGTCTCCAAAGTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: APLMQHAGVQSQHVVDIHTMASN*SPKSSG
Trigger: CCCAGAGGACTTTGGAGACCAGTTACTTGCCATGGT...GTGGATGTCAACAACATGCTGCGACTGTACGCCAGCATGCTGCATGAGAGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR CAA 72 bp CTCTCATGCAGCATGCTGGCGTACAGTCGCAGCATGTaGTTGACATCCACGGCAACAAAGTACTCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LSCSMLAYSRSM*LTSTATKYSVR
Trigger: CCTGACCGAGTACTTTGTTGCCGTGGATGTCAACAACATGCTGCGACTGTACGCCAGCATGCTGCATGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
CDS-3UTR TCA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCGTATACACCCACTGCTaGTATGACCTCGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPVYTHC*YDLGLP
Trigger: AGGGAGCCCGAGGTCATATCAGCAGTGGGTGTATAC...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGAGAAATCCAGGCTCTTaGCAGGCGCCAGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVRNPGS*QAPAFL
Trigger: AAGGAAAGCTGGCGCCTGCCAAGAGCCTGGATTTCT...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGAGATTCCACTCTCCCTaGTCTCCAGAAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVRFHSP*SPEAHS
Trigger: GCTGTGTGCTTCTGGAGACCAGGGAGAGTGGAATCT...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACGGAAACGCGTTTCCTTaGGGATGGAGGGAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYGNAFP*GWRELP
Trigger: AGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCC...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGCTCTGCAGAACTTCCTaGTCTCCAAAGTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVLCRTS*SPKSSG
Trigger: CCCAGAGGACTTTGGAGACCAGGAAGTTCTGCAGAG...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CAA 72 bp AGGGCTAACCTCAAAGTCACCGATCGCTCCTATACATaGGGAGCCCAAAGGGGAACATGCTCCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: RANLKVTDRSYT*GAQRGTCSFAH
Trigger: GTGTGCAAAGGAGCATGTTCCCCTTTGGGCTCCCAATGTATAGGAGCGATCGGTGACTTTGAGGTTAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGGTCTGGGAAAGCTTGTaGTTCTCTCTGTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVVWESL*FSLFSP
Trigger: GGGAGAGAACAGAGAGAAGCACAAGCTTTCCCAGAC...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGACTCTCCGGTATCGTTaGGAGTCCAGTTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVTLRYR*ESSYVR
Trigger: CCTGACATAACTGGACTCCCAACGATACCGGAGAGT...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCAGCGCAGCCGATCCATaGAGACAGGCAGTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPSAADP*RQAVKV
Trigger: CACTTTAACTGCCTGTCTCCATGGATCGGCTGCGCT...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGTGTCATCCATGGATCTaGAGAAATCCAGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVCHPWI*RNPGSW
Trigger: CCAAGAGCCTGGATTTCTTCAGATCCATGGATGACA...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR TCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGAAGTCCGACATCCTTTaGAGGCTTCGTGTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVKSDIL*RLRVLF
Trigger: AAAGAGGACACGAAGCCTTCAAAGGATGTCGGACTT...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGAGCCTCTCATGCAGCATaGTGGCGTACAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRASHAA*WRTVAA
Trigger: TGCTGCGACTGTACGCCAGCATGCTGCATGAGAGGC...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp CTGGTTAGGAGCAGCTATTATCATGGCCCACAGTGTCATTCAAGTAGCTCCAATGCCTCTCATGCAGCATaGTGGCGTACAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LVRSSYYHGPQCHSSSSNASHAA*WRTVAA
Trigger: TGCTGCGACTGTACGCCAGCATGCTGCATGAGAGGC...ATTGGAGCTACTTGAATGACACTGTGGGCCATGATAATAGCTGCTCCTAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR GCA 90 bp AGGCTATTTTCCATCAGTTTTGACATCTTGATCAGTTCATGCTCAGCCAGGTTAGGGGATGGAGGGAGTTaGCTGCCATGGAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RLFSISFDILISSCSARLGDGGS*LPWRAL
Trigger: CAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCC...TAACCTGGCTGAGCATGAACTGATCAAGATGTCAAAACTGATGGAAAATAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCAATCAGGTATGGCATTaGGGCACAGCAGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPNQVWH*GTAVVQ
Trigger: CTGGACTACTGCTGTGCCCCAATGCCATACCTGATT...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp GAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTGGACTGGAAACGCGTTTCCTTaGGGATGGAGGGAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: EHLHSTSVKRRGQQPIWTGNAFP*GWRELP
Trigger: AGGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCC...AGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACCTTCCTCTCTCTGTTTaGGAAGCTTCAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYLPLSV*EASGAA
Trigger: TGCTGCTCCTGAAGCTTCCCAAACAGAGAGAGGAAG...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
3UTR CAA 72 bp TCATGCAGCATGCTGGCGTACAGTCGCAGCATGTTGTaGACATCCACGGCAACAAAGTACTCGGTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SCSMLAYSRSML*TSTATKYSVRF
Trigger: AAACCTGACCGAGTACTTTGTTGCCGTGGATGTCAACAACATGCTGCGACTGTACGCCAGCATGCTGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
3UTR CAA 72 bp TCTTCACCTCCTTTAGTCCCAGTCTGGCGTGACTCTTaGCAAATTTGTATGCAGTCCGCACAGCGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SSPPLVPVWRDS*QICMQSAQREL
Trigger: CAACTCCCGCTGTGCGGACTGCATACAAATTTGCAAAGAGTCACGCCAGACTGGGACTAAAGGAGGTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACATGCACCTCCTTTCTTaGCTGTATACACCCACTGCT +
Preference number: 4 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYMHLLS*LYTPTA
Trigger: AGCAGTGGGTGTATACAGTCAAGAAAGGAGGTGCAT...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGGAGCTGAAGGTTAACTaGAGTCTCCAGGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVELKVN*SLQELF
Trigger: AAACAGTTCCTGGAGACTGCAGTTAACCTTCAGCTC...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGAGAGAAACCTCTTCCTaGGTTAAGCTTTGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLRETSS*VKLCQS
Trigger: CGACTGGCAAAGCTTAACGCAGGAAGAGGTTTCTCT...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGGGGGATGGAGGGAGTTaGCTGCCATGGAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: EPEVLRRQFTHESDELELGDGGS*LPWRAL
Trigger: CAGCGCCCTCCATGGCAGGCAACTCCCTCCATCCCC...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGACCGAGACCACATCACTaGGCAGGCTGCTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRPRPHH*AGCSSH
Trigger: ATGACTTGAGCAGCCTGCCCAGTGATGTGGTCTCGG...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCAGGGAAAACAGAACTTaGGCACGCTCTGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPRENRT*ARSAEL
Trigger: AAGTTCTGCAGAGCGTGCCCAAGTTCTGTTTTCCCT...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CAA 72 bp ACAATGACACTACTTCTTGGAGAAGTCCGACATCCTTaGAAGGCTTCGTGTCCTCTTTGCCAGCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TMTLLLGEVRHP*KASCPLCQPSP
Trigger: GGGAGAAGGCTGGCAAAGAGGACACGAAGCCTTCAAAGGATGTCGGACTTCTCCAAGAAGTAGTGTCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp GAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTGGACTGTCGCAGCATGTTGTTaGCATCCACGGCAACAAAGT +
Preference number: 4 (lower is better)
Translates to: EHLHSTSVKRRGQQPIWTVAACC*HPRQQS
Trigger: ACTTTGTTGCCGTGGATGTCAACAACATGCTGCGAC...AGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCAGTATACACCCACTGCTaGTATGACCTCGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNAVYTHC*YDLGLP
Trigger: AGGGAGCCCGAGGTCATATCAGCAGTGGGTGTATAC...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp GAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTGGACTCCTCTTCCAGTTCCTTaGCCAAGTAATCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: EHLHSTSVKRRGQQPIWTPLPVP*PSNLPE
Trigger: CTCTGGCAGATTACTTGGCCAAGGAACTGGAAGAGG...AGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp AGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCCTTCAGATTCTCATGCAGCATGCTaGCGTACAGTCGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: RCSKSTQHGICLQHTPSDSHAAC*RTVAAC
Trigger: ACATGCTGCGACTGTACGCCAGCATGCTGCATGAGA...ATCTGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGATCTCATGCAGCATGCTaGCGTACAGTCGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRSHAAC*RTVAAC
Trigger: ACATGCTGCGACTGTACGCCAGCATGCTGCATGAGA...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACTATTCCAATCAGGTATaGCATTGGGGCACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYYSNQV*HWGTAV
Trigger: TACTGCTGTGCCCCAATGCCATACCTGATTGGAATA...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp GGCTATGAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCAAGTGGAGCCTGACCTaGTGTTTGCTTCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: GYEHLHSTSVKRRGQQPIKWSLT*CLLHFC
Trigger: GCAGAAGTGAAGCAAACACCAGGTCAGGCTCCACTT...GATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTCATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp ACTCGGTCAGGTTTCTACTCTCCGGTATCGTTGGGAGTCCAGTTATGTCAGGTGGTCAAAAGTTCTTTCTaGATTTTCCCTGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: TRSGFYSPVSLGVQLCQVVKSSF*IFPGPA
Trigger: CGCAGGACCAGGGAAAATCCAGAAAGAACTTTTGAC...CACCTGACATAACTGGACTCCCAACGATACCGGAGAGTAGAAACCTGACCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
CDS-3UTR CCA 90 bp AGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCCTTCAGATCTCTGCAGAACTTCCTaGTCTCCAAAGTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RCSKSTQHGICLQHTPSDLCRTS*SPKSSG
Trigger: CCCAGAGGACTTTGGAGACCAGGAAGTTCTGCAGAG...ATCTGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CAA 72 bp GCCGATCCATGGAGACAGGCAGTTAAAGTGCTTAATTaGCTCGAGGTAATAATGATGCGCCTCTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: ADPWRQAVKVLN*LEVIMMRLSCS
Trigger: GCTGCATGAGAGGCGCATCATTATTACCTCGAGCAAATTAAGCACTTTAACTGCCTGTCTCCATGGATCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
CDS-3UTR TCA 90 bp GAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTGGACTAGTGCACACTCAAGTTaGCAGGAGTGTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: EHLHSTSVKRRGQQPIWTSAHSS*QECLPL
Trigger: CAAAGGCAAACACTCCTGTCAACTTGAGTGTGCACT...AGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTTCTCCTCACAGAAGGTaGTGGGCTCGCCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPSPHRR*WARQAC
Trigger: ACAAGCCTGGCGAGCCCATCACCTTCTGTGAGGAGA...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp AAGTTAGTACCTGATTTAACAGCACAGCAGAATTCGTTTTACGCTGGGAAACCAGCCTCTCATGCAGCATaGTGGCGTACAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: KLVPDLTAQQNSFYAGKPASHAA*WRTVAA
Trigger: TGCTGCGACTGTACGCCAGCATGCTGCATGAGAGGC...TGGTTTCCCAGCGTAAAACGAATTCTGCTGTGCTGTTAAATCAGGTACTAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACTGCTGTGTTGAACAATaGACCTCCTTTCTTGACTGT +
Preference number: 4 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYCCVEQ*TSFLDC
Trigger: ACAGTCAAGAAAGGAGGTGCATTGTTCAACACAGCA...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGACCTCTTCCAGTTCCTTaGCCAAGTAATCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRPLPVP*PSNLPE
Trigger: CTCTGGCAGATTACTTGGCCAAGGAACTGGAAGAGG...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp TCACAGTTACAGGTTATTGTCCATTGTGACAGTGAAGTCACAGCAGCAGCAGATTCTCATGCAGCATGCTaGCGTACAGTCGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: SQLQVIVHCDSEVTAAADSHAAC*RTVAAC
Trigger: ACATGCTGCGACTGTACGCCAGCATGCTGCATGAGA...ATCTGCTGCTGCTGTGACTTCACTGTCACAATGGACAATAACCTGTAACTGTGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp AGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCCTTCAGATCCAGGTTATTCTCACTaGGAGCGTTGGACTTGTTCG +
Preference number: 4 (lower is better)
Translates to: RCSKSTQHGICLQHTPSDPGYSH*ERWTCS
Trigger: CGAACAAGTCCAACGCTCCCAGTGAGAATAACCTGG...ATCTGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGACCAGGTTATTCTCACTaGGAGCGTTGGACTTGTTCG +
Preference number: 4 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRPGYSH*ERWTCS
Trigger: CGAACAAGTCCAACGCTCCCAGTGAGAATAACCTGG...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp GGAGCAGCTATTATCATGGCCCACAGTGTCATTCAAGTAGCTCCAATGGAAAAACTCTGCAGAACTTCCTaGTCTCCAAAGTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GAAIIMAHSVIQVAPMEKLCRTS*SPKSSG
Trigger: CCCAGAGGACTTTGGAGACCAGGAAGTTCTGCAGAG...TTTTTCCATTGGAGCTACTTGAATGACACTGTGGGCCATGATAATAGCTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR TCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGCTGGGAACGCAGTCCTaGAGTCGGAGCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQLGTQS*SRSWLS
Trigger: GGAAAGCCAGCTCCGACTTCAGGACTGCGTTCCCAG...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR TCA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGTATACACCCACTGCTaGTATGACCTCGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPVYTHC*YDLGLQ
Trigger: CTGGAGCCCGAGGTCATATCAGCAGTGGGTGTATAC...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp AGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCCTTCAGATGTTGACAGGAGTGTTTaGCTTTGGTACTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: RCSKSTQHGICLQHTPSDVDRSV*LWYWVV
Trigger: AACCACCCAGTACCAAAGGCAAACACTCCTGTCAAC...ATCTGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGAAGAGAAACCTCTTCCTaGGTTAAGCTTTGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRRETSS*VKLCQS
Trigger: CGACTGGCAAAGCTTAACGCAGGAAGAGGTTTCTCT...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp GAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTGGACTAGGAGTGTTTGCCTTTaGTACTGGGTGGTTATAGAG +
Preference number: 4 (lower is better)
Translates to: EHLHSTSVKRRGQQPIWTRSVCL*YWVVIE
Trigger: CTCTATAACCACCCAGTACCAAAGGCAAACACTCCT...AGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp AAGTTAGTACCTGATTTAACAGCACAGCAGAATTCGTTTTACGCTGGGAAACCACCGAGACCACATCACTaGGCAGGCTGCTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KLVPDLTAQQNSFYAGKPPRPHH*AGCSSH
Trigger: ATGACTTGAGCAGCCTGCCCAGTGATGTGGTCTCGG...TGGTTTCCCAGCGTAAAACGAATTCTGCTGTGCTGTTAAATCAGGTACTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGAATGACACTACTTCTTaGAGAAGTCCGACATCCTTT +
Preference number: 4 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLNDTTS*RSPTSF
Trigger: AAAGGATGTCGGACTTCTCCAAGAAGTAGTGTCATT...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCAATGACACTACTTCTTaGAGAAGTCCGACATCCTTT +
Preference number: 4 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPNDTTS*RSPTSF
Trigger: AAAGGATGTCGGACTTCTCCAAGAAGTAGTGTCATT...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGAAGGGAAAACAGAACTTaGGCACGCTCTGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRRENRT*ARSAEL
Trigger: AAGTTCTGCAGAGCGTGCCCAAGTTCTGTTTTCCCT...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp CTGGTTAGGAGCAGCTATTATCATGGCCCACAGTGTCATTCAAGTAGCTCCAATAGGGAAAACAGAACTTaGGCACGCTCTGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: LVRSSYYHGPQCHSSSSNRENRT*ARSAEL
Trigger: AAGTTCTGCAGAGCGTGCCCAAGTTCTGTTTTCCCT...ATTGGAGCTACTTGAATGACACTGTGGGCCATGATAATAGCTGCTCCTAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
3UTR CAA 72 bp ATGTCAGGTGTGATGAAACAGGAGTGCACACTCAAGTaGACAGGAGTGTTTGCCTTTGGTACTGGGTGGTTA +
Preference number: 4 (lower is better)
Translates to: MSGVMKQECTLK*TGVFAFGTGWL
Trigger: TAACCACCCAGTACCAAAGGCAAACACTCCTGTCAACTTGAGTGTGCACTCCTGTTTCATCACACCTGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198759.5
CDS-3UTR TCA 90 bp GTTCATGGTAGAAAAAGGCATCACTGCTCTGCAGGACAAGATAACTCCTCTTTCAGTGCACACTCAAGTTaGCAGGAGTGTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: VHGRKRHHCSAGQDNSSFSAHSS*QECLPL
Trigger: CAAAGGCAAACACTCCTGTCAACTTGAGTGTGCACT...GAAAGAGGAGTTATCTTGTCCTGCAGAGCAGTGATGCCTTTTTCTACCATGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp GTTCATGGTAGAAAAAGGCATCACTGCTCTGCAGGACAAGATAACTCCTCTTTCCTGTTTCATCACGCTTaGGCGGTGCTTTACAAAGCT +
Preference number: 4 (lower is better)
Translates to: VHGRKRHHCSAGQDNSSFLFHHA*AVLYKA
Trigger: AGCTTTGTAAAGCACCGCTCAAGCGTGATGAAACAG...GAAAGAGGAGTTATCTTGTCCTGCAGAGCAGTGATGCCTTTTTCTACCATGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR TCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATCTGGGAACGCAGTCCTaGAGTCGGAGCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYLGTQS*SRSWLS
Trigger: GGAAAGCCAGCTCCGACTTCAGGACTGCGTTCCCAG...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR TCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCAAAGTCCGACATCCTTTaGAGGCTTCGTGTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNAKSDIL*RLRVLF
Trigger: AAAGAGGACACGAAGCCTTCAAAGGATGTCGGACTT...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCAGTTGACAGGAGTGTTTaGCTTTGGTACTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNAVDRSV*LWYWVV
Trigger: AACCACCCAGTACCAAAGGCAAACACTCCTGTCAAC...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGACCCGTAGCTGTGGACTaGTTCTTCAGCTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRPVAVD*FFSLFF
Trigger: GAAAAATAAGCTGAAGAAGCAGTCCACAGCTACGGG...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCAACTCTCCGGTATCGTTaGGAGTCCAGTTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSTLRYR*ESSYVR
Trigger: CCTGACATAACTGGACTCCCAACGATACCGGAGAGT...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp AGGCTATTTTCCATCAGTTTTGACATCTTGATCAGTTCATGCTCAGCCAGGTTAAGCGCAGCCGATCCATaGAGACAGGCAGTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: RLFSISFDILISSCSARLSAADP*RQAVKV
Trigger: CACTTTAACTGCCTGTCTCCATGGATCGGCTGCGCT...TAACCTGGCTGAGCATGAACTGATCAAGATGTCAAAACTGATGGAAAATAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCAAATCAGGTATGGCATTaGGGCACAGCAGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSNQVWH*GTAVVQ
Trigger: CTGGACTACTGCTGTGCCCCAATGCCATACCTGATT...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp AAGTTAGTACCTGATTTAACAGCACAGCAGAATTCGTTTTACGCTGGGAAACCAAGATTCCACTCTCCCTaGTCTCCAGAAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: KLVPDLTAQQNSFYAGKPRFHSP*SPEAHS
Trigger: GCTGTGTGCTTCTGGAGACCAGGGAGAGTGGAATCT...TGGTTTCCCAGCGTAAAACGAATTCTGCTGTGCTGTTAAATCAGGTACTAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
3UTR CAA 72 bp GGAGAAAGGGTTGTTTTAGCTCACAGTTACAGGTTATaGTCCATTGTGACAGTGAAGTCACAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GERVVLAHSYRL*SIVTVKSQQQQ
Trigger: CTGCTGCTGCTGTGACTTCACTGTCACAATGGACAATAACCTGTAACTGTGAGCTAAAACAACCCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CAA 72 bp AAGAAGTTTTTCAGCAAAGTCCCTGAGACGGGATCTTaGGGTTCTGTCCAACACTGTGATGTGGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: KKFFSKVPETGS*GSVQHCDVVVL
Trigger: CAAGACTACCACATCACAGTGTTGGACAGAACCCAAAGATCCCGTCTCAGGGACTTTGCTGAAAAACTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCAAGTGCACACTCAAGTTaGCAGGAGTGTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSSAHSS*QECLPL
Trigger: CAAAGGCAAACACTCCTGTCAACTTGAGTGTGCACT...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATTGTCATCCATGGATCTaGAGAAATCCAGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDCHPWI*RNPGSW
Trigger: CCAAGAGCCTGGATTTCTTCAGATCCATGGATGACA...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGTTGACAGGAGTGTTTaGCTTTGGTACTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDVDRSV*LWYWVV
Trigger: AACCACCCAGTACCAAAGGCAAACACTCCTGTCAAC...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp GTTCATGGTAGAAAAAGGCATCACTGCTCTGCAGGACAAGATAACTCCTCTTTCCCCGTAGCTGTGGACTaGTTCTTCAGCTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: VHGRKRHHCSAGQDNSSFPVAVD*FFSLFF
Trigger: GAAAAATAAGCTGAAGAAGCAGTCCACAGCTACGGG...GAAAGAGGAGTTATCTTGTCCTGCAGAGCAGTGATGCCTTTTTCTACCATGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp GTTCATGGTAGAAAAAGGCATCACTGCTCTGCAGGACAAGATAACTCCTCTTTCAGTTGCTTTGGTCACTaGTGTGTTGAACAATGCACC +
Preference number: 4 (lower is better)
Translates to: VHGRKRHHCSAGQDNSSFSCFGH*CVEQCT
Trigger: GGTGCATTGTTCAACACAGCAGTGACCAAAGCAACT...GAAAGAGGAGTTATCTTGTCCTGCAGAGCAGTGATGCCTTTTTCTACCATGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp AGGCTATTTTCCATCAGTTTTGACATCTTGATCAGTTCATGCTCAGCCAGGTTAGTCTGGGAAAGCTTGTaGTTCTCTCTGTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RLFSISFDILISSCSARLVWESL*FSLFSP
Trigger: GGGAGAGAACAGAGAGAAGCACAAGCTTTCCCAGAC...TAACCTGGCTGAGCATGAACTGATCAAGATGTCAAAACTGATGGAAAATAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp GGCTATGAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCCTTCAGAAGATATCTTaGTTGCCCGTTCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: GYEHLHSTSVKRRGQQPILQKIS*LPVQCH
Trigger: ATGACATTGAACGGGCAAGCAAGATATCTTCTGAAG...GATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTCATAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp TCTTGCCTTTTTCACAGTAATGAAGACCTTCCAGGAGAATATCAGACTAAGTGCACTCTCCGGTATCGTTaGGAGTCCAGTTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: SCLFHSNEDLPGEYQTKCTLRYR*ESSYVR
Trigger: CCTGACATAACTGGACTCCCAACGATACCGGAGAGT...GCACTTAGTCTGATATTCTCCTGGAAGGTCTTCATTACTGTGAAAAAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR CCA 90 bp AGTTCTCTACATGATCAAGGTACTAAAATGAACTCCAGAGAGTTTAAAAGGGGGTCTCATGCAGCATGCTaGCGTACAGTCGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: SSLHDQGTKMNSREFKRGSHAAC*RTVAAC
Trigger: ACATGCTGCGACTGTACGCCAGCATGCTGCATGAGA...CCCCCTTTTAAACTCTCTGGAGTTCATTTTAGTACCTTGATCATGTAGAGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR CCA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTCTTCCTCTCTCTGTTTaGGAAGCTTCAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPLPLSV*EASGAA
Trigger: TGCTGCTCCTGAAGCTTCCCAAACAGAGAGAGGAAG...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp GGAGCAGCTATTATCATGGCCCACAGTGTCATTCAAGTAGCTCCAATGGAAAAAGTCAAAAGTTCTTTCTaGATTTTCCCTGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: GAAIIMAHSVIQVAPMEKVKSSF*IFPGPA
Trigger: CGCAGGACCAGGGAAAATCCAGAAAGAACTTTTGAC...TTTTTCCATTGGAGCTACTTGAATGACACTGTGGGCCATGATAATAGCTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR TCA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGATTTTCACTCTCTCTATaGGACTGGAGTGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRFSLSL*DWSVFQ
Trigger: TTGGAATACACTCCAGTCTCATAGAGAGAGTGAAAA...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp TTTAGGCCAGAACACAGTCCTGGGTTTGAAGTCCATGATATCTTCAGCAATGCATGCTGTGTTGAACAATaGACCTCCTTTCTTGACTGT +
Preference number: 4 (lower is better)
Translates to: FRPEHSPGFEVHDIFSNACCVEQ*TSFLDC
Trigger: ACAGTCAAGAAAGGAGGTGCATTGTTCAACACAGCA...TGCATTGCTGAAGATATCATGGACTTCAAACCCAGGACTGTGTTCTGGCCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp TCACAGTTACAGGTTATTGTCCATTGTGACAGTGAAGTCACAGCAGCAGCAGATTGCTGTGTTGAACAATaGACCTCCTTTCTTGACTGT +
Preference number: 4 (lower is better)
Translates to: SQLQVIVHCDSEVTAAADCCVEQ*TSFLDC
Trigger: ACAGTCAAGAAAGGAGGTGCATTGTTCAACACAGCA...ATCTGCTGCTGCTGTGACTTCACTGTCACAATGGACAATAACCTGTAACTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGCCTCTTCCAGTTCCTTaGCCAAGTAATCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: EPEVLRRQFTHESDELELPLPVP*PSNLPE
Trigger: CTCTGGCAGATTACTTGGCCAAGGAACTGGAAGAGG...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp AGTTCTCTACATGATCAAGGTACTAAAATGAACTCCAGAGAGTTTAAAAGGGGGCCTCTTCCAGTTCCTTaGCCAAGTAATCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SSLHDQGTKMNSREFKRGPLPVP*PSNLPE
Trigger: CTCTGGCAGATTACTTGGCCAAGGAACTGGAAGAGG...CCCCCTTTTAAACTCTCTGGAGTTCATTTTAGTACCTTGATCATGTAGAGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR CCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGAGAAATCCAGGCTCTTaGCAGGCGCCAGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQRNPGS*QAPAFL
Trigger: AAGGAAAGCTGGCGCCTGCCAAGAGCCTGGATTTCT...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR TCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGCTGTTTCATCACGCTTaGGCGGTGCTTTACAAAGCT +
Preference number: 4 (lower is better)
Translates to: EPEVLRRQFTHESDELELLFHHA*AVLYKA
Trigger: AGCTTTGTAAAGCACCGCTCAAGCGTGATGAAACAG...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR TCA 90 bp AGTTCTCTACATGATCAAGGTACTAAAATGAACTCCAGAGAGTTTAAAAGGGGGGGTTCACACTCAAGTTaGCAGGAGTGTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SSLHDQGTKMNSREFKRGGSHSS*QECLPL
Trigger: CAAAGGCAAACACTCCTGTCAACTTGAGTGTGAACC...CCCCCTTTTAAACTCTCTGGAGTTCATTTTAGTACCTTGATCATGTAGAGAACT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR GCA 90 bp AGTTCTCTACATGATCAAGGTACTAAAATGAACTCCAGAGAGTTTAAAAGGGGGGTTGACAGGAGTGTTTaGCTTTGGTACTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SSLHDQGTKMNSREFKRGVDRSV*LWYWVV
Trigger: AACCACCCAGTACCAAAGGCAAACACTCCTGTCAAC...CCCCCTTTTAAACTCTCTGGAGTTCATTTTAGTACCTTGATCATGTAGAGAACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR GCA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGTGATGAAACAGGAGTaGACACTCAAGTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPVMKQE*TLKLTG
Trigger: TCCTGTCAACTTGAGTGTGCACTCCTGTTTCATCAC...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGATCACGCTTGAGCGGTaGTTTACAAAGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: EPEVLRRQFTHESDELELITLER*FTKLSS
Trigger: TGAGGAGAGCTTTGTAAAGCACCGCTCAAGCGTGAT...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp AGTTCTCTACATGATCAAGGTACTAAAATGAACTCCAGAGAGTTTAAAAGGGGGGTGATGAAACAGGAGTaGGGAATTAGTGAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SSLHDQGTKMNSREFKRGVMKQE*GISEGS
Trigger: TGACCCCTCACTAATTCCGCACTCCTGTTTCATCAC...CCCCCTTTTAAACTCTCTGGAGTTCATTTTAGTACCTTGATCATGTAGAGAACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR CCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGACTCTCCGGTATCGTTaGGAGTCCAGTTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQTLRYR*ESSYVR
Trigger: CCTGACATAACTGGACTCCCAACGATACCGGAGAGT...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATAGCGCAGCCGATCCATaGAGACAGGCAGTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYSAADP*RQAVKV
Trigger: CACTTTAACTGCCTGTCTCCATGGATCGGCTGCGCT...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp AAGTTAGTACCTGATTTAACAGCACAGCAGAATTCGTTTTACGCTGGGAAACCATATTCCAATCAGGTATaGCATTGGGGCACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: KLVPDLTAQQNSFYAGKPYSNQV*HWGTAV
Trigger: TACTGCTGTGCCCCAATGCCATACCTGATTGGAATA...TGGTTTCCCAGCGTAAAACGAATTCTGCTGTGCTGTTAAATCAGGTACTAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGTCAAAAGTTCTTTCTaGATTTTCCCTGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPVKSSF*IFPGPA
Trigger: CGCAGGACCAGGGAAAATCCAGAAAGAACTTTTGAC...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168527.8
ENSMUST00000200429.5
3UTR CAA 72 bp TCATCGCTCAGAAGCAGCTTGTCTGAAAGATTTATTTaGGGAGCTCCAGTTGTTGGTGCTCAGTATATAGAA +
Preference number: 4 (lower is better)
Translates to: SSLRSSLSERFI*GAPVVGAQYIE
Trigger: TTCTATATACTGAGCACCAACAACTGGAGCTCCCAAAATAAATCTTTCAGACAAGCTGCTTCTGAGCGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATGTCGCAGCATGTTGTTaGCATCCACGGCAACAAAGT +
Preference number: 4 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYVAACC*HPRQQS
Trigger: ACTTTGTTGCCGTGGATGTCAACAACATGCTGCGAC...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGATGCACCTCCTTTCTTaGCTGTATACACCCACTGCT +
Preference number: 4 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQMHLLS*LYTPTA
Trigger: AGCAGTGGGTGTATACAGTCAAGAAAGGAGGTGCAT...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGATCACGCTTGAGCGGTaGTTTACAAAGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQITLER*FTKLSS
Trigger: TGAGGAGAGCTTTGTAAAGCACCGCTCAAGCGTGAT...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTAGAGCTGAAGGTTAACTaGAGTCTCCAGGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: LGHTIRYQHSILITVTPLELKVN*SLQELF
Trigger: AAACAGTTCCTGGAGACTGCAGTTAACCTTCAGCTC...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGCCTTGTGTTTCAGCCTaGTCTTCACCTCCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQPCVSA*SSPPLV
Trigger: GACTAAAGGAGGTGAAGAGCAGGCTGAAACACAAGG...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR GCA 90 bp GGAGCAGCTATTATCATGGCCCACAGTGTCATTCAAGTAGCTCCAATGGAAAAATCATCTTTCAGAACTTaGTCACTGGCAATAAATAGC +
Preference number: 4 (lower is better)
Translates to: GAAIIMAHSVIQVAPMEKSSFRT*SLAINS
Trigger: GCTATTTATTGCCAGTGAGCAAGTTCTGAAAGATGA...TTTTTCCATTGGAGCTACTTGAATGACACTGTGGGCCATGATAATAGCTGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR CCA 90 bp TGGTGCTCAGTATATAGAATGACAGTGCAAACAGAAACACATATTTTCAATAGCAATCAGGTATGGCATTaGGGCACAGCAGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: WCSVYRMTVQTETHIFNSNQVWH*GTAVVQ
Trigger: CTGGACTACTGCTGTGCCCCAATGCCATACCTGATT...GCTATTGAAAATATGTGTTTCTGTTTGCACTGTCATTCTATATACTGAGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp TGGTGCTCAGTATATAGAATGACAGTGCAAACAGAAACACATATTTTCAATAGCAAGTGGAGCCTGACCTaGTGTTTGCTTCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: WCSVYRMTVQTETHIFNSKWSLT*CLLHFC
Trigger: GCAGAAGTGAAGCAAACACCAGGTCAGGCTCCACTT...GCTATTGAAAATATGTGTTTCTGTTTGCACTGTCATTCTATATACTGAGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR TCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATATGCACCTCCTTTCTTaGCTGTATACACCCACTGCT +
Preference number: 4 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYMHLLS*LYTPTA
Trigger: AGCAGTGGGTGTATACAGTCAAGAAAGGAGGTGCAT...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTCTTCAGAAGATATCTTaGTTGCCCGTTCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPLQKIS*LPVQCH
Trigger: ATGACATTGAACGGGCAAGCAAGATATCTTCTGAAG...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGTATTCCAATCAGGTATaGCATTGGGGCACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQYSNQV*HWGTAV
Trigger: TACTGCTGTGCCCCAATGCCATACCTGATTGGAATA...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGTTTTCACTCTCTCTATaGGACTGGAGTGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: EPEVLRRQFTHESDELELFSLSL*DWSVFQ
Trigger: TTGGAATACACTCCAGTCTCATAGAGAGAGTGAAAA...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR TCA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTATTTTCACTCTCTCTATaGGACTGGAGTGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: LGHTIRYQHSILITVTPLFSLSL*DWSVFQ
Trigger: TTGGAATACACTCCAGTCTCATAGAGAGAGTGAAAA...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATCCCGTAGCTGTGGACTaGTTCTTCAGCTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYPVAVD*FFSLFF
Trigger: GAAAAATAAGCTGAAGAAGCAGTCCACAGCTACGGG...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR GCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATAGTTGCTTTGGTCACTaGTGTGTTGAACAATGCACC +
Preference number: 4 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYSCFGH*CVEQCT
Trigger: GGTGCATTGTTCAACACAGCAGTGACCAAAGCAACT...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CCA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATGTCAAAAGTTCTTTCTaGATTTTCCCTGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYVKSSF*IFPGPA
Trigger: CGCAGGACCAGGGAAAATCCAGAAAGAACTTTTGAC...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CCA 90 bp AGTTCTCTACATGATCAAGGTACTAAAATGAACTCCAGAGAGTTTAAAAGGGGGGCAATAAATAGCTCTTaGTTCACACTCAAGTTGACA +
Preference number: 4 (lower is better)
Translates to: SSLHDQGTKMNSREFKRGAINSS*FTLKLT
Trigger: TGTCAACTTGAGTGTGAACCAAGAGCTATTTATTGC...CCCCCTTTTAAACTCTCTGGAGTTCATTTTAGTACCTTGATCATGTAGAGAACT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
3UTR CAA 72 bp CAGATAAATGGCTACATCGAGAGGTTTCTATTTGCCTaGGATGACGTATTATATTGTTCTGATGCTATCAAT +
Preference number: 4 (lower is better)
Translates to: QINGYIERFLFA*DDVLYCSDAIN
Trigger: ATTGATAGCATCAGAACAATATAATACGTCATCCAAGGCAAATAGAAACCTCTCGATGTAGCCATTTATCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
3UTR CAA 72 bp AATAAAGCAGCTATTTTTAAAAAGCATCTCTCGGTGTaGATTCTTGAGCGAGTACCATCTAAGCAAATACAT +
Preference number: 4 (lower is better)
Translates to: NKAAIFKKHLSV*ILERVPSKQIH
Trigger: ATGTATTTGCTTAGATGGTACTCGCTCAAGAATCAACACCGAGAGATGCTTTTTAAAAATAGCTGCTTTATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS GCA 90 bp GCCCTCAGAAAGGCCCGAGCCACTCCATCTCCCGTAGCTGTGGACTaGTTCTTCAGCTTATTTTTCAAGGCCGAGACCACATCACTGGGC +
Preference number: 5 (lower is better)
Translates to: ALRKARATPSPVAVD*FFSLFFKAETTSLG
Trigger: GCCCAGTGATGTGGTCTCGGCCTTGAAAAATAAGCTGAAGAAGCAGTCCACAGCTACGGGAGATGGAGTGGCTCGGGCCTTTCTGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACGGCTTCGTGTCCTCTTaGCCAGCCTTCTCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYGFVSS*PAFSQG
Trigger: TCCCTGGGAGAAGGCTGGCAAAGAGGACACGAAGCC...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp CCCATCCTCAGAAGGACAGGCTCCACCATCCACTACAAAAGAGGGAACCATTACCCTCGGGCTCCAGGCTaGTATCTCAGAGCATCTCGG +
Preference number: 5 (lower is better)
Translates to: PILRRTGSTIHYKRGNHYPRAPG*YLRASR
Trigger: CCGAGATGCTCTGAGATACAAGCCTGGAGCCCGAGG...GTAATGGTTCCCTCTTTTGTAGTGGATGGTGGAGCCTGTCCTTCTGAGGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp CTGAGCAGAGAAGGGACAGCTGTTGACTGCAAGAATGTCCACAGCCATTTGCTGAGGAAACGCGTTTCCTaGGGGATGGAGGGAGTTGCC +
Preference number: 5 (lower is better)
Translates to: LSREGTAVDCKNVHSHLLRKRVS*GMEGVA
Trigger: GGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCT...CAGCAAATGGCTGTGGACATTCTTGCAGTCAACAGCTGTCCCTTCTCTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp GGCTATGAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCGGCTTCGTGTCCTCTTaGCCAGCCTTCTCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: GYEHLHSTSVKRRGQQPIGFVSS*PAFSQG
Trigger: TCCCTGGGAGAAGGCTGGCAAAGAGGACACGAAGCC...GATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTCATAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp GAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTGGACTATGGGCTCGCCAGGCTaGTATCTCAGAGCATCTCGG +
Preference number: 5 (lower is better)
Translates to: EHLHSTSVKRRGQQPIWTMGSPG*YLRASR
Trigger: CCGAGATGCTCTGAGATACAAGCCTGGCGAGCCCAT...AGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCACAGCGGGAGTTGCTTaGGTCACTGCTGTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPTAGVA*VTAVLN
Trigger: GTTCAACACAGCAGTGACCAAAGCAACTCCCGCTGT...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp GAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTGGACTAGGAAACGCGTTTCCTaGGGGATGGAGGGAGTTGCC +
Preference number: 5 (lower is better)
Translates to: EHLHSTSVKRRGQQPIWTRKRVS*GMEGVA
Trigger: GGCAACTCCCTCCATCCCCAAGGAAACGCGTTTCCT...AGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS TCA 90 bp GAGCTGAAGGTTAACTGCAGTCTCCAGGAACTGTTTCATCACGCTTaGGCGGTGCTTTACAAAGCTCTCCTCACAGAAGGTGATGGGCTC +
Preference number: 5 (lower is better)
Translates to: ELKVNCSLQELFHHA*AVLYKALLTEGDGL
Trigger: GAGCCCATCACCTTCTGTGAGGAGAGCTTTGTAAAGCACCGCTCAAGCGTGATGAAACAGTTCCTGGAGACTGCAGTTAACCTTCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGTTGGTCACTGCTGTGTaGAACAATGCACCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVLVTAV*NNAPPF
Trigger: GAAAGGAGGTGCATTGTTCAACACAGCAGTGACCAA...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp TGGTCAGAGCAAGGACTCAGCCAAGCAGTGCCTCTGAATCTGTCCTTTAGGGTGCCATACTCTTCCTCATaGTCCTTGTGTTTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: WSEQGLSQAVPLNLSFRVPYSSS*SLCFSL
Trigger: CAGGCTGAAACACAAGGACAATGAGGAAGAGTATGG...CACCCTAAAGGACAGATTCAGAGGCACTGCTTGGCTGAGTCCTTGCTCTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS GCA 90 bp GGCGTGACTCTTTGCAAATTTGTATGCAGTCCGCACAGCGGGAGTTaGTTTGGTCACTGCTGTGTTGAACAATGCACCTCCTTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: GVTLCKFVCSPHSGS*FGHCCVEQCTSFLD
Trigger: GTCAAGAAAGGAGGTGCATTGTTCAACACAGCAGTGACCAAAGCAACTCCCGCTGTGCGGACTGCATACAAATTTGCAAAGAGTCACGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS CCA 90 bp CACGGCAACAAAGTACTCGGTCAGGTTTCTACTCTCCGGTATCGTTaGGAGTCCAGTTATGTCAGGTGTGATGAAACAGGAGTGCGGAAT +
Preference number: 5 (lower is better)
Translates to: HGNKVLGQVSTLRYR*ESSYVRCDETGVRN
Trigger: ATTCCGCACTCCTGTTTCATCACACCTGACATAACTGGACTCCCAACGATACCGGAGAGTAGAAACCTGACCGAGTACTTTGTTGCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR CAA 90 bp ACCCCAGCAGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCTGTGTCTGGGAAAGCTaGTGCTTCTCTCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: TPAGVQSQHNMAYACSTPCVWES*CFSLFS
Trigger: AGAGAACAGAGAGAAGCACAAGCTTTCCCAGACACA...GGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCTGCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp GGCTATGAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTTCTCACTGGGAGCGTaGGACTTGTTCGTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: GYEHLHSTSVKRRGQQPIFSLGA*DLFVGL
Trigger: CAAGCCTACGAACAAGTCCAACGCTCCCAGTGAGAA...GATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTCATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp GAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTGGACTTTCTCACTGGGAGCGTaGGACTTGTTCGTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: EHLHSTSVKRRGQQPIWTFSLGA*DLFVGL
Trigger: CAAGCCTACGAACAAGTCCAACGCTCCCAGTGAGAA...AGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS GCA 90 bp CTTACAGTGCTTAATTTGCTCGAGGTAATAATGATGCGCCTCTCATaGAGCATGCTGGCGTACAGTCGCAGCATGTTGTTGACATCCACG +
Preference number: 5 (lower is better)
Translates to: LTVLNLLEVIMMRLS*SMLAYSRSMLLTST
Trigger: CGTGGATGTCAACAACATGCTGCGACTGTACGCCAGCATGCTGCATGAGAGGCGCATCATTATTACCTCGAGCAAATTAAGCACTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR CAA 90 bp GGCTATGAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTACAGTCGCAGCATGTaGTTGACATCCACGGCAACA +
Preference number: 5 (lower is better)
Translates to: GYEHLHSTSVKRRGQQPIYSRSM*LTSTAT
Trigger: TGTTGCCGTGGATGTCAACAACATGCTGCGACTGTA...GATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTCATAGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCAATGGGCTCGCCAGGCTaGTATCTCAGAGCATCTCGG +
Preference number: 5 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSMGSPG*YLRASR
Trigger: CCGAGATGCTCTGAGATACAAGCCTGGCGAGCCCAT...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp GAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTGGACTGAAGTCCGACATCCTTaGAAGGCTTCGTGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: EHLHSTSVKRRGQQPIWTEVRHP*KASCPL
Trigger: AAGAGGACACGAAGCCTTCAAAGGATGTCGGACTTC...AGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS GCA 90 bp TGCAAATTTGTATGCAGTCCGCACAGCGGGAGTTGCTTTGGTCACTaGTGTGTTGAACAATGCACCTCCTTTCTTGACTGTATACACCCA +
Preference number: 5 (lower is better)
Translates to: CKFVCSPHSGSCFGH*CVEQCTSFLDCIHP
Trigger: TGGGTGTATACAGTCAAGAAAGGAGGTGCATTGTTCAACACAGCAGTGACCAAAGCAACTCCCGCTGTGCGGACTGCATACAAATTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS GCA 90 bp AAACAAATTCTGCCTCCAGATGTGAGCCTGCAGAACCCAAATCGCTaGTTACTTTCCATGTCTGTCAGGACGAAGGTAAAGTGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: KQILPPDVSLQNPNR*LLSMSVRTKVKCCP
Trigger: TGGACAGCACTTTACCTTCGTCCTGACAGACATGGAAAGTAAGCAGCGATTTGGGTTCTGCAGGCTCACATCTGGAGGCAGAATTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168527.8
ENSMUST00000200429.5
ENSMUST00000200533.5
CDS-3UTR CAA 90 bp TCACCCATGCATTTTACTCGGCAACGTCTTCACTTTAACACAACTGCAGACCGATACTCTCCGGTATCGTaGGGAGTCCAGTTATGTCAG +
Preference number: 5 (lower is better)
Translates to: SPMHFTRQRLHFNTTADRYSPVS*GVQLCQ
Trigger: CTGACATAACTGGACTCCCAACGATACCGGAGAGTA...TCGGTCTGCAGTTGTGTTAAAGTGAAGACGTTGCCGAGTAAAATGCATGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp GAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTGGACTAATGCACCTCCTTTCTaGACTGTATACACCCACTGC +
Preference number: 5 (lower is better)
Translates to: EHLHSTSVKRRGQQPIWTNAPPF*TVYTHC
Trigger: GCAGTGGGTGTATACAGTCAAGAAAGGAGGTGCATT...AGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp GTTCATGGTAGAAAAAGGCATCACTGCTCTGCAGGACAAGATAACTCCTCTTTCACAGCGGGAGTTGCTTaGGTCACTGCTGTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: VHGRKRHHCSAGQDNSSFTAGVA*VTAVLN
Trigger: GTTCAACACAGCAGTGACCAAAGCAACTCCCGCTGT...GAAAGAGGAGTTATCTTGTCCTGCAGAGCAGTGATGCCTTTTTCTACCATGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp GAGCATCTTCACAGCACGTCAGTTAAGAGAAGAGGACAACAGCCTATCTGGACTTCTTCCTCATTGTCCTaGTGTTTCAGCCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: EHLHSTSVKRRGQQPIWTSSSLS*CFSLLF
Trigger: GAAGAGCAGGCTGAAACACAAGGACAATGAGGAAGA...AGTCCAGATAGGCTGTTGTCCTCTTCTCTTAACTGACGTGCTGTGAAGATGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp CAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTGGGTCAAAGAAATCCAGGCTCTaGGCAGGCGCCAGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: QESSLCLTNKYFMGIPGSKKSRL*AGASFP
Trigger: AGGAAAGCTGGCGCCTGCCAAGAGCCTGGATTTCTT...TGACCCAGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATCAATCAGGTATGGCATaGGGGCACAGCAGTAGTCCA +
Preference number: 5 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDQSGMA*GHSSSP
Trigger: TGGACTACTGCTGTGCCCCAATGCCATACCTGATTG...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp AGGTGTTCAAAGTCAACACAACATGGCATATGCTTGCAGCACACCCCTTCAGATCCATACTCTTCCTCATaGTCCTTGTGTTTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: RCSKSTQHGICLQHTPSDPYSSS*SLCFSL
Trigger: CAGGCTGAAACACAAGGACAATGAGGAAGAGTATGG...ATCTGAAGGGGTGTGCTGCAAGCATATGCCATGTTGTGTTGACTTTGAACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp AGGCTATTTTCCATCAGTTTTGACATCTTGATCAGTTCATGCTCAGCCAGGTTAAAGAAATCCAGGCTCTaGGCAGGCGCCAGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: RLFSISFDILISSCSARLKKSRL*AGASFP
Trigger: AGGAAAGCTGGCGCCTGCCAAGAGCCTGGATTTCTT...TAACCTGGCTGAGCATGAACTGATCAAGATGTCAAAACTGATGGAAAATAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS TCA 90 bp GCGTTAAGCTTTGCCAGTCGACCATCAATAAACTGCTTAAAGAGCTaGAGGTTAACTGCAGTCTCCAGGAACTGTTTCATCACGCTTGAG +
Preference number: 5 (lower is better)
Translates to: ALSFASRPSINCLKS*RLTAVSRNCFITLE
Trigger: CTCAAGCGTGATGAAACAGTTCCTGGAGACTGCAGTTAACCTTCAGCTCTTTAAGCAGTTTATTGATGGTCGACTGGCAAAGCTTAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATTACTCTCCGGTATCGTaGGGAGTCCAGTTATGTCAG +
Preference number: 5 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDYSPVS*GVQLCQ
Trigger: CTGACATAACTGGACTCCCAACGATACCGGAGAGTA...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp CTGCATGTACTTTTAATGGCTTGTAAGTCATGGTATCACTGGACTCTGAGCTTCTACTCTCCGGTATCGTaGGGAGTCCAGTTATGTCAG +
Preference number: 5 (lower is better)
Translates to: LHVLLMACKSWYHWTLSFYSPVS*GVQLCQ
Trigger: CTGACATAACTGGACTCCCAACGATACCGGAGAGTA...GAAGCTCAGAGTCCAGTGATACCATGACTTACAAGCCATTAAAAGTACATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATTACAGTCGCAGCATGTaGTTGACATCCACGGCAACA +
Preference number: 5 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDYSRSM*LTSTAT
Trigger: TGTTGCCGTGGATGTCAACAACATGCTGCGACTGTA...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp GTTCATGGTAGAAAAAGGCATCACTGCTCTGCAGGACAAGATAACTCCTCTTTCTTGGTCACTGCTGTGTaGAACAATGCACCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: VHGRKRHHCSAGQDNSSFLVTAV*NNAPPF
Trigger: GAAAGGAGGTGCATTGTTCAACACAGCAGTGACCAA...GAAAGAGGAGTTATCTTGTCCTGCAGAGCAGTGATGCCTTTTTCTACCATGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp AGGCTATTTTCCATCAGTTTTGACATCTTGATCAGTTCATGCTCAGCCAGGTTAAGCCTGACCTGGTGTTaGCTTCACTTCTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: RLFSISFDILISSCSARLSLTWC*LHFCSS
Trigger: GGAAGAGCAGAAGTGAAGCAAACACCAGGTCAGGCT...TAACCTGGCTGAGCATGAACTGATCAAGATGTCAAAACTGATGGAAAATAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp TCTTGCCTTTTTCACAGTAATGAAGACCTTCCAGGAGAATATCAGACTAAGTGCTACTCTCCGGTATCGTaGGGAGTCCAGTTATGTCAG +
Preference number: 5 (lower is better)
Translates to: SCLFHSNEDLPGEYQTKCYSPVS*GVQLCQ
Trigger: CTGACATAACTGGACTCCCAACGATACCGGAGAGTA...GCACTTAGTCTGATATTCTCCTGGAAGGTCTTCATTACTGTGAAAAAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR CAA 90 bp TCTTGCCTTTTTCACAGTAATGAAGACCTTCCAGGAGAATATCAGACTAAGTGCTACAGTCGCAGCATGTaGTTGACATCCACGGCAACA +
Preference number: 5 (lower is better)
Translates to: SCLFHSNEDLPGEYQTKCYSRSM*LTSTAT
Trigger: TGTTGCCGTGGATGTCAACAACATGCTGCGACTGTA...GCACTTAGTCTGATATTCTCCTGGAAGGTCTTCATTACTGTGAAAAAGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR CAA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGCAATCAGGTATGGCATaGGGGCACAGCAGTAGTCCA +
Preference number: 5 (lower is better)
Translates to: EPEVLRRQFTHESDELELQSGMA*GHSSSP
Trigger: TGGACTACTGCTGTGCCCCAATGCCATACCTGATTG...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp GACACCAACCCAGAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATACTGTTTCATCACGCTaGAGCGGTGCTTTACAAAGC +
Preference number: 5 (lower is better)
Translates to: DTNPEPEVLRRQFTHESDTVSSR*SGALQS
Trigger: GCTTTGTAAAGCACCGCTCAAGCGTGATGAAACAGT...ATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTCTGGGTTGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp GGAGCAGCTATTATCATGGCCCACAGTGTCATTCAAGTAGCTCCAATGGAAAAAAAAGTGCTGTCCAACTaGATTCTGAGACACCCTTTC +
Preference number: 5 (lower is better)
Translates to: GAAIIMAHSVIQVAPMEKKVLSN*ILRHPF
Trigger: GAAAGGGTGTCTCAGAATCAAGTTGGACAGCACTTT...TTTTTCCATTGGAGCTACTTGAATGACACTGTGGGCCATGATAATAGCTGCTCC
44% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS GCA 90 bp ACCCGAAGTGATCTCTTCTTCGAAGATATCAGAGAAACCTCTTCCTaGGTTAAGCTTTGCCAGTCGACCATCAATAAACTGCTTAAAGAG +
Preference number: 5 (lower is better)
Translates to: TRSDLFFEDIRETSS*VKLCQSTINKLLKE
Trigger: CTCTTTAAGCAGTTTATTGATGGTCGACTGGCAAAGCTTAACGCAGGAAGAGGTTTCTCTGATATCTTCGAAGAAGAGATCACTTCGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS GCA 90 bp ATGAAACAGGAGTGCGGAATTAGTGAGGGGTCATCTTTCAGAACTTaGTCACTGGCAATAAATAGCTCTTGGTTCACACTCAAGTTGACA +
Preference number: 5 (lower is better)
Translates to: MKQECGISEGSSFRT*SLAINSSWFTLKLT
Trigger: TGTCAACTTGAGTGTGAACCAAGAGCTATTTATTGCCAGTGAGCAAGTTCTGAAAGATGACCCCTCACTAATTCCGCACTCCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS-3UTR CAA 90 bp AGGCTATTTTCCATCAGTTTTGACATCTTGATCAGTTCATGCTCAGCCAGGTTAACTGTTTCATCACGCTaGAGCGGTGCTTTACAAAGC +
Preference number: 5 (lower is better)
Translates to: RLFSISFDILISSCSARLTVSSR*SGALQS
Trigger: GCTTTGTAAAGCACCGCTCAAGCGTGATGAAACAGT...TAACCTGGCTGAGCATGAACTGATCAAGATGTCAAAACTGATGGAAAATAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp AGGCTATTTTCCATCAGTTTTGACATCTTGATCAGTTCATGCTCAGCCAGGTTAAATGCACCTCCTTTCTaGACTGTATACACCCACTGC +
Preference number: 5 (lower is better)
Translates to: RLFSISFDILISSCSARLNAPPF*TVYTHC
Trigger: GCAGTGGGTGTATACAGTCAAGAAAGGAGGTGCATT...TAACCTGGCTGAGCATGAACTGATCAAGATGTCAAAACTGATGGAAAATAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS GCA 90 bp CTCTTCTTCGAAGATATCAGAGAAACCTCTTCCTGCGTTAAGCTTTaGCAGTCGACCATCAATAAACTGCTTAAAGAGCTGAAGGTTAAC +
Preference number: 5 (lower is better)
Translates to: LFFEDIRETSSCVKL*QSTINKLLKELKVN
Trigger: GTTAACCTTCAGCTCTTTAAGCAGTTTATTGATGGTCGACTGGCAAAGCTTAACGCAGGAAGAGGTTTCTCTGATATCTTCGAAGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGAGTCGCAGCATGTTGTaGACATCCACGGCAACAAAG +
Preference number: 5 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQSRSML*TSTATK
Trigger: CTTTGTTGCCGTGGATGTCAACAACATGCTGCGACT...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGTACAGTCGCAGCATGTaGTTGACATCCACGGCAACA +
Preference number: 5 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQYSRSM*LTSTAT
Trigger: TGTTGCCGTGGATGTCAACAACATGCTGCGACTGTA...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp TGGTGCTCAGTATATAGAATGACAGTGCAAACAGAAACACATATTTTCAATAGCCAATCAGGTATGGCATaGGGGCACAGCAGTAGTCCA +
Preference number: 5 (lower is better)
Translates to: WCSVYRMTVQTETHIFNSQSGMA*GHSSSP
Trigger: TGGACTACTGCTGTGCCCCAATGCCATACCTGATTG...GCTATTGAAAATATGTGTTTCTGTTTGCACTGTCATTCTATATACTGAGCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTAAATGCACCTCCTTTCTaGACTGTATACACCCACTGC +
Preference number: 5 (lower is better)
Translates to: LGHTIRYQHSILITVTPLNAPPF*TVYTHC
Trigger: GCAGTGGGTGTATACAGTCAAGAAAGGAGGTGCATT...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp CTGGGTCACACCATTAGATATCAGCATAGCATCTTAATAACAGTCACACCATTATCTTCCTCATTGTCCTaGTGTTTCAGCCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LGHTIRYQHSILITVTPLSSSLS*CFSLLF
Trigger: GAAGAGCAGGCTGAAACACAAGGACAATGAGGAAGA...TAATGGTGTGACTGTTATTAAGATGCTATGCTGATATCTAATGGTGTGACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp ATCGTGACCAATTTTATTTTCAGCGACATTATTGGGTACTTTATGGCAAAGCAGGAAGTCCGACATCCTTaGAAGGCTTCGTGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: IVTNFIFSDIIGYFMAKQEVRHP*KASCPL
Trigger: AAGAGGACACGAAGCCTTCAAAGGATGTCGGACTTC...CTGCTTTGCCATAAAGTACCCAATAATGTCGCTGAAAATAAAATTGGTCACGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp GTTGACCAGGAATCTTCCCTTTGTTTAACCAACAAGTATTTCATGGGCATTCCTAAAGTGCTGTCCAACTaGATTCTGAGACACCCTTTC +
Preference number: 5 (lower is better)
Translates to: VDQESSLCLTNKYFMGIPKVLSN*ILRHPF
Trigger: GAAAGGGTGTCTCAGAATCAAGTTGGACAGCACTTT...AGGAATGCCCATGAAATACTTGTTGGTTAAACAAAGGGAAGATTCCTGGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp GAACCTGAAGTTCTCAGGAGACAATTTACTCATGAAAGTGATGAACTTGAACTGAAAGTGCTGTCCAACTaGATTCTGAGACACCCTTTC +
Preference number: 5 (lower is better)
Translates to: EPEVLRRQFTHESDELELKVLSN*ILRHPF
Trigger: GAAAGGGTGTCTCAGAATCAAGTTGGACAGCACTTT...CAGTTCAAGTTCATCACTTTCATGAGTAAATTGTCTCCTGAGAACTTCAGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS-3UTR CAA 90 bp TTTATTGTGGCTGAGGCAGTTCGTTATGATACAATAATGCAATCTCCACATTATTGTGTCTGGGAAAGCTaGTGCTTCTCTCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: FIVAEAVRYDTIMQSPHYCVWES*CFSLFS
Trigger: AGAGAACAGAGAGAAGCACAAGCTTTCCCAGACACA...ATAATGTGGAGATTGCATTATTGTATCATAACGAACTGCCTCAGCCACAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS-3UTR CAA 90 bp TCTTGCCTTTTTCACAGTAATGAAGACCTTCCAGGAGAATATCAGACTAAGTGCCTTACAGTGCTTAATTaGCTCGAGGTAATAATGATG +
Preference number: 5 (lower is better)
Translates to: SCLFHSNEDLPGEYQTKCLTVLN*LEVIMM
Trigger: CATCATTATTACCTCGAGCAAATTAAGCACTGTAAG...GCACTTAGTCTGATATTCTCCTGGAAGGTCTTCATTACTGTGAAAAAGGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS TCA 72 bp AATGCACCTCCTTTCTTGACTGTATACACCCACTGCTaGTATGACCTCGGGCTCCCTCCACAGAAGCCACCC +
Preference number: 6 (lower is better)
Translates to: NAPPFLTVYTHC*YDLGLPPQKPP
Trigger: GGGTGGCTTCTGTGGAGGGAGCCCGAGGTCATATCAGCAGTGGGTGTATACAGTCAAGAAAGGAGGTGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS GCA 72 bp AAGGCCCGAGCCACTCCATCTCCCGTAGCTGTGGACTaGTTCTTCAGCTTATTTTTCAAGGCCGAGACCACA +
Preference number: 6 (lower is better)
Translates to: KARATPSPVAVD*FFSLFFKAETT
Trigger: TGTGGTCTCGGCCTTGAAAAATAAGCTGAAGAAGCAGTCCACAGCTACGGGAGATGGAGTGGCTCGGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS GCA 72 bp CTGCCTCCAGATGTGAGCCTGCAGAACCCAAATCGCTaGTTACTTTCCATGTCTGTCAGGACGAAGGTAAAG +
Preference number: 6 (lower is better)
Translates to: LPPDVSLQNPNR*LLSMSVRTKVK
Trigger: CTTTACCTTCGTCCTGACAGACATGGAAAGTAAGCAGCGATTTGGGTTCTGCAGGCTCACATCTGGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168527.8
ENSMUST00000200429.5
ENSMUST00000200533.5
CDS CCA 72 bp TCTCTCTATGAGACTGGAGTGTATTCCAATCAGGTATaGCATTGGGGCACAGCAGTAGTCCAGCAGGTGTGG +
Preference number: 6 (lower is better)
Translates to: SLYETGVYSNQV*HWGTAVVQQVW
Trigger: CCACACCTGCTGGACTACTGCTGTGCCCCAATGCCATACCTGATTGGAATACACTCCAGTCTCATAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
ENSMUST00000200429.5
CDS CAA 72 bp GTCCGCACAGCGGGAGTTGCTTTGGTCACTGCTGTGTaGAACAATGCACCTCCTTTCTTGACTGTATACACC +
Preference number: 6 (lower is better)
Translates to: VRTAGVALVTAV*NNAPPFLTVYT
Trigger: GGTGTATACAGTCAAGAAAGGAGGTGCATTGTTCAACACAGCAGTGACCAAAGCAACTCCCGCTGTGCGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS TCA 72 bp AATGCACCTCCTTTCTTGACTGTATACACCCACTGCTaGTATGACCTCGGGCTCCAGGCTTGTATCTCAGAG +
Preference number: 6 (lower is better)
Translates to: NAPPFLTVYTHC*YDLGLQACISE
Trigger: CTCTGAGATACAAGCCTGGAGCCCGAGGTCATATCAGCAGTGGGTGTATACAGTCAAGAAAGGAGGTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200429.5
CDS GCA 72 bp AGCGGGAGTTGCTTTGGTCACTGCTGTGTTGAACAATaGACCTCCTTTCTTGACTGTATACACCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: SGSCFGHCCVEQ*TSFLDCIHPLL
Trigger: CAGCAGTGGGTGTATACAGTCAAGAAAGGAGGTGCATTGTTCAACACAGCAGTGACCAAAGCAACTCCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS GCA 72 bp CTTTGCAAATTTGTATGCAGTCCGCACAGCGGGAGTTaGTTTGGTCACTGCTGTGTTGAACAATGCACCTCC +
Preference number: 6 (lower is better)
Translates to: LCKFVCSPHSGS*FGHCCVEQCTS
Trigger: GGAGGTGCATTGTTCAACACAGCAGTGACCAAAGCAACTCCCGCTGTGCGGACTGCATACAAATTTGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS TCA 72 bp GTTAACTGCAGTCTCCAGGAACTGTTTCATCACGCTTaGGCGGTGCTTTACAAAGCTCTCCTCACAGAAGGT +
Preference number: 6 (lower is better)
Translates to: VNCSLQELFHHA*AVLYKALLTEG
Trigger: ACCTTCTGTGAGGAGAGCTTTGTAAAGCACCGCTCAAGCGTGATGAAACAGTTCCTGGAGACTGCAGTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS CAA 72 bp CATGTCTGTCAGGACGAAGGTAAAGTGCTGTCCAACTaGATTCTGAGACACCCTTTCCACATCGAAGGGAAA +
Preference number: 6 (lower is better)
Translates to: HVCQDEGKVLSN*ILRHPFHIEGK
Trigger: TTTCCCTTCGATGTGGAAAGGGTGTCTCAGAATCAAGTTGGACAGCACTTTACCTTCGTCCTGACAGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168527.8
ENSMUST00000200429.5
ENSMUST00000200533.5
CDS CAA 72 bp CAAAGGCGCAAGTGTGAAGGACTTACAGTGCTTAATTaGCTCGAGGTAATAATGATGCGCCTCTCATGCAGC +
Preference number: 6 (lower is better)
Translates to: QRRKCEGLTVLN*LEVIMMRLSCS
Trigger: GCTGCATGAGAGGCGCATCATTATTACCTCGAGCAAATTAAGCACTGTAAGTCCTTCACACTTGCGCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5
CDS TCA 72 bp TTTGCCAGTCGACCATCAATAAACTGCTTAAAGAGCTaGAGGTTAACTGCAGTCTCCAGGAACTGTTTCATC +
Preference number: 6 (lower is better)
Translates to: FASRPSINCLKS*RLTAVSRNCFI
Trigger: GATGAAACAGTTCCTGGAGACTGCAGTTAACCTTCAGCTCTTTAAGCAGTTTATTGATGGTCGACTGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS GCA 72 bp GAAGATATCAGAGAAACCTCTTCCTGCGTTAAGCTTTaGCAGTCGACCATCAATAAACTGCTTAAAGAGCTG +
Preference number: 6 (lower is better)
Translates to: EDIRETSSCVKL*QSTINKLLKEL
Trigger: CAGCTCTTTAAGCAGTTTATTGATGGTCGACTGGCAAAGCTTAACGCAGGAAGAGGTTTCTCTGATATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094505.6
ENSMUST00000168527.8
CDS CCA 72 bp TCTTTCAGAACTTGCTCACTGGCAATAAATAGCTCTTaGTTCACACTCAAGTTGACAGGAGTGTTTGCCTTT +
Preference number: 6 (lower is better)
Translates to: SFRTCSLAINSS*FTLKLTGVFAF
Trigger: AAAGGCAAACACTCCTGTCAACTTGAGTGTGAACCAAGAGCTATTTATTGCCAGTGAGCAAGTTCTGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200533.5