RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DENN2B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031024

Ensembl transcript IDs: ENSMUST00000077909.9, ENSMUST00000079282.8, ENSMUST00000084738.5, ENSMUST00000168005.8, ENSMUST00000207394.2, ENSMUST00000207745.2, ENSMUST00000208583.2

Found 439 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCATCATaGCCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTG +
Preference number: 1 (lower is better)
Translates to: EHLWMVEGEMPCTAS*PPLTDGSSASHDSL
Trigger: CAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGGCCATGATGCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR TCA 90 bp GGCAGCAGGGCCTCAGGCAGACAGGCCAGAAGTCTTGAGGAAACATaGGTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTC +
Preference number: 1 (lower is better)
Translates to: GSRASGRQARSLEET*VVWLRQSAAHNWPV
Trigger: GACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCACTCATGTTTCCTCAAGACTTCTGGCCTGTCTGCCTGAGGCCCTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR TCA 90 bp CAGGCAGACAGGCCAGAAGTCTTGAGGAAACATGAGTGGTTTGGCTaGGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGC +
Preference number: 1 (lower is better)
Translates to: QADRPEVLRKHEWFG*DSQLHIIGQSPAPS
Trigger: GCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCACTCATGTTTCCTCAAGACTTCTGGCCTGTCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR CCA 90 bp ACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTaGCCCTTTGGGAATATACAAATATTTACCAGATTTTCTTTGCTT +
Preference number: 1 (lower is better)
Translates to: TQQDSIQAQTRQEST*PFGNIQIFTRFSLL
Trigger: AAGCAAAGAAAATCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGCTGGGCCCTCTCCCTaGGCTCTGCAAAGCACTAAA +
Preference number: 2 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQAGPSP*ALQSTK
Trigger: TTTAGTGCTTTGCAGAGCCCAGGGAGAGGGCCCAGC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR TCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGCATGAGTGGTTTGGCTaGGACAGTCAGCTGCACATA +
Preference number: 2 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEHEWFG*DSQLHI
Trigger: TATGTGCAGCTGACTGTCTCAGCCAAACCACTCATG...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGCTGGGCCCTCTCCCTaGGCTCTGCAAAGCACTAAA +
Preference number: 2 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQAGPSP*ALQSTK
Trigger: TTTAGTGCTTTGCAGAGCCCAGGGAGAGGGCCCAGC...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAAAGGCAGAAGTGGGCTaGCTTGGAGTGGGGCCTGTA +
Preference number: 2 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQKAEVG*LGVGPV
Trigger: TACAGGCCCCACTCCAAGCCAGCCCACTTCTGCCTT...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR TCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGTATCCTGGAATATGGTaGAGGCAGAAGTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQYPGIW*RQKWAG
Trigger: GCCAGCCCACTTCTGCCTTCACCATATTCCAGGATA...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR TCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGACAGGCCAGAAGTCTTaGGGAAACATGAGTGGTTTG +
Preference number: 2 (lower is better)
Translates to: PPLTDGSSASHDSLTMSETGQKS*GNMSGL
Trigger: CAAACCACTCATGTTTCCTCAAGACTTCTGGCCTGT...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGCTGGGCCCTCTCCCTaGGCTCTGCAAAGCACTAAA +
Preference number: 2 (lower is better)
Translates to: LHPSSDKARKHLALWEYTAGPSP*ALQSTK
Trigger: TTTAGTGCTTTGCAGAGCCCAGGGAGAGGGCCCAGC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR TCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTTATCCTGGAATATGGTaGAGGCAGAAGTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: RSDPCLSETRGLADRGTTYPGIW*RQKWAG
Trigger: GCCAGCCCACTTCTGCCTTCACCATATTCCAGGATA...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR TCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCGAGCTCCGCTTCCCATaGCTCACTGACCATGTCAGA +
Preference number: 2 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRELRFP*LTDHVR
Trigger: TCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTC...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR GCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCAGGACCAGGCCCAAGTaGCTGGCTCTACATTGCAAA +
Preference number: 2 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRRTRPK*LALHCK
Trigger: TTTGCAATGTAGAGCCAGGCACTTGGGCCTGGTCCT...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCTCAGCTGCACATAATTaGCCAGTCACCAGCACCCAG +
Preference number: 2 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRSAAHN*PVTSTQ
Trigger: CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGA...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCGACCATGTCAGAGGATaGAAGGAACAAGGACCAGGC +
Preference number: 2 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRDHVRG*KEQGPG
Trigger: GCCTGGTCCTTGTTCCTTCCATCCTCTGACATGGTC...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR TCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTAGTCTTGAGGAAACATaGGTGGTTTGGCTGAGACAG +
Preference number: 2 (lower is better)
Translates to: RSDPCLSETRGLADRGTTSLEET*VVWLRQ
Trigger: CTGTCTCAGCCAAACCACTCATGTTTCCTCAAGACT...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGTTACAAACAGTATCCTaGAATATGGTGAAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQLQTVS*NMVKAE
Trigger: TTCTGCCTTCACCATATTCCAGGATACTGTTTGTAA...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGTTACAAACAGTATCCTaGAATATGGTGAAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQLQTVS*NMVKAE
Trigger: TTCTGCCTTCACCATATTCCAGGATACTGTTTGTAA...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTaGGAATATACAAATATTTAC +
Preference number: 2 (lower is better)
Translates to: LASHQHPARLHPSSDKARKHLAL*EYTNIY
Trigger: GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTT...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR TCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGATATCCTGGAATATGGTaGAGGCAGAAGTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRYPGIW*RQKWAG
Trigger: GCCAGCCCACTTCTGCCTTCACCATATTCCAGGATA...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAATTACAAACAGTATCCTaGAATATGGTGAAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQLQTVS*NMVKAE
Trigger: TTCTGCCTTCACCATATTCCAGGATACTGTTTGTAA...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAAAGCACCTGGCCCTTTaGGAATATACAAATATTTAC +
Preference number: 2 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQKHLAL*EYTNIY
Trigger: GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTT...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGAGCTGGGCCCTCTCCCTaGGCTCTGCAAAGCACTAAA +
Preference number: 2 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRAGPSP*ALQSTK
Trigger: TTTAGTGCTTTGCAGAGCCCAGGGAGAGGGCCCAGC...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR CCA 72 bp TGGATGGTGGAAGGAGAAATGCCCTGTACCGCATCATaGCCACCACTGACTGACGGGAGCTCCGCTTCCCAT +
Preference number: 3 (lower is better)
Translates to: WMVEGEMPCTAS*PPLTDGSSASH
Trigger: ATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGGCCATGATGCGGTACAGGGCATTTCTCCTTCCACCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR TCA 72 bp CAGCAGATTATTTACAAACAGTATCCTGGAATATGGTaGAGGCAGAAGTGGGCTGGCTTGGAGTGGGGCCTG +
Preference number: 3 (lower is better)
Translates to: QQIIYKQYPGIW*RQKWAGLEWGL
Trigger: CAGGCCCCACTCCAAGCCAGCCCACTTCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR TCA 72 bp AGGCCAGAAGTCTTGAGGAAACATGAGTGGTTTGGCTaGGACAGTCAGCTGCACATAATTGGCCAGTCACCA +
Preference number: 3 (lower is better)
Translates to: RPEVLRKHEWFG*DSQLHIIGQSP
Trigger: TGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCACTCATGTTTCCTCAAGACTTCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CAA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGACCAGATTTTCTTTGCTaGTTACAAAAACAGGAAAGC +
Preference number: 3 (lower is better)
Translates to: LASHQHPARLHPSSDKARPDFLC*LQKQES
Trigger: GCTTTCCTGTTTTTGTAACAAGCAAAGAAAATCTGG...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CAA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGCCAGATTTTCTTTGCTaGTTACAAAAACAGGAAAGC +
Preference number: 3 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQPDFLC*LQKQES
Trigger: GCTTTCCTGTTTTTGTAACAAGCAAAGAAAATCTGG...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CAA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAACCAGATTTTCTTTGCTaGTTACAAAAACAGGAAAGC +
Preference number: 3 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQPDFLC*LQKQES
Trigger: GCTTTCCTGTTTTTGTAACAAGCAAAGAAAATCTGG...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CAA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCTCAGAAACAAGAGGCTaGGCAGATAGGGGAACTACT +
Preference number: 3 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRSETRG*ADRGTT
Trigger: AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGA...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR-3UTR CAA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACCAGATTTTCTTTGCTaGTTACAAAAACAGGAAAGC +
Preference number: 3 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIPDFLC*LQKQES
Trigger: GCTTTCCTGTTTTTGTAACAAGCAAAGAAAATCTGG...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR CCA 72 bp AAAATGAATGTACAGTTTATTGAGAACATCTGTGGATaGTGGAAGGAGAAATGCCCTGTACCGCATCATGGC +
Preference number: 3 (lower is better)
Translates to: KMNVQFIENICG*WKEKCPVPHHG
Trigger: GCCATGATGCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTACATTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGTCCGGCCACTCCTCCTaGCCTGCTGCTGGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSESGHSS*PAAGAY
Trigger: GTAAGCCCCAGCAGCAGGGCAGGAGGAGTGGCCGGA...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGGGACAAGCTTGGGAATaGGGCGGGACCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEGQAWE*GGTCGW
Trigger: CCAGCCGCAGGTCCCGCCGCATTCCCAAGCTTGTCC...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGGGCGGGACCTGCGGCTaGACAGCAGCTCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEGGTCG*TAAHLW
Trigger: CCACAAGTGAGCTGCTGTCCAGCCGCAGGTCCCGCC...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGATGGGGCAGCCCTCACTaGCCGACCACTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARWGSPH*PTTRSQ
Trigger: CTGGGAGCGAGTGGTCGGTCAGTGAGGGCTGCCCCA...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGTCCAGGGGTGGGCCTaGCTCCCCAGCAACTCCGGC +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQVQGWA*LPSNSG
Trigger: GCCGGAGTTGCTGGGGAGGCAGGCCCACCCCTGGAC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAGGGATGGCACCACACTaGGGCAGCCCACACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARGMAPH*GSPHWG
Trigger: GCCCCAGTGTGGGCTGCCCCAGTGTGGTGCCATCCC...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGGACAAGCTTGGGAATaGGGCGGGACCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQGQAWE*GGTCGW
Trigger: CCAGCCGCAGGTCCCGCCGCATTCCCAAGCTTGTCC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAGGACAAGCTTGGGAATaGGGCGGGACCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARGQAWE*GGTCGW
Trigger: CCAGCCGCAGGTCCCGCCGCATTCCCAAGCTTGTCC...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGGGCTCAGTCCGGCCTaGACGCTTCTCCAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQGLSPA*TLLQPV
Trigger: TACCGGCTGGAGAAGCGTCCAGGCCGGACTGAGCCC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGTTCCCTGTCCAGGGGTaGGCCTGCCTCCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQFPVQG*ACLPSN
Trigger: GTTGCTGGGGAGGCAGGCCCACCCCTGGACAGGGAA...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAAGGCCACCACCGCGTaGGAGCAGCTGGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQKATTA*EQLDRV
Trigger: TACCCTGTCCAGCTGCTCTCACGCGGTGGTGGCCTT...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGATCCGGCCACTCCTCCTaGCCTGCTGCTGGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRSGHSS*PAAGAY
Trigger: GTAAGCCCCAGCAGCAGGGCAGGAGGAGTGGCCGGA...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAATGCGGCGGGACCTaGGGCTGGACAGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQECGGT*GWTAAH
Trigger: GTGAGCTGCTGTCCAGCCGCAGGTCCCGCCGCATTC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGAGCCAAAGCGCCTGCTaGCATCTTCCCCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSESQSAC*HLPQSA
Trigger: TGCTGACTGGGGAAGATGGCAGCAGGCGCTTTGGCT...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGGCGGGACCTGCGGCTaGACAGCAGCTCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQGGTCG*TAAHLW
Trigger: CCACAAGTGAGCTGCTGTCCAGCCGCAGGTCCCGCC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGGTGCCTCCGGTTCCATaGGTGATGCTGGAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEVPPVP*VMLEFL
Trigger: CAAGAACTCCAGCATCACTCATGGAACCGGAGGCAC...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAGACTCATCCTGGGTaGAGCCTCTCGGCGACCTTC +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQQTHPG*SLSATF
Trigger: GAAGGTCGCCGAGAGGCTTCACCCAGGATGAGTCTG...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATATGGGGCAGCCCTCACTaGCCGACCACTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIWGSPH*PTTRSQ
Trigger: CTGGGAGCGAGTGGTCGGTCAGTGAGGGCTGCCCCA...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGGATGGCAGGCTCAGCTaGGCCAACAGCATCATGTCA +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEDGRLS*ANSIMS
Trigger: TGACATGATGCTGTTGGCTCAGCTGAGCCTGCCATC...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAAAGGCCACCACCGCGTaGGAGCAGCTGGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQKATTA*EQLDRV
Trigger: TACCCTGTCCAGCTGCTCTCACGCGGTGGTGGCCTT...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAAAGGCCACCACCGCGTaGGAGCAGCTGGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRKATTA*EQLDRV
Trigger: TACCCTGTCCAGCTGCTCTCACGCGGTGGTGGCCTT...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGACGGAAGGCCTCTCGCTaGAAAGCCCTTTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARRKASR*KALSPF
Trigger: GAAGGGGGAAAGGGCTTTTCAGCGAGAGGCCTTCCG...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCGGAAGGCCTCTCGCTaGAAAGCCCTTTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQRKASR*KALSPF
Trigger: GAAGGGGGAAAGGGCTTTTCAGCGAGAGGCCTTCCG...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGTCTTTCCTGATGCCATaGCCCCTGAGCAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSESFLMP*PLSKAL
Trigger: CAGTGCCTTGCTCAGGGGGCATGGCATCAGGAAAGA...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCTCCTCCTGCCCTGCTaGTGGGGCTTACACTTGCAG +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQLLLPC*WGLHLQ
Trigger: CTGCAAGTGTAAGCCCCAGCAGCAGGGCAGGAGGAG...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGGACTTCAGGGACAGCTaGATGGGTGGGTGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEDFRDS*MGGWLY
Trigger: GTACAACCACCCACCCATGCAGCTGTCCCTGAAGTC...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAGGAATGGGGTGCTCTaGGCAAGGGGGAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQRNGVL*ARGRQA
Trigger: TGCTTGCCTCCCCCTTGCCCAGAGCACCCCATTCCT...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGACCACTGCGCAGGGACTaGCTGTTGGACTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARPLRRD*LLDFRD
Trigger: GTCCCTGAAGTCCAACAGCCAGTCCCTGCGCAGTGG...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGCCACTGCGCAGGGACTaGCTGTTGGACTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQPLRRD*LLDFRD
Trigger: GTCCCTGAAGTCCAACAGCCAGTCCCTGCGCAGTGG...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAACCAGCGTCCGATAGCTaGGCGCTCGCTTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQPASDS*ALASAS
Trigger: CGATGCTGAAGCGAGCGCCCAGCTATCGGACGCTGG...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGGGTTTTCCCTGGGGCTaGAAAGGGCGATTCCATGAG +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEGFPWG*KGRFHE
Trigger: CTCATGGAATCGCCCTTTCCAGCCCCAGGGAAAACC...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGTGGAGGTGGAGAGACTaGCTGAGACCTGCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQWRWRD*LRPAQR
Trigger: ACGCTGAGCAGGTCTCAGTCAGTCTCTCCACCTCCA...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACGGAAGGCCTCTCGCTaGAAAGCCCTTTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRRKASR*KALSPF
Trigger: GAAGGGGGAAAGGGCTTTTCAGCGAGAGGCCTTCCG...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAGGGCTCGGGTACCAGTaGAACTCAGCAAGACACTCC +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARGLGYQ*NSARHS
Trigger: GGAGTGTCTTGCTGAGTTGCACTGGTACCCGAGCCC...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAATCCAGGAAGTGCCTCTaGCTCCTCCTCTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQSRKCL*LLLCLG
Trigger: CCCGAGACAGAGGAGGAGGCAGAGGCACTTCCTGGA...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACTCCTCCTGCCCTGCTaGTGGGGCTTACACTTGCAG +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRLLLPC*WGLHLQ
Trigger: CTGCAAGTGTAAGCCCCAGCAGCAGGGCAGGAGGAG...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACTGACCAGTTCCCACTaGGCAGGGACTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRLTSSH*AGTGCW
Trigger: CCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAG...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAACTGACCAGTTCCCACTaGGCAGGGACTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQLTSSH*AGTGCW
Trigger: CCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAG...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAGAATGCGGCGGGACCTaGGGCTGGACAGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIECGGT*GWTAAH
Trigger: GTGAGCTGCTGTCCAGCCGCAGGTCCCGCCGCATTC...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGGACAAGCTTGGGAATaGGGCGGGACCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTGQAWE*GGTCGW
Trigger: CCAGCCGCAGGTCCCGCCGCATTCCCAAGCTTGTCC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGAGCCAAAGCGCCTGCTaGCATCTTCCCCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQSQSAC*HLPQSA
Trigger: TGCTGACTGGGGAAGATGGCAGCAGGCGCTTTGGCT...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGTGGAGGCCACAGACTTaGGGAAGGCCTCTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQWRPQT*GRPLAE
Trigger: TTCAGCGAGAGGCCTTCCGCAAGTCTGTGGCCTCCA...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGGGAACTTCATCTTGTTaGCCAGGCCCCGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEGTSSC*PGPGET
Trigger: AGTTTCTCCGGGGCCTGGGCAACAAGATGAAGTTCC...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTGGGATGGCACCACACTaGGGCAGCCCACACTGGGGC +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTGMAPH*GSPHWG
Trigger: GCCCCAGTGTGGGCTGCCCCAGTGTGGTGCCATCCC...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAGGGCTCAGTCCGGCCTaGACGCTTCTCCAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIGLSPA*TLLQPV
Trigger: TACCGGCTGGAGAAGCGTCCAGGCCGGACTGAGCCC...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGGCGGGACCTGCGGCTaGACAGCAGCTCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTGGTCG*TAAHLW
Trigger: CCACAAGTGAGCTGCTGTCCAGCCGCAGGTCCCGCC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCGCTTCAGCATCGACTaGATGTGGACCAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQRFSID*MWTKRW
Trigger: CCAGCGCTTGGTCCACATCCAGTCGATGCTGAAGCG...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGACACAGTACACCTCTaGCAACCGAGGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQDTVHL*QPRPFP
Trigger: GGGAAAGGGCCTCGGTTGCCAGAGGTGTACTGTGTC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGTGCCTCCGGTTCCATaGGTGATGCTGGAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQVPPVP*VMLEFL
Trigger: CAAGAACTCCAGCATCACTCATGGAACCGGAGGCAC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAGTGCCTCCGGTTCCATaGGTGATGCTGGAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARVPPVP*VMLEFL
Trigger: CAAGAACTCCAGCATCACTCATGGAACCGGAGGCAC...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAATGGAGGTGGAGAGACTaGCTGAGACCTGCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQWRWRD*LRPAQR
Trigger: ACGCTGAGCAGGTCTCAGTCAGTCTCTCCACCTCCA...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAGGGGTACCTGCAGGCTaGGGTTTCACTGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRGVPAG*GFTVTE
Trigger: CTCAGTGACAGTGAAACCTCAGCCTGCAGGTACCCC...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGTTCACTGCTGTATTCTaGCACAGGGAGCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEFTAVF*HREPVL
Trigger: AAGGACTGGCTCCCTGTGTCAGAATACAGCAGTGAA...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAGACTTCAGGGACAGCTaGATGGGTGGGTGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARDFRDS*MGGWLY
Trigger: GTACAACCACCCACCCATGCAGCTGTCCCTGAAGTC...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTGAATGCGGCGGGACCTaGGGCTGGACAGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTECGGT*GWTAAH
Trigger: GTGAGCTGCTGTCCAGCCGCAGGTCCCGCCGCATTC...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAATGGAGGCCACAGACTTaGGGAAGGCCTCTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQWRPQT*GRPLAE
Trigger: TTCAGCGAGAGGCCTTCCGCAAGTCTGTGGCCTCCA...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGATTCGGAGGCAGCAGCTaGGGACTGGAGCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARFGGSS*GLELFP
Trigger: TGGAAATAGCTCCAGTCCCCAGCTGCTGCCTCCGAA...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGTGGAGCAGCAGGTGTaGGTGAAGGAGGTAGACCAT +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQVEQQV*VKEVDH
Trigger: ATGGTCTACCTCCTTCACCCACACCTGCTGCTCCAC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAGTGGAGCAGCAGGTGTaGGTGAAGGAGGTAGACCAT +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARVEQQV*VKEVDH
Trigger: ATGGTCTACCTCCTTCACCCACACCTGCTGCTCCAC...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGGAGGGATACAGGGATTaGAGACTGGATGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEEGYRD*RLDASS
Trigger: TGAGGATGCATCCAGTCTCCAATCCCTGTATCCCTC...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAGCAGGGACTGGCTGTTaGACTTCAGGGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRAGTGC*TSGTAA
Trigger: TGCAGCTGTCCCTGAAGTCCAACAGCCAGTCCCTGC...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGCAGGGACTGGCTGTTaGACTTCAGGGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQAGTGC*TSGTAA
Trigger: TGCAGCTGTCCCTGAAGTCCAACAGCCAGTCCCTGC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAAGCATCGACTGGATGTaGACCAAGCGCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQSIDWM*TKRWVW
Trigger: CCACACCCAGCGCTTGGTCCACATCCAGTCGATGCT...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAACGCTTCAGCATCGACTaGATGTGGACCAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQRFSID*MWTKRW
Trigger: CCAGCGCTTGGTCCACATCCAGTCGATGCTGAAGCG...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAACGCTTCAGCATCGACTaGATGTGGACCAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQRFSID*MWTKRW
Trigger: CCAGCGCTTGGTCCACATCCAGTCGATGCTGAAGCG...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACCAGCGTCCGATAGCTaGGCGCTCGCTTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIPASDS*ALASAS
Trigger: CGATGCTGAAGCGAGCGCCCAGCTATCGGACGCTGG...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGGTTTTCCCTGGGGCTaGAAAGGGCGATTCCATGAG +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQGFPWG*KGRFHE
Trigger: CTCATGGAATCGCCCTTTCCAGCCCCAGGGAAAACC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGCGACCTTCCCATGCTaGGATCTTCTCTCGGATACC +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQATFPC*DLLSDT
Trigger: GGTATCCGAGAGAAGATCTCAGCATGGGAAGGTCGC...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAATCAAAGGTCTTTTCTaGGCTGCAGGGGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARIKGLF*AAGGWH
Trigger: GTGCCATCCCCCTGCAGCTCAGAAAAGACCTTTGAT...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGATTCTGTGACTTCCGGTaGCCACGCATGTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARFCDFR*PRMSFL
Trigger: CAAGAAGGACATGCGTGGTCACCGGAAGTCACAGAA...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGCTGGGTGTGGGCTTTaGACCTGTCATCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQAGCGL*TCHQSH
Trigger: GTGACTCTGATGACAGGTTCAAAGCCCACACCCAGC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGCTGGGTGTGGGCTTTaGACCTGTCATCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQAGCGL*TCHQSH
Trigger: GTGACTCTGATGACAGGTTCAAAGCCCACACCCAGC...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGGAGATGGCTTCTTCTTaGGGGACACAACCACAAAGT +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEEMASS*GTQPQS
Trigger: ACTTTGTGGTTGTGTCCCTCAAGAAGAAGCCATCTC...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGAAGATTCGGATAAGCTaGCGCACACTGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQKIRIS*RTLRQV
Trigger: CACCTGCCTCAGTGTGCGTCAGCTTATCCGAATCTT...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACATCCAGGAAGTGCCTCTaGCTCCTCCTCTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTSRKCL*LLLCLG
Trigger: CCCGAGACAGAGGAGGAGGCAGAGGCACTTCCTGGA...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGTCCCGTCCAGGAAGTaGCTCTGCCTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTVPSRK*LCLLLC
Trigger: ACAGAGGAGGAGGCAGAGGCACTTCCTGGACGGGAC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAATCTTTCCTGATGCCATaGCCCCTGAGCAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQSFLMP*PLSKAL
Trigger: CAGTGCCTTGCTCAGGGGGCATGGCATCAGGAAAGA...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACCACTCCTCCTGCCCTaGTGCTGGGGCTTACACTTG +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIPLLLP*CWGLHL
Trigger: CAAGTGTAAGCCCCAGCAGCAGGGCAGGAGGAGTGG...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGTCCAGGGGTGGGCCTaGCTCCCCAGCAACTCCGGC +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRVQGWA*LPSNSG
Trigger: GCCGGAGTTGCTGGGGAGGCAGGCCCACCCCTGGAC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGGGATTGGAGACTGGATaGATCCTCAAACTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEGLETG*ILKLEG
Trigger: TCCTTCGAGTTTGAGGATGCATCCAGTCTCCAATCC...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGGAGTTCTCAGACAGTTaGTGGGATTTTCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEEFSDS*WDFRPA
Trigger: AGCTGGACGAAAATCCCAGCAACTGTCTGAGAACTC...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGATGTCATCATGGCTATaGCTCTTGGGTAATCGTGGC +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEMSSWL*LLGNRG
Trigger: GCCACGATTACCCAAGAGGCATAGCCATGATGACAT...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGTTTGAGCCTTTCTTCTaGCTCCCGCATCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEFEPFF*LPHLFG
Trigger: ACCAAACAGATGCGGGAGGCAGAAGAAAGGCTCAAA...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGAATAGCCAAAGCGCCTaGTGCCATCTTCCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQNSQSA*CHLPQS
Trigger: TGACTGGGGAAGATGGCAGCAGGCGCTTTGGCTATT...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAAATAGCCAAAGCGCCTaGTGCCATCTTCCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARNSQSA*CHLPQS
Trigger: TGACTGGGGAAGATGGCAGCAGGCGCTTTGGCTATT...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACTTGCAGTTCCTGTTaGCTCCTCCAAGGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQTCSSC*LLQGAQ
Trigger: TTGGGCACCTTGGAGGAGCCAACAGGAACTGCAAGT...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGACTTGCAGTTCCTGTTaGCTCCTCCAAGGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQTCSSC*LLQGAQ
Trigger: TTGGGCACCTTGGAGGAGCCAACAGGAACTGCAAGT...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCTTCCCTGTCCAGGGGTaGGCCTGCCTCCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRFPVQG*ACLPSN
Trigger: GTTGCTGGGGAGGCAGGCCCACCCCTGGACAGGGAA...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGGGTCTCTGACTTCATaGAAGCACTGCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQGSLTS*KHCLPC
Trigger: ACAGGGAAGGCAGTGCTTCCATGAAGTCAGAGACCC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGAGGTACGCTTGGGTTTaGGAACAGGGTTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQRYAWV*EQGSQL
Trigger: CAGCTGTGAACCCTGTTCCCAAACCCAAGCGTACCT...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGGTTTTCCCTGGGGCTaGAAAGGGCGATTCCATGAG +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQGFPWG*KGRFHE
Trigger: CTCATGGAATCGCCCTTTCCAGCCCCAGGGAAAACC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGGCTCAAAGAGGCCCTTaGCTCGACACTTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQAQRGP*LDTSLA
Trigger: AGCTAAGGAAGTGTCGAGCCAAGGGCCTCTTTGAGC...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGAGGTTTCACTGTCACTaGGTGGGTAGATGGGACTTC +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQRFHCH*VGRWDF
Trigger: GAAGTCCCATCTACCCACTCAGTGACAGTGAAACCT...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGATTCACTGCTGTATTCTaGCACAGGGAGCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARFTAVF*HREPVL
Trigger: AAGGACTGGCTCCCTGTGTCAGAATACAGCAGTGAA...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAACGTCCATCTGTCGGATaGATCGGTCAGATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQRPSVG*IGQIPD
Trigger: ATCTGGGATCTGACCGATTCATCCGACAGATGGACG...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACGTCCATCTGTCGGATaGATCGGTCAGATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRRPSVG*IGQIPD
Trigger: ATCTGGGATCTGACCGATTCATCCGACAGATGGACG...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGACCGGATAAACACCTCTaGCACAAGTCCATTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARPDKHL*HKSIEG
Trigger: ACCCTCAATGGACTTGTGTCAGAGGTGTTTATCCGG...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCCGGATAAACACCTCTaGCACAAGTCCATTGAGGGT +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQPDKHL*HKSIEG
Trigger: ACCCTCAATGGACTTGTGTCAGAGGTGTTTATCCGG...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGCTCCCTGTCTTGGATaGAGCCAGCAAACATCTGAG +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQAPCLG*SQQTSE
Trigger: CTCAGATGTTTGCTGGCTTCATCCAAGACAGGGAGC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAGCTCCCTGTCTTGGATaGAGCCAGCAAACATCTGAG +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRAPCLG*SQQTSE
Trigger: CTCAGATGTTTGCTGGCTTCATCCAAGACAGGGAGC...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGGGCTCGGGTACCAGTaGAACTCAGCAAGACACTCC +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTGLGYQ*NSARHS
Trigger: GGAGTGTCTTGCTGAGTTGCACTGGTACCCGAGCCC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGGACTCCACATCCTGTaGAAAGAGTCCAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQGLHIL*KESKEF
Trigger: GAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTCTGACCAGTTCCCACTaGGCAGGGACTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTLTSSH*AGTGCW
Trigger: CCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAG...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAGCCAAAGCGCCTGCTaGCATCTTCCCCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTSQSAC*HLPQSA
Trigger: TGCTGACTGGGGAAGATGGCAGCAGGCGCTTTGGCT...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAAGCCAAAGCGCCTGCTaGCATCTTCCCCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNISQSAC*HLPQSA
Trigger: TGCTGACTGGGGAAGATGGCAGCAGGCGCTTTGGCT...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATATGGAGGCCACAGACTTaGGGAAGGCCTCTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIWRPQT*GRPLAE
Trigger: TTCAGCGAGAGGCCTTCCGCAAGTCTGTGGCCTCCA...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAGGAACTTCATCTTGTTaGCCAGGCCCCGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRGTSSC*PGPGET
Trigger: AGTTTCTCCGGGGCCTGGGCAACAAGATGAAGTTCC...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACACACACAGACTCATCCTaGGTGAAGCCTCTCGGCGAC +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTHTDSS*VKPLGD
Trigger: GTCGCCGAGAGGCTTCACCCAGGATGAGTCTGTGTG...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACACACAGACTCATCCTaGGTGAAGCCTCTCGGCGAC +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIHTDSS*VKPLGD
Trigger: GTCGCCGAGAGGCTTCACCCAGGATGAGTCTGTGTG...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGCTTGTTCGATCTTCTaGATCCGGCTCAGCACTGCT +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQACSIF*IRLSTA
Trigger: AGCAGTGCTGAGCCGGATCCAGAAGATCGAACAAGC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGGGTCTCTGACTTCATaGAAGCACTGCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQGSLTS*KHCLPC
Trigger: ACAGGGAAGGCAGTGCTTCCATGAAGTCAGAGACCC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAGCAGCAGCTGGGGACTaGAGCTATTTCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIAAAGD*SYFQGS
Trigger: AGACCCCTGGAAATAGCTCCAGTCCCCAGCTGCTGC...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAAGCTGCATGGGTGGGTaGTTGTACTTCCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRSCMGG*LYFLSW
Trigger: CCAAGACAGGAAGTACAACCACCCACCCATGCAGCT...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTCCACTGCGCAGGGACTaGCTGTTGGACTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTPLRRD*LLDFRD
Trigger: GTCCCTGAAGTCCAACAGCCAGTCCCTGCGCAGTGG...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAAGCATCGACTGGATGTaGACCAAGCGCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNISIDWM*TKRWVW
Trigger: CCACACCCAGCGCTTGGTCCACATCCAGTCGATGCT...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGGTAGGTGTTCCGAGATaGCTTCTTCTTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQVGVPR*LLLEGH
Trigger: GTGTCCCTCAAGAAGAAGCCATCTCGGAACACCTAC...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGTAGGTGTTCCGAGATaGCTTCTTCTTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQVGVPR*LLLEGH
Trigger: GTGTCCCTCAAGAAGAAGCCATCTCGGAACACCTAC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAACAGGGAGCCAGTCCTTaGCATCCGGAAAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQQGASP*HPESKT
Trigger: AGTTTTGCTTTCCGGATGCCAAGGACTGGCTCCCTG...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGATCACTGTCAGAGTCCTaGGAGATGAGCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARSLSES*EMSSLF
Trigger: GAAGAGTGAGCTCATCTCCCAGGACTCTGACAGTGA...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAGCTCAAAGAGGCCCTTaGCTCGACACTTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRAQRGP*LDTSLA
Trigger: AGCTAAGGAAGTGTCGAGCCAAGGGCCTCTTTGAGC...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGTCCTCCGGAGGCCTTTaGAATCAAAGGTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQSSGGL*NQRSFL
Trigger: CAGAAAAGACCTTTGATTTCAAAGGCCTCCGGAGGA...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGATGGCAGGCTCAGCTaGGCCAACAGCATCATGTCA +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTDGRLS*ANSIMS
Trigger: TGACATGATGCTGTTGGCTCAGCTGAGCCTGCCATC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGTTCTCATCTCTCAATaGTGCTGTCTCAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQVLISQ*CCLKAG
Trigger: TCCAGCCTTGAGACAGCATCATTGAGAGATGAGAAC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGGTTCTCATCTCTCAATaGTGCTGTCTCAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQVLISQ*CCLKAG
Trigger: TCCAGCCTTGAGACAGCATCATTGAGAGATGAGAAC...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGCTGGGTGTGGGCTTTaGACCTGTCATCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTAGCGL*TCHQSH
Trigger: GTGACTCTGATGACAGGTTCAAAGCCCACACCCAGC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAGAGATGGCTTCTTCTTaGGGGACACAACCACAAAGT +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKAREMASS*GTQPQS
Trigger: ACTTTGTGGTTGTGTCCCTCAAGAAGAAGCCATCTC...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGGCGTTCCAACAGCAATaGGGCAAAGATTCGGATAAG +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQAFQQQ*GKDSDK
Trigger: CTTATCCGAATCTTTGCCTCATTGCTGTTGGAACGC...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAGGATTGGAGACTGGATaGATCCTCAAACTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARGLETG*ILKLEG
Trigger: TCCTTCGAGTTTGAGGATGCATCCAGTCTCCAATCC...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACGAATGCGGCGGGACCTaGGGCTGGACAGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYECGGT*GWTAAH
Trigger: GTGAGCTGCTGTCCAGCCGCAGGTCCCGCCGCATTC...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAATACTGTTCCACTCTCTaGTCAAAGAGGCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQYCSTL*SKRPLA
Trigger: AGCCAAGGGCCTCTTTGAGCAGAGAGTGGAACAGTA...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACATCCTTGAGGAGCACCTaGGATTTAGAGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTSLRST*DLEWLG
Trigger: CCCCAGCCACTCTAAATCCCAGGTGCTCCTCAAGGA...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGACAGGGATTGGAGACTaGATGCATCCTCAAACTCGA +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQTGIGD*MHPQTR
Trigger: TCGAGTTTGAGGATGCATCCAGTCTCCAATCCCTGT...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAACAGGGATTGGAGACTaGATGCATCCTCAAACTCGA +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARTGIGD*MHPQTR
Trigger: TCGAGTTTGAGGATGCATCCAGTCTCCAATCCCTGT...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGTTCTCAGACAGTTGCTaGGATTTTCGTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQFSDSC*DFRPAL
Trigger: GAGAGCTGGACGAAAATCCCAGCAACTGTCTGAGAA...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCCCACTGCGCAGGGACTaGCTGTTGGACTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRPLRRD*LLDFRD
Trigger: GTCCCTGAAGTCCAACAGCCAGTCCCTGCGCAGTGG...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAATCGTGGCAAACGATaGCTCTTCCTTTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQNRGKR*LFLSDQ
Trigger: CTGGTCAGAAAGGAAGAGCCATCGTTTGCCACGATT...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCATGGCTATGCCTCTTaGGTAATCGTGGCAAACGAT +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQHGYAS*VIVAND
Trigger: ATCGTTTGCCACGATTACCCAAGAGGCATAGCCATG...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACGGCGGGACCTGCGGCTaGACAGCAGCTCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYGGTCG*TAAHLW
Trigger: CCACAAGTGAGCTGCTGTCCAGCCGCAGGTCCCGCC...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGTAGGTGTTCCGAGATaGCTTCTTCTTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQVGVPR*LLLEGH
Trigger: GTGTCCCTCAAGAAGAAGCCATCTCGGAACACCTAC...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAACAACCAGGAAAGGGGTaGGACAGCAGACAATGTCAA +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQQPGKG*DSRQCQ
Trigger: TTGACATTGTCTGCTGTCCCACCCCTTTCCTGGTTG...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAGCAGCTCCTTCAGTTTaGGAAGGGAGCTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIAAPSV*EGSWRA
Trigger: TGCTCTCCAGCTCCCTTCCCAAACTGAAGGAGCTGC...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGCAGCTCCTTCAGTTTaGGAAGGGAGCTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTAAPSV*EGSWRA
Trigger: TGCTCTCCAGCTCCCTTCCCAAACTGAAGGAGCTGC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGATCACTGTCAGAGTCCTaGGAGATGAGCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRSLSES*EMSSLF
Trigger: GAAGAGTGAGCTCATCTCCCAGGACTCTGACAGTGA...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAATCACTGTCAGAGTCCTaGGAGATGAGCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQSLSES*EMSSLF
Trigger: GAAGAGTGAGCTCATCTCCCAGGACTCTGACAGTGA...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGTTCTCATCTCTCAATaGTGCTGTCTCAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQVLISQ*CCLKAG
Trigger: TCCAGCCTTGAGACAGCATCATTGAGAGATGAGAAC...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGCGTTCCAACAGCAATaGGGCAAAGATTCGGATAAG +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQAFQQQ*GKDSDK
Trigger: CTTATCCGAATCTTTGCCTCATTGCTGTTGGAACGC...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGCGTTCCAACAGCAATaGGGCAAAGATTCGGATAAG +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQAFQQQ*GKDSDK
Trigger: CTTATCCGAATCTTTGCCTCATTGCTGTTGGAACGC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAATGTCATCATGGCTATaGCTCTTGGGTAATCGTGGC +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQMSSWL*LLGNRG
Trigger: GCCACGATTACCCAAGAGGCATAGCCATGATGACAT...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGATTTGAGCCTTTCTTCTaGCTCCCGCATCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRFEPFF*LPHLFG
Trigger: ACCAAACAGATGCGGGAGGCAGAAGAAAGGCTCAAA...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGTGCTCCAGAGCAGCTTaGAACTTTCTAGGTAACAGT +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQCSRAA*NFLGNS
Trigger: ACTGTTACCTAGAAAGTTGCAAGCTGCTCTGGAGCA...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGATGCTCCAGAGCAGCTTaGAACTTTCTAGGTAACAGT +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARCSRAA*NFLGNS
Trigger: ACTGTTACCTAGAAAGTTGCAAGCTGCTCTGGAGCA...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAGGAACTTCATCTTGTTaGCCAGGCCCCGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIGTSSC*PGPGET
Trigger: AGTTTCTCCGGGGCCTGGGCAACAAGATGAAGTTCC...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAATTCACTGTCACTGAGTaGGTAGATGGGACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQFTVTE*VDGTSW
Trigger: CCAAGAAGTCCCATCTACCCACTCAGTGACAGTGAA...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAACACCTTCTACATCCTaGACTGCACCCTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNITPSTS*TAPWTV
Trigger: GACTGTCCAGGGTGCAGTCCAGGATGTAGAAGGTGT...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTTTCGGAGGCAGCAGCTaGGGACTGGAGCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTFGGSS*GLELFP
Trigger: TGGAAATAGCTCCAGTCCCCAGCTGCTGCCTCCGAA...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAGGTACGCTTGGGTTTaGGAACAGGGTTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTRYAWV*EQGSQL
Trigger: CAGCTGTGAACCCTGTTCCCAAACCCAAGCGTACCT...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAAATCGTGGCAAACGATaGCTCTTCCTTTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQNRGKR*LFLSDQ
Trigger: CTGGTCAGAAAGGAAGAGCCATCGTTTGCCACGATT...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAACATGGCTATGCCTCTTaGGTAATCGTGGCAAACGAT +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQHGYAS*VIVAND
Trigger: ATCGTTTGCCACGATTACCCAAGAGGCATAGCCATG...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCAGCATCGACTGGATGTaGACCAAGCGCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRSIDWM*TKRWVW
Trigger: CCACACCCAGCGCTTGGTCCACATCCAGTCGATGCT...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCCGCTTCAGCATCGACTaGATGTGGACCAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRRFSID*MWTKRW
Trigger: CCAGCGCTTGGTCCACATCCAGTCGATGCTGAAGCG...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGACCAGCGTCCGATAGCTaGGCGCTCGCTTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRPASDS*ALASAS
Trigger: CGATGCTGAAGCGAGCGCCCAGCTATCGGACGCTGG...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAACTTAGCTCCCTGTCTTaGATGAAGCCAGCAAACATC +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQLSSLS*MKPANI
Trigger: GATGTTTGCTGGCTTCATCCAAGACAGGGAGCTAAG...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGACAGACTCATCCTGGGTaGAGCCTCTCGGCGACCTTC +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRQTHPG*SLSATF
Trigger: GAAGGTCGCCGAGAGGCTTCACCCAGGATGAGTCTG...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTATCAAAGGTCTTTTCTaGGCTGCAGGGGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTIKGLF*AAGGWH
Trigger: GTGCCATCCCCCTGCAGCTCAGAAAAGACCTTTGAT...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGATCCAAACTTGGGTTaGCTCTCAGTACCATTCTCA +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQDPNLG*LSVPFS
Trigger: TGAGAATGGTACTGAGAGTCAACCCAAGTTTGGATC...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGATCCAAACTTGGGTTaGCTCTCAGTACCATTCTCA +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQDPNLG*LSVPFS
Trigger: TGAGAATGGTACTGAGAGTCAACCCAAGTTTGGATC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACATTCACTGCTGTATTCTaGCACAGGGAGCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTFTAVF*HREPVL
Trigger: AAGGACTGGCTCCCTGTGTCAGAATACAGCAGTGAA...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTAAGATTCGGATAAGCTaGCGCACACTGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTKIRIS*RTLRQV
Trigger: CACCTGCCTCAGTGTGCGTCAGCTTATCCGAATCTT...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGTATCTGCTACAAAAATaGCTCTGCGTTCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQYLLQK*LCVPTA
Trigger: TGCTGTTGGAACGCAGAGTCATTTTTGTAGCAGATA...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGATATCTGCTACAAAAATaGCTCTGCGTTCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARYLLQK*LCVPTA
Trigger: TGCTGTTGGAACGCAGAGTCATTTTTGTAGCAGATA...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTGCTCCCTGTCTTGGATaGAGCCAGCAAACATCTGAG +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTAPCLG*SQQTSE
Trigger: CTCAGATGTTTGCTGGCTTCATCCAAGACAGGGAGC...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCAGTGGCTGGGGTACCTaGAGGCTGAGGTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRSGWGT*RLRFHC
Trigger: ACAGTGAAACCTCAGCCTGCAGGTACCCCAGCCACT...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCACTCAGAGAAGGTCCTaGTCATCCTCCGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRTQRRS*SSSGGL
Trigger: AAGGCCTCCGGAGGATGAGCAGGACCTTCTCTGAGT...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGTCCCGTCCAGGAAGTaGCTCTGCCTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRVPSRK*LCLLLC
Trigger: ACAGAGGAGGAGGCAGAGGCACTTCCTGGACGGGAC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCTGACCAGTTCCCACTaGGCAGGGACTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYLTSSH*AGTGCW
Trigger: CCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAG...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTAATAGCCAAAGCGCCTaGTGCCATCTTCCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTNSQSA*CHLPQS
Trigger: TGACTGGGGAAGATGGCAGCAGGCGCTTTGGCTATT...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAGGTACTGAGCTTATCTaGTACAAAAATGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARGTELI*YKNDSA
Trigger: CGCAGAGTCATTTTTGTAGCAGATAAGCTCAGTACC...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGGTACTGAGCTTATCTaGTACAAAAATGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQGTELI*YKNDSA
Trigger: CGCAGAGTCATTTTTGTAGCAGATAAGCTCAGTACC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATATACTGTTCCACTCTCTaGTCAAAGAGGCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIYCSTL*SKRPLA
Trigger: AGCCAAGGGCCTCTTTGAGCAGAGAGTGGAACAGTA...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCTCCTTGAGGAGCACCTaGGATTTAGAGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRSLRST*DLEWLG
Trigger: CCCCAGCCACTCTAAATCCCAGGTGCTCCTCAAGGA...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACAGGAATGGGGTGCTCTaGGCAAGGGGGAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYRNGVL*ARGRQA
Trigger: TGCTTGCCTCCCCCTTGCCCAGAGCACCCCATTCCT...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAGAGGGATACAGGGATTaGAGACTGGATGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIEGYRD*RLDASS
Trigger: TGAGGATGCATCCAGTCTCCAATCCCTGTATCCCTC...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGAGGGATACAGGGATTaGAGACTGGATGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTEGYRD*RLDASS
Trigger: TGAGGATGCATCCAGTCTCCAATCCCTGTATCCCTC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATATTGTACTTCCTGTCTTaGGGACTCCACATCCTGTGC +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNILYFLS*GLHILC
Trigger: GCACAGGATGTGGAGTCCCCAAGACAGGAAGTACAA...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACATTGTACTTCCTGTCTTaGGGACTCCACATCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTLYFLS*GLHILC
Trigger: GCACAGGATGTGGAGTCCCCAAGACAGGAAGTACAA...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTAGCTGCATGGGTGGGTaGTTGTACTTCCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTSCMGG*LYFLSW
Trigger: CCAAGACAGGAAGTACAACCACCCACCCATGCAGCT...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAGCATCATGTCATCATaGCTATGCCTCTTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQSIMSS*LCLLGN
Trigger: ATTACCCAAGAGGCATAGCCATGATGACATGATGCT...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAAGCATCATGTCATCATaGCTATGCCTCTTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARSIMSS*LCLLGN
Trigger: ATTACCCAAGAGGCATAGCCATGATGACATGATGCT...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATATCACTGTCAGAGTCCTaGGAGATGAGCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNISLSES*EMSSLF
Trigger: GAAGAGTGAGCTCATCTCCCAGGACTCTGACAGTGA...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTAGGTTTCACTGTCACTaGGTGGGTAGATGGGACTTC +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTRFHCH*VGRWDF
Trigger: GAAGTCCCATCTACCCACTCAGTGACAGTGAAACCT...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACGGGGTACCTGCAGGCTaGGGTTTCACTGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYGVPAG*GFTVTE
Trigger: CTCAGTGACAGTGAAACCTCAGCCTGCAGGTACCCC...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAGTTCTCATCTCTCAATaGTGCTGTCTCAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIVLISQ*CCLKAG
Trigger: TCCAGCCTTGAGACAGCATCATTGAGAGATGAGAAC...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGAGATGGCTTCTTCTTaGGGGACACAACCACAAAGT +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTEMASS*GTQPQS
Trigger: ACTTTGTGGTTGTGTCCCTCAAGAAGAAGCCATCTC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTTTCACTGCTGTATTCTaGCACAGGGAGCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTFTAVF*HREPVL
Trigger: AAGGACTGGCTCCCTGTGTCAGAATACAGCAGTGAA...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAATATCTGCTACAAAAATaGCTCTGCGTTCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQYLLQK*LCVPTA
Trigger: TGCTGTTGGAACGCAGAGTCATTTTTGTAGCAGATA...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGGATTGGAGACTGGATaGATCCTCAAACTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTGLETG*ILKLEG
Trigger: TCCTTCGAGTTTGAGGATGCATCCAGTCTCCAATCC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGAGTTCTCAGACAGTTaGTGGGATTTTCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTEFSDS*WDFRPA
Trigger: AGCTGGACGAAAATCCCAGCAACTGTCTGAGAACTC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTGGACTCCACATCCTGTaGAAAGAGTCCAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTGLHIL*KESKEF
Trigger: GAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCC...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAAGAAAAGGTTTCACTaGTGTATTCTGACACAGGGA +
Preference number: 4 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQKKRFH*CILTQG
Trigger: TCCCTGTGTCAGAATACAGCAGTGAAACCTTTTCTT...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCAATAGCCAAAGCGCCTaGTGCCATCTTCCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRNSQSA*CHLPQS
Trigger: TGACTGGGGAAGATGGCAGCAGGCGCTTTGGCTATT...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAGGTACTGAGCTTATCTaGTACAAAAATGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRGTELI*YKNDSA
Trigger: CGCAGAGTCATTTTTGTAGCAGATAAGCTCAGTACC...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCGCTTGTTCGATCTTCTaGATCCGGCTCAGCACTGCT +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRACSIF*IRLSTA
Trigger: AGCAGTGCTGAGCCGGATCCAGAAGATCGAACAAGC...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGCAGCAGCTGGGGACTaGAGCTATTTCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRAAAGD*SYFQGS
Trigger: AGACCCCTGGAAATAGCTCCAGTCCCCAGCTGCTGC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGATTTTGGATCCAAACTTaGGTTGACTCTCAGTACCAT +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARFWIQT*VDSQYH
Trigger: ATGGTACTGAGAGTCAACCCAAGTTTGGATCCAAAA...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGACTTCTAAAGTGCTTTTaGATCCAAACTTGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: LASHQHPARLHPSSDKARLLKCF*IQTWVD
Trigger: GTCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAG...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGCAGGGACTGGCTGTTaGACTTCAGGGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRAGTGC*TSGTAA
Trigger: TGCAGCTGTCCCTGAAGTCCAACAGCCAGTCCCTGC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAAATCGTGGCAAACGATaGCTCTTCCTTTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNINRGKR*LFLSDQ
Trigger: CTGGTCAGAAAGGAAGAGCCATCGTTTGCCACGATT...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACACATGGCTATGCCTCTTaGGTAATCGTGGCAAACGAT +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTHGYAS*VIVAND
Trigger: ATCGTTTGCCACGATTACCCAAGAGGCATAGCCATG...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAAGCATCATGTCATCATaGCTATGCCTCTTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQSIMSS*LCLLGN
Trigger: ATTACCCAAGAGGCATAGCCATGATGACATGATGCT...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGATAGAGTTAATTCTTTaGACAAGCTTGGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQIELIL*TSLGMR
Trigger: CCGCATTCCCAAGCTTGTCCAAAGAATTAACTCTAT...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGACACAGTACACCTCTaGCAACCGAGGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRDTVHL*QPRPFP
Trigger: GGGAAAGGGCCTCGGTTGCCAGAGGTGTACTGTGTC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACTTAGCTCCCTGTCTTaGATGAAGCCAGCAAACATC +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNILSSLS*MKPANI
Trigger: GATGTTTGCTGGCTTCATCCAAGACAGGGAGCTAAG...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCGCTCAAAGAGGCCCTTaGCTCGACACTTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRAQRGP*LDTSLA
Trigger: AGCTAAGGAAGTGTCGAGCCAAGGGCCTCTTTGAGC...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACGCGACCTTCCCATGCTaGGATCTTCTCTCGGATACC +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYATFPC*DLLSDT
Trigger: GGTATCCGAGAGAAGATCTCAGCATGGGAAGGTCGC...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGATGGCAGGCTCAGCTaGGCCAACAGCATCATGTCA +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRDGRLS*ANSIMS
Trigger: TGACATGATGCTGTTGGCTCAGCTGAGCCTGCCATC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGCTGGGTGTGGGCTTTaGACCTGTCATCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRAGCGL*TCHQSH
Trigger: GTGACTCTGATGACAGGTTCAAAGCCCACACCCAGC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAACTGACACAAGTCCATTaGGGGTATTACATTCATCAT +
Preference number: 4 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQLTQVH*GYYIHH
Trigger: ATGATGAATGTAATACCCTCAATGGACTTGTGTCAG...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAAGGTCTTTTCTGAGCTaGAGGGGGATGGCACCACAC +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRRSFLS*RGMAPH
Trigger: GTGTGGTGCCATCCCCCTGCAGCTCAGAAAAGACCT...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAACTCAGAGAAGGTCCTaGTCATCCTCCGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRTQRRS*SSSGGL
Trigger: AAGGCCTCCGGAGGATGAGCAGGACCTTCTCTGAGT...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAACTTCATGGAAGCACTaGCTTCCCTGTCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRTSWKH*LPCPGV
Trigger: CACCCCTGGACAGGGAAGGCAGTGCTTCCATGAAGT...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTGAGTTCTCAGACAGTTaGTGGGATTTTCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTEFSDS*WDFRPA
Trigger: AGCTGGACGAAAATCCCAGCAACTGTCTGAGAACTC...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTATGTCATCATGGCTATaGCTCTTGGGTAATCGTGGC +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTMSSWL*LLGNRG
Trigger: GCCACGATTACCCAAGAGGCATAGCCATGATGACAT...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAATTTTGGATCCAAACTTaGGTTGACTCTCAGTACCAT +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQFWIQT*VDSQYH
Trigger: ATGGTACTGAGAGTCAACCCAAGTTTGGATCCAAAA...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAACTTCTAAAGTGCTTTTaGATCCAAACTTGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQLLKCF*IQTWVD
Trigger: GTCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAG...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACTTCTAAAGTGCTTTTaGATCCAAACTTGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRLLKCF*IQTWVD
Trigger: GTCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAG...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTCATGGCTATGCCTCTTaGGTAATCGTGGCAAACGAT +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTHGYAS*VIVAND
Trigger: ATCGTTTGCCACGATTACCCAAGAGGCATAGCCATG...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCCAACCAGGAAAGGGGTaGGACAGCAGACAATGTCAA +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRQPGKG*DSRQCQ
Trigger: TTGACATTGTCTGCTGTCCCACCCCTTTCCTGGTTG...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGCAGCTCCTTCAGTTTaGGAAGGGAGCTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRAAPSV*EGSWRA
Trigger: TGCTCTCCAGCTCCCTTCCCAAACTGAAGGAGCTGC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTCTTAGCTCCCTGTCTTaGATGAAGCCAGCAAACATC +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTLSSLS*MKPANI
Trigger: GATGTTTGCTGGCTTCATCCAAGACAGGGAGCTAAG...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGAGGTGGAGAGACTGACTaGGACCTGCTCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRGGETD*DLLSVS
Trigger: GGAGACGCTGAGCAGGTCTCAGTCAGTCTCTCCACC...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACATTTCCAGGGGTCTCTaGCTTCATGGAAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYISRGL*LHGSTA
Trigger: GGCAGTGCTTCCATGAAGTCAGAGACCCCTGGAAAT...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAATTTCCAGGGGTCTCTaGCTTCATGGAAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRISRGL*LHGSTA
Trigger: GGCAGTGCTTCCATGAAGTCAGAGACCCCTGGAAAT...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGATTCTGTGACTTCCGGTaGCCACGCATGTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRFCDFR*PRMSFL
Trigger: CAAGAAGGACATGCGTGGTCACCGGAAGTCACAGAA...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR TCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAAAGATTCGGATAAGCTaGCGCACACTGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRKIRIS*RTLRQV
Trigger: CACCTGCCTCAGTGTGCGTCAGCTTATCCGAATCTT...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATATATCTGCTACAAAAATaGCTCTGCGTTCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIYLLQK*LCVPTA
Trigger: TGCTGTTGGAACGCAGAGTCATTTTTGTAGCAGATA...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCGTCCATCTGTCGGATaGATCGGTCAGATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYRPSVG*IGQIPD
Trigger: ATCTGGGATCTGACCGATTCATCCGACAGATGGACG...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGCTCCCTGTCTTGGATaGAGCCAGCAAACATCTGAG +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRAPCLG*SQQTSE
Trigger: CTCAGATGTTTGCTGGCTTCATCCAAGACAGGGAGC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAACATTCTCTTCTAAAGTaGTTTTGGATCCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQHSLLK*FWIQTW
Trigger: CCAAGTTTGGATCCAAAAGCACTTTAGAAGAGAATG...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCGAGTTCTCAGACAGTTaGTGGGATTTTCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYREFSDS*WDFRPA
Trigger: AGCTGGACGAAAATCCCAGCAACTGTCTGAGAACTC...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTTGCTCCAGAGCAGCTTaGAACTTTCTAGGTAACAGT +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTCSRAA*NFLGNS
Trigger: ACTGTTACCTAGAAAGTTGCAAGCTGCTCTGGAGCA...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCACAGGGATTGGAGACTaGATGCATCCTCAAACTCGA +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRTGIGD*MHPQTR
Trigger: TCGAGTTTGAGGATGCATCCAGTCTCCAATCCCTGT...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGACAGGGAGCCAGTCCTTaGCATCCGGAAAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRQGASP*HPESKT
Trigger: AGTTTTGCTTTCCGGATGCCAAGGACTGGCTCCCTG...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGGGAGCCAGTCCTTaGCATCCGGAAAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYQGASP*HPESKT
Trigger: AGTTTTGCTTTCCGGATGCCAAGGACTGGCTCCCTG...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACACTGACACAAGTCCATTaGGGGTATTACATTCATCAT +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTLTQVH*GYYIHH
Trigger: ATGATGAATGTAATACCCTCAATGGACTTGTGTCAG...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACTGACACAAGTCCATTaGGGGTATTACATTCATCAT +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNILTQVH*GYYIHH
Trigger: ATGATGAATGTAATACCCTCAATGGACTTGTGTCAG...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCCGGATAAACACCTCTaGCACAAGTCCATTGAGGGT +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYPDKHL*HKSIEG
Trigger: ACCCTCAATGGACTTGTGTCAGAGGTGTTTATCCGG...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGACCGGATAAACACCTCTaGCACAAGTCCATTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRPDKHL*HKSIEG
Trigger: ACCCTCAATGGACTTGTGTCAGAGGTGTTTATCCGG...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGGACTCCACATCCTGTaGAAAGAGTCCAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRGLHIL*KESKEF
Trigger: GAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAAAGAAAAGGTTTCACTaGTGTATTCTGACACAGGGA +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIKKRFH*CILTQG
Trigger: TCCCTGTGTCAGAATACAGCAGTGAAACCTTTTCTT...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACTACTGTTCCACTCTCTaGTCAAAGAGGCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYYCSTL*SKRPLA
Trigger: AGCCAAGGGCCTCTTTGAGCAGAGAGTGGAACAGTA...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGATACTGTTCCACTCTCTaGTCAAAGAGGCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRYCSTL*SKRPLA
Trigger: AGCCAAGGGCCTCTTTGAGCAGAGAGTGGAACAGTA...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGAGGGATACAGGGATTaGAGACTGGATGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTREGYRD*RLDASS
Trigger: TGAGGATGCATCCAGTCTCCAATCCCTGTATCCCTC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACATTTTGGATCCAAACTTaGGTTGACTCTCAGTACCAT +
Preference number: 4 (lower is better)
Translates to: LHPSSDKARKHLALWEYTFWIQT*VDSQYH
Trigger: ATGGTACTGAGAGTCAACCCAAGTTTGGATCCAAAA...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGATTGTACTTCCTGTCTTaGGGACTCCACATCCTGTGC +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRLYFLS*GLHILC
Trigger: GCACAGGATGTGGAGTCCCCAAGACAGGAAGTACAA...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAATAGAGTTAATTCTTTaGACAAGCTTGGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIIELIL*TSLGMR
Trigger: CCGCATTCCCAAGCTTGTCCAAAGAATTAACTCTAT...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGAAGCATCGACTGGATGTaGACCAAGCGCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRSIDWM*TKRWVW
Trigger: CCACACCCAGCGCTTGGTCCACATCCAGTCGATGCT...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAACCAGGAAAGGGGTaGGACAGCAGACAATGTCAA +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYQPGKG*DSRQCQ
Trigger: TTGACATTGTCTGCTGTCCCACCCCTTTCCTGGTTG...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGAGTGCCTCCGGTTCCATaGGTGATGCTGGAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRVPPVP*VMLEFL
Trigger: CAAGAACTCCAGCATCACTCATGGAACCGGAGGCAC...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGAGATGGCAGGCTCAGCTaGGCCAACAGCATCATGTCA +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRDGRLS*ANSIMS
Trigger: TGACATGATGCTGTTGGCTCAGCTGAGCCTGCCATC...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGAGATGGCTTCTTCTTaGGGGACACAACCACAAAGT +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTREMASS*GTQPQS
Trigger: ACTTTGTGGTTGTGTCCCTCAAGAAGAAGCCATCTC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGAAGTGGCTGGGGTACCTaGAGGCTGAGGTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRSGWGT*RLRFHC
Trigger: ACAGTGAAACCTCAGCCTGCAGGTACCCCAGCCACT...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGAGACTTCAGGGACAGCTaGATGGGTGGGTGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRDFRDS*MGGWLY
Trigger: GTACAACCACCCACCCATGCAGCTGTCCCTGAAGTC...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACTTTGAGCCTTTCTTCTaGCTCCCGCATCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYFEPFF*LPHLFG
Trigger: ACCAAACAGATGCGGGAGGCAGAAGAAAGGCTCAAA...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCGGTACTGAGCTTATCTaGTACAAAAATGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRGTELI*YKNDSA
Trigger: CGCAGAGTCATTTTTGTAGCAGATAAGCTCAGTACC...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTTTTTGGATCCAAACTTaGGTTGACTCTCAGTACCAT +
Preference number: 4 (lower is better)
Translates to: RSDPCLSETRGLADRGTTFWIQT*VDSQYH
Trigger: ATGGTACTGAGAGTCAACCCAAGTTTGGATCCAAAA...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACTTCTCAGACAGTTGCTaGGATTTTCGTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYFSDSC*DFRPAL
Trigger: GAGAGCTGGACGAAAATCCCAGCAACTGTCTGAGAA...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGATTCTCAGACAGTTGCTaGGATTTTCGTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRFSDSC*DFRPAL
Trigger: GAGAGCTGGACGAAAATCCCAGCAACTGTCTGAGAA...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGAGGTTTTCCCTGGGGCTaGAAAGGGCGATTCCATGAG +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRGFPWG*KGRFHE
Trigger: CTCATGGAATCGCCCTTTCCAGCCCCAGGGAAAACC...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACGATCCAAACTTGGGTTaGCTCTCAGTACCATTCTCA +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYDPNLG*LSVPFS
Trigger: TGAGAATGGTACTGAGAGTCAACCCAAGTTTGGATC...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGAAAGATTCGGATAAGCTaGCGCACACTGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRKIRIS*RTLRQV
Trigger: CACCTGCCTCAGTGTGCGTCAGCTTATCCGAATCTT...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCAAGAAAAGGTTTCACTaGTGTATTCTGACACAGGGA +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRKKRFH*CILTQG
Trigger: TCCCTGTGTCAGAATACAGCAGTGAAACCTTTTCTT...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGAGGAACTTCATCTTGTTaGCCAGGCCCCGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRGTSSC*PGPGET
Trigger: AGTTTCTCCGGGGCCTGGGCAACAAGATGAAGTTCC...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGACAGGGAGCCAGTCCTTaGCATCCGGAAAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRQGASP*HPESKT
Trigger: AGTTTTGCTTTCCGGATGCCAAGGACTGGCTCCCTG...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGAGCTCAAAGAGGCCCTTaGCTCGACACTTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRAQRGP*LDTSLA
Trigger: AGCTAAGGAAGTGTCGAGCCAAGGGCCTCTTTGAGC...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCCATTCTCTTCTAAAGTaGTTTTGGATCCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRHSLLK*FWIQTW
Trigger: CCAAGTTTGGATCCAAAAGCACTTTAGAAGAGAATG...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGACAACCAGGAAAGGGGTaGGACAGCAGACAATGTCAA +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRQPGKG*DSRQCQ
Trigger: TTGACATTGTCTGCTGTCCCACCCCTTTCCTGGTTG...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
3UTR CAA 72 bp TCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTaGGGAATATACAAATATTTACCAGATTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SKLRQGKKAPGP*GIYKYLPDFLC
Trigger: GCAAAGAAAATCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGATCCTCCGGAGGCCTTTaGAATCAAAGGTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRSSGGL*NQRSFL
Trigger: CAGAAAAGACCTTTGATTTCAAAGGCCTCCGGAGGA...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR GCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGATTTGAGCCTTTCTTCTaGCTCCCGCATCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRFEPFF*LPHLFG
Trigger: ACCAAACAGATGCGGGAGGCAGAAGAAAGGCTCAAA...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGATTCACTGTCACTGAGTaGGTAGATGGGACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRFTVTE*VDGTSW
Trigger: CCAAGAAGTCCCATCTACCCACTCAGTGACAGTGAA...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCTTCTAAAGTGCTTTTaGATCCAAACTTGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYLLKCF*IQTWVD
Trigger: GTCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAG...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAATAGAGTTAATTCTTTaGACAAGCTTGGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRIELIL*TSLGMR
Trigger: CCGCATTCCCAAGCTTGTCCAAAGAATTAACTCTAT...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGACTTAGCTCCCTGTCTTaGATGAAGCCAGCAAACATC +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRLSSLS*MKPANI
Trigger: GATGTTTGCTGGCTTCATCCAAGACAGGGAGCTAAG...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGACATTCTCTTCTAAAGTaGTTTTGGATCCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRHSLLK*FWIQTW
Trigger: CCAAGTTTGGATCCAAAAGCACTTTAGAAGAGAATG...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR GCA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCATTCTCTTCTAAAGTaGTTTTGGATCCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: SSDKARKHLALWEYTNIYHSLLK*FWIQTW
Trigger: CCAAGTTTGGATCCAAAAGCACTTTAGAAGAGAATG...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR TCA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGACTGACACAAGTCCATTaGGGGTATTACATTCATCAT +
Preference number: 4 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRLTQVH*GYYIHH
Trigger: ATGATGAATGTAATACCCTCAATGGACTTGTGTCAG...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS TCA 90 bp GGGATGGCACCACACTGGGGCAGCCCACACTGGGGCAGCCCTCACTaGCCGACCACTCGCTCCCAGGGCCCTCCCGCTTCTCTCCACACA +
Preference number: 5 (lower is better)
Translates to: GMAPHWGSPHWGSPH*PTTRSQGPPASLHT
Trigger: TGTGTGGAGAGAAGCGGGAGGGCCCTGGGAGCGAGTGGTCGGTCAGTGAGGGCTGCCCCAGTGTGGGCTGCCCCAGTGTGGTGCCATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS CCA 90 bp CTCGTACTCAAAGGTACGCTTGGGTTTGGGAACAGGGTTCACAGCTaGATCAGGGGAGCTCTTCGGAGGCAGCAGCTGGGGACTGGAGCT +
Preference number: 5 (lower is better)
Translates to: LVLKGTLGFGNRVHS*IRGALRRQQLGTGA
Trigger: AGCTCCAGTCCCCAGCTGCTGCCTCCGAAGAGCTCCCCTGATCCAGCTGTGAACCCTGTTCCCAAACCCAAGCGTACCTTTGAGTACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS CCA 90 bp GGCTCTTCCTTTCTGACCAGTTCCCACTGCGCAGGGACTGGCTGTTaGACTTCAGGGACAGCTGCATGGGTGGGTGGTTGTACTTCCTGT +
Preference number: 5 (lower is better)
Translates to: GSSFLTSSHCAGTGC*TSGTAAWVGGCTSC
Trigger: ACAGGAAGTACAACCACCCACCCATGCAGCTGTCCCTGAAGTCCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAGAAAGGAAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGAAACGGCGGATACTTTaGGAGGCCACAGACTTGCGG +
Preference number: 5 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEKRRIL*EATDLR
Trigger: CCGCAAGTCTGTGGCCTCCAAAAGTATCCGCCGTTT...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS TCA 90 bp ATGGGACTTCTTGGTGGGTATAAAACTGGAGGTGGAGAGACTGACTaGGACCTGCTCAGCGTCTCCCGAGGGGCCTTAGTGCCTCCGGTT +
Preference number: 5 (lower is better)
Translates to: MGLLGGYKTGGGETD*DLLSVSRGALVPPV
Trigger: AACCGGAGGCACTAAGGCCCCTCGGGAGACGCTGAGCAGGTCTCAGTCAGTCTCTCCACCTCCAGTTTTATACCCACCAAGAAGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000207394.2
ENSMUST00000208583.2
CDS CCA 90 bp AAACGATGGCTCTTCCTTTCTGACCAGTTCCCACTGCGCAGGGACTaGCTGTTGGACTTCAGGGACAGCTGCATGGGTGGGTGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: KRWLFLSDQFPLRRD*LLDFRDSCMGGWLY
Trigger: GTACAACCACCCACCCATGCAGCTGTCCCTGAAGTCCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAGAAAGGAAGAGCCATCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACCACGCATGTCCTTCTaGGGTCTCCGGGTGACTGGT +
Preference number: 5 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRPRMSF*GLRVTG
Trigger: ACCAGTCACCCGGAGACCCAAGAAGGACATGCGTGG...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CAA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAACCACGCATGTCCTTCTaGGGTCTCCGGGTGACTGGT +
Preference number: 5 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQPRMSF*GLRVTG
Trigger: ACCAGTCACCCGGAGACCCAAGAAGGACATGCGTGG...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CAA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGAGAGGGATACAGGGATaGGAGACTGGATGCATCCTC +
Preference number: 5 (lower is better)
Translates to: PPLTDGSSASHDSLTMSERGIQG*ETGCIL
Trigger: GAGGATGCATCCAGTCTCCAATCCCTGTATCCCTCT...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGGGAGTTCTCAGACAGTaGCTGGGATTTTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PPLTDGSSASHDSLTMSEGVLRQ*LGFSSS
Trigger: GCTGGACGAAAATCCCAGCAACTGTCTGAGAACTCC...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAGGCAGCTCCTTCAGTTaGGGAAGGGAGCTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRGSSFS*GRELES
Trigger: GCTCTCCAGCTCCCTTCCCAAACTGAAGGAGCTGCC...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS TCA 90 bp CTTGAGGAGCACCTGGGATTTAGAGTGGCTGGGGTACCTGCAGGCTaGGGTTTCACTGTCACTGAGTGGGTAGATGGGACTTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: LEEHLGFRVAGVPAG*GFTVTEWVDGTSWW
Trigger: CCACCAAGAAGTCCCATCTACCCACTCAGTGACAGTGAAACCTCAGCCTGCAGGTACCCCAGCCACTCTAAATCCCAGGTGCTCCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000207394.2
ENSMUST00000208583.2
CDS CCA 90 bp CCTAGGAGTGAAGGATTTCGAGAATGCCGGTCCTTGAGGAGCACCTaGGATTTAGAGTGGCTGGGGTACCTGCAGGCTGAGGTTTCACTG +
Preference number: 5 (lower is better)
Translates to: PRSEGFRECRSLRST*DLEWLGYLQAEVSL
Trigger: CAGTGAAACCTCAGCCTGCAGGTACCCCAGCCACTCTAAATCCCAGGTGCTCCTCAAGGACCGGCATTCTCGAAATCCTTCACTCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000207394.2
ENSMUST00000208583.2
CDS CCA 90 bp GCCTTTCTTCTGCCTCCCGCATCTGTTTGGTGGGACGGTCCAGCTTaGGAAACTGATAGGAGACTTCAGGGAGGTAGGTGTTCCGAGATG +
Preference number: 5 (lower is better)
Translates to: AFLLPPASVWWDGPA*ETDRRLQGGRCSEM
Trigger: CATCTCGGAACACCTACCTCCCTGAAGTCTCCTATCAGTTTCCCAAGCTGGACCGTCCCACCAAACAGATGCGGGAGGCAGAAGAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACACGCAGGGACTGGCTGTaGGACTTCAGGGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: LHPSSDKARKHLALWEYTRRDWL*DFRDSC
Trigger: GCAGCTGTCCCTGAAGTCCAACAGCCAGTCCCTGCG...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CCACCACTGACTGACGGGAGCTCCGCTTCCCATGACTCACTGACCATGTCAGAGTCATGGCTATGCCTCTaGGGTAATCGTGGCAAACGA +
Preference number: 5 (lower is better)
Translates to: PPLTDGSSASHDSLTMSESWLCL*GNRGKR
Trigger: TCGTTTGCCACGATTACCCAAGAGGCATAGCCATGA...CTCTGACATGGTCAGTGAGTCATGGGAAGCGGAGCTCCCGTCAGTCAGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGAAACGGCGGATACTTTaGGAGGCCACAGACTTGCGG +
Preference number: 5 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQKRRIL*EATDLR
Trigger: CCGCAAGTCTGTGGCCTCCAAAAGTATCCGCCGTTT...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAATGGAGGAACTTCATCTaGTTGCCCAGGCCCCGGAGA +
Preference number: 5 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQWRNFI*LPRPRR
Trigger: TCTCCGGGGCCTGGGCAACAAGATGAAGTTCCTCCA...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CCA 90 bp GACTTCAGGGACAGCTGCATGGGTGGGTGGTTGTACTTCCTGTCTTaGGGACTCCACATCCTGTGCAAAGAGTCCAAGGAGTTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: DFRDSCMGGWLYFLS*GLHILCKESKEFSD
Trigger: GTCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCCCCAAGACAGGAAGTACAACCACCCACCCATGCAGCTGTCCCTGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACGAGAATGCCGGTCCTaGAGGAGCACCTGGGATTTA +
Preference number: 5 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRRECRS*RSTWDL
Trigger: TAAATCCCAGGTGCTCCTCAAGGACCGGCATTCTCG...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CAA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAACGAGAATGCCGGTCCTaGAGGAGCACCTGGGATTTA +
Preference number: 5 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQRECRS*RSTWDL
Trigger: TAAATCCCAGGTGCTCCTCAAGGACCGGCATTCTCG...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CAA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACGCTGGGTGTGGGCTTaGAACCTGTCATCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRRWVWA*NLSSES
Trigger: TGACTCTGATGACAGGTTCAAAGCCCACACCCAGCG...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp GTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAAAACGGCGGATACTTTaGGAGGCCACAGACTTGCGG +
Preference number: 5 (lower is better)
Translates to: VWLRQSAAHNWPVTSTQQKRRIL*EATDLR
Trigger: CCGCAAGTCTGTGGCCTCCAAAAGTATCCGCCGTTT...TTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS GCA 90 bp TTCATCTTGTTGCCCAGGCCCCGGAGAAACTTGTTCATCCCGCTCTaGTCAGTGTCAGGGAGCTCTTCTAGATACTGTTCCACTCTCTGC +
Preference number: 5 (lower is better)
Translates to: FILLPRPRRNLFIPL*SVSGSSSRYCSTLC
Trigger: GCAGAGAGTGGAACAGTATCTAGAAGAGCTCCCTGACACTGAGCAGAGCGGGATGAACAAGTTTCTCCGGGGCCTGGGCAACAAGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CCA 90 bp ATCATGTCATCATGGCTATGCCTCTTGGGTAATCGTGGCAAACGATaGCTCTTCCTTTCTGACCAGTTCCCACTGCGCAGGGACTGGCTG +
Preference number: 5 (lower is better)
Translates to: IMSSWLCLLGNRGKR*LFLSDQFPLRRDWL
Trigger: CAGCCAGTCCCTGCGCAGTGGGAACTGGTCAGAAAGGAAGAGCCATCGTTTGCCACGATTACCCAAGAGGCATAGCCATGATGACATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAAGTCTTCCTCCTCCCTaGGTCTACACTGTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQSLPPP*VYTVAA
Trigger: AGCTGCTACAGTGTAGACCAAGGGAGGAGGAAGACT...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CAA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGATACTCAAAGGTACGCTaGGGTTTGGGAACAGGGTTC +
Preference number: 5 (lower is better)
Translates to: LASHQHPARLHPSSDKARYSKVR*GLGTGF
Trigger: GAACCCTGTTCCCAAACCCAAGCGTACCTTTGAGTA...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CAA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAAGAGGGATACAGGGATaGGAGACTGGATGCATCCTC +
Preference number: 5 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRRGIQG*ETGCIL
Trigger: GAGGATGCATCCAGTCTCCAATCCCTGTATCCCTCT...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAGGAGTTCTCAGACAGTaGCTGGGATTTTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRGVLRQ*LGFSSS
Trigger: GCTGGACGAAAATCCCAGCAACTGTCTGAGAACTCC...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGGAGTTCTCAGACAGTaGCTGGGATTTTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQGVLRQ*LGFSSS
Trigger: GCTGGACGAAAATCCCAGCAACTGTCTGAGAACTCC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGTTGTACTTCCTGTCTaGGGGACTCCACATCCTGTG +
Preference number: 5 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQVVLPV*GTPHPV
Trigger: CACAGGATGTGGAGTCCCCAAGACAGGAAGTACAAC...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAAACTGGGGGATAGCTTaGAGCCTTTCTTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQNWGIA*SLSSAS
Trigger: GGAGGCAGAAGAAAGGCTCAAAGCTATCCCCCAGTT...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAAACTGGGGGATAGCTTaGAGCCTTTCTTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRNWGIA*SLSSAS
Trigger: GGAGGCAGAAGAAAGGCTCAAAGCTATCCCCCAGTT...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CCA 90 bp GGCTCAGCTGAGCCAACAGCATCATGTCATCATGGCTATGCCTCTTaGGTAATCGTGGCAAACGATGGCTCTTCCTTTCTGACCAGTTCC +
Preference number: 5 (lower is better)
Translates to: GSAEPTASCHHGYAS*VIVANDGSSFLTSS
Trigger: GGAACTGGTCAGAAAGGAAGAGCCATCGTTTGCCACGATTACCCAAGAGGCATAGCCATGATGACATGATGCTGTTGGCTCAGCTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGGGTAGATGGGACTTCTaGGTGGGTATAAAACTGGAG +
Preference number: 5 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQGRWDF*VGIKLE
Trigger: CTCCAGTTTTATACCCACCAAGAAGTCCCATCTACC...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CAA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAGGATCCAAACTTGGGTaGACTCTCAGTACCATTCTC +
Preference number: 5 (lower is better)
Translates to: LASHQHPARLHPSSDKARGSKLG*TLSTIL
Trigger: GAGAATGGTACTGAGAGTCAACCCAAGTTTGGATCC...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAATCATGGCTATGCCTCTaGGGTAATCGTGGCAAACGA +
Preference number: 5 (lower is better)
Translates to: NWPVTSTQQDSIQAQTRQSWLCL*GNRGKR
Trigger: TCGTTTGCCACGATTACCCAAGAGGCATAGCCATGA...TTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCGGCAGCTCCTTCAGTTaGGGAAGGGAGCTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRGSSFS*GRELES
Trigger: GCTCTCCAGCTCCCTTCCCAAACTGAAGGAGCTGCC...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS TCA 90 bp GCCTACAATAGCCAAAGCGCCTGCTGCCATCTTCCCCAGTCAGCATaGAAGAAAAGGTTTCACTGCTGTATTCTGACACAGGGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: AYNSQSACCHLPQSA*KKRFHCCILTQGAS
Trigger: ACTGGCTCCCTGTGTCAGAATACAGCAGTGAAACCTTTTCTTTCATGCTGACTGGGGAAGATGGCAGCAGGCGCTTTGGCTATTGTAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS GCA 90 bp GGACTCCACATCCTGTGCAAAGAGTCCAAGGAGTTCTCAGACAGTTaGTGGGATTTTCGTCCAGCTCTCCGGTTCTTTAAGTCCACATCC +
Preference number: 5 (lower is better)
Translates to: GLHILCKESKEFSDS*WDFRPALRFFKSTS
Trigger: GGATGTGGACTTAAAGAACCGGAGAGCTGGACGAAAATCCCAGCAACTGTCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS GCA 90 bp ATGGGTGGGTGGTTGTACTTCCTGTCTTGGGGACTCCACATCCTGTaGAAAGAGTCCAAGGAGTTCTCAGACAGTTGCTGGGATTTTCGT +
Preference number: 5 (lower is better)
Translates to: MGGWLYFLSWGLHIL*KESKEFSDSCWDFR
Trigger: ACGAAAATCCCAGCAACTGTCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCCCCAAGACAGGAAGTACAACCACCCACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CCA 90 bp CTCCACATCCTGTGCAAAGAGTCCAAGGAGTTCTCAGACAGTTGCTaGGATTTTCGTCCAGCTCTCCGGTTCTTTAAGTCCACATCCTCG +
Preference number: 5 (lower is better)
Translates to: LHILCKESKEFSDSC*DFRPALRFFKSTSS
Trigger: CGAGGATGTGGACTTAAAGAACCGGAGAGCTGGACGAAAATCCCAGCAACTGTCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGATCCTCCGGAGGCCTTaGAAATCAAAGGTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQILRRP*KSKVFS
Trigger: AGAAAAGACCTTTGATTTCAAAGGCCTCCGGAGGAT...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CAA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAAGTCTTCCTCCTCCCTaGGTCTACACTGTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: DSIQAQTRQESTWPFGNISLPPP*VYTVAA
Trigger: AGCTGCTACAGTGTAGACCAAGGGAGGAGGAAGACT...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CAA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAAGAGGGATACAGGGATaGGAGACTGGATGCATCCTC +
Preference number: 5 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIRGIQG*ETGCIL
Trigger: GAGGATGCATCCAGTCTCCAATCCCTGTATCCCTCT...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAGGAGTTCTCAGACAGTaGCTGGGATTTTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIGVLRQ*LGFSSS
Trigger: GCTGGACGAAAATCCCAGCAACTGTCTGAGAACTCC...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATAGTTGTACTTCCTGTCTaGGGGACTCCACATCCTGTG +
Preference number: 5 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIVVLPV*GTPHPV
Trigger: CACAGGATGTGGAGTCCCCAAGACAGGAAGTACAAC...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCGCAGGGACTGGCTGTaGGACTTCAGGGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: SSDKARKHLALWEYTNIYRRDWL*DFRDSC
Trigger: GCAGCTGTCCCTGAAGTCCAACAGCCAGTCCCTGCG...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTCGCTGGGTGTGGGCTTaGAACCTGTCATCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: RSDPCLSETRGLADRGTTRWVWA*NLSSES
Trigger: TGACTCTGATGACAGGTTCAAAGCCCACACCCAGCG...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAGAAATGTCTTCACTTaGATGGTTTTCCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQRNVFT*MVFPGA
Trigger: AGCCCCAGGGAAAACCATCAAAGTGAAGACATTTCT...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp GTGGTTTGGCTGAGACAGTCAGCTGCACATAATTGGCCAGTCACCAGCACCCAGAGAAATGTCTTCACTTaGATGGTTTTCCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: VVWLRQSAAHNWPVTSTQRNVFT*MVFPGA
Trigger: AGCCCCAGGGAAAACCATCAAAGTGAAGACATTTCT...CTGGGTGCTGGTGACTGGCCAATTATGTGCAGCTGACTGTCTCAGCCAAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGAAGAAATGTCTTCACTTaGATGGTTTTCCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: LASHQHPARLHPSSDKARRNVFT*MVFPGA
Trigger: AGCCCCAGGGAAAACCATCAAAGTGAAGACATTTCT...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCTGGAGGAACTTCATCTaGTTGCCCAGGCCCCGGAGA +
Preference number: 5 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRWRNFI*LPRPRR
Trigger: TCTCCGGGGCCTGGGCAACAAGATGAAGTTCCTCCA...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp GACTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATATACTCAAAGGTACGCTaGGGTTTGGGAACAGGGTTC +
Preference number: 5 (lower is better)
Translates to: DSIQAQTRQESTWPFGNIYSKVR*GLGTGF
Trigger: GAACCCTGTTCCCAAACCCAAGCGTACCTTTGAGTA...TATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CAA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCCGCTGGGTGTGGGCTTaGAACCTGTCATCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRRWVWA*NLSSES
Trigger: TGACTCTGATGACAGGTTCAAAGCCCACACCCAGCG...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTAACTGGGGGATAGCTTaGAGCCTTTCTTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: RSDPCLSETRGLADRGTTNWGIA*SLSSAS
Trigger: GGAGGCAGAAGAAAGGCTCAAAGCTATCCCCCAGTT...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCAAACGGCGGATACTTTaGGAGGCCACAGACTTGCGG +
Preference number: 5 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRKRRIL*EATDLR
Trigger: CCGCAAGTCTGTGGCCTCCAAAAGTATCCGCCGTTT...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCAAGGTACGCTTGGGTTaGGGAACAGGGTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRKVRLG*GTGFTA
Trigger: AGCTGTGAACCCTGTTCCCAAACCCAAGCGTACCTT...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CAA 90 bp CTCCATCCAAGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAGGATCCAAACTTGGGTaGACTCTCAGTACCATTCTC +
Preference number: 5 (lower is better)
Translates to: LHPSSDKARKHLALWEYTGSKLG*TLSTIL
Trigger: GAGAATGGTACTGAGAGTCAACCCAAGTTTGGATCC...TGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCTTGGATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCGTTGTACTTCCTGTCTaGGGGACTCCACATCCTGTG +
Preference number: 5 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRVVLPV*GTPHPV
Trigger: CACAGGATGTGGAGTCCCCAAGACAGGAAGTACAAC...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGAGATAGAGTTAATTCTTaGGACAAGCTTGGGAATGCG +
Preference number: 5 (lower is better)
Translates to: LHIIGQSPAPSKTPSKLRDRVNS*DKLGNA
Trigger: CGCATTCCCAAGCTTGTCCAAAGAATTAACTCTATC...TCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCAACTGGGGGATAGCTTaGAGCCTTTCTTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRNWGIA*SLSSAS
Trigger: GGAGGCAGAAGAAAGGCTCAAAGCTATCCCCCAGTT...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp TTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGACAAGGCAAGATCTGACACAAGTCCATaGAGGGTATTACATTCATCA +
Preference number: 5 (lower is better)
Translates to: LASHQHPARLHPSSDKARSDTSP*RVLHSS
Trigger: TGATGAATGTAATACCCTCAATGGACTTGTGTCAGA...TCTTGCCTTGTCTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp GCTGCACATAATTGGCCAGTCACCAGCACCCAGCAAGACTCCATCCAAGCTCAGTCTGACACAAGTCCATaGAGGGTATTACATTCATCA +
Preference number: 5 (lower is better)
Translates to: AAHNWPVTSTQQDSIQAQSDTSP*RVLHSS
Trigger: TGATGAATGTAATACCCTCAATGGACTTGTGTCAGA...CTGAGCTTGGATGGAGTCTTGCTGGGTGCTGGTGACTGGCCAATTATGTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACTGGAGGAACTTCATCTaGTTGCCCAGGCCCCGGAGA +
Preference number: 5 (lower is better)
Translates to: SSDKARKHLALWEYTNIYWRNFI*LPRPRR
Trigger: TCTCCGGGGCCTGGGCAACAAGATGAAGTTCCTCCA...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTGGATCCAAACTTGGGTaGACTCTCAGTACCATTCTC +
Preference number: 5 (lower is better)
Translates to: RSDPCLSETRGLADRGTTGSKLG*TLSTIL
Trigger: GAGAATGGTACTGAGAGTCAACCCAAGTTTGGATCC...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGACGCAGGGACTGGCTGTaGGACTTCAGGGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRRRDWL*DFRDSC
Trigger: GCAGCTGTCCCTGAAGTCCAACAGCCAGTCCCTGCG...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCTCATGGCTATGCCTCTaGGGTAATCGTGGCAAACGA +
Preference number: 5 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRSWLCL*GNRGKR
Trigger: TCGTTTGCCACGATTACCCAAGAGGCATAGCCATGA...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCGCTGGGTGTGGGCTTaGAACCTGTCATCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: SSDKARKHLALWEYTNIYRWVWA*NLSSES
Trigger: TGACTCTGATGACAGGTTCAAAGCCCACACCCAGCG...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS TCA 90 bp ACTGAGCTTATCTGCTACAAAAATGACTCTGCGTTCCAACAGCAATaGGGCAAAGATTCGGATAAGCTGACGCACACTGAGGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: TELICYKNDSAFQQQ*GKDSDKLTHTEAGE
Trigger: TTCACCTGCCTCAGTGTGCGTCAGCTTATCCGAATCTTTGCCTCATTGCTGTTGGAACGCAGAGTCATTTTTGTAGCAGATAAGCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGAGGCAGCTCCTTCAGTTaGGGAAGGGAGCTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRGSSFS*GRELES
Trigger: GCTCTCCAGCTCCCTTCCCAAACTGAAGGAGCTGCC...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS TCA 90 bp GGAGTAGTGACCCACAGTCTCCACAAAGAACCGGATAAACACCTCTaGCACAAGTCCATTGAGGGTATTACATTCATCATCAGAGTCACT +
Preference number: 5 (lower is better)
Translates to: GVVTHSLHKEPDKHL*HKSIEGITFIIRVT
Trigger: AGTGACTCTGATGATGAATGTAATACCCTCAATGGACTTGTGTCAGAGGTGTTTATCCGGTTCTTTGTGGAGACTGTGGGTCACTACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGATCATGGCTATGCCTCTaGGGTAATCGTGGCAAACGA +
Preference number: 5 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRSWLCL*GNRGKR
Trigger: TCGTTTGCCACGATTACCCAAGAGGCATAGCCATGA...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTGATAGAGTTAATTCTTaGGACAAGCTTGGGAATGCG +
Preference number: 5 (lower is better)
Translates to: RSDPCLSETRGLADRGTTDRVNS*DKLGNA
Trigger: CGCATTCCCAAGCTTGTCCAAAGAATTAACTCTATC...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AAAGCTTACAGCAGATTATTTACAAACAGTATCCTGGAATATGGTGAAGGCAGATGGAGGAACTTCATCTaGTTGCCCAGGCCCCGGAGA +
Preference number: 5 (lower is better)
Translates to: KAYSRLFTNSILEYGEGRWRNFI*LPRPRR
Trigger: TCTCCGGGGCCTGGGCAACAAGATGAAGTTCCTCCA...TCTGCCTTCACCATATTCCAGGATACTGTTTGTAAATAATCTGCTGTAAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS GCA 90 bp TGGGAAGCCCTCCCACAATATCTTCATAGGCATTCTCTTCTAAAGTaGTTTTGGATCCAAACTTGGGTTGACTCTCAGTACCATTCTCAG +
Preference number: 5 (lower is better)
Translates to: WEALPQYLHRHSLLK*FWIQTWVDSQYHSQ
Trigger: CTGAGAATGGTACTGAGAGTCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAGAGAATGCCTATGAAGATATTGTGGGAGGGCTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp AGCTCAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACGGTAGATGGGACTTCTaGGTGGGTATAAAACTGGAG +
Preference number: 5 (lower is better)
Translates to: SSDKARKHLALWEYTNIYGRWDF*VGIKLE
Trigger: CTCCAGTTTTATACCCACCAAGAAGTCCCATCTACC...GTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS-3UTR CAA 90 bp CAGACAAGGCAAGAAAGCACCTGGCCCTTTGGGAATATACAAATATTTACCAGAGGATCCAAACTTGGGTaGACTCTCAGTACCATTCTC +
Preference number: 5 (lower is better)
Translates to: QTRQESTWPFGNIQIFTRGSKLG*TLSTIL
Trigger: GAGAATGGTACTGAGAGTCAACCCAAGTTTGGATCC...TCTGGTAAATATTTGTATATTCCCAAAGGGCCAGGTGCTTTCTTGCCTTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp TACAGTTTATTGAGAACATCTGTGGATGGTGGAAGGAGAAATGCCCTGTACCGCGATAGAGTTAATTCTTaGGACAAGCTTGGGAATGCG +
Preference number: 5 (lower is better)
Translates to: YSLLRTSVDGGRRNALYRDRVNS*DKLGNA
Trigger: CGCATTCCCAAGCTTGTCCAAAGAATTAACTCTATC...GCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTCTCAATAAACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS-3UTR CAA 90 bp CGAAGTGATCCTTGCCTTTCAGAAACAAGAGGCTTGGCAGATAGGGGAACTACTTCTGACACAAGTCCATaGAGGGTATTACATTCATCA +
Preference number: 5 (lower is better)
Translates to: RSDPCLSETRGLADRGTTSDTSP*RVLHSS
Trigger: TGATGAATGTAATACCCTCAATGGACTTGTGTCAGA...AGTAGTTCCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS TCA 72 bp CCACACTGGGGCAGCCCACACTGGGGCAGCCCTCACTaGCCGACCACTCGCTCCCAGGGCCCTCCCGCTTCT +
Preference number: 6 (lower is better)
Translates to: PHWGSPHWGSPH*PTTRSQGPPAS
Trigger: AGAAGCGGGAGGGCCCTGGGAGCGAGTGGTCGGTCAGTGAGGGCTGCCCCAGTGTGGGCTGCCCCAGTGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS GCA 72 bp CAGCTGCTAGGGAGCTGGGGGAGACCCCGGCCAGGCTaGTCCTTTAGGGCTTGTTCGATCTTCTGGATCCGG +
Preference number: 6 (lower is better)
Translates to: QLLGSWGRPRPG*SFRACSIFWIR
Trigger: CCGGATCCAGAAGATCGAACAAGCCCTAAAGGAGCAGCCTGGCCGGGGTCTCCCCCAGCTCCCTAGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS GCA 72 bp CCTCCCCAGCAACTCCGGCCACTCCTCCTGCCCTGCTaGTGGGGCTTACACTTGCAGTTCCTGTTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: PPQQLRPLLLPC*WGLHLQFLLAP
Trigger: AGGAGCCAACAGGAACTGCAAGTGTAAGCCCCAGCAGCAGGGCAGGAGGAGTGGCCGGAGTTGCTGGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS GCA 72 bp CTGCCTCCCCAGCAACTCCGGCCACTCCTCCTGCCCTaGTGCTGGGGCTTACACTTGCAGTTCCTGTTGGCT +
Preference number: 6 (lower is better)
Translates to: LPPQQLRPLLLP*CWGLHLQFLLA
Trigger: AGCCAACAGGAACTGCAAGTGTAAGCCCCAGCAGCAGGGCAGGAGGAGTGGCCGGAGTTGCTGGGGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS CCA 72 bp GCCACTCGAGCAGCTCCAGCTCCAGCGTCCGATAGCTaGGCGCTCGCTTCAGCATCGACTGGATGTGGACCA +
Preference number: 6 (lower is better)
Translates to: ATRAAPAPASDS*ALASASTGCGP
Trigger: TGGTCCACATCCAGTCGATGCTGAAGCGAGCGCCCAGCTATCGGACGCTGGAGCTGGAGCTGCTCGAGTGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS GCA 72 bp TCTCTCGGATACCCAGGCTATGGGCTCGGGTACCAGTaGAACTCAGCAAGACACTCCGAGACCCGGCCCCTA +
Preference number: 6 (lower is better)
Translates to: SLGYPGYGLGYQ*NSARHSETRPL
Trigger: TAGGGGCCGGGTCTCGGAGTGTCTTGCTGAGTTGCACTGGTACCCGAGCCCATAGCCTGGGTATCCGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS CAA 90 bp TGTTGGCTCCTCCAAGGTGCCCAAAGTTCCAGTCTTCCTCCTCCCTaGGTCTACACTGTAGCAGCTGCTAGGGAGCTGGGGGAGACCCCG +
Preference number: 6 (lower is better)
Translates to: CWLLQGAQSSSLPPP*VYTVAAARELGETP
Trigger: CGGGGTCTCCCCCAGCTCCCTAGCAGCTGCTACAGTGTAGACCAAGGGAGGAGGAAGACTGGAACTTTGGGCACCTTGGAGGAGCCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS TCA 72 bp CAGCAGCTGGGGACTGGAGCTATTTCCAGGGGTCTCTaGCTTCATGGAAGCACTGCCTTCCCTGTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: QQLGTGAISRGL*LHGSTAFPVQG
Trigger: CCCCTGGACAGGGAAGGCAGTGCTTCCATGAAGTCAGAGACCCCTGGAAATAGCTCCAGTCCCCAGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS GCA 72 bp CTGCGCAGGGACTGGCTGTTGGACTTCAGGGACAGCTaGATGGGTGGGTGGTTGTACTTCCTGTCTTGGGGA +
Preference number: 6 (lower is better)
Translates to: LRRDWLLDFRDS*MGGWLYFLSWG
Trigger: TCCCCAAGACAGGAAGTACAACCACCCACCCATGCAGCTGTCCCTGAAGTCCAACAGCCAGTCCCTGCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CCA 72 bp ACAGCTGGATCAGGGGAGCTCTTCGGAGGCAGCAGCTaGGGACTGGAGCTATTTCCAGGGGTCTCTGACTTC +
Preference number: 6 (lower is better)
Translates to: TAGSGELFGGSS*GLELFPGVSDF
Trigger: GAAGTCAGAGACCCCTGGAAATAGCTCCAGTCCCCAGCTGCTGCCTCCGAAGAGCTCCCCTGATCCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS CAA 90 bp CCACTCCTCCTGCCCTGCTGCTGGGGCTTACACTTGCAGTTCCTGTaGGCTCCTCCAAGGTGCCCAAAGTTCCAGTCTTCCTCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: PLLLPCCWGLHLQFL*APPRCPKFQSSSSL
Trigger: AAGGGAGGAGGAAGACTGGAACTTTGGGCACCTTGGAGGAGCCAACAGGAACTGCAAGTGTAAGCCCCAGCAGCAGGGCAGGAGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS GCA 72 bp GGGGAGGCAAGCAGCCACACCTTCTACATCCTGGACTaGACCCTGGACAGTCTCCTTCTGGTCCTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: GEASSHTFYILD*TLDSLLLVLSF
Trigger: AAAAGAGAGGACCAGAAGGAGACTGTCCAGGGTGCAGTCCAGGATGTAGAAGGTGTGGCTGCTTGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS CCA 72 bp GAAGGATTTCGAGAATGCCGGTCCTTGAGGAGCACCTaGGATTTAGAGTGGCTGGGGTACCTGCAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: EGFRECRSLRST*DLEWLGYLQAE
Trigger: CTCAGCCTGCAGGTACCCCAGCCACTCTAAATCCCAGGTGCTCCTCAAGGACCGGCATTCTCGAAATCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000207394.2
ENSMUST00000208583.2
CDS CCA 72 bp CTGCCTCCCGCATCTGTTTGGTGGGACGGTCCAGCTTaGGAAACTGATAGGAGACTTCAGGGAGGTAGGTGT +
Preference number: 6 (lower is better)
Translates to: LPPASVWWDGPA*ETDRRLQGGRC
Trigger: ACACCTACCTCCCTGAAGTCTCCTATCAGTTTCCCAAGCTGGACCGTCCCACCAAACAGATGCGGGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS TCA 72 bp CACCTGGGATTTAGAGTGGCTGGGGTACCTGCAGGCTaGGGTTTCACTGTCACTGAGTGGGTAGATGGGACT +
Preference number: 6 (lower is better)
Translates to: HLGFRVAGVPAG*GFTVTEWVDGT
Trigger: AGTCCCATCTACCCACTCAGTGACAGTGAAACCTCAGCCTGCAGGTACCCCAGCCACTCTAAATCCCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000207394.2
ENSMUST00000208583.2
CDS GCA 72 bp TTGCCCAGGCCCCGGAGAAACTTGTTCATCCCGCTCTaGTCAGTGTCAGGGAGCTCTTCTAGATACTGTTCC +
Preference number: 6 (lower is better)
Translates to: LPRPRRNLFIPL*SVSGSSSRYCS
Trigger: GGAACAGTATCTAGAAGAGCTCCCTGACACTGAGCAGAGCGGGATGAACAAGTTTCTCCGGGGCCTGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CCA 72 bp TCCCATGCTGAGATCTTCTCTCGGATACCCAGGCTATaGGCTCGGGTACCAGTGCAACTCAGCAAGACACTC +
Preference number: 6 (lower is better)
Translates to: SHAEIFSRIPRL*ARVPVQLSKTL
Trigger: GAGTGTCTTGCTGAGTTGCACTGGTACCCGAGCCCATAGCCTGGGTATCCGAGAGAAGATCTCAGCATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS CCA 72 bp GACAGCTGCATGGGTGGGTGGTTGTACTTCCTGTCTTaGGGACTCCACATCCTGTGCAAAGAGTCCAAGGAG +
Preference number: 6 (lower is better)
Translates to: DSCMGGWLYFLS*GLHILCKESKE
Trigger: CTCCTTGGACTCTTTGCACAGGATGTGGAGTCCCCAAGACAGGAAGTACAACCACCCACCCATGCAGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CAA 72 bp GGACAGCTGCATGGGTGGGTGGTTGTACTTCCTGTCTaGGGGACTCCACATCCTGTGCAAAGAGTCCAAGGA +
Preference number: 6 (lower is better)
Translates to: GQLHGWVVVLPV*GTPHPVQRVQG
Trigger: TCCTTGGACTCTTTGCACAGGATGTGGAGTCCCCAAGACAGGAAGTACAACCACCCACCCATGCAGCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CAA 72 bp AGGAACTTCATCTTGTTGCCCAGGCCCCGGAGAAACTaGTTCATCCCGCTCTGCTCAGTGTCAGGGAGCTCT +
Preference number: 6 (lower is better)
Translates to: RNFILLPRPRRN*FIPLCSVSGSS
Trigger: AGAGCTCCCTGACACTGAGCAGAGCGGGATGAACAAGTTTCTCCGGGGCCTGGGCAACAAGATGAAGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CAA 90 bp GGACTTCAGGGACAGCTGCATGGGTGGGTGGTTGTACTTCCTGTCTaGGGGACTCCACATCCTGTGCAAAGAGTCCAAGGAGTTCTCAGA +
Preference number: 6 (lower is better)
Translates to: GLQGQLHGWVVVLPV*GTPHPVQRVQGVLR
Trigger: TCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCCCCAAGACAGGAAGTACAACCACCCACCCATGCAGCTGTCCCTGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CCA 72 bp TCATGGCTATGCCTCTTGGGTAATCGTGGCAAACGATaGCTCTTCCTTTCTGACCAGTTCCCACTGCGCAGG +
Preference number: 6 (lower is better)
Translates to: SWLCLLGNRGKR*LFLSDQFPLRR
Trigger: CCTGCGCAGTGGGAACTGGTCAGAAAGGAAGAGCCATCGTTTGCCACGATTACCCAAGAGGCATAGCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CAA 72 bp TTCTTGTCAGCCTCGTACTCAAAGGTACGCTTGGGTTaGGGAACAGGGTTCACAGCTGGATCAGGGGAGCTC +
Preference number: 6 (lower is better)
Translates to: FLSASYSKVRLG*GTGFTAGSGEL
Trigger: GAGCTCCCCTGATCCAGCTGTGAACCCTGTTCCCAAACCCAAGCGTACCTTTGAGTACGAGGCTGACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS CAA 90 bp GGGAGCTCTTCTAGATACTGTTCCACTCTCTGCTCAAAGAGGCCCTaGGCTCGACACTTCCTTAGCTCCCTGTCTTGGATGAAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: GSSSRYCSTLCSKRP*ARHFLSSLSWMKPA
Trigger: TGCTGGCTTCATCCAAGACAGGGAGCTAAGGAAGTGTCGAGCCAAGGGCCTCTTTGAGCAGAGAGTGGAACAGTATCTAGAAGAGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS TCA 72 bp GGCTGGGGTACCTGCAGGCTGAGGTTTCACTGTCACTaGGTGGGTAGATGGGACTTCTTGGTGGGTATAAAA +
Preference number: 6 (lower is better)
Translates to: GWGTCRLRFHCH*VGRWDFLVGIK
Trigger: TTTTATACCCACCAAGAAGTCCCATCTACCCACTCAGTGACAGTGAAACCTCAGCCTGCAGGTACCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000207394.2
ENSMUST00000208583.2
CDS GCA 72 bp AAAGCAAAACTGGGGGATAGCTTTGAGCCTTTCTTCTaGCTCCCGCATCTGTTTGGTGGGACGGTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: KAKLGDSFEPFF*LPHLFGGTVQL
Trigger: AAGCTGGACCGTCCCACCAAACAGATGCGGGAGGCAGAAGAAAGGCTCAAAGCTATCCCCCAGTTTTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CCA 72 bp CAAGCAGCCACACCTTCTACATCCTGGACTGCACCCTaGACAGTCTCCTTCTGGTCCTCTCTTTTGCGTAAT +
Preference number: 6 (lower is better)
Translates to: QAATPSTSWTAP*TVSFWSSLLRN
Trigger: ATTACGCAAAAGAGAGGACCAGAAGGAGACTGTCCAGGGTGCAGTCCAGGATGTAGAAGGTGTGGCTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS CAA 90 bp GTGGGTGAAGGAGGTAGACCATTGCTTGGCTTAGTCTTAGGATTCTaGTCAGCCTCGTACTCAAAGGTACGCTTGGGTTTGGGAACAGGG +
Preference number: 6 (lower is better)
Translates to: VGEGGRPLLGLVLGF*SASYSKVRLGLGTG
Trigger: CCCTGTTCCCAAACCCAAGCGTACCTTTGAGTACGAGGCTGACAAGAATCCTAAGACTAAGCCAAGCAATGGTCTACCTCCTTCACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS CAA 90 bp AGCTCTAACACCTCATTGCCAGCGCCGGGAAGAAATGTCTTCACTTaGATGGTTTTCCCTGGGGCTGGAAAGGGCGATTCCATGAGACTT +
Preference number: 6 (lower is better)
Translates to: SSNTSLPAPGRNVFT*MVFPGAGKGDSMRL
Trigger: AAGTCTCATGGAATCGCCCTTTCCAGCCCCAGGGAAAACCATCAAAGTGAAGACATTTCTTCCCGGCGCTGGCAATGAGGTGTTAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS TCA 72 bp TCAAACTCGAAGGATTTTCTGTTCTGTGACTTCCGGTaGCCACGCATGTCCTTCTTGGGTCTCCGGGTGACT +
Preference number: 6 (lower is better)
Translates to: SNSKDFLFCDFR*PRMSFLGLRVT
Trigger: AGTCACCCGGAGACCCAAGAAGGACATGCGTGGTCACCGGAAGTCACAGAACAGAAAATCCTTCGAGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
CDS GCA 72 bp TGGTTGTACTTCCTGTCTTGGGGACTCCACATCCTGTaGAAAGAGTCCAAGGAGTTCTCAGACAGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: WLYFLSWGLHIL*KESKEFSDSCW
Trigger: CCAGCAACTGTCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCCCCAAGACAGGAAGTACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CAA 72 bp TCTAGATACTGTTCCACTCTCTGCTCAAAGAGGCCCTaGGCTCGACACTTCCTTAGCTCCCTGTCTTGGATG +
Preference number: 6 (lower is better)
Translates to: SRYCSTLCSKRP*ARHFLSSLSWM
Trigger: CATCCAAGACAGGGAGCTAAGGAAGTGTCGAGCCAAGGGCCTCTTTGAGCAGAGAGTGGAACAGTATCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CCA 72 bp CTGTGCAAAGAGTCCAAGGAGTTCTCAGACAGTTGCTaGGATTTTCGTCCAGCTCTCCGGTTCTTTAAGTCC +
Preference number: 6 (lower is better)
Translates to: LCKESKEFSDSC*DFRPALRFFKS
Trigger: GGACTTAAAGAACCGGAGAGCTGGACGAAAATCCCAGCAACTGTCTGAGAACTCCTTGGACTCTTTGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS CCA 72 bp GAGCCAACAGCATCATGTCATCATGGCTATGCCTCTTaGGTAATCGTGGCAAACGATGGCTCTTCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: EPTASCHHGYAS*VIVANDGSSFL
Trigger: CAGAAAGGAAGAGCCATCGTTTGCCACGATTACCCAAGAGGCATAGCCATGATGACATGATGCTGTTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS GCA 72 bp ATCCTGTGCAAAGAGTCCAAGGAGTTCTCAGACAGTTaGTGGGATTTTCGTCCAGCTCTCCGGTTCTTTAAG +
Preference number: 6 (lower is better)
Translates to: ILCKESKEFSDS*WDFRPALRFFK
Trigger: CTTAAAGAACCGGAGAGCTGGACGAAAATCCCAGCAACTGTCTGAGAACTCCTTGGACTCTTTGCACAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS GCA 72 bp AGTAGGAGAAGAGGGATACAGGGATTGGAGACTGGATaGATCCTCAAACTCGAAGGATTTTCTGCTCAGCGT +
Preference number: 6 (lower is better)
Translates to: SRRRGIQGLETG*ILKLEGFSAQR
Trigger: ACGCTGAGCAGAAAATCCTTCGAGTTTGAGGATGCATCCAGTCTCCAATCCCTGTATCCCTCTTCTCCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084738.5
ENSMUST00000168005.8
ENSMUST00000207745.2
CDS CCA 72 bp GGTTCTTTAAGTCCACATCCTCGTAGGGATTCTCCTTaGGAAGCCCTCCCACAATATCTTCATAGGCATTCT +
Preference number: 6 (lower is better)
Translates to: GSLSPHPRRDSP*EALPQYLHRHS
Trigger: AGAATGCCTATGAAGATATTGTGGGAGGGCTTCCCAAGGAGAATCCCTACGAGGATGTGGACTTAAAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS TCA 72 bp AGAGTCACTCTCGCTTTCACTGTTCTCATCTCTCAATaGTGCTGTCTCAAGGCTGGACATAGACAGCTTTTT +
Preference number: 6 (lower is better)
Translates to: RVTLAFTVLISQ*CCLKAGHRQLF
Trigger: AAAAAGCTGTCTATGTCCAGCCTTGAGACAGCATCATTGAGAGATGAGAACAGTGAAAGCGAGAGTGACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS TCA 72 bp ACCCACAGTCTCCACAAAGAACCGGATAAACACCTCTaGCACAAGTCCATTGAGGGTATTACATTCATCATC +
Preference number: 6 (lower is better)
Translates to: THSLHKEPDKHL*HKSIEGITFII
Trigger: GATGATGAATGTAATACCCTCAATGGACTTGTGTCAGAGGTGTTTATCCGGTTCTTTGTGGAGACTGTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8
CDS GCA 72 bp CTCCCACAATATCTTCATAGGCATTCTCTTCTAAAGTaGTTTTGGATCCAAACTTGGGTTGACTCTCAGTAC +
Preference number: 6 (lower is better)
Translates to: LPQYLHRHSLLK*FWIQTWVDSQY
Trigger: GTACTGAGAGTCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAGAGAATGCCTATGAAGATATTGTGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077909.9
ENSMUST00000079282.8
ENSMUST00000084738.5
ENSMUST00000168005.8