Pregenerated sensors for DEGS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021263Ensembl transcript IDs: ENSMUST00000021691.6, ENSMUST00000167978.9, ENSMUST00000222255.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACTGCCCAGTGAGGCTGGACGCCCCTCAAAGTTTCCTGCACTCATaGACTGTGAGGCAGCCACAGCAGCTGCGCCGAGGCACGGGCACA | + |
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Preference number: 1 (lower is better) Translates to: HCPVRLDAPQSFLHS*TVRQPQQLRRGTGT Trigger: TGTGCCCGTGCCTCGGCGCAGCTGCTGTGGCTGCCTCACAGTCCATGAGTGCAGGAAACTTTGAGGGGCGTCCAGCCTCACTGGGCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR GCA 90 bp | CAGGTTACCAGGCACCTCCTACTGGTAGAGCTGAGCCCCAGGTCCTaGACACAGCCCCAGTGTTTCAGGTGGGTGGGCTGTGAGGACTCC | + |
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Preference number: 1 (lower is better) Translates to: QVTRHLLLVELSPRS*TQPQCFRWVGCEDS Trigger: GGAGTCCTCACAGCCCACCCACCTGAAACACTGGGGCTGTGTGCAGGACCTGGGGCTCAGCTCTACCAGTAGGAGGTGCCTGGTAACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR GCA 90 bp | GCGCCGGCTCTTGGCTGCCCTGGTGGAAATGTGCAGGCCAGAGCATaGGAGGATAACAGGAGAAAGAGGGGGCCTCAGAAAGCAGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: APALGCPGGNVQARA*EDNRRKRGPQKAAG Trigger: CCCAGCTGCTTTCTGAGGCCCCCTCTTTCTCCTGTTATCCTCGCATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCGGCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR GCA 90 bp | GTCCAAACTCAGGCTCTGGCTCACTCTCACGCGCCGGCTCTTGGCTaGCCTGGTGGAAATGTGCAGGCCAGAGCATGCGAGGATAACAGG | + |
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Preference number: 1 (lower is better) Translates to: VQTQALAHSHAPALG*PGGNVQARACEDNR Trigger: CCTGTTATCCTCGCATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCGGCGCGTGAGAGTGAGCCAGAGCCTGAGTTTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR TCA 90 bp | CTTGCTGGGCACAACAGACCCAGAAGCAGCTTAGACTGCAGAAGCTaGTGCAGGCACACGGGCAGGAGGCGTATGGCTGCTCGATCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LAGHNRPRSSLDCRS*CRHTGRRRMAARSG Trigger: TCCAGATCGAGCAGCCATACGCCTCCTGCCCGTGTGCCTGCATCAGCTTCTGCAGTCTAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
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| 3UTR GCA 90 bp | CAGCTGGGTGCAGTGTGGCCTTTCCATGCCACAGAGCTGTCAGAATaGAGCACAGCTCCAGCAGCCACGGTGTTGCAGTCTGTCTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: QLGAVWPFHATELSE*STAPAATVLQSVCP Trigger: TGGACAGACAGACTGCAACACCGTGGCTGCTGGAGCTGTGCTGCATTCTGACAGCTCTGTGGCATGGAAAGGCCACACTGCACCCAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR CCA 90 bp | GACACTGTTGGTGCCTCAGCTGACAGGGAGCAGCTGGGTGCAGTGTaGCCTTTCCATGCCACAGAGCTGTCAGAATGCAGCACAGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: DTVGASADREQLGAV*PFHATELSECSTAP Trigger: TGGAGCTGTGCTGCATTCTGACAGCTCTGTGGCATGGAAAGGCCACACTGCACCCAGCTGCTCCCTGTCAGCTGAGGCACCAACAGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR TCA 90 bp | AAGGGTCATGTCAATATGGCCAGGAGAGTAGCCATGGGGACCTTGTaGACTCCAATGGCCACCAGGACCTTAGAACAGGGTGCCTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: KGHVNMARRVAMGTL*TPMATRTLEQGACS Trigger: TGAGCAGGCACCCTGTTCTAAGGTCCTGGTGGCCATTGGAGTTCACAAGGTCCCCATGGCTACTCTCCTGGCCATATTGACATGACCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR TCA 90 bp | CATACAGGCTCACTTCACTCCAGGTGGGCTGCTCACCTCAGGTTATaGGAGGCCTCACAGTTGAAGATGCACTGGAGCACATTGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: HTGSLHSRWAAHLRL*EASQLKMHWSTLLG Trigger: TCCCAGCAATGTGCTCCAGTGCATCTTCAACTGTGAGGCCTCTCATAACCTGAGGTGAGCAGCCCACCTGGAGTGAAGTGAGCCTGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR CCA 90 bp | TGTGTCCACACAATAATAAACTGTTCACTGTCCAAACTCAGGCTCTaGCTCACTCTCACGCGCCGGCTCTTGGCTGCCCTGGTGGAAATG | + |
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Preference number: 1 (lower is better) Translates to: CVHTIINCSLSKLRL*LTLTRRLLAALVEM Trigger: CATTTCCACCAGGGCAGCCAAGAGCCGGCGCGTGAGAGTGAGCCAGAGCCTGAGTTTGGACAGTGAACAGTTTATTATTGTGTGGACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR GCA 90 bp | CACAGCTCCAGCAGCCACGGTGTTGCAGTCTGTCTGTCCACGCAGTaGGCGTTGTGTCCACACAATAATAAACTGTTCACTGTCCAAACT | + |
|
Preference number: 1 (lower is better) Translates to: HSSSSHGVAVCLSTQ*ALCPHNNKLFTVQT Trigger: AGTTTGGACAGTGAACAGTTTATTATTGTGTGGACACAACGCGCACTGCGTGGACAGACAGACTGCAACACCGTGGCTGCTGGAGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR TCA 90 bp | TCTGCTCCAGTATCGATGCTTGACAAAGCTCCATTATTATTACTGTaGGTGGCAGTGACACTGCCCAGTGAGGCTGGACGCCCCTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: SAPVSMLDKAPLLLL*VAVTLPSEAGRPSK Trigger: CTTTGAGGGGCGTCCAGCCTCACTGGGCAGTGTCACTGCCACTCACAGTAATAATAATGGAGCTTTGTCAAGCATCGATACTGGAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR TCA 90 bp | TATCGATGCTTGACAAAGCTCCATTATTATTACTGTGAGTGGCAGTaGCACTGCCCAGTGAGGCTGGACGCCCCTCAAAGTTTCCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: YRCLTKLHYYYCEWQ*HCPVRLDAPQSFLH Trigger: GTGCAGGAAACTTTGAGGGGCGTCCAGCCTCACTGGGCAGTGTCACTGCCACTCACAGTAATAATAATGGAGCTTTGTCAAGCATCGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR TCA 90 bp | CTAAGGGTGGTGGTTGAATCGTTTATCTGCTCCAGTATCGATGCTTaGCAAAGCTCCATTATTATTACTGTGAGTGGCAGTGACACTGCC | + |
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Preference number: 1 (lower is better) Translates to: LRVVVESFICSSIDA*QSSIIITVSGSDTA Trigger: GGCAGTGTCACTGCCACTCACAGTAATAATAATGGAGCTTTGTCAAGCATCGATACTGGAGCAGATAAACGATTCAACCACCACCCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR CCA 90 bp | CCTTTGGTTTATAGAGAACACCCCCAAATCACCTGCTTTATTAGATaGCTTCCAAGTTTTCTCCTAGGTGACACTGTTGGTGCCTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: PLVYREHPQITCFIR*LPSFLLGDTVGASA Trigger: AGCTGAGGCACCAACAGTGTCACCTAGGAGAAAACTTGGAAGCCATCTAATAAAGCAGGTGATTTGGGGGTGTTCTCTATAAACCAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR-3UTR GCA 90 bp | TTTCTCCTAGGTGACACTGTTGGTGCCTCAGCTGACAGGGAGCAGCTGGGTGCAAGGGTGCCTGCTCAGTaGTGGGGCTGGGTAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: FLLGDTVGASADREQLGARVPAQ*WGWVGE Trigger: CTCTCCTACCCAGCCCCAGCACTGAGCAGGCACCCT...TGCACCCAGCTGCTCCCTGTCAGCTGAGGCACCAACAGTGTCACCTAGGAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCAGTGTGGCCTTTCCATGCCACAGAGCTGTCAGAATGCAGCACAGCTCCCCCCAGTGTTTCAGGTaGGTGGGCTGTGAGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: GCSVAFPCHRAVRMQHSSPQCFR*VGCEDS Trigger: GGAGTCCTCACAGCCCACCCACCTGAAACACTGGGG...GGAGCTGTGCTGCATTCTGACAGCTCTGTGGCATGGAAAGGCCACACTGCACCC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR-3UTR GCA 90 bp | CACTGCCAGAAACAATCCATGGCCACCCAGGGAGGGTCCCAGCACTTAATCTCCGACCTTAGAACAGGGTaGCTGCTCAGTGCTGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: HCQKQSMATQGGSQHLISDLRTG*LLSAGA Trigger: AGCCCCAGCACTGAGCAGGCACCCTGTTCTAAGGTC...GGAGATTAAGTGCTGGGACCCTCCCTGGGTGGCCATGGATTGTTTCTGGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCCAGTGAGGCTGGACGCCCCTCAAAGTTTCCTGCACTCATGGACTGTGAGGCGTGCTTGTGCTAGCTaGCTATGGTGGACCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: CPVRLDAPQSFLHSWTVRRACAS*LWWTSP Trigger: TGGACTGGTCCACCATAGCCAGCTAGCACAAGCACG...CCTCACAGTCCATGAGTGCAGGAAACTTTGAGGGGCGTCCAGCCTCACTGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR CAA 90 bp | AGCCCCAGTGTTTCAGGTGGGTGGGCTGTGAGGACTCCATGTTCATaGTGTCAGGTGTCAGAAGTGGTCCTGAGGCTCAGTGAGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: SPSVSGGWAVRTPCS*CQVSEVVLRLSEAT Trigger: TGTGGCCTCACTGAGCCTCAGGACCACTTCTGACACCTGACACAATGAACATGGAGTCCTCACAGCCCACCCACCTGAAACACTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR-3UTR TCA 90 bp | TGCCCAGTGAGGCTGGACGCCCCTCAAAGTTTCCTGCACTCATGGACTGTGAGGTTTCTTGCCCCATCCTaGGACAGCTTGTGTGAACCC | + |
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Preference number: 2 (lower is better) Translates to: CPVRLDAPQSFLHSWTVRFLAPS*DSLCEP Trigger: GGGTTCACACAAGCTGTCTCAGGATGGGGCAAGAAA...CCTCACAGTCCATGAGTGCAGGAAACTTTGAGGGGCGTCCAGCCTCACTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGCCAGAAACAATCCATGGCCACCCAGGGAGGGTCCCAGCACTTAATCTCCGGAGCCTCTGGCTCTTaGTGTCAAGGGTCATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: HCQKQSMATQGGSQHLISGASGS*CQGSCQ Trigger: TTGACATGACCCTTGACATCAAGAGCCAGAGGCTCC...GGAGATTAAGTGCTGGGACCCTCCCTGGGTGGCCATGGATTGTTTCTGGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTCCATGCCACAGAGCTGTCAGAATGCAGCACAGCTCCAGCAGCCACGGTGTGTGCAGGCCAGAGCATaGGAGGATAACAGGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LSMPQSCQNAAQLQQPRCVQARA*EDNRRK Trigger: CTTTCTCCTGTTATCCTCGCATGCTCTGGCCTGCAC...ACACCGTGGCTGCTGGAGCTGTGCTGCATTCTGACAGCTCTGTGGCATGGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCACTTAATCTCCATTGTGGCTACAGGGAGCCTCTGGCTCTTGATGTCAAGGTTAGAACAGGGTGCCTaGTCAGTGCTGGGGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: QHLISIVATGSLWLLMSRLEQGA*SVLGLG Trigger: ACCCAGCCCCAGCACTGAGCAGGCACCCTGTTCTAA...CCTTGACATCAAGAGCCAGAGGCTCCCTGTAGCCACAATGGAGATTAAGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR CAA 90 bp | TCCAGCAGCCACGGTGTTGCAGTCTGTCTGTCCACGCAGTGCGCGTaGTGTCCACACAATAATAAACTGTTCACTGTCCAAACTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSSHGVAVCLSTQCA*CPHNNKLFTVQTQA Trigger: AGCCTGAGTTTGGACAGTGAACAGTTTATTATTGTGTGGACACAACGCGCACTGCGTGGACAGACAGACTGCAACACCGTGGCTGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR-3UTR CCA 90 bp | ATCGTTTATCTGCTCCAGTATCGATGCTTGACAAAGCTCCATTATTATTACTGTTCACTTCACTCCAGGTaGGCTGCTCACCTCAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: IVYLLQYRCLTKLHYYYCSLHSR*AAHLRL Trigger: TAACCTGAGGTGAGCAGCCCACCTGGAGTGAAGTGA...ACAGTAATAATAATGGAGCTTTGTCAAGCATCGATACTGGAGCAGATAAACGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR-3UTR GCA 90 bp | ATCGTTTATCTGCTCCAGTATCGATGCTTGACAAAGCTCCATTATTATTACTGTGTTCTAAAGCTATTTTaGTGTTCCTCTTTCTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: IVYLLQYRCLTKLHYYYCVLKLF*CSSFLP Trigger: GGGCAAGAAAGAGGAACAGCAAAATAGCTTTAGAAC...ACAGTAATAATAATGGAGCTTTGTCAAGCATCGATACTGGAGCAGATAAACGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR GCA 72 bp | CAGGCTCTGGCTCACTCTCACGCGCCGGCTCTTGGCTaGCCTGGTGGAAATGTGCAGGCCAGAGCATGCGAG | + |
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Preference number: 3 (lower is better) Translates to: QALAHSHAPALG*PGGNVQARACE Trigger: CTCGCATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCGGCGCGTGAGAGTGAGCCAGAGCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR CCA 72 bp | GTGAGGCTGGACGCCCCTCAAAGTTTCCTGCACTCATaGACTGTGAGGCAGCCACAGCAGCTGCGCCGAGGC | + |
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Preference number: 3 (lower is better) Translates to: VRLDAPQSFLHS*TVRQPQQLRRG Trigger: GCCTCGGCGCAGCTGCTGTGGCTGCCTCACAGTCCATGAGTGCAGGAAACTTTGAGGGGCGTCCAGCCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR CCA 72 bp | AACTCAGGCTCTGGCTCACTCTCACGCGCCGGCTCTTaGCTGCCCTGGTGGAAATGTGCAGGCCAGAGCATG | + |
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Preference number: 3 (lower is better) Translates to: NSGSGSLSRAGS*LPWWKCAGQSM Trigger: CATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCGGCGCGTGAGAGTGAGCCAGAGCCTGAGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR CCA 72 bp | GGTGCCTCAGCTGACAGGGAGCAGCTGGGTGCAGTGTaGCCTTTCCATGCCACAGAGCTGTCAGAATGCAGC | + |
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Preference number: 3 (lower is better) Translates to: GASADREQLGAV*PFHATELSECS Trigger: GCTGCATTCTGACAGCTCTGTGGCATGGAAAGGCCACACTGCACCCAGCTGCTCCCTGTCAGCTGAGGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR GCA 72 bp | TGTCAGAATGCAGCACAGCTCCAGCAGCCACGGTGTTaGAGTCTGTCTGTCCACGCAGTGCGCGTTGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: CQNAAQLQQPRC*SLSVHAVRVVS Trigger: GGACACAACGCGCACTGCGTGGACAGACAGACTGCAACACCGTGGCTGCTGGAGCTGTGCTGCATTCTGACA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR TCA 72 bp | CACAACAGACCCAGAAGCAGCTTAGACTGCAGAAGCTaGTGCAGGCACACGGGCAGGAGGCGTATGGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: HNRPRSSLDCRS*CRHTGRRRMAA Trigger: AGCAGCCATACGCCTCCTGCCCGTGTGCCTGCATCAGCTTCTGCAGTCTAAGCTGCTTCTGGGTCTGTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
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| 3UTR GCA 72 bp | GCAGTGTGGCCTTTCCATGCCACAGAGCTGTCAGAATaGAGCACAGCTCCAGCAGCCACGGTGTTGCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: AVWPFHATELSE*STAPAATVLQS Trigger: AGACTGCAACACCGTGGCTGCTGGAGCTGTGCTGCATTCTGACAGCTCTGTGGCATGGAAAGGCCACACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR CCA 72 bp | CCAGGTCCTGCACACAGCCCCAGTGTTTCAGGTGGGTaGGCTGTGAGGACTCCATGTTCATTGTGTCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: PGPAHSPSVSGG*AVRTPCSLCQV Trigger: CACCTGACACAATGAACATGGAGTCCTCACAGCCCACCCACCTGAAACACTGGGGCTGTGTGCAGGACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR TCA 72 bp | CTCCATGTTCATTGTGTCAGGTGTCAGAAGTGGTCCTaGGGCTCAGTGAGGCCACAGGAGGCTTCCACCACC | + |
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Preference number: 3 (lower is better) Translates to: LHVHCVRCQKWS*GSVRPQEASTT Trigger: GGTGGTGGAAGCCTCCTGTGGCCTCACTGAGCCTCAGGACCACTTCTGACACCTGACACAATGAACATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR TCA 72 bp | CTGCACACAGCCCCAGTGTTTCAGGTGGGTGGGCTGTaGGGACTCCATGTTCATTGTGTCAGGTGTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: LHTAPVFQVGGL*GLHVHCVRCQK Trigger: CTTCTGACACCTGACACAATGAACATGGAGTCCTCACAGCCCACCCACCTGAAACACTGGGGCTGTGTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR TCA 72 bp | GTCAATATGGCCAGGAGAGTAGCCATGGGGACCTTGTaGACTCCAATGGCCACCAGGACCTTAGAACAGGGT | + |
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Preference number: 3 (lower is better) Translates to: VNMARRVAMGTL*TPMATRTLEQG Trigger: ACCCTGTTCTAAGGTCCTGGTGGCCATTGGAGTTCACAAGGTCCCCATGGCTACTCTCCTGGCCATATTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR TCA 72 bp | TCACTTCACTCCAGGTGGGCTGCTCACCTCAGGTTATaGGAGGCCTCACAGTTGAAGATGCACTGGAGCACA | + |
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Preference number: 3 (lower is better) Translates to: SLHSRWAAHLRL*EASQLKMHWST Trigger: TGTGCTCCAGTGCATCTTCAACTGTGAGGCCTCTCATAACCTGAGGTGAGCAGCCCACCTGGAGTGAAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR CCA 72 bp | ACAATAATAAACTGTTCACTGTCCAAACTCAGGCTCTaGCTCACTCTCACGCGCCGGCTCTTGGCTGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: TIINCSLSKLRL*LTLTRRLLAAL Trigger: CAGGGCAGCCAAGAGCCGGCGCGTGAGAGTGAGCCAGAGCCTGAGTTTGGACAGTGAACAGTTTATTATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR TCA 72 bp | AAAGCTATTTTGCTGTTCCTCTTTCTTGCCCCATCCTaGGACAGCTTGTGTGAACCCTGCCACAGGCAGCCG | + |
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Preference number: 3 (lower is better) Translates to: KAILLFLFLAPS*DSLCEPCHRQP Trigger: CGGCTGCCTGTGGCAGGGTTCACACAAGCTGTCTCAGGATGGGGCAAGAAAGAGGAACAGCAAAATAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR GCA 72 bp | AGCAGCCACGGTGTTGCAGTCTGTCTGTCCACGCAGTaGGCGTTGTGTCCACACAATAATAAACTGTTCACT | + |
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Preference number: 3 (lower is better) Translates to: SSHGVAVCLSTQ*ALCPHNNKLFT Trigger: AGTGAACAGTTTATTATTGTGTGGACACAACGCGCACTGCGTGGACAGACAGACTGCAACACCGTGGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR TCA 72 bp | TTGACAAAGCTCCATTATTATTACTGTGAGTGGCAGTaGCACTGCCCAGTGAGGCTGGACGCCCCTCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: LTKLHYYYCEWQ*HCPVRLDAPQS Trigger: ACTTTGAGGGGCGTCCAGCCTCACTGGGCAGTGTCACTGCCACTCACAGTAATAATAATGGAGCTTTGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR TCA 72 bp | GTATCGATGCTTGACAAAGCTCCATTATTATTACTGTaGGTGGCAGTGACACTGCCCAGTGAGGCTGGACGC | + |
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Preference number: 3 (lower is better) Translates to: VSMLDKAPLLLL*VAVTLPSEAGR Trigger: GCGTCCAGCCTCACTGGGCAGTGTCACTGCCACTCACAGTAATAATAATGGAGCTTTGTCAAGCATCGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR GCA 72 bp | GTTCAGGTAAGCCTGGTTACTCTGTATCTATCTACTTaGTGGGCACAACAGACCCAGAAGCAGCTTAGACTG | + |
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Preference number: 3 (lower is better) Translates to: VQVSLVTLYLST*WAQQTQKQLRL Trigger: CAGTCTAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAGTAGATAGATACAGAGTAACCAGGCTTACCTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
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| 3UTR TCA 72 bp | CGTGCTTGTGCTAGCTGGCTATGGTGGACCAGTCCATaGGTTCTAAAGCTATTTTGCTGTTCCTCTTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: RACASWLWWTSP*VLKLFCCSSFL Trigger: CAAGAAAGAGGAACAGCAAAATAGCTTTAGAACTCATGGACTGGTCCACCATAGCCAGCTAGCACAAGCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR-3UTR CAA 90 bp | ATCGTTTATCTGCTCCAGTATCGATGCTTGACAAAGCTCCATTATTATTACTGTATGCACTGGAGCACATaGCTGGGAAGTAGAGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: IVYLLQYRCLTKLHYYYCMHWST*LGSRGL Trigger: CAGGCCTCTACTTCCCAGCAATGTGCTCCAGTGCAT...ACAGTAATAATAATGGAGCTTTGTCAAGCATCGATACTGGAGCAGATAAACGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
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| 3UTR CCA 72 bp | TATAGAGAACACCCCCAAATCACCTGCTTTATTAGATaGCTTCCAAGTTTTCTCCTAGGTGACACTGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: YREHPQITCFIR*LPSFLLGDTVG Trigger: ACCAACAGTGTCACCTAGGAGAAAACTTGGAAGCCATCTAATAAAGCAGGTGATTTGGGGGTGTTCTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| 3UTR TCA 72 bp | GTGGTTGAATCGTTTATCTGCTCCAGTATCGATGCTTaGCAAAGCTCCATTATTATTACTGTGAGTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VVESFICSSIDA*QSSIIITVSGS Trigger: ACTGCCACTCACAGTAATAATAATGGAGCTTTGTCAAGCATCGATACTGGAGCAGATAAACGATTCAACCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
||
| CDS-3UTR CCA 90 bp | CACGCGCCGGCTCTTGGCTGCCCTGGTGGAAATGTGCAGGCCAGAGCATGCGAGATCTCCTTGCGCCTCTaGGTGTGCGGCTGGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HAPALGCPGGNVQARACEISLRL*VCGWSL Trigger: CAGCGACCAGCCGCACACCCAGAGGCGCAAGGAGAT...CTCGCATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCGGCGCGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR CCA 90 bp | CACGCGCCGGCTCTTGGCTGCCCTGGTGGAAATGTGCAGGCCAGAGCATGCGAGCAGGGCCTTGATGGCTaGGTACTTGGCGAGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: HAPALGCPGGNVQARACEQGLDG*VLGEHL Trigger: GAGATGCTCGCCAAGTACCCAGCCATCAAGGCCCTG...CTCGCATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCGGCGCGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR TCA 90 bp | GCGCCGGCTCTTGGCTGCCCTGGTGGAAATGTGCAGGCCAGAGCATGCGAGGATACAGTCCACTTGATGTaGGGGTCTGGCCGCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APALGCPGGNVQARACEDTVHLM*GSGRIR Trigger: CCTGATGCGGCCAGACCCTCACATCAAGTGGACTGT...ATCCTCGCATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR GCA 90 bp | CCGGCTCTTGGCTGCCCTGGTGGAAATGTGCAGGCCAGAGCATGCGAGGATAACCCCACTCGAAGTCGCTaGGGGCCGCGCTATTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PALGCPGGNVQARACEDNPTRSR*GPRYYP Trigger: TGGGTAATAGCGCGGCCCGCAGCGACTTCGAGTGGG...GTTATCCTCGCATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR GCA 90 bp | CGGCTCTTGGCTGCCCTGGTGGAAATGTGCAGGCCAGAGCATGCGAGGATAACAGCTTGCGGGCCGGCGTaGAGAAGAACCAGCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLLAALVEMCRPEHARITACGPA*RRTSPR Trigger: TCGAGGGCTGGTTCTTCTGCACGCCGGCCCGCAAGC...TGTTATCCTCGCATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR GCA 90 bp | CGGCTCTTGGCTGCCCTGGTGGAAATGTGCAGGCCAGAGCATGCGAGGATAACACCAGCCAGAGCAGCTTaGGGGCCGGCGTGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLLAALVEMCRPEHARITPARAA*GPACRR Trigger: TCTTCTGCACGCCGGCCCGCAAGCTGCTCTGGCTGG...TGTTATCCTCGCATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR CCA 90 bp | ATGGACTGTGAGGCAGCCACAGCAGCTGCGCCGAGGCACGGGCACAGCCATCGTAGTAACCGGGGATACTaGGGAAGTCGTGGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MDCEAATAAAPRHGHSHRSNRGY*GSRGVP Trigger: TGGAACACCACGACTTCCCCAGTATCCCCGGTTACT...ACGATGGCTGTGCCCGTGCCTCGGCGCAGCTGCTGTGGCTGCCTCACAGTCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
||
| 3UTR CAA 72 bp | AAACTCAGGCTCTGGCTCACTCTCACGCGCCGGCTCTaGGCTGCCCTGGTGGAAATGTGCAGGCCAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLRLWLTLTRRL*AALVEMCRPEH Trigger: ATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCGGCGCGTGAGAGTGAGCCAGAGCCTGAGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCTCACTCTCACGCGCCGGCTCTTGGCTGCCCTGGTGGAAATGTGCAGGTTGTGCGAGATGTCATaGATGGCCAGTGTCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWLTLTRRLLAALVEMCRLCEMS*MASVSE Trigger: CTCGCTGACACTGGCCATCCATGACATCTCGCACAA...CCTGCACATTTCCACCAGGGCAGCCAAGAGCCGGCGCGTGAGAGTGAGCCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGCTCACTCTCACGCGCCGGCTCTTGGCTGCCCTGGTGGAAATGTGCAGGCAGTAACCGGGGATACTaGGGAAGTCGTGGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGSLSRAGSWLPWWKCAGSNRGY*GSRGVP Trigger: TGGAACACCACGACTTCCCCAGTATCCCCGGTTACT...GCCTGCACATTTCCACCAGGGCAGCCAAGAGCCGGCGCGTGAGAGTGAGCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR TCA 90 bp | CACGCGCCGGCTCTTGGCTGCCCTGGTGGAAATGTGCAGGCCAGAGCATGCGAGAGAGGGCAAAGATGGTaGCATCAAATGCTAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HAPALGCPGGNVQARACERGQRW*HQMLAA Trigger: TGCAGCTAGCATTTGATGTCACCATCTTTGCCCTCT...CTCGCATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCGGCGCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR GCA 90 bp | GGCATATTAGATTTAATTTCGGGCATAGAGGAAGGCAGCTCCGTGGGACTGCCTCCAGCCAGAGCAGCTTaGGGGCCGGCGTGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GILDLISGIEEGSSVGLPPARAA*GPACRR Trigger: TCTTCTGCACGCCGGCCCGCAAGCTGCTCTGGCTGG...AGGCAGTCCCACGGAGCTGCCTTCCTCTATGCCCGAAATTAAATCTAATATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR CCA 90 bp | CGCGCCGGCTCTTGGCTGCCCTGGTGGAAATGTGCAGGCCAGAGCATGCGAGGACGATGGTGGTCCACATaGTACTTTTTGAAGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: RAGSWLPWWKCAGQSMRGRWWST*YFLKDV Trigger: TACATCCTTCAAAAAGTACCATGTGGACCACCATCG...TCCTCGCATGCTCTGGCCTGCACATTTCCACCAGGGCAGCCAAGAGCCGGCGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCCATGCCACAGAGCTGTCAGAATGCAGCACAGCTCCAGCAGCCACGGTGTTACGTGTCACTACCTTaGGGTTCACACAGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSMPQSCQNAAQLQQPRCYVSLP*GSHREA Trigger: GGCCTCTCTGTGTGAACCCCAAGGTAGTGACACGTA...ACACCGTGGCTGCTGGAGCTGTGCTGCATTCTGACAGCTCTGTGGCATGGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCCATGCCACAGAGCTGTCAGAATGCAGCACAGCTCCAGCAGCCACGGTGTGTTCCAGTCATCCAGTaGCAGGTAGTAACCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSMPQSCQNAAQLQQPRCVPVIQ*QVVTGD Trigger: ATCCCCGGTTACTACCTGCCACTGGATGACTGGAAC...ACACCGTGGCTGCTGGAGCTGTGCTGCATTCTGACAGCTCTGTGGCATGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR TCA 90 bp | ACAATAATAAACTGTTCACTGTCCAAACTCAGGCTCTGGCTCACTCTCACGCGCGCCGCATCAGGGCCTTaGTGGCTGGGTACTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TIINCSLSKLRLWLTLTRAASGP*WLGTWR Trigger: TCGCCAAGTACCCAGCCATCAAGGCCCTGATGCGGC...GCGCGTGAGAGTGAGCCAGAGCCTGAGTTTGGACAGTGAACAGTTTATTATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR GCA 90 bp | CACTGCCAGAAACAATCCATGGCCACCCAGGGAGGGTCCCAGCACTTAATCTCCCCAAAGGCAGTATTGTaGGAGATGTCATGGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HCQKQSMATQGGSQHLISPKAVL*EMSWMA Trigger: GGCCATCCATGACATCTCGCACAATACTGCCTTTGG...GGAGATTAAGTGCTGGGACCCTCCCTGGGTGGCCATGGATTGTTTCTGGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR GCA 90 bp | TGGTTACTCTGTATCTATCTACTTGCTGGGCACAACAGACCCAGAAGCAGCTTAGCTTGCGGGCCGGCGTaGAGAAGAACCAGCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WLLCIYLLAGHNRPRSSLACGPA*RRTSPR Trigger: TCGAGGGCTGGTTCTTCTGCACGCCGGCCCGCAAGC...TAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAGTAGATAGATACAGAGTAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR CCA 90 bp | AGATTTAATTTCGGGCATAGAGGAAGGCAGCTCCGTGGGACTGCCTGCTCCGTAGCCAGTGTCAGCGAGTaGTTGATGCAGCCACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFNFGHRGRQLRGTACSVASVSE*LMQPPK Trigger: CTTTGGTGGCTGCATCAACCACTCGCTGACACTGGC...TACGGAGCAGGCAGTCCCACGGAGCTGCCTTCCTCTATGCCCGAAATTAAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| 3UTR CAA 72 bp | GTTTCAGGTGGGTGGGCTGTGAGGACTCCATGTTCATaGTGTCAGGTGTCAGAAGTGGTCCTGAGGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGGWAVRTPCS*CQVSEVVLRLS Trigger: ACTGAGCCTCAGGACCACTTCTGACACCTGACACAATGAACATGGAGTCCTCACAGCCCACCCACCTGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR TCA 90 bp | TGGTTACTCTGTATCTATCTACTTGCTGGGCACAACAGACCCAGAAGCAGCTTAGCCGCATCAGGGCCTTaGTGGCTGGGTACTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: WLLCIYLLAGHNRPRSSLAASGP*WLGTWR Trigger: TCGCCAAGTACCCAGCCATCAAGGCCCTGATGCGGC...TAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAGTAGATAGATACAGAGTAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR TCA 90 bp | ATTAGATTTAATTTCGGGCATAGAGGAAGGCAGCTCCGTGGGACTGCCTGCTCCGTGTCAGCGAGTGGTTaGTGCAGCCACCAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IRFNFGHRGRQLRGTACSVSASG*CSHQRH Trigger: ATGCCTTTGGTGGCTGCATCAACCACTCGCTGACAC...GGAGCAGGCAGTCCCACGGAGCTGCCTTCCTCTATGCCCGAAATTAAATCTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR CCA 90 bp | TGGTTACTCTGTATCTATCTACTTGCTGGGCACAACAGACCCAGAAGCAGCTTAATCTCCTTGCGCCTCTaGGTGTGCGGCTGGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLLCIYLLAGHNRPRSSLISLRL*VCGWSL Trigger: CAGCGACCAGCCGCACACCCAGAGGCGCAAGGAGAT...TAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAGTAGATAGATACAGAGTAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR CCA 90 bp | ATTAGATTTAATTTCGGGCATAGAGGAAGGCAGCTCCGTGGGACTGCCTGCTCCCTTGATGTGAGGGTCTaGCCGCATCAGGGCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IRFNFGHRGRQLRGTACSLDVRV*PHQGLD Trigger: ATCAAGGCCCTGATGCGGCCAGACCCTCACATCAAG...GGAGCAGGCAGTCCCACGGAGCTGCCTTCCTCTATGCCCGAAATTAAATCTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR CCA 90 bp | CAGCACTTAATCTCCATTGTGGCTACAGGGAGCCTCTGGCTCTTGATGTCAAGGGCCAGTGTCAGCGAGTaGTTGATGCAGCCACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHLISIVATGSLWLLMSRASVSE*LMQPPK Trigger: CTTTGGTGGCTGCATCAACCACTCGCTGACACTGGC...CCTTGACATCAAGAGCCAGAGGCTCCCTGTAGCCACAATGGAGATTAAGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR TCA 90 bp | CTCACTTCACTCCAGGTGGGCTGCTCACCTCAGGTTATGAGAGGCCTCACAGTTAGAGGGCAAAGATGGTaGCATCAAATGCTAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSLQVGCSPQVMRGLTVRGQRW*HQMLAA Trigger: TGCAGCTAGCATTTGATGTCACCATCTTTGCCCTCT...AACTGTGAGGCCTCTCATAACCTGAGGTGAGCAGCCCACCTGGAGTGAAGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222255.2 |
||
| CDS-3UTR CCA 90 bp | ATTAGATTTAATTTCGGGCATAGAGGAAGGCAGCTCCGTGGGACTGCCTGCTCCAGTAACCGGGGATACTaGGGAAGTCGTGGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRFNFGHRGRQLRGTACSSNRGY*GSRGVP Trigger: TGGAACACCACGACTTCCCCAGTATCCCCGGTTACT...GGAGCAGGCAGTCCCACGGAGCTGCCTTCCTCTATGCCCGAAATTAAATCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR TCA 90 bp | TTACTCTGTATCTATCTACTTGCTGGGCACAACAGACCCAGAAGCAGCTTAGACACAGTCCACTTGATGTaGGGGTCTGGCCGCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLCIYLLAGHNRPRSSLDTVHLM*GSGRIR Trigger: CCTGATGCGGCCAGACCCTCACATCAAGTGGACTGT...GTCTAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAGTAGATAGATACAGAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR GCA 90 bp | GACTATAAAGGCATATTAGATTTAATTTCGGGCATAGAGGAAGGCAGCTCCGTGCCCACTCGAAGTCGCTaGGGGCCGCGCTATTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: DYKGILDLISGIEEGSSVPTRSR*GPRYYP Trigger: TGGGTAATAGCGCGGCCCGCAGCGACTTCGAGTGGG...CACGGAGCTGCCTTCCTCTATGCCCGAAATTAAATCTAATATGCCTTTATAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR CCA 90 bp | GGCATATTAGATTTAATTTCGGGCATAGAGGAAGGCAGCTCCGTGGGACTGCCTTTGTGCGAGATGTCATaGATGGCCAGTGTCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GILDLISGIEEGSSVGLPLCEMS*MASVSE Trigger: CTCGCTGACACTGGCCATCCATGACATCTCGCACAA...AGGCAGTCCCACGGAGCTGCCTTCCTCTATGCCCGAAATTAAATCTAATATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| 3UTR CAA 72 bp | CACGGTGTTGCAGTCTGTCTGTCCACGCAGTGCGCGTaGTGTCCACACAATAATAAACTGTTCACTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HGVAVCLSTQCA*CPHNNKLFTVQ Trigger: TTGGACAGTGAACAGTTTATTATTGTGTGGACACAACGCGCACTGCGTGGACAGACAGACTGCAACACCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR CCA 90 bp | GACTATAAAGGCATATTAGATTTAATTTCGGGCATAGAGGAAGGCAGCTCCGTGCAGGGCCTTGATGGCTaGGTACTTGGCGAGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DYKGILDLISGIEEGSSVQGLDG*VLGEHL Trigger: GAGATGCTCGCCAAGTACCCAGCCATCAAGGCCCTG...CACGGAGCTGCCTTCCTCTATGCCCGAAATTAAATCTAATATGCCTTTATAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR CCA 90 bp | GTTACTCTGTATCTATCTACTTGCTGGGCACAACAGACCCAGAAGCAGCTTAGATACGTGTCACTACCTTaGGGTTCACACAGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTLYLSTCWAQQTQKQLRYVSLP*GSHREA Trigger: GGCCTCTCTGTGTGAACCCCAAGGTAGTGACACGTA...TCTAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAGTAGATAGATACAGAGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR GCA 90 bp | TGGTTACTCTGTATCTATCTACTTGCTGGGCACAACAGACCCAGAAGCAGCTTACCAAAGGCAGTATTGTaGGAGATGTCATGGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WLLCIYLLAGHNRPRSSLPKAVL*EMSWMA Trigger: GGCCATCCATGACATCTCGCACAATACTGCCTTTGG...TAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAGTAGATAGATACAGAGTAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR GCA 90 bp | TGGTTACTCTGTATCTATCTACTTGCTGGGCACAACAGACCCAGAAGCAGCTTAGGGAGACACAACTTGTaGCAAAGGCAGTATTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: WLLCIYLLAGHNRPRSSLGRHNL*QRQYCA Trigger: CGCACAATACTGCCTTTGGCACAAGTTGTGTCTCCC...TAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAGTAGATAGATACAGAGTAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR CCA 90 bp | ATTAGATTTAATTTCGGGCATAGAGGAAGGCAGCTCCGTGGGACTGCCTGCTCCCGATGGTGGTCCACATaGTACTTTTTGAAGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: IRFNFGHRGRQLRGTACSRWWST*YFLKDV Trigger: TACATCCTTCAAAAAGTACCATGTGGACCACCATCG...GGAGCAGGCAGTCCCACGGAGCTGCCTTCCTCTATGCCCGAAATTAAATCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR TCA 90 bp | GTTACTCTGTATCTATCTACTTGCTGGGCACAACAGACCCAGAAGCAGCTTAGAAGAGGGCAAAGATGGTaGCATCAAATGCTAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTLYLSTCWAQQTQKQLRRGQRW*HQMLAA Trigger: TGCAGCTAGCATTTGATGTCACCATCTTTGCCCTCT...TCTAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAGTAGATAGATACAGAGTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR GCA 90 bp | TGGTTACTCTGTATCTATCTACTTGCTGGGCACAACAGACCCAGAAGCAGCTTAGTCATAATATTCAGGTaGAATCTTCCGCACCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLLCIYLLAGHNRPRSSLVIIFR*NLPHQW Trigger: CCACTGGTGCGGAAGATTGCACCTGAATATTATGAC...TAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAGTAGATAGATACAGAGTAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR CAA 90 bp | CACTGCCAGAAACAATCCATGGCCACCCAGGGAGGGTCCCAGCACTTAATCTCCACCAGCCAGAGCAGCTaGCGGGCCGGCGTGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HCQKQSMATQGGSQHLISTSQSS*RAGVQK Trigger: CTTCTGCACGCCGGCCCGCAAGCTGCTCTGGCTGGT...GGAGATTAAGTGCTGGGACCCTCCCTGGGTGGCCATGGATTGTTTCTGGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR CAA 90 bp | CACTGCCAGAAACAATCCATGGCCACCCAGGGAGGGTCCCAGCACTTAATCTCCGGCCGCATCAGGGCCTaGATGGCTGGGTACTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HCQKQSMATQGGSQHLISGRIRA*MAGYLA Trigger: CGCCAAGTACCCAGCCATCAAGGCCCTGATGCGGCC...GGAGATTAAGTGCTGGGACCCTCCCTGGGTGGCCATGGATTGTTTCTGGCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
||
| CDS-3UTR CAA 90 bp | TGGGCACAACAGACCCAGAAGCAGCTTAGACTGCAGAAGCTGATGCAGGCACACACCAGCCAGAGCAGCTaGCGGGCCGGCGTGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WAQQTQKQLRLQKLMQAHTSQSS*RAGVQK Trigger: CTTCTGCACGCCGGCCCGCAAGCTGCTCTGGCTGGT...GTGTGCCTGCATCAGCTTCTGCAGTCTAAGCTGCTTCTGGGTCTGTTGTGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS-3UTR CAA 90 bp | AGATTTAATTTCGGGCATAGAGGAAGGCAGCTCCGTGGGACTGCCTGCTCCGTAGGCCGCATCAGGGCCTaGATGGCTGGGTACTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RFNFGHRGRQLRGTACSVGRIRA*MAGYLA Trigger: CGCCAAGTACCCAGCCATCAAGGCCCTGATGCGGCC...TACGGAGCAGGCAGTCCCACGGAGCTGCCTTCCTCTATGCCCGAAATTAAATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
||
| CDS CCA 90 bp | CTGAACCAGTACCATTCCCGACACAGTCCACTTGATGTGAGGGTCTaGCCGCATCAGGGCCTTGATGGCTGGGTACTTGGCGAGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LNQYHSRHSPLDVRV*PHQGLDGWVLGEHL Trigger: GAGATGCTCGCCAAGTACCCAGCCATCAAGGCCCTGATGCGGCCAGACCCTCACATCAAGTGGACTGTGTCGGGAATGGTACTGGTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021691.6 ENSMUST00000167978.9 |
||
| CDS GCA 90 bp | GGCTTGATCCCCCAGAGGGCAAAGATGGTGACATCAAATGCTAGCTaGACCAGGGCGTTGAGGATCTCCATACGTGTCACTACCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLIPQRAKMVTSNAS*TRALRISIRVTTLG Trigger: CCCCAAGGTAGTGACACGTATGGAGATCCTCAACGCCCTGGTGCAGCTAGCATTTGATGTCACCATCTTTGCCCTCTGGGGGATCAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021691.6 ENSMUST00000167978.9 |
||
| CDS GCA 90 bp | TTTCACCCAGGAGTGGTGCTGCGGCAGGTGGTCATAATATTCAGGTaGAATCTTCCGCACCAGTGGCAGGTAGTAACCGGGGATACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FHPGVVLRQVVIIFR*NLPHQWQVVTGDTG Trigger: CCCAGTATCCCCGGTTACTACCTGCCACTGGTGCGGAAGATTGCACCTGAATATTATGACCACCTGCCGCAGCACCACTCCTGGGTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
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| CDS-3UTR CAA 90 bp | ACACTGCCAGAAACAATCCATGGCCACCCAGGGAGGGTCCCAGCACTTAATCTCAGTGTCAGCGAGTGGTaGATGCAGCCACCAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: TLPETIHGHPGRVPALNLSVSEW*MQPPKA Trigger: TGCCTTTGGTGGCTGCATCAACCACTCGCTGACACT...GAGATTAAGTGCTGGGACCCTCCCTGGGTGGCCATGGATTGTTTCTGGCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| CDS TCA 90 bp | CAGTATTGTGCGAGATGTCATGGATGGCCAGTGTCAGCGAGTGGTTaGTGCAGCCACCAAAGGCATAGGCCCAAAATAGCAGCCATCGCC | + |
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Preference number: 5 (lower is better) Translates to: QYCARCHGWPVSASG*CSHQRHRPKIAAIA Trigger: GGCGATGGCTGCTATTTTGGGCCTATGCCTTTGGTGGCTGCATCAACCACTCGCTGACACTGGCCATCCATGACATCTCGCACAATACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021691.6 ENSMUST00000167978.9 |
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| CDS-3UTR CAA 90 bp | CCATGTTCATTGTGTCAGGTGTCAGAAGTGGTCCTGAGGCTCAGTGAGGCCACAATACGTGTCACTACCTaGGGGTTCACACAGAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PCSLCQVSEVVLRLSEATIRVTT*GFTQRG Trigger: GCCTCTCTGTGTGAACCCCAAGGTAGTGACACGTAT...TGTGGCCTCACTGAGCCTCAGGACCACTTCTGACACCTGACACAATGAACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| CDS-3UTR CAA 90 bp | ATTAGATTTAATTTCGGGCATAGAGGAAGGCAGCTCCGTGGGACTGCCTGCTCCATACGTGTCACTACCTaGGGGTTCACACAGAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: IRFNFGHRGRQLRGTACSIRVTT*GFTQRG Trigger: GCCTCTCTGTGTGAACCCCAAGGTAGTGACACGTAT...GGAGCAGGCAGTCCCACGGAGCTGCCTTCCTCTATGCCCGAAATTAAATCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
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| CDS-3UTR CAA 90 bp | TGGTTACTCTGTATCTATCTACTTGCTGGGCACAACAGACCCAGAAGCAGCTTAAGTGTCAGCGAGTGGTaGATGCAGCCACCAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: WLLCIYLLAGHNRPRSSLSVSEW*MQPPKA Trigger: TGCCTTTGGTGGCTGCATCAACCACTCGCTGACACT...TAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAGTAGATAGATACAGAGTAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
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| CDS-3UTR CAA 90 bp | TTACTCTGTATCTATCTACTTGCTGGGCACAACAGACCCAGAAGCAGCTTAGACGTGCCAAAGGCAGTATaGTGCGAGATGTCATGGATG | + |
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Preference number: 5 (lower is better) Translates to: LLCIYLLAGHNRPRSSLDVPKAV*CEMSWM Trigger: CATCCATGACATCTCGCACAATACTGCCTTTGGCAC...GTCTAAGCTGCTTCTGGGTCTGTTGTGCCCAGCAAGTAGATAGATACAGAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
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| CDS CCA 72 bp | GATGTGAGGGTCTGGCCGCATCAGGGCCTTGATGGCTaGGTACTTGGCGAGCATCTCCTTGCGCCTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: DVRVWPHQGLDG*VLGEHLLAPLG Trigger: ACCCAGAGGCGCAAGGAGATGCTCGCCAAGTACCCAGCCATCAAGGCCCTGATGCGGCCAGACCCTCACATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021691.6 ENSMUST00000167978.9 |
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| CDS GCA 72 bp | AATAGAAGAAAGGCTGAAGCACCAGCCAGAGCAGCTTaGGGGCCGGCGTGCAGAAGAACCAGCCCTCGAAGT | + |
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Preference number: 6 (lower is better) Translates to: NRRKAEAPARAA*GPACRRTSPRS Trigger: ACTTCGAGGGCTGGTTCTTCTGCACGCCGGCCCGCAAGCTGCTCTGGCTGGTGCTTCAGCCTTTCTTCTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021691.6 ENSMUST00000167978.9 |
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| CDS CCA 72 bp | TACCATTCCCGACACAGTCCACTTGATGTGAGGGTCTaGCCGCATCAGGGCCTTGATGGCTGGGTACTTGGC | + |
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Preference number: 6 (lower is better) Translates to: YHSRHSPLDVRV*PHQGLDGWVLG Trigger: GCCAAGTACCCAGCCATCAAGGCCCTGATGCGGCCAGACCCTCACATCAAGTGGACTGTGTCGGGAATGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021691.6 ENSMUST00000167978.9 |
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| CDS CCA 72 bp | TCTTCCGCACCAGTGGCAGGTAGTAACCGGGGATACTaGGGAAGTCGTGGTGTTCCATGTGGTAACCCACAT | + |
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Preference number: 6 (lower is better) Translates to: SSAPVAGSNRGY*GSRGVPCGNPH Trigger: ATGTGGGTTACCACATGGAACACCACGACTTCCCCAGTATCCCCGGTTACTACCTGCCACTGGTGCGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021691.6 |
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| CDS CCA 72 bp | CAGCACATCTCTTCTCACTGGGTTCCAGTCATCCAGTaGCAGGTAGTAACCGGGGATACTGGGGAAGTCGTG | + |
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Preference number: 6 (lower is better) Translates to: QHISSHWVPVIQ*QVVTGDTGEVV Trigger: CACGACTTCCCCAGTATCCCCGGTTACTACCTGCCACTGGATGACTGGAACCCAGTGAGAAGAGATGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| CDS TCA 72 bp | GCGAGATGTCATGGATGGCCAGTGTCAGCGAGTGGTTaGTGCAGCCACCAAAGGCATAGGCCCAAAATAGCA | + |
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Preference number: 6 (lower is better) Translates to: ARCHGWPVSASG*CSHQRHRPKIA Trigger: TGCTATTTTGGGCCTATGCCTTTGGTGGCTGCATCAACCACTCGCTGACACTGGCCATCCATGACATCTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021691.6 ENSMUST00000167978.9 |
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| CDS GCA 72 bp | CCCCAGAGGGCAAAGATGGTGACATCAAATGCTAGCTaGACCAGGGCGTTGAGGATCTCCATACGTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: PQRAKMVTSNAS*TRALRISIRVT Trigger: AGTGACACGTATGGAGATCCTCAACGCCCTGGTGCAGCTAGCATTTGATGTCACCATCTTTGCCCTCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021691.6 ENSMUST00000167978.9 ENSMUST00000222255.2 |
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| CDS CCA 72 bp | TCCAGTCATCCAGTGGCAGGTAGTAACCGGGGATACTaGGGAAGTCGTGGTGTTCCATGTGGTAACCCACAT | + |
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Preference number: 6 (lower is better) Translates to: SSHPVAGSNRGY*GSRGVPCGNPH Trigger: ATGTGGGTTACCACATGGAACACCACGACTTCCCCAGTATCCCCGGTTACTACCTGCCACTGGATGACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167978.9 |
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| CDS CAA 90 bp | CAGAGGGCAAAGATGGTGACATCAAATGCTAGCTGCACCAGGGCGTaGAGGATCTCCATACGTGTCACTACCTTGGGGTTCACACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: QRAKMVTSNASCTRA*RISIRVTTLGFTQR Trigger: TCTCTGTGTGAACCCCAAGGTAGTGACACGTATGGAGATCCTCAACGCCCTGGTGCAGCTAGCATTTGATGTCACCATCTTTGCCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021691.6 ENSMUST00000167978.9 |
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| CDS GCA 72 bp | AGATGGCAAACCAGCGGTTTCGGGAGACACAACTTGTaGCAAAGGCAGTATTGTGCGAGATGTCATGGATGG | + |
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Preference number: 6 (lower is better) Translates to: RWQTSGFGRHNL*QRQYCARCHGW Trigger: CCATCCATGACATCTCGCACAATACTGCCTTTGGCACAAGTTGTGTCTCCCGAAACCGCTGGTTTGCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021691.6 ENSMUST00000167978.9 |
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| CDS CAA 72 bp | AAGATGGTGACATCAAATGCTAGCTGCACCAGGGCGTaGAGGATCTCCATACGTGTCACTACCTTGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: KMVTSNASCTRA*RISIRVTTLGF Trigger: GAACCCCAAGGTAGTGACACGTATGGAGATCCTCAACGCCCTGGTGCAGCTAGCATTTGATGTCACCATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021691.6 ENSMUST00000167978.9 |
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| CDS CAA 72 bp | CAAAGATGGCAAACCAGCGGTTTCGGGAGACACAACTaGTGCCAAAGGCAGTATTGTGCGAGATGTCATGGA | + |
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Preference number: 6 (lower is better) Translates to: QRWQTSGFGRHN*CQRQYCARCHG Trigger: TCCATGACATCTCGCACAATACTGCCTTTGGCACAAGTTGTGTCTCCCGAAACCGCTGGTTTGCCATCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021691.6 ENSMUST00000167978.9 |
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