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Pregenerated sensors for DEFB7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037790

Ensembl transcript IDs: ENSMUST00000047851.4

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp GGAACTTTAATTTGGTTTAAGTTTTGTCCATCTTCATGGAGGAACAAATTCTGGTATGAAAAAGGCCAATaGACCGTTGCAGGCATTCGC +
Preference number: 4 (lower is better)
Translates to: GTLIWFKFCPSSWRNKFWYEKGQ*TVAGIR
Trigger: GCGAATGCCTGCAACGGTGCATTGGCCTTTTTCATA...CCAGAATTTGTTCCTCCATGAAGATGGACAAAACTTAAACCAAATTAAAGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS-3UTR CCA 90 bp GGAACTTTAATTTGGTTTAAGTTTTGTCCATCTTCATGGAGGAACAAATTCTGGGCTAAAAGCTGCAAATaGAGACAGCAACACCAGGAG +
Preference number: 4 (lower is better)
Translates to: GTLIWFKFCPSSWRNKFWAKSCK*RQQHQE
Trigger: CTCCTGGTGTTGCTGTCTCCATTTGCAGCTTTTAGC...CCAGAATTTGTTCCTCCATGAAGATGGACAAAACTTAAACCAAATTAAAGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS-3UTR GCA 90 bp GGAACTTTAATTTGGTTTAAGTTTTGTCCATCTTCATGGAGGAACAAATTCTGGGTCTTGGCTAAAAGCTaGAAATGGAGACAGCAACAC +
Preference number: 4 (lower is better)
Translates to: GTLIWFKFCPSSWRNKFWVLAKS*KWRQQH
Trigger: GTGTTGCTGTCTCCATTTGCAGCTTTTAGCCAAGAC...CCAGAATTTGTTCCTCCATGAAGATGGACAAAACTTAAACCAAATTAAAGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS-3UTR TCA 90 bp GGAACTTTAATTTGGTTTAAGTTTTGTCCATCTTCATGGAGGAACAAATTCTGGCAAGTTCCAATCTTATaGAAAAGGCCAATGCACCGT +
Preference number: 4 (lower is better)
Translates to: GTLIWFKFCPSSWRNKFWQVPIL*KRPMHR
Trigger: ACGGTGCATTGGCCTTTTTCATAAGATTGGAACTTG...CCAGAATTTGTTCCTCCATGAAGATGGACAAAACTTAAACCAAATTAAAGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS-3UTR GCA 90 bp GGAACTTTAATTTGGTTTAAGTTTTGTCCATCTTCATGGAGGAACAAATTCTGGCAACACCAGGAGAAATaGGAACAGAACATAATGGAT +
Preference number: 4 (lower is better)
Translates to: GTLIWFKFCPSSWRNKFWQHQEK*EQNIMD
Trigger: ATCCATTATGTTCTGTTCGCATTTCTCCTGGTGTTG...CCAGAATTTGTTCCTCCATGAAGATGGACAAAACTTAAACCAAATTAAAGTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS-3UTR CCA 90 bp GGAACTTTAATTTGGTTTAAGTTTTGTCCATCTTCATGGAGGAACAAATTCTGGCTTTGTCTTCTTCTCTaGGATTTGAAACTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GTLIWFKFCPSSWRNKFWLCLLL*DLKLAA
Trigger: TGCTGCAAGTTTCAAATCCCAGAGAAGAAGACAAAG...CCAGAATTTGTTCCTCCATGAAGATGGACAAAACTTAAACCAAATTAAAGTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS-3UTR TCA 90 bp GGAACTTTAATTTGGTTTAAGTTTTGTCCATCTTCATGGAGGAACAAATTCTGGTTCTTCTCTGGGATTTaGAACTTGCAGCATTTGAAA +
Preference number: 4 (lower is better)
Translates to: GTLIWFKFCPSSWRNKFWFFSGI*NLQHLK
Trigger: TTTCAAATGCTGCAAGTTTCAAATCCCAGAGAAGAA...CCAGAATTTGTTCCTCCATGAAGATGGACAAAACTTAAACCAAATTAAAGTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS GCA 90 bp TTCCCGATAGCAAGCTCGTTTACTGTTGATGTCTTGGCTAAAAGCTaGAAATGGAGACAGCAACACCAGGAGAAATGCGAACAGAACATA +
Preference number: 5 (lower is better)
Translates to: FPIASSFTVDVLAKS*KWRQQHQEKCEQNI
Trigger: TATGTTCTGTTCGCATTTCTCCTGGTGTTGCTGTCTCCATTTGCAGCTTTTAGCCAAGACATCAACAGTAAACGAGCTTGCTATCGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS TCA 90 bp ACAGGATCTTTGTCTTCTTCTCTGGGATTTGAAACTTGCAGCATTTaGAACGAAAATTACAAGTTCCAATCTTATGAAAAAGGCCAATGC +
Preference number: 5 (lower is better)
Translates to: TGSLSSSLGFETCSI*NENYKFQSYEKGQC
Trigger: GCATTGGCCTTTTTCATAAGATTGGAACTTGTAATTTTCGTTTCAAATGCTGCAAGTTTCAAATCCCAGAGAAGAAGACAAAGATCCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS CAA 90 bp GCATTCGCCTCCTTCCCGATAGCAAGCTCGTTTACTGTTGATGTCTaGGCTAAAAGCTGCAAATGGAGACAGCAACACCAGGAGAAATGC +
Preference number: 6 (lower is better)
Translates to: AFASFPIASSFTVDV*AKSCKWRQQHQEKC
Trigger: GCATTTCTCCTGGTGTTGCTGTCTCCATTTGCAGCTTTTAGCCAAGACATCAACAGTAAACGAGCTTGCTATCGGGAAGGAGGCGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS CAA 72 bp TCCTTCCCGATAGCAAGCTCGTTTACTGTTGATGTCTaGGCTAAAAGCTGCAAATGGAGACAGCAACACCAG +
Preference number: 6 (lower is better)
Translates to: SFPIASSFTVDV*AKSCKWRQQHQ
Trigger: CTGGTGTTGCTGTCTCCATTTGCAGCTTTTAGCCAAGACATCAACAGTAAACGAGCTTGCTATCGGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS GCA 72 bp GCAAGCTCGTTTACTGTTGATGTCTTGGCTAAAAGCTaGAAATGGAGACAGCAACACCAGGAGAAATGCGAA +
Preference number: 6 (lower is better)
Translates to: ASSFTVDVLAKS*KWRQQHQEKCE
Trigger: TTCGCATTTCTCCTGGTGTTGCTGTCTCCATTTGCAGCTTTTAGCCAAGACATCAACAGTAAACGAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS CCA 72 bp TCGTTTACTGTTGATGTCTTGGCTAAAAGCTGCAAATaGAGACAGCAACACCAGGAGAAATGCGAACAGAAC +
Preference number: 6 (lower is better)
Translates to: SFTVDVLAKSCK*RQQHQEKCEQN
Trigger: GTTCTGTTCGCATTTCTCCTGGTGTTGCTGTCTCCATTTGCAGCTTTTAGCCAAGACATCAACAGTAAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4
CDS TCA 72 bp CAGCATTTGAAACGAAAATTACAAGTTCCAATCTTATaGAAAAGGCCAATGCACCGTTGCAGGCATTCGCCT +
Preference number: 6 (lower is better)
Translates to: QHLKRKLQVPIL*KRPMHRCRHSP
Trigger: AGGCGAATGCCTGCAACGGTGCATTGGCCTTTTTCATAAGATTGGAACTTGTAATTTTCGTTTCAAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047851.4