Pregenerated sensors for DEFB50 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058568

Ensembl transcript IDs: ENSMUST00000078879.7

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GCTGCTATAGAAAGAGCAATTGTCACCAAAAACAGCTGTCATTTTTaGCATACACTTGATCCTGACGTGAAATGTACCAGGGTGACTGCC	+
Preference number: 5 (lower is better) Translates to: AAIERAIVTKNSCHF*HTLDPDVKCTRVTA Trigger: GGCAGTCACCCTGGTACATTTCACGTCAGGATCAAGTGTATGCCAAAAATGACAGCTGTTTTTGGTGACAATTGCTCTTTCTATAGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078879.7
CDS CCA 72 bp	GAAAGAGCAATTGTCACCAAAAACAGCTGTCATTTTTaGCATACACTTGATCCTGACGTGAAATGTACCAGG	+
Preference number: 6 (lower is better) Translates to: ERAIVTKNSCHF*HTLDPDVKCTR Trigger: CCTGGTACATTTCACGTCAGGATCAAGTGTATGCCAAAAATGACAGCTGTTTTTGGTGACAATTGCTCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078879.7
CDS GCA 72 bp	ATACAGATTTCGTATTATTACAGAGATCACCCATGCTaGTATAGAAAGAGCAATTGTCACCAAAAACAGCTG	+
Preference number: 6 (lower is better) Translates to: IQISYYYRDHPC*YRKSNCHQKQL Trigger: CAGCTGTTTTTGGTGACAATTGCTCTTTCTATAGCAGCATGGGTGATCTCTGTAATAATACGAAATCTGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078879.7

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