Pregenerated sensors for DEFB48 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000075574

Ensembl transcript IDs: ENSMUST00000100493.3

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ATCTCGTCTTCTATCAGTTTGCAGATGTCTCTTCTGCACGTGCCCTaGAGACTGACGCAGAGCGTCTCAGACGCACCCATCCCACTTCTA	+
Preference number: 5 (lower is better) Translates to: ISSSISLQMSLLHVP*RLTQSVSDAPIPLL Trigger: TAGAAGTGGGATGGGTGCGTCTGAGACGCTCTGCGTCAGTCTGCAGGGCACGTGCAGAAGAGACATCTGCAAACTGATAGAAGACGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100493.3
CDS TCA 72 bp	GTTTGCAGATGTCTCTTCTGCACGTGCCCTGCAGACTaGCGCAGAGCGTCTCAGACGCACCCATCCCACTTC	+
Preference number: 6 (lower is better) Translates to: VCRCLFCTCPAD*RRASQTHPSHF Trigger: GAAGTGGGATGGGTGCGTCTGAGACGCTCTGCGTCAGTCTGCAGGGCACGTGCAGAAGAGACATCTGCAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100493.3
CDS CCA 72 bp	CAGAGCGTCTCAGACGCACCCATCCCACTTCTAACTTaGGGTAAAAGGTCCAAGAGGAAGAATAGAGTAGAG	+
Preference number: 6 (lower is better) Translates to: QSVSDAPIPLLT*GKRSKRKNRVE Trigger: CTCTACTCTATTCTTCCTCTTGGACCTTTTACCCCAAGTTAGAAGTGGGATGGGTGCGTCTGAGACGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100493.3

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