Pregenerated sensors for DEFB40 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053678

Ensembl transcript IDs: ENSMUST00000066258.8

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CCTTGGAGACATTTTATTGTGTCAAGAACAGCAACTGGGTTGATCTaGAAGCATGATAGAAAGAAGATCATCAGTAGAAAGCAGGAGATC	+
Preference number: 5 (lower is better) Translates to: PWRHFIVSRTATGLI*KHDRKKIISRKQEI Trigger: GATCTCCTGCTTTCTACTGATGATCTTCTTTCTATCATGCTTTCAGATCAACCCAGTTGCTGTTCTTGACACAATAAAATGTCTCCAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066258.8
CDS CAA 72 bp	ATGGTACACATGATTTCTGGCAAACCAACGGCGTTTTaGGCAACATCTGCCCTTTCCTTTATAACAGGTGCT	+
Preference number: 6 (lower is better) Translates to: MVHMISGKPTAF*ATSALSFITGA Trigger: AGCACCTGTTATAAAGGAAAGGGCAGATGTTGCCAAAAACGCCGTTGGTTTGCCAGAAATCATGTGTACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066258.8
CDS CAA 72 bp	CCATGGGCATTTCTGAATGTGACAGTTGTTGTTTCCTaGGAGACATTTTATTGTGTCAAGAACAGCAACTGG	+
Preference number: 6 (lower is better) Translates to: PWAFLNVTVVVS*ETFYCVKNSNW Trigger: CCAGTTGCTGTTCTTGACACAATAAAATGTCTCCAAGGAAACAACAACTGTCACATTCAGAAATGCCCATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066258.8
CDS TCA 72 bp	CATTTTATTGTGTCAAGAACAGCAACTGGGTTGATCTaGAAGCATGATAGAAAGAAGATCATCAGTAGAAAG	+
Preference number: 6 (lower is better) Translates to: HFIVSRTATGLI*KHDRKKIISRK Trigger: CTTTCTACTGATGATCTTCTTTCTATCATGCTTTCAGATCAACCCAGTTGCTGTTCTTGACACAATAAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066258.8

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