Pregenerated sensors for DEFB39 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061847

Ensembl transcript IDs: ENSMUST00000075504.3

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TATTCTTTTGAAAACATTGTATTGAATCGTCACCAGAAACTGGGTTaGTCTGGGAGCTGCCTAGAGAGAGGATCAGCAGCAGAAAGTAGG	+
Preference number: 5 (lower is better) Translates to: YSFENIVLNRHQKLG*SGSCLERGSAAESR Trigger: CCTACTTTCTGCTGCTGATCCTCTCTCTAGGCAGCTCCCAGATCAACCCAGTTTCTGGTGACGATTCAATACAATGTTTTCAAAAGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075504.3
CDS CCA 72 bp	CATTGTATTGAATCGTCACCAGAAACTGGGTTGATCTaGGAGCTGCCTAGAGAGAGGATCAGCAGCAGAAAG	+
Preference number: 6 (lower is better) Translates to: HCIESSPETGLI*ELPRERISSRK Trigger: CTTTCTGCTGCTGATCCTCTCTCTAGGCAGCTCCCAGATCAACCCAGTTTCTGGTGACGATTCAATACAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075504.3
CDS CCA 72 bp	TCTGTCATAACACGTGCCGATCTCATCTTGAAAATATaGGCATTGGTTGGTGTGACAGGTGTTATTCTTTTG	+
Preference number: 6 (lower is better) Translates to: SVITRADLILKI*ALVGVTGVILL Trigger: CAAAAGAATAACACCTGTCACACCAACCAATGCCCATATTTTCAAGATGAGATCGGCACGTGTTATGACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075504.3

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