Pregenerated sensors for DEFB35 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058052Ensembl transcript IDs: ENSMUST00000076786.3
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TCTCTCCTTGACCATCCATTCAGCACGGCTTGCAAGGTCCAAAGGCCATTGGTCCTCACTCTCTATGCATaGTCTCCTGCATTTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLLDHPFSTACKVQRPLVLTLYA*SPAFSP Trigger: CGGGGAAAATGCAGGAGAGCATGCATAGAGAGTGAG...GACCAATGGCCTTTGGACCTTGCAAGCCGTGCTGAATGGATGGTCAAGGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076786.3 |
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| CDS-3UTR GCA 90 bp | AGTCACAGATGTTCTCTCCTTGACCATCCATTCAGCACGGCTTGCAAGGTCCAATCTTCTCACTCTCTATaGATGCTCTCCTGCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHRCSLLDHPFSTACKVQSSHSL*MLSCIF Trigger: GAAAATGCAGGAGAGCATGCATAGAGAGTGAGAAGA...TTGGACCTTGCAAGCCGTGCTGAATGGATGGTCAAGGAGAGAACATCTGTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076786.3 |
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