Pregenerated sensors for DEFB26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074680Ensembl transcript IDs: ENSMUST00000099205.2
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | ACCTGCAGGATTGACGGTAGTTCCTGTGGGCATCTTGCCAATACCTaGAGGATTGACAGTAGTTCCTGTGGGTGTCTTGCCAATACCTGC | + |
Preference number: 5 (lower is better) Translates to: TCRIDGSSCGHLANT*RIDSSSCGCLANTC Trigger: GCAGGTATTGGCAAGACACCCACAGGAACTACTGTCAATCCTGCAGGTATTGGCAAGATGCCCACAGGAACTACCGTCAATCCTGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS GCA 90 bp | TGGGAGGTCCTGAGGGTAGTTTGTCTTCTGATAGAGTTCGGTGAATaGAGCATGATACTTTGTTCTTACACAGATATATGTACCGTTCCT | + |
Preference number: 5 (lower is better) Translates to: WEVLRVVCLLIEFGE*SMILCSYTDICTVP Trigger: AGGAACGGTACATATATCTGTGTAAGAACAAAGTATCATGCTGCATTCACCGAACTCTATCAGAAGACAAACTACCCTCAGGACCTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS TCA 90 bp | CATGATACTTTGTTCTTACACAGATATATGTACCGTTCCTCTTCTTaGCATCGGACTCTGCAGTACCCTAAACTATTCTTCCAGCATTTT | + |
Preference number: 5 (lower is better) Translates to: HDTLFLHRYMYRSSS*HRTLQYPKLFFQHF Trigger: AAAATGCTGGAAGAATAGTTTAGGGTACTGCAGAGTCCGATGTCAAGAAGAGGAACGGTACATATATCTGTGTAAGAACAAAGTATCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS GCA 72 bp | ATTGACGGTAGTTCCTGTGGGTGTCTTGCCAATACCTaGAGGATTGACGGTAGTTCCTGTGGGCATCTTGCC | + |
Preference number: 6 (lower is better) Translates to: IDGSSCGCLANT*RIDGSSCGHLA Trigger: GGCAAGATGCCCACAGGAACTACCGTCAATCCTGCAGGTATTGGCAAGACACCCACAGGAACTACCGTCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS CAA 72 bp | GTGGTGGTTGTGGGTGTCTTGCCAATACCAGCAGGATaGACGGTAGTTCCTGTGGGTGTCTTGCCAATACCT | + |
Preference number: 6 (lower is better) Translates to: VVVVGVLPIPAG*TVVPVGVLPIP Trigger: AGGTATTGGCAAGACACCCACAGGAACTACCGTCAATCCTGCTGGTATTGGCAAGACACCCACAACCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS CAA 90 bp | GGATTGACGGTAGTTCCTGTGGGCATCTTGCCAATACCTGCAGGATaGACAGTAGTTCCTGTGGGTGTCTTGCCAATACCTGCAGGATTG | + |
Preference number: 6 (lower is better) Translates to: GLTVVPVGILPIPAG*TVVPVGVLPIPAGL Trigger: CAATCCTGCAGGTATTGGCAAGACACCCACAGGAACTACTGTCAATCCTGCAGGTATTGGCAAGATGCCCACAGGAACTACCGTCAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS CAA 90 bp | GTCTTGCCAATACCTGCAGGATTGACGGTAGTTCCTGTGGGCATCTaGCCAATACCTGCAGGATTGACAGTAGTTCCTGTGGGTGTCTTG | + |
Preference number: 6 (lower is better) Translates to: VLPIPAGLTVVPVGI*PIPAGLTVVPVGVL Trigger: CAAGACACCCACAGGAACTACTGTCAATCCTGCAGGTATTGGCAAGATGCCCACAGGAACTACCGTCAATCCTGCAGGTATTGGCAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS TCA 72 bp | TTTGGTATGGGTCTCCTCCAGGCAGCTTTGTTCCCCTaGGTTAGCAACCCATGGACAATGAAGGCCAGTGTT | + |
Preference number: 6 (lower is better) Translates to: FGMGLLQAALFP*VSNPWTMKASV Trigger: AACACTGGCCTTCATTGTCCATGGGTTGCTAACTCAGGGGAACAAAGCTGCCTGGAGGAGACCCATACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS GCA 72 bp | ATTGACGGTAGTTCCTGTGGGCATCTTGCCAATACCTaGAGGATTGACAGTAGTTCCTGTGGGTGTCTTGCC | + |
Preference number: 6 (lower is better) Translates to: IDGSSCGHLANT*RIDSSSCGCLA Trigger: GGCAAGACACCCACAGGAACTACTGTCAATCCTGCAGGTATTGGCAAGATGCCCACAGGAACTACCGTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS CAA 72 bp | ATACCAGCAGGATTGACGGTAGTTCCTGTGGGTGTCTaGCCAATACCTGCAGGATTGACGGTAGTTCCTGTG | + |
Preference number: 6 (lower is better) Translates to: IPAGLTVVPVGV*PIPAGLTVVPV Trigger: CACAGGAACTACCGTCAATCCTGCAGGTATTGGCAAGACACCCACAGGAACTACCGTCAATCCTGCTGGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS CAA 72 bp | GTAGTTCCTGTGGGCATCTTGCCAATACCTGCAGGATaGACAGTAGTTCCTGTGGGTGTCTTGCCAATACCT | + |
Preference number: 6 (lower is better) Translates to: VVPVGILPIPAG*TVVPVGVLPIP Trigger: AGGTATTGGCAAGACACCCACAGGAACTACTGTCAATCCTGCAGGTATTGGCAAGATGCCCACAGGAACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS CCA 72 bp | TGCAGTACCCTAAACTATTCTTCCAGCATTTTGGTATaGGTCTCCTCCAGGCAGCTTTGTTCCCCTGAGTTA | + |
Preference number: 6 (lower is better) Translates to: CSTLNYSSSILV*VSSRQLCSPEL Trigger: TAACTCAGGGGAACAAAGCTGCCTGGAGGAGACCCATACCAAAATGCTGGAAGAATAGTTTAGGGTACTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS CAA 72 bp | ATACCTGCAGGATTGACAGTAGTTCCTGTGGGTGTCTaGCCAATACCTGCAGGATTGACGATAGTTCCTATG | + |
Preference number: 6 (lower is better) Translates to: IPAGLTVVPVGV*PIPAGLTIVPM Trigger: CATAGGAACTATCGTCAATCCTGCAGGTATTGGCAAGACACCCACAGGAACTACTGTCAATCCTGCAGGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS CAA 90 bp | ATCTTGCCAATACCTGCAGGATTGACAGTAGTTCCTGTGGGTGTCTaGCCAATACCTGCAGGATTGACGATAGTTCCTATGGGTGTTTTA | + |
Preference number: 6 (lower is better) Translates to: ILPIPAGLTVVPVGV*PIPAGLTIVPMGVL Trigger: TAAAACACCCATAGGAACTATCGTCAATCCTGCAGGTATTGGCAAGACACCCACAGGAACTACTGTCAATCCTGCAGGTATTGGCAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS GCA 72 bp | ATTGACAGTAGTTCCTGTGGGTGTCTTGCCAATACCTaGAGGATTGACGATAGTTCCTATGGGTGTTTTAGA | + |
Preference number: 6 (lower is better) Translates to: IDSSSCGCLANT*RIDDSSYGCFR Trigger: TCTAAAACACCCATAGGAACTATCGTCAATCCTGCAGGTATTGGCAAGACACCCACAGGAACTACTGTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS CAA 72 bp | GTAGTTCCTGTGGGTGTCTTGCCAATACCTGCAGGATaGACGATAGTTCCTATGGGTGTTTTAGAGTCATTT | + |
Preference number: 6 (lower is better) Translates to: VVPVGVLPIPAG*TIVPMGVLESF Trigger: AAATGACTCTAAAACACCCATAGGAACTATCGTCAATCCTGCAGGTATTGGCAAGACACCCACAGGAACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |
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CDS GCA 72 bp | CTGAGGGTAGTTTGTCTTCTGATAGAGTTCGGTGAATaGAGCATGATACTTTGTTCTTACACAGATATATGT | + |
Preference number: 6 (lower is better) Translates to: LRVVCLLIEFGE*SMILCSYTDIC Trigger: ACATATATCTGTGTAAGAACAAAGTATCATGCTGCATTCACCGAACTCTATCAGAAGACAAACTACCCTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099205.2 |