Pregenerated sensors for DEFB25 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074678

Ensembl transcript IDs: ENSMUST00000099203.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AGGCAACACAGAGAAGCATCCGGACACAGGTGCATGAAGGTCTCTTaGCTTGTGCAGAAAGTCCGGCAGGCTCCTTGGCCGTTCCAGCAC	+
Preference number: 5 (lower is better) Translates to: RQHREASGHRCMKVS*LVQKVRQAPWPFQH Trigger: GTGCTGGAACGGCCAAGGAGCCTGCCGGACTTTCTGCACAAGGCAAGAGACCTTCATGCACCTGTGTCCGGATGCTTCTCTGTGTTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099203.2
CDS TCA 90 bp	AAGAATAGGACAGGCAACACAGAGAAGCATCCGGACACAGGTGCATaGAGGTCTCTTGCCTTGTGCAGAAAGTCCGGCAGGCTCCTTGGC	+
Preference number: 5 (lower is better) Translates to: KNRTGNTEKHPDTGA*RSLALCRKSGRLLG Trigger: GCCAAGGAGCCTGCCGGACTTTCTGCACAAGGCAAGAGACCTTCATGCACCTGTGTCCGGATGCTTCTCTGTGTTGCCTGTCCTATTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099203.2
CDS CCA 90 bp	TGCATGAAGGTCTCTTGCCTTGTGCAGAAAGTCCGGCAGGCTCCTTaGCCGTTCCAGCACCGTTTGAATTCAGTGCTTCCTGGTGGTACA	+
Preference number: 5 (lower is better) Translates to: CMKVSCLVQKVRQAP*PFQHRLNSVLPGGT Trigger: TGTACCACCAGGAAGCACTGAATTCAAACGGTGCTGGAACGGCCAAGGAGCCTGCCGGACTTTCTGCACAAGGCAAGAGACCTTCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099203.2
CDS CAA 90 bp	CAGGCAACACAGAGAAGCATCCGGACACAGGTGCATGAAGGTCTCTaGCCTTGTGCAGAAAGTCCGGCAGGCTCCTTGGCCGTTCCAGCA	+
Preference number: 6 (lower is better) Translates to: QATQRSIRTQVHEGL*PCAESPAGSLAVPA Trigger: TGCTGGAACGGCCAAGGAGCCTGCCGGACTTTCTGCACAAGGCAAGAGACCTTCATGCACCTGTGTCCGGATGCTTCTCTGTGTTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099203.2
CDS CAA 72 bp	GGTCTCTTGCCTTGTGCAGAAAGTCCGGCAGGCTCCTaGGCCGTTCCAGCACCGTTTGAATTCAGTGCTTCC	+
Preference number: 6 (lower is better) Translates to: GLLPCAESPAGS*AVPAPFEFSAS Trigger: GGAAGCACTGAATTCAAACGGTGCTGGAACGGCCAAGGAGCCTGCCGGACTTTCTGCACAAGGCAAGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099203.2
CDS CAA 90 bp	GTGCATGAAGGTCTCTTGCCTTGTGCAGAAAGTCCGGCAGGCTCCTaGGCCGTTCCAGCACCGTTTGAATTCAGTGCTTCCTGGTGGTAC	+
Preference number: 6 (lower is better) Translates to: VHEGLLPCAESPAGS*AVPAPFEFSASWWY Trigger: GTACCACCAGGAAGCACTGAATTCAAACGGTGCTGGAACGGCCAAGGAGCCTGCCGGACTTTCTGCACAAGGCAAGAGACCTTCATGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099203.2
CDS CCA 72 bp	GTCTCTTGCCTTGTGCAGAAAGTCCGGCAGGCTCCTTaGCCGTTCCAGCACCGTTTGAATTCAGTGCTTCCT	+
Preference number: 6 (lower is better) Translates to: VSCLVQKVRQAP*PFQHRLNSVLP Trigger: AGGAAGCACTGAATTCAAACGGTGCTGGAACGGCCAAGGAGCCTGCCGGACTTTCTGCACAAGGCAAGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099203.2

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