Pregenerated sensors for DEFB22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027468Ensembl transcript IDs: ENSMUST00000028966.3
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AGGCCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTAGCAGTGCTGGCCTTTaGGCTGCTCCCTTCGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: RPLGFNQPGILGQEKRGSSSAGL*AAPFVP Trigger: GGGGACGAAGGGAGCAGCGCAAAGGCCAGCACTGCT...ACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR GCA 90 bp | AGGCCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTGGGAGTGCTGGCCTGTaGGGGAGTGCTGGCAATTGC | + |
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Preference number: 4 (lower is better) Translates to: RPLGFNQPGILGQEKRGSGSAGL*GSAGNC Trigger: GCAATTGCCAGCACTCCCGCACAGGCCAGCACTCCC...ACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR CCA 90 bp | AGGCCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTTCTTTGCGGGAGCGCTaGTCTTTGCGGGAGCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RPLGFNQPGILGQEKRGSSLRER*SLRERW Trigger: CCAGCGCTCCCGCAAAGACCAGCGCTCCCGCAAAGA...ACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR GCA 90 bp | CCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTAGTGTTGCAGGTTCCGTCTaGTTCTCCCCGTCTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: PLGFNQPGILGQEKRGSSVAGSV*FSPSLH Trigger: GTGCAGAGACGGGGAGAAGCAGACGGAACCTGCAAC...ACTACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR GCA 90 bp | CCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTAGTCAACCATTGCAGCAGTaGTGGCCTTTGCGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PLGFNQPGILGQEKRGSSQPLQQ*WPLRCS Trigger: GGAGCAGCGCAAAGGCCAGCACTGCTGCAATGGTTG...ACTACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR TCA 90 bp | CCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTAGTCATACCAGCCACCTGTaGCCAAATGGGCCAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: PLGFNQPGILGQEKRGSSHTSHL*PNGPGT Trigger: TGTTCCTGGCCCATTTGGTCACAGGTGGCTGGTATG...ACTACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR GCA 90 bp | CCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTAGTGCTTCTCCCCGTCTCTaGACATCTTCCTGCAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: PLGFNQPGILGQEKRGSSASPRL*TSSCSC Trigger: GCAACTGCAGGAAGATGTGCAGAGACGGGGAGAAGC...ACTACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR GCA 90 bp | CCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTAGTAGCAGCACCAACCATTaGAGCAGTGCTGGCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: PLGFNQPGILGQEKRGSSSSTNH*SSAGLC Trigger: GCAAAGGCCAGCACTGCTGCAATGGTTGGTGCTGCT...ACTACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR TCA 90 bp | AGGCCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTTGTGACAAGATTATCTaGATTCTGTCCACCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: RPLGFNQPGILGQEKRGSCDKII*ILSTAP Trigger: GGGGGCGGTGGACAGAATTCAGATAATCTTGTCACA...ACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR TCA 90 bp | CCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTAGTCAATTGCAGCAGTGCTaGCCTTTGTGGTATTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PLGFNQPGILGQEKRGSSQLQQC*PLWYCQ Trigger: CTGGCAATACCACAAAGGTCAGCACTGCTGCAATTG...ACTACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR GCA 90 bp | AGGCCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTACATCTTCCTGCAGTTaGCCAATGTGTTTGCACACT | + |
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Preference number: 4 (lower is better) Translates to: RPLGFNQPGILGQEKRGSTSSCS*PMCLHT Trigger: AGTGTGCAAACACATTGGGCAACTGCAGGAAGATGT...ACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 90 bp | GCTGGTCTTTGTGGGAGTGCCAGCCATTGCAGCAGCACCAACCATTaGAGCAGTGCTGGCCTTTGCGCTGCTCCCTTCGTCCCCACCTGC | + |
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Preference number: 5 (lower is better) Translates to: AGLCGSASHCSSTNH*SSAGLCAAPFVPTC Trigger: GCAGGTGGGGACGAAGGGAGCAGCGCAAAGGCCAGCACTGCTGCAATGGTTGGTGCTGCTGCAATGGCTGGCACTCCCACAAAGACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 90 bp | TTGCGGGAGCGCTGGTCTTTGCGGGAGCGCTGGTCTTTGTGGGAGTaGCAGCCATTGCAGCAGCACCAACCATTGCAGCAGTGCTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LRERWSLRERWSLWE*QPLQQHQPLQQCWP Trigger: AGGCCAGCACTGCTGCAATGGTTGGTGCTGCTGCAATGGCTGGCACTCCCACAAAGACCAGCGCTCCCGCAAAGACCAGCGCTCCCGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 90 bp | GCTGGCCTTTGTGGTAGTGCTGGTCTTTGCGGGAGCGCTGGTCTTTaGGGGAGCGCTGGTCTTTGTGGGAGTGCCAGCCATTGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: AGLCGSAGLCGSAGL*GSAGLCGSASHCSS Trigger: GCTGCTGCAATGGCTGGCACTCCCACAAAGACCAGCGCTCCCGCAAAGACCAGCGCTCCCGCAAAGACCAGCACTACCACAAAGGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 90 bp | GCTGGTCTTTGCGGGAGCGCTGGTCTTTGTGGGAGTGCCAGCCATTaGAGCAGCACCAACCATTGCAGCAGTGCTGGCCTTTGCGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: AGLCGSAGLCGSASH*SSTNHCSSAGLCAA Trigger: AGCAGCGCAAAGGCCAGCACTGCTGCAATGGTTGGTGCTGCTGCAATGGCTGGCACTCCCACAAAGACCAGCGCTCCCGCAAAGACCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS TCA 90 bp | TGGGAGTGCTGGCCTGTGCGGGAGTGCTGGCAATTGCAGCAGTGCTaGCCTTTGTGGTATTGCCAGCCATTGTGGCAGCGCTGGCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: WECWPVRECWQLQQC*PLWYCQPLWQRWPL Trigger: CAAAGGCCAGCGCTGCCACAATGGCTGGCAATACCACAAAGGTCAGCACTGCTGCAATTGCCAGCACTCCCGCACAGGCCAGCACTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 90 bp | GTTGGCCTTTGTGGGAGTGCTGGCCTGTGCGGGAGTGCTGGCAATTaGAGCAGTGCTGACCTTTGTGGTATTGCCAGCCATTGTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: VGLCGSAGLCGSAGN*SSADLCGIASHCGS Trigger: GCTGCCACAATGGCTGGCAATACCACAAAGGTCAGCACTGCTGCAATTGCCAGCACTCCCGCACAGGCCAGCACTCCCACAAAGGCCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR CAA 90 bp | AGGCCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTCAGCAGTGCTGGCCTTaGCGCTGCTCCCTTCGTCCC | + |
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Preference number: 5 (lower is better) Translates to: RPLGFNQPGILGQEKRGSQQCWP*RCSLRP Trigger: GGGACGAAGGGAGCAGCGCAAAGGCCAGCACTGCTG...ACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 90 bp | CAGCACAGTTTTCCTATGGGACATTTGCTCGTTGCAGGTTCCGTCTaGTTCTCCCCGTCTCTGCACATCTTCCTGCAGTTGCCCAATGTG | + |
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Preference number: 5 (lower is better) Translates to: QHSFPMGHLLVAGSV*FSPSLHIFLQLPNV Trigger: CACATTGGGCAACTGCAGGAAGATGTGCAGAGACGGGGAGAAGCAGACGGAACCTGCAACGAGCAAATGTCCCATAGGAAAACTGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR CAA 90 bp | AGGCCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTCGGGAGCGCTGGTCTTaGTGGGAGTGCCAGCCATTG | + |
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Preference number: 5 (lower is better) Translates to: RPLGFNQPGILGQEKRGSRERWS*WECQPL Trigger: CAATGGCTGGCACTCCCACAAAGACCAGCGCTCCCG...ACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 90 bp | TCGTTGCAGGTTCCGTCTGCTTCTCCCCGTCTCTGCACATCTTCCTaGAGTTGCCCAATGTGTTTGCACACTTTTTCACATACCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: SLQVPSASPRLCTSS*SCPMCLHTFSHTSH Trigger: GTGGCTGGTATGTGAAAAAGTGTGCAAACACATTGGGCAACTGCAGGAAGATGTGCAGAGACGGGGAGAAGCAGACGGAACCTGCAACGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 90 bp | TGGGACATTTGCTCGTTGCAGGTTCCGTCTGCTTCTCCCCGTCTCTaGACATCTTCCTGCAGTTGCCCAATGTGTTTGCACACTTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: WDICSLQVPSASPRL*TSSCSCPMCLHTFS Trigger: TGAAAAAGTGTGCAAACACATTGGGCAACTGCAGGAAGATGTGCAGAGACGGGGAGAAGCAGACGGAACCTGCAACGAGCAAATGTCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR CAA 90 bp | CCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTAGTTGGGAGTGCCAGCCATaGCAGCAGCACCAACCATTG | + |
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Preference number: 5 (lower is better) Translates to: PLGFNQPGILGQEKRGSSWECQP*QQHQPL Trigger: CAATGGTTGGTGCTGCTGCAATGGCTGGCACTCCCA...ACTACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR CAA 90 bp | AGGCCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTCTGACCTTTGTGGTATaGCCAGCCATTGTGGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: RPLGFNQPGILGQEKRGSLTFVV*PAIVAA Trigger: CGCTGCCACAATGGCTGGCAATACCACAAAGGTCAG...ACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR CAA 90 bp | CCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTAGTCACATCTTCCTGCAGTaGCCCAATGTGTTTGCACAC | + |
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Preference number: 5 (lower is better) Translates to: PLGFNQPGILGQEKRGSSHIFLQ*PNVFAH Trigger: GTGTGCAAACACATTGGGCAACTGCAGGAAGATGTG...ACTACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS CCA 90 bp | AATGTGTTTGCACACTTTTTCACATACCAGCCACCTGTGACCAAATaGGCCAGGAACATAATGATCACAAGAGTAGACAGTAGGGACTTC | + |
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Preference number: 5 (lower is better) Translates to: NVFAHFFTYQPPVTK*ARNIMITRVDSRDF Trigger: GAAGTCCCTACTGTCTACTCTTGTGATCATTATGTTCCTGGCCCATTTGGTCACAGGTGGCTGGTATGTGAAAAAGTGTGCAAACACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS-3UTR CAA 90 bp | CCTCTTGGCTTTAATCAACCAGGGATATTAGGTCAGGAGAAAAGAGGCAGTAGTAGTTGCCCAATGTGTTaGCACACTTTTTCACATACC | + |
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Preference number: 5 (lower is better) Translates to: PLGFNQPGILGQEKRGSSSCPMC*HTFSHT Trigger: GGTATGTGAAAAAGTGTGCAAACACATTGGGCAACT...ACTACTGCCTCTTTTCTCCTGACCTAATATCCCTGGTTGATTAAAGCCAAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS CAA 90 bp | CGCTGGTCTTTGTGGGAGTGCCAGCCATTGCAGCAGCACCAACCATaGCAGCAGTGCTGGCCTTTGCGCTGCTCCCTTCGTCCCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: RWSLWECQPLQQHQP*QQCWPLRCSLRPHL Trigger: CAGGTGGGGACGAAGGGAGCAGCGCAAAGGCCAGCACTGCTGCAATGGTTGGTGCTGCTGCAATGGCTGGCACTCCCACAAAGACCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS CAA 90 bp | CGCTGGTCTTTGCGGGAGCGCTGGTCTTTGTGGGAGTGCCAGCCATaGCAGCAGCACCAACCATTGCAGCAGTGCTGGCCTTTGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RWSLRERWSLWECQP*QQHQPLQQCWPLRC Trigger: GCAGCGCAAAGGCCAGCACTGCTGCAATGGTTGGTGCTGCTGCAATGGCTGGCACTCCCACAAAGACCAGCGCTCCCGCAAAGACCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS CCA 72 bp | TGGTCTTTGCGGGAGCGCTGGTCTTTGCGGGAGCGCTaGTCTTTGTGGGAGTGCCAGCCATTGCAGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: WSLRERWSLRER*SLWECQPLQQH Trigger: GTGCTGCTGCAATGGCTGGCACTCCCACAAAGACCAGCGCTCCCGCAAAGACCAGCGCTCCCGCAAAGACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS CAA 72 bp | TTGCGGGAGCGCTGGTCTTTGCGGGAGCGCTGGTCTTaGTGGGAGTGCCAGCCATTGCAGCAGCACCAACCA | + |
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Preference number: 6 (lower is better) Translates to: LRERWSLRERWS*WECQPLQQHQP Trigger: TGGTTGGTGCTGCTGCAATGGCTGGCACTCCCACAAAGACCAGCGCTCCCGCAAAGACCAGCGCTCCCGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS CAA 90 bp | TGCTGGTCTTTGCGGGAGCGCTGGTCTTTGCGGGAGCGCTGGTCTTaGTGGGAGTGCCAGCCATTGCAGCAGCACCAACCATTGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: CWSLRERWSLRERWS*WECQPLQQHQPLQQ Trigger: CTGCTGCAATGGTTGGTGCTGCTGCAATGGCTGGCACTCCCACAAAGACCAGCGCTCCCGCAAAGACCAGCGCTCCCGCAAAGACCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 72 bp | CGCTGGTCTTTGCGGGAGCGCTGGTCTTTGTGGGAGTaGCAGCCATTGCAGCAGCACCAACCATTGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RWSLRERWSLWE*QPLQQHQPLQQ Trigger: CTGCTGCAATGGTTGGTGCTGCTGCAATGGCTGGCACTCCCACAAAGACCAGCGCTCCCGCAAAGACCAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 72 bp | TGCGGCATTGCTGGCCTTTGTGGTAGTGCTGGTCTTTaGGGGAGCGCTGGTCTTTGCGGGAGCGCTGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: CGIAGLCGSAGL*GSAGLCGSAGL Trigger: AAGACCAGCGCTCCCGCAAAGACCAGCGCTCCCGCAAAGACCAGCACTACCACAAAGGCCAGCAATGCCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS CAA 72 bp | TTGCCAGCCATTGTGGCAGCGCTGGCCTTTGCGGCATaGCTGGCCTTTGTGGTAGTGCTGGCCTTTGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: LPAIVAALAFAA*LAFVVVLAFAA Trigger: TGCCGCAAAGGCCAGCACTACCACAAAGGCCAGCAATGCCGCAAAGGCCAGCGCTGCCACAATGGCTGGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS TCA 72 bp | TGGCCTGTGCGGGAGTGCTGGCAATTGCAGCAGTGCTaGCCTTTGTGGTATTGCCAGCCATTGTGGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: WPVRECWQLQQC*PLWYCQPLWQR Trigger: GCGCTGCCACAATGGCTGGCAATACCACAAAGGTCAGCACTGCTGCAATTGCCAGCACTCCCGCACAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS CAA 72 bp | TTGTGGGAGTGCCAGCCATTGCAGCAGCACCAACCATaGCAGCAGTGCTGGCCTTTGCGCTGCTCCCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: LWECQPLQQHQP*QQCWPLRCSLR Trigger: ACGAAGGGAGCAGCGCAAAGGCCAGCACTGCTGCAATGGTTGGTGCTGCTGCAATGGCTGGCACTCCCACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS TCA 72 bp | TGGCCTTTGCGCTGCTCCCTTCGTCCCCACCTGCTGTaGCAAGATTATCTGAATTCTGTCCACCGCCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: WPLRCSLRPHLL*QDYLNSVHRPH Trigger: GTGGGGGCGGTGGACAGAATTCAGATAATCTTGTCACAGCAGGTGGGGACGAAGGGAGCAGCGCAAAGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 72 bp | TGTGGGAGTGCTGGCCTGTGCGGGAGTGCTGGCAATTaGAGCAGTGCTGACCTTTGTGGTATTGCCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: CGSAGLCGSAGN*SSADLCGIASH Trigger: ATGGCTGGCAATACCACAAAGGTCAGCACTGCTGCAATTGCCAGCACTCCCGCACAGGCCAGCACTCCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 72 bp | TCAGGTAGAGTTGGCCTTTGTGGGAGTGCTGGCCTGTaGGGGAGTGCTGGCAATTGCAGCAGTGCTGACCTT | + |
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Preference number: 6 (lower is better) Translates to: SGRVGLCGSAGL*GSAGNCSSADL Trigger: AAGGTCAGCACTGCTGCAATTGCCAGCACTCCCGCACAGGCCAGCACTCCCACAAAGGCCAACTCTACCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 72 bp | TGCTCGTTGCAGGTTCCGTCTGCTTCTCCCCGTCTCTaGACATCTTCCTGCAGTTGCCCAATGTGTTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: CSLQVPSASPRL*TSSCSCPMCLH Trigger: GTGCAAACACATTGGGCAACTGCAGGAAGATGTGCAGAGACGGGGAGAAGCAGACGGAACCTGCAACGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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| CDS GCA 72 bp | TTTCCTATGGGACATTTGCTCGTTGCAGGTTCCGTCTaGTTCTCCCCGTCTCTGCACATCTTCCTGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: FPMGHLLVAGSV*FSPSLHIFLQL Trigger: CAACTGCAGGAAGATGTGCAGAGACGGGGAGAAGCAGACGGAACCTGCAACGAGCAAATGTCCCATAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028966.3 |
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