Pregenerated sensors for DEFA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074439Ensembl transcript IDs: ENSMUST00000098892.5
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 72 bp | AAGGAGATAGACACAGCCTGGTCCTCTTCCCCTGGCTaGTCCTCAGTATTAGTCTCTTCATCTGTTTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KEIDTAWSSSPG*SSVLVSSSVLW Trigger: CCACAAAACAGATGAAGAGACTAATACTGAGGAGCAGCCAGGGGAAGAGGACCAGGCTGTGTCTATCTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098892.5 |
||
| CDS GCA 72 bp | GATTTCTGCAGGTCCCAAAAACGCGTTCTCTTCTTTTaGAGCCTCTTATTCTACAATAGCATATCAGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: DFCRSQKRVLFF*SLLFYNSISAF Trigger: AAAAGCTGATATGCTATTGTAGAATAAGAGGCTGCAAAAGAAGAGAACGCGTTTTTGGGACCTGCAGAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098892.5 |
||