Pregenerated sensors for DEFA31 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074442

Ensembl transcript IDs: ENSMUST00000098896.5

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GTTTTAGTCTCTTCATCTGTGTTTTGGATAGGATCAGCCTGGACCTaGAAGGCCAGCAGGATGAGGGCAGAGAGGAGGACTAGTGTCTTC	+
Preference number: 5 (lower is better) Translates to: VLVSSSVFWIGSAWT*KASRMRAERRTSVF Trigger: GAAGACACTAGTCCTCCTCTCTGCCCTCATCCTGCTGGCCTTCCAGGTCCAGGCTGATCCTATCCAAAACACAGATGAAGAGACTAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098896.5
CDS GCA 90 bp	AGCAGAGCGTGTATATTAAATGACCCTTTCTGCAGGTCCCATTCATaGGTTCTCTTCTTTTGCAGCCTCTTGTTCTACAATAGCATACCA	+
Preference number: 5 (lower is better) Translates to: SRACILNDPFCRSHS*VLFFCSLLFYNSIP Trigger: TGGTATGCTATTGTAGAACAAGAGGCTGCAAAAGAAGAGAACGCATGAATGGGACCTGCAGAAAGGGTCATTTAATATACACGCTCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098896.5
CDS CCA 72 bp	TCTTCATCTGTGTTTTGGATAGGATCAGCCTGGACCTaGAAGGCCAGCAGGATGAGGGCAGAGAGGAGGACT	+
Preference number: 6 (lower is better) Translates to: SSSVFWIGSAWT*KASRMRAERRT Trigger: AGTCCTCCTCTCTGCCCTCATCCTGCTGGCCTTCCAGGTCCAGGCTGATCCTATCCAAAACACAGATGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098896.5
CDS CCA 72 bp	ATCTCTCAACGATTCCTCTTGAAGAGAAGAGCCTTCTaGGTCTCCAAAAGAGACAGACACAGCCTGGTCCTC	+
Preference number: 6 (lower is better) Translates to: ISQRFLLKRRAF*VSKRDRHSLVL Trigger: GAGGACCAGGCTGTGTCTGTCTCTTTTGGAGACCCAGAAGGCTCTTCTCTTCAAGAGGAATCGTTGAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098896.5

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