Pregenerated sensors for DEFA28 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074434

Ensembl transcript IDs: ENSMUST00000098887.4

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CCGATCTCTCAACGCGTCACATTCCTCTTGAAGAGAAGAGCCTTCTaGGTCTCCAAAGGAGACAGAAACAGCTTGGTCTTCTTTCCCTGG	+
Preference number: 5 (lower is better) Translates to: PISQRVTFLLKRRAF*VSKGDRNSLVFFPW Trigger: CCAGGGAAAGAAGACCAAGCTGTTTCTGTCTCCTTTGGAGACCCAGAAGGCTCTTCTCTTCAAGAGGAATGTGACGCGTTGAGAGATCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098887.4
CDS CAA 90 bp	TTCTTTCCCTGGCTGCTCATCAATTTTACTCTCTTCATCTCTGTTTaGGATAGGATCAGCCTGGACTTGGAAGGCCAGCAGGGCAAGGGC	+
Preference number: 6 (lower is better) Translates to: FFPWLLINFTLFISV*DRISLDLEGQQGKG Trigger: GCCCTTGCCCTGCTGGCCTTCCAAGTCCAGGCTGATCCTATCCAAAACAGAGATGAAGAGAGTAAAATTGATGAGCAGCCAGGGAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098887.4
CDS CCA 72 bp	CAACGCGTCACATTCCTCTTGAAGAGAAGAGCCTTCTaGGTCTCCAAAGGAGACAGAAACAGCTTGGTCTTC	+
Preference number: 6 (lower is better) Translates to: QRVTFLLKRRAF*VSKGDRNSLVF Trigger: GAAGACCAAGCTGTTTCTGTCTCCTTTGGAGACCCAGAAGGCTCTTCTCTTCAAGAGGAATGTGACGCGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098887.4
CDS CAA 72 bp	ATAGCATATCCGATCTCTCAACGCGTCACATTCCTCTaGAAGAGAAGAGCCTTCTGGGTCTCCAAAGGAGAC	+
Preference number: 6 (lower is better) Translates to: IAYPISQRVTFL*KRRAFWVSKGD Trigger: GTCTCCTTTGGAGACCCAGAAGGCTCTTCTCTTCAAGAGGAATGTGACGCGTTGAGAGATCGGATATGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098887.4
CDS CAA 72 bp	TGGCTGCTCATCAATTTTACTCTCTTCATCTCTGTTTaGGATAGGATCAGCCTGGACTTGGAAGGCCAGCAG	+
Preference number: 6 (lower is better) Translates to: WLLINFTLFISV*DRISLDLEGQQ Trigger: CTGCTGGCCTTCCAAGTCCAGGCTGATCCTATCCAAAACAGAGATGAAGAGAGTAAAATTGATGAGCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098887.4
CDS CAA 90 bp	TTGAAGAGAAGAGCCTTCTGGGTCTCCAAAGGAGACAGAAACAGCTaGGTCTTCTTTCCCTGGCTGCTCATCAATTTTACTCTCTTCATC	+
Preference number: 6 (lower is better) Translates to: LKRRAFWVSKGDRNS*VFFPWLLINFTLFI Trigger: GATGAAGAGAGTAAAATTGATGAGCAGCCAGGGAAAGAAGACCAAGCTGTTTCTGTCTCCTTTGGAGACCCAGAAGGCTCTTCTCTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098887.4

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