Pregenerated sensors for DEF8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001482Ensembl transcript IDs: ENSMUST00000001522.10, ENSMUST00000065534.10, ENSMUST00000093049.10, ENSMUST00000108830.2, ENSMUST00000108832.8
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCAACTCCTGCCTCCCAGGAAGAAAGACAGGAGCCACATTATTGTaGGATTCCCCTCGTCTCCACACATCTTCCATCGTAGGATTTATG | + |
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Preference number: 1 (lower is better) Translates to: TNSCLPGRKTGATLL*DSPRLHTSSIVGFM Trigger: CATAAATCCTACGATGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTCTTCCTGGGAGGCAGGAGTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR TCA 90 bp | TTACACAGGAGGCTCAAGAAGGGCCAAGGACTCAGGACAGACATGTaGTACAATGGCAGGAAACACACAGATTTGGGGGTATGGGAAATG | + |
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Preference number: 1 (lower is better) Translates to: LHRRLKKGQGLRTDM*YNGRKHTDLGVWEM Trigger: CATTTCCCATACCCCCAAATCTGTGTGTTTCCTGCCATTGTATCACATGTCTGTCCTGAGTCCTTGGCCCTTCTTGAGCCTCCTGTGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR CCA 90 bp | GACTCAGGACAGACATGTGATACAATGGCAGGAAACACACAGATTTaGGGGTATGGGAAATGGCATTTGGTTTTAAGACCCTCTTTAACG | + |
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Preference number: 1 (lower is better) Translates to: DSGQTCDTMAGNTQI*GYGKWHLVLRPSLT Trigger: CGTTAAAGAGGGTCTTAAAACCAAATGCCATTTCCCATACCCCCAAATCTGTGTGTTTCCTGCCATTGTATCACATGTCTGTCCTGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR CCA 90 bp | CACAAGCACCTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCAGAATGCACATCTGGTaGGCAAGGCCAGCAGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: HKHLRNESRWPLVTSFWPRMHIW*ARPAGT Trigger: GGTGCCTGCTGGCCTTGCCCACCAGATGTGCATTCT...GGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAGGTGCTTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAAAACTTAGACCTTCCTGTAGAGGGGTGGATACGGTaGCTGGCGTTCTCCAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: WRWKGVGPTHLQNLDLPVEGWIR*LAFSSV Trigger: AACACTGGAGAACGCCAGGCACCGTATCCACCCCTC...TACAGGAAGGTCTAAGTTTTGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAAAACTTAGACCTTCCTGTAAGAATGCACATCTGGTaGGCAAGGCCAGCAGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: WRWKGVGPTHLQNLDLPVRMHIW*ARPAGT Trigger: GGTGCCTGCTGGCCTTGCCCACCAGATGTGCATTCT...TACAGGAAGGTCTAAGTTTTGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAAAACTTAGACCTTCCTGTAGCGTCAGCAGGACAGTaGCCTCTGTGGAAAAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: WRWKGVGPTHLQNLDLPVASAGQ*PLWKSF Trigger: GAAGCTTTTCCACAGAGGTCACTGTCCTGCTGACGC...TACAGGAAGGTCTAAGTTTTGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAATCAACAGCCAGGTATACACACTCGAAGTCTCCACAAGCACCTGAGGAATGAGGGGTGGATACGGTaGCTGGCGTTCTCCAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: PNQQPGIHTRSLHKHLRNEGWIR*LAFSSV Trigger: AACACTGGAGAACGCCAGGCACCGTATCCACCCCTC...ATTCCTCAGGTGCTTGTGGAGACTTCGAGTGTGTATACCTGGCTGTTGATTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAAAACTTAGACCTTCCTGTATCAGGAGGCATCCTCTaGTCTTACTGGACTGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: WRWKGVGPTHLQNLDLPVSGGIL*SYWTGL Trigger: GAGGCCAGTCCAGTAAGACCAGAGGATGCCTCCTGA...TACAGGAAGGTCTAAGTTTTGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR CCA 90 bp | CATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGAACAGGGACCCAGCAGTGAGGAGGAGGTaGCAGTGTGTCCGTCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: HLVLRPSLTPKRKRNRDPAVRRR*QCVRPS Trigger: GGAAGGACGGACACACTGCCACCTCCTCCTCACTGC...TGGGTCCCTGTTCCGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAGACAGGAGCCACATTATTGTGAGATTCCCCTCGTCTCCACACATCTTCCAGAGGGGTGGATACGGTaGCTGGCGTTCTCCAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: ERQEPHYCEIPLVSTHLPEGWIR*LAFSSV Trigger: AACACTGGAGAACGCCAGGCACCGTATCCACCCCTC...TGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAAAACTTAGACCTTCCTGTAGTCTCCAGAGTAGAATaGACATCTGGTGGGCAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: WRWKGVGPTHLQNLDLPVVSRVE*TSGGQG Trigger: GCCTTGCCCACCAGATGTGCATTCTACTCTGGAGAC...TACAGGAAGGTCTAAGTTTTGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAGACAGGAGCCACATTATTGTGAGATTCCCCTCGTCTCCACACATCTTCCAGTGTGTGCATGGAGGTaGAAAGGTGTAGGCCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: ERQEPHYCEIPLVSTHLPVCAWR*KGVGPT Trigger: GGTGGGGCCTACACCTTTCCACCTCCATGCACACAC...TGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTGCCTCATTAAAGGTGAAGGAAATCCAGGTTGTGACATGCCCTGGCCTTTGGCGTCAGCAGGACAGTaGCCTCTGTGGAAAAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LCLIKGEGNPGCDMPWPLASAGQ*PLWKSF Trigger: GAAGCTTTTCCACAGAGGTCACTGTCCTGCTGACGC...CAAAGGCCAGGGCATGTCACAACCTGGATTTCCTTCACCTTTAATGAGGCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGACAGGAGCCACATTATTGTGAGATTCCCCTCGTCTCCACACATCTTCCAGCGTCAGCAGGACAGTaGCCTCTGTGGAAAAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ERQEPHYCEIPLVSTHLPASAGQ*PLWKSF Trigger: GAAGCTTTTCCACAGAGGTCACTGTCCTGCTGACGC...TGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGACAAGGAGCAAAGGGGCAGACACAACCAACTCCTGCCTCCCAGGAAGAAAAGAAGCAGGCGTATCTaGCAAGAGAAGTTCCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: TDKEQRGRHNQLLPPRKKRSRRI*QEKFHR Trigger: TCTGTGGAACTTCTCTTGGCAGATACGCCTGCTTCT...TTTCTTCCTGGGAGGCAGGAGTTGGTTGTGTCTGCCCCTTTGCTCCTTGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR TCA 90 bp | GTATGGGAAATGGCATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGCAAGCACCTGAGGAATaGGTCCCGGTGGCCACTAGT | + |
|
Preference number: 2 (lower is better) Translates to: VWEMAFGFKTLFNAKEEAQAPEE*VPVATS Trigger: ACTAGTGGCCACCGGGACTCATTCCTCAGGTGCTTG...CGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATGCCATTTCCCATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR TCA 90 bp | GTATGGGAAATGGCATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGCCTGATCTTTCACCCTaGGGCAGGTCAACTCCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: VWEMAFGFKTLFNAKEEAPDLSP*GRSTPP Trigger: AGGGGGAGTTGACCTGCCTCAGGGTGAAAGATCAGG...CGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATGCCATTTCCCATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAGACAGGAGCCACATTATTGTGAGATTCCCCTCGTCTCCACACATCTTCCAGTCTCCAGAGTAGAATaGACATCTGGTGGGCAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ERQEPHYCEIPLVSTHLPVSRVE*TSGGQG Trigger: GCCTTGCCCACCAGATGTGCATTCTACTCTGGAGAC...TGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR CCA 90 bp | GTATGGGAAATGGCATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGAGAATGCACATCTGGTaGGCAAGGCCAGCAGGCACC | + |
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Preference number: 2 (lower is better) Translates to: VWEMAFGFKTLFNAKEEARMHIW*ARPAGT Trigger: GGTGCCTGCTGGCCTTGCCCACCAGATGTGCATTCT...CGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATGCCATTTCCCATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAAAACTTAGACCTTCCTGTATTAACACCCAGCGACTaGTCATCTTCAAGCAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: WRWKGVGPTHLQNLDLPVLTPSD*SSSSSA Trigger: TGCACTGCTTGAAGATGACCAGTCGCTGGGTGTTAA...TACAGGAAGGTCTAAGTTTTGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR CAA 90 bp | TTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGAACAGGGACCCATaGTTGACCCACATCACACTCAAAGGACTCCTGATCTTTCACCCT | + |
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Preference number: 2 (lower is better) Translates to: LRPSLTPKRKRNRDP*LTHITLKGLLIFHP Trigger: AGGGTGAAAGATCAGGAGTCCTTTGAGTGTGATGTGGGTCAACAATGGGTCCCTGTTCCGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR CCA 90 bp | GTATGGGAAATGGCATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGTCAGGAGGCATCCTCTaGTCTTACTGGACTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VWEMAFGFKTLFNAKEEASGGIL*SYWTGL Trigger: GAGGCCAGTCCAGTAAGACCAGAGGATGCCTCCTGA...CGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATGCCATTTCCCATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTGCCTCATTAAAGGTGAAGGAAATCCAGGTTGTGACATGCCCTGGCCTTTGAGAAGCAGGCGTATCTaGCAAGAGAAGTTCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: LCLIKGEGNPGCDMPWPLRSRRI*QEKFHR Trigger: TCTGTGGAACTTCTCTTGGCAGATACGCCTGCTTCT...CAAAGGCCAGGGCATGTCACAACCTGGATTTCCTTCACCTTTAATGAGGCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR GCA 90 bp | CATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGAACAGGGACCCAGATTTATGGGGTGTGTaGATGGAGGTGGAAAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: HLVLRPSLTPKRKRNRDPDLWGV*MEVERC Trigger: ACACCTTTCCACCTCCATGCACACACCCCATAAATC...TGGGTCCCTGTTCCGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR CCA 90 bp | CATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGAACAGGGACCCAATCCTCTGGTCTTACTaGACTGGCCTCTCAAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: HLVLRPSLTPKRKRNRDPILWSY*TGLSSF Trigger: GAAACTTGAGAGGCCAGTCCAGTAAGACCAGAGGAT...TGGGTCCCTGTTCCGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR CCA 90 bp | CATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGAACAGGGACCCATTAACACCCAGCGACTaGTCATCTTCAAGCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: HLVLRPSLTPKRKRNRDPLTPSD*SSSSSA Trigger: TGCACTGCTTGAAGATGACCAGTCGCTGGGTGTTAA...TGGGTCCCTGTTCCGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR GCA 90 bp | GTATGGGAAATGGCATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGACACAACCAACTCCTaGCTCCCAGGAAGAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: VWEMAFGFKTLFNAKEEADTTNS*LPGRKT Trigger: TGTCTTTCTTCCTGGGAGGCAGGAGTTGGTTGTGTC...CGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATGCCATTTCCCATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR GCA 90 bp | GTATGGGAAATGGCATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGAGAAGCAGGCGTATCTaGCAAGAGAAGTTCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: VWEMAFGFKTLFNAKEEARSRRI*QEKFHR Trigger: TCTGTGGAACTTCTCTTGGCAGATACGCCTGCTTCT...CGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATGCCATTTCCCATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR CCA 90 bp | GTATGGGAAATGGCATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGATCCTCTGGTCTTACTaGACTGGCCTCTCAAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: VWEMAFGFKTLFNAKEEAILWSY*TGLSSF Trigger: GAAACTTGAGAGGCCAGTCCAGTAAGACCAGAGGAT...CGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATGCCATTTCCCATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAACCACATGGTGGCTGACAACCCATCTGTAATGAGATCTGATGCCCTCTTCCCTACCTCTATTCTGTaGTTGAAATCAAACACAAGA | + |
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Preference number: 2 (lower is better) Translates to: SNHMVADNPSVMRSDALFPTSIL*LKSNTR Trigger: TCTTGTGTTTGATTTCAAGCACAGAATAGAGGTAGG...GAAGAGGGCATCAGATCTCATTACAGATGGGTTGTCAGCCACCATGTGGTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| 3UTR-3UTR TCA 90 bp | AATAATAATAATAATAATAGGGCTGGAGAGGTGGCTCAGAGGTTAAGAGCACTGCCTCTATTCTGTGCTTaGAATCAAACACAAGATTTC | + |
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Preference number: 2 (lower is better) Translates to: NNNNNNRAGEVAQRLRALPLFCA*NQTQDF Trigger: GAAATCTTGTGTTTGATTTCAAGCACAGAATAGAGG...CAGTGCTCTTAACCTCTGAGCCACCTCTCCAGCCCTATTATTATTATTATTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| 3UTR TCA 72 bp | ATGCCACCGAGGCCAATGATAACTGACAGGCTCACCTaGCCTAGAACCTCCTCCCCGGACACAGTCCCACCT | + |
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Preference number: 3 (lower is better) Translates to: MPPRPMITDRLT*PRTSSPDTVPP Trigger: AGGTGGGACTGTGTCCGGGGAGGAGGTTCTAGGTCAGGTGAGCCTGTCAGTTATCATTGGCCTCGGTGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR CCA 72 bp | GTTCCTAGCTGCCCGGCTCAGAGCACCAGGATAAAGTaGACTAGGCTGTGGCAGAAGCAGGCGTATCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: VPSCPAQSTRIK*TRLWQKQAYLP Trigger: TGGCAGATACGCCTGCTTCTGCCACAGCCTAGTCCACTTTATCCTGGTGCTCTGAGCCGGGCAGCTAGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR CCA 72 bp | AGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTaGCCCGAGACGAAGAGGTCTGGAGGATATACTGGG | + |
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Preference number: 3 (lower is better) Translates to: RNESRWPLVTSF*PETKRSGGYTG Trigger: CCCAGTATATCCTCCAGACCTCTTCGTCTCGGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR CCA 72 bp | GACCTAGAACCTCCTCCCCGGACACAGTCCCACCTATaGAACTGGATGCTAAGCCTCTTTAGGGTGGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: DLEPPPRTQSHL*NWMLSLFRVGS Trigger: GGAACCCACCCTAAAGAGGCTTAGCATCCAGTTCCATAGGTGGGACTGTGTCCGGGGAGGAGGTTCTAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR CCA 72 bp | CCGGCTCAGAGCACCAGGATAAAGTGGACTAGGCTGTaGCAGAAGCAGGCGTATCTGCCAAGAGAAGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: PAQSTRIKWTRL*QKQAYLPREVP Trigger: TGGAACTTCTCTTGGCAGATACGCCTGCTTCTGCCACAGCCTAGTCCACTTTATCCTGGTGCTCTGAGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR TCA 72 bp | TATACACACTCGAAGTCTCCACAAGCACCTGAGGAATaGGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: YTHSKSPQAPEE*VPVATSHFLLA Trigger: GGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAGGTGCTTGTGGAGACTTCGAGTGTGTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR TCA 72 bp | GTCATCTTCAAGCAGTGCACTGCGTCAGCAGGACAGTaGCCTCTGTGGAAAAGCTTCATCCCCCGAATGCCA | + |
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Preference number: 3 (lower is better) Translates to: VIFKQCTASAGQ*PLWKSFIPRMP Trigger: TGGCATTCGGGGGATGAAGCTTTTCCACAGAGGTCACTGTCCTGCTGACGCAGTGCACTGCTTGAAGATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR TCA 72 bp | CCACATCACACTCAAAGGACTCCTGATCTTTCACCCTaGGGCAGGTCAACTCCCCCTCCCCAATGCTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: PHHTQRTPDLSP*GRSTPPPQCFP Trigger: TGGAAAGCATTGGGGAGGGGGAGTTGACCTGCCTCAGGGTGAAAGATCAGGAGTCCTTTGAGTGTGATGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| 3UTR GCA 72 bp | GGCTGGAGAGGTGGCTCAGAGGTTAAGAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GWRGGSEVKSTD*SSRGPEFNSQQ Trigger: TTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGCCACCTCTCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| 3UTR CCA 72 bp | CACATCTTCCATCGTAGGATTTATGGGGTGTGTGCATaGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: HIFHRRIYGVCA*RWKGVGPTHLQ Trigger: TTGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCATGCACACACCCCATAAATCCTACGATGGAAGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| 3UTR TCA 72 bp | TGCCTCCCAGGAAGAAAGACAGGAGCCACATTATTGTaGGATTCCCCTCGTCTCCACACATCTTCCATCGTA | + |
|
Preference number: 3 (lower is better) Translates to: CLPGRKTGATLL*DSPRLHTSSIV Trigger: TACGATGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTCTTCCTGGGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| 3UTR GCA 72 bp | GCCTCATTAAAGGTGAAGGAAATCCAGGTTGTGACATaGCCTGGCCTTTGCCCACTAGTTGTGTGTGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: ASLKVKEIQVVT*PGLCPLVVCVN Trigger: GTTGACACACACAACTAGTGGGCAAAGGCCAGGGCATGTCACAACCTGGATTTCCTTCACCTTTAATGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| 3UTR CCA 72 bp | AACTCAGTCAGGAGGCATCCTCTGGTCTTACTGGACTaGCCTCTCAAGTTTCTGACCAGTTGTAAGGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: NSVRRHPLVLLD*PLKFLTSCKGV Trigger: TACACCCTTACAACTGGTCAGAAACTTGAGAGGCCAGTCCAGTAAGACCAGAGGATGCCTCCTGACTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| 3UTR TCA 72 bp | CTCAGGAGACAAGGTGCTAAAAGGGTTGGGTGCCTCTaGGTAGAACCTAAATCTTCCTCAGCAGAGATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LRRQGAKRVGCL*VEPKSSSAEIK Trigger: TTTTATCTCTGCTGAGGAAGATTTAGGTTCTACTCAGAGGCACCCAACCCTTTTAGCACCTTGTCTCCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCGAGACGAAGATGGCCTGCCGCAGCTaGTGGACATCAGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRNESRWPLVTSFWPETKMACRS*WTSEAR Trigger: CCTGGCCTCTGATGTCCAGCAGCTGCGGCAGGCCAT...CTTCGTCTCGGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCGAGACGAAGAGCTTCAGCCGGAGGTaGATCAGCCGCACCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LRNESRWPLVTSFWPETKSFSRR*ISRTTA Trigger: CGCTGTGGTGCGGCTGATCCACCTCCGGCTGAAGCT...CTTCGTCTCGGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCCAGAGTAGAATGCACATCTGGTGGGCAAGGCCAGCAGGCACCAGCCGGACACCTCTCAGAGAGATaGGAGCACGGCACTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSRVECTSGGQGQQAPAGHLSER*EHGTPH Trigger: GTGCGGAGTGCCGTGCTCCCATCTCTCTGAGAGGTG...TCCGGCTGGTGCCTGCTGGCCTTGCCCACCAGATGTGCATTCTACTCTGGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR GCA 90 bp | CACAAGCACCTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCCTGAGGCGGCCCATGTaGACTTCCAAGAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HKHLRNESRWPLVTSFWPLRRPM*TSKRSW Trigger: CCAGGACCTCTTGGAAGTGCACATGGGCCGCCTCAG...GGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAGGTGCTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCGAGACGAAGCACCTCTCAGAGAGATaGGAGCACGGCACTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRNESRWPLVTSFWPETKHLSER*EHGTPH Trigger: GTGCGGAGTGCCGTGCTCCCATCTCTCTGAGAGGTG...CTTCGTCTCGGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCCAGAGTAGAATGCACATCTGGTGGGCAAGGCCAGCAGGCACCAGCCGGAGCTCACAGTCCAACTTaGTGTGCTTGGCGAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSRVECTSGGQGQQAPAGAHSPT*CAWRRA Trigger: CGCTCTTCGCCAAGCACATCAAGTTGGACTGTGAGC...TCCGGCTGGTGCCTGCTGGCCTTGCCCACCAGATGTGCATTCTACTCTGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCCAGAGTAGAATGCACATCTGGTGGGCAAGGCCAGCAGGCACCAGCCGGATCCAGTGGCAGTGGCTaGAGTAGTATTGGCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSRVECTSGGQGQQAPAGSSGSG*SSIGPC Trigger: ACACGGGCCAATACTACTGCAGCCACTGCCACTGGA...TCCGGCTGGTGCCTGCTGGCCTTGCCCACCAGATGTGCATTCTACTCTGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | GATTTATGGGGTGTGTGCATGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAGCCTGCCGCAGCTGCTaGACATCAGAGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLWGVCMEVERCRPHPPSACRSC*TSEARK Trigger: CTTCCTGGCCTCTGATGTCCAGCAGCTGCGGCAGGC...TGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCATGCACACACCCCATAAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGCACCTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCCACAGACGAACCCCTTaGCTTGGCACCGCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HKHLRNESRWPLVTSFWPHRRTP*LGTAHS Trigger: ACTGTGAGCGGTGCCAAGCCAAGGGGTTCGTCTGTG...GGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAGGTGCTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCGAGACGAAGGCTCACAGTCCAACTTaGTGTGCTTGGCGAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LRNESRWPLVTSFWPETKAHSPT*CAWRRA Trigger: CGCTCTTCGCCAAGCACATCAAGTTGGACTGTGAGC...CTTCGTCTCGGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR GCA 90 bp | CACAAGCACCTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCTCCAGTGGCAGTGGCTaGAGTAGTATTGGCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HKHLRNESRWPLVTSFWPSSGSG*SSIGPC Trigger: ACACGGGCCAATACTACTGCAGCCACTGCCACTGGA...GGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAGGTGCTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACAAGGAGCAAAGGGGCAGACACAACCAACTCCTGCCTCCCAGGAAGAAAGCCTGCCGCAGCTGCTaGACATCAGAGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TDKEQRGRHNQLLPPRKKACRSC*TSEARK Trigger: CTTCCTGGCCTCTGATGTCCAGCAGCTGCGGCAGGC...TTTCTTCCTGGGAGGCAGGAGTTGGTTGTGTCTGCCCCTTTGCTCCTTGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGCACCTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCGTTTGCATTCTTCGATaGCCTGCCGCAGCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HKHLRNESRWPLVTSFWPVCILR*PAAAAG Trigger: TCCAGCAGCTGCGGCAGGCCATCGAAGAATGCAAAC...GGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAGGTGCTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCGAGACGAAGTGGGTTCCTCCTCATTaGGGTCCTTCAGCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRNESRWPLVTSFWPETKWVPPH*GPSAPG Trigger: TCCAGGAGCTGAAGGACCCCAATGAGGAGGAACCCA...CTTCGTCTCGGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCGAGACGAAGACGGGACACCTTGCGTaGCTCAAAGTCCCAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRNESRWPLVTSFWPETKTGHLA*LKVPVV Trigger: CACAACTGGGACTTTGAGCCACGCAAGGTGTCCCGT...CTTCGTCTCGGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAAAACTTAGACCTTCCTGTAATGGCCTGCCGCAGCTaGTGGACATCAGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WRWKGVGPTHLQNLDLPVMACRS*WTSEAR Trigger: CCTGGCCTCTGATGTCCAGCAGCTGCGGCAGGCCAT...TACAGGAAGGTCTAAGTTTTGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACCACATGGTGGCTGACAACCCAGCCTGCCGCAGCTGCTaGACATCAGAGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPEVLSLIPSNHMVADNPACRSC*TSEARK Trigger: CTTCCTGGCCTCTGATGTCCAGCAGCTGCGGCAGGC...TGGGTTGTCAGCCACCATGTGGTTGCTGGGAATTAAACTCAGGACCTCTGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| CDS-3UTR CCA 90 bp | ATGGTGGCTGACAACCCATCTGTAATGAGATCTGATGCCCTCTTCTGGCCTGCAAGCTTCAGCCGGAGGTaGATCAGCCGCACCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: MVADNPSVMRSDALFWPASFSRR*ISRTTA Trigger: CGCTGTGGTGCGGCTGATCCACCTCCGGCTGAAGCT...TGCAGGCCAGAAGAGGGCATCAGATCTCATTACAGATGGGTTGTCAGCCACCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| CDS-3UTR TCA 90 bp | CACAAGCACCTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCCACATGGTTTGGAGATaGGGTTCAGGCACTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HKHLRNESRWPLVTSFWPHMVWR*GSGTCC Trigger: ACAGCAAGTGCCTGAACCTCATCTCCAAACCATGTG...GGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAGGTGCTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGATTCCCCTCGTCTCCACACATCTTCCATCGTAGGATTTATGGGGTGTGTAGCTTCAGCCGGAGGTaGATCAGCCGCACCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VRFPSSPHIFHRRIYGVCSFSRR*ISRTTA Trigger: CGCTGTGGTGCGGCTGATCCACCTCCGGCTGAAGCT...ACACACCCCATAAATCCTACGATGGAAGATGTGTGGAGACGAGGGGAATCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGCCTCATTAAAGGTGAAGGAAATCCAGGTTGTGACATGCCCTGGCCTTTGATGGCCTGCCGCAGCTaGTGGACATCAGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLIKGEGNPGCDMPWPLMACRS*WTSEAR Trigger: CCTGGCCTCTGATGTCCAGCAGCTGCGGCAGGCCAT...CAAAGGCCAGGGCATGTCACAACCTGGATTTCCTTCACCTTTAATGAGGCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR GCA 90 bp | CCCAATCAACAGCCAGGTATACACACTCGAAGTCTCCACAAGCACCTGAGGAATCTGAGGCGGCCCATGTaGACTTCCAAGAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PNQQPGIHTRSLHKHLRNLRRPM*TSKRSW Trigger: CCAGGACCTCTTGGAAGTGCACATGGGCCGCCTCAG...ATTCCTCAGGTGCTTGTGGAGACTTCGAGTGTGTATACCTGGCTGTTGATTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | CATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGAACAGGGACCCAGCCTGCCGCAGCTGCTaGACATCAGAGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLVLRPSLTPKRKRNRDPACRSC*TSEARK Trigger: CTTCCTGGCCTCTGATGTCCAGCAGCTGCGGCAGGC...TGGGTCCCTGTTCCGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | CATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGAACAGGGACCCAAGCTTCAGCCGGAGGTaGATCAGCCGCACCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HLVLRPSLTPKRKRNRDPSFSRR*ISRTTA Trigger: CGCTGTGGTGCGGCTGATCCACCTCCGGCTGAAGCT...TGGGTCCCTGTTCCGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACAAGGAGCAAAGGGGCAGACACAACCAACTCCTGCCTCCCAGGAAGAAATGGGTTCCTCCTCATTaGGGTCCTTCAGCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TDKEQRGRHNQLLPPRKKWVPPH*GPSAPG Trigger: TCCAGGAGCTGAAGGACCCCAATGAGGAGGAACCCA...TTTCTTCCTGGGAGGCAGGAGTTGGTTGTGTCTGCCCCTTTGCTCCTTGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAAGCACACGTGACTGACAGATTAAGGATGACGATGACAACTCTCAGGATGCACCTCTCAGAGAGATaGGAGCACGGCACTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GEAHVTDRLRMTMTTLRMHLSER*EHGTPH Trigger: GTGCGGAGTGCCGTGCTCCCATCTCTCTGAGAGGTG...CATCCTGAGAGTTGTCATCGTCATCCTTAATCTGTCAGTCACGTGTGCTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAAAACTTAGACCTTCCTGTACACAGACGAACCCCTTaGCTTGGCACCGCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: WRWKGVGPTHLQNLDLPVHRRTP*LGTAHS Trigger: ACTGTGAGCGGTGCCAAGCCAAGGGGTTCGTCTGTG...TACAGGAAGGTCTAAGTTTTGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACAAGGAGCAAAGGGGCAGACACAACCAACTCCTGCCTCCCAGGAAGAAATTGCACACAGACGTGTaGCTGTCGAACGGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDKEQRGRHNQLLPPRKKLHTDV*LSNGKS Trigger: GCTCTTCCCGTTCGACAGCCACACGTCTGTGTGCAA...TTTCTTCCTGGGAGGCAGGAGTTGGTTGTGTCTGCCCCTTTGCTCCTTGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGCCTCATTAAAGGTGAAGGAAATCCAGGTTGTGACATGCCCTGGCCTTTGCTGAGGCGGCCCATGTaGACTTCCAAGAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLIKGEGNPGCDMPWPLLRRPM*TSKRSW Trigger: CCAGGACCTCTTGGAAGTGCACATGGGCCGCCTCAG...CAAAGGCCAGGGCATGTCACAACCTGGATTTCCTTCACCTTTAATGAGGCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACCACATCACCTCTCAGAGAGATaGGAGCACGGCACTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSTDCSSRGPEFNSQQPHHLSER*EHGTPH Trigger: GTGCGGAGTGCCGTGCTCCCATCTCTCTGAGAGGTG...ATGTGGTTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| CDS-3UTR TCA 90 bp | ACAGACAAGGAGCAAAGGGGCAGACACAACCAACTCCTGCCTCCCAGGAAGAAACACATGGTTTGGAGATaGGGTTCAGGCACTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TDKEQRGRHNQLLPPRKKHMVWR*GSGTCC Trigger: ACAGCAAGTGCCTGAACCTCATCTCCAAACCATGTG...TTTCTTCCTGGGAGGCAGGAGTTGGTTGTGTCTGCCCCTTTGCTCCTTGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGATTCCCCTCGTCTCCACACATCTTCCATCGTAGGATTTATGGGGTGTGTGCTCACAGTCCAACTTaGTGTGCTTGGCGAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VRFPSSPHIFHRRIYGVCAHSPT*CAWRRA Trigger: CGCTCTTCGCCAAGCACATCAAGTTGGACTGTGAGC...ACACACCCCATAAATCCTACGATGGAAGATGTGTGGAGACGAGGGGAATCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR GCA 90 bp | GGGGAAGCACACGTGACTGACAGATTAAGGATGACGATGACAACTCTCAGGATGTCCAGTGGCAGTGGCTaGAGTAGTATTGGCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GEAHVTDRLRMTMTTLRMSSGSG*SSIGPC Trigger: ACACGGGCCAATACTACTGCAGCCACTGCCACTGGA...CATCCTGAGAGTTGTCATCGTCATCCTTAATCTGTCAGTCACGTGTGCTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR GCA 90 bp | CTGACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACCACATGGTGGCTCAAGGGAAGGCATTCTaGTTAGAAAGTGGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTALPEVLSLIPSNHMVAQGKAF*LESGEG Trigger: CCCCTCCCCACTTTCTAAGCAGAATGCCTTCCCTTG...AGCCACCATGTGGTTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| CDS-3UTR CCA 90 bp | GTATGGGAAATGGCATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGCCTGCCGCAGCTGCTaGACATCAGAGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VWEMAFGFKTLFNAKEEAACRSC*TSEARK Trigger: CTTCCTGGCCTCTGATGTCCAGCAGCTGCGGCAGGC...CGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATGCCATTTCCCATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGATTCCCCTCGTCTCCACACATCTTCCATCGTAGGATTTATGGGGTGTGTGTTTGCATTCTTCGATaGCCTGCCGCAGCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRFPSSPHIFHRRIYGVCVCILR*PAAAAG Trigger: TCCAGCAGCTGCGGCAGGCCATCGAAGAATGCAAAC...ACACACCCCATAAATCCTACGATGGAAGATGTGTGGAGACGAGGGGAATCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATCAACAGCCAGGTATACACACTCGAAGTCTCCACAAGCACCTGAGGAATGTTTGCATTCTTCGATaGCCTGCCGCAGCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PNQQPGIHTRSLHKHLRNVCILR*PAAAAG Trigger: TCCAGCAGCTGCGGCAGGCCATCGAAGAATGCAAAC...ATTCCTCAGGTGCTTGTGGAGACTTCGAGTGTGTATACCTGGCTGTTGATTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATCAACAGCCAGGTATACACACTCGAAGTCTCCACAAGCACCTGAGGAATTGGGTTCCTCCTCATTaGGGTCCTTCAGCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PNQQPGIHTRSLHKHLRNWVPPH*GPSAPG Trigger: TCCAGGAGCTGAAGGACCCCAATGAGGAGGAACCCA...ATTCCTCAGGTGCTTGTGGAGACTTCGAGTGTGTATACCTGGCTGTTGATTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGATTCCCCTCGTCTCCACACATCTTCCATCGTAGGATTTATGGGGTGTGTTGGGTTCCTCCTCATTaGGGTCCTTCAGCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRFPSSPHIFHRRIYGVCWVPPH*GPSAPG Trigger: TCCAGGAGCTGAAGGACCCCAATGAGGAGGAACCCA...ACACACCCCATAAATCCTACGATGGAAGATGTGTGGAGACGAGGGGAATCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGCCTCATTAAAGGTGAAGGAAATCCAGGTTGTGACATGCCCTGGCCTTTGCACAGACGAACCCCTTaGCTTGGCACCGCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCLIKGEGNPGCDMPWPLHRRTP*LGTAHS Trigger: ACTGTGAGCGGTGCCAAGCCAAGGGGTTCGTCTGTG...CAAAGGCCAGGGCATGTCACAACCTGGATTTCCTTCACCTTTAATGAGGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACCACAGACGAACCCCTTaGCTTGGCACCGCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLRALTALPEVLSLIPSNHRRTP*LGTAHS Trigger: ACTGTGAGCGGTGCCAAGCCAAGGGGTTCGTCTGTG...GTTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS-3UTR CCA 90 bp | GAAAGACAGGAGCCACATTATTGTGAGATTCCCCTCGTCTCCACACATCTTCCACACAGACGAACCCCTTaGCTTGGCACCGCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERQEPHYCEIPLVSTHLPHRRTP*LGTAHS Trigger: ACTGTGAGCGGTGCCAAGCCAAGGGGTTCGTCTGTG...TGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGATTCCCCTCGTCTCCACACATCTTCCATCGTAGGATTTATGGGGTGTGTTTGCACACAGACGTGTaGCTGTCGAACGGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRFPSSPHIFHRRIYGVCLHTDV*LSNGKS Trigger: GCTCTTCCCGTTCGACAGCCACACGTCTGTGTGCAA...ACACACCCCATAAATCCTACGATGGAAGATGTGTGGAGACGAGGGGAATCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACGGCCTCACCCACCTGTaGAAGACAGCCGAACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLRALTALPEVLSLIPSNGLTHL*KTAEQS Trigger: TGACTGTTCGGCTGTCTTCCACAGGTGGGTGAGGCC...GTTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| CDS-3UTR TCA 90 bp | GAAAGACAGGAGCCACATTATTGTGAGATTCCCCTCGTCTCCACACATCTTCCAGCTCACAGTCCAACTTaGTGTGCTTGGCGAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ERQEPHYCEIPLVSTHLPAHSPT*CAWRRA Trigger: CGCTCTTCGCCAAGCACATCAAGTTGGACTGTGAGC...TGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTTAATTGCTCACAGTCCAACTTaGTGTGCTTGGCGAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VAQRLRALTALPEVLSLIAHSPT*CAWRRA Trigger: CGCTCTTCGCCAAGCACATCAAGTTGGACTGTGAGC...AATTAAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACCACATTCCAGTGGCAGTGGCTaGAGTAGTATTGGCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSTDCSSRGPEFNSQQPHSSGSG*SSIGPC Trigger: ACACGGGCCAATACTACTGCAGCCACTGCCACTGGA...ATGTGGTTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| CDS-3UTR GCA 90 bp | CATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGAACAGGGACCCATCCAGTGGCAGTGGCTaGAGTAGTATTGGCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLVLRPSLTPKRKRNRDPSSGSG*SSIGPC Trigger: ACACGGGCCAATACTACTGCAGCCACTGCCACTGGA...TGGGTCCCTGTTCCGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGACAGGAGCCACATTATTGTGAGATTCCCCTCGTCTCCACACATCTTCCAGTTTGCATTCTTCGATaGCCTGCCGCAGCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERQEPHYCEIPLVSTHLPVCILR*PAAAAG Trigger: TCCAGCAGCTGCGGCAGGCCATCGAAGAATGCAAAC...TGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CCA 90 bp | GTGGCTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTTAATTGTTTGCATTCTTCGATaGCCTGCCGCAGCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VAQRLRALTALPEVLSLIVCILR*PAAAAG Trigger: TCCAGCAGCTGCGGCAGGCCATCGAAGAATGCAAAC...AATTAAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| CDS-3UTR CCA 90 bp | AGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACTGGGTTCCTCCTCATTaGGGTCCTTCAGCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLRALTALPEVLSLIPSNWVPPH*GPSAPG Trigger: TCCAGGAGCTGAAGGACCCCAATGAGGAGGAACCCA...GTTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| CDS-3UTR CCA 90 bp | GAAAGACAGGAGCCACATTATTGTGAGATTCCCCTCGTCTCCACACATCTTCCAACGGGACACCTTGCGTaGCTCAAAGTCCCAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERQEPHYCEIPLVSTHLPTGHLA*LKVPVV Trigger: CACAACTGGGACTTTGAGCCACGCAAGGTGTCCCGT...TGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACACGGGACACCTTGCGTaGCTCAAAGTCCCAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLRALTALPEVLSLIPSNTGHLA*LKVPVV Trigger: CACAACTGGGACTTTGAGCCACGCAAGGTGTCCCGT...GTTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS-3UTR CCA 90 bp | TTGTGCCTCATTAAAGGTGAAGGAAATCCAGGTTGTGACATGCCCTGGCCTTTGACGGGACACCTTGCGTaGCTCAAAGTCCCAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCLIKGEGNPGCDMPWPLTGHLA*LKVPVV Trigger: CACAACTGGGACTTTGAGCCACGCAAGGTGTCCCGT...CAAAGGCCAGGGCATGTCACAACCTGGATTTCCTTCACCTTTAATGAGGCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CCA 90 bp | CATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGAACAGGGACCCATTGCACACAGACGTGTaGCTGTCGAACGGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLVLRPSLTPKRKRNRDPLHTDV*LSNGKS Trigger: GCTCTTCCCGTTCGACAGCCACACGTCTGTGTGCAA...TGGGTCCCTGTTCCGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CCA 90 bp | CATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGAACAGGGACCCACCCACCTCTTGGAACTaGATCTTCCTTCCTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HLVLRPSLTPKRKRNRDPPTSWN*IFLPVP Trigger: GGGGACAGGAAGGAAGATCCAGTTCCAAGAGGTGGG...TGGGTCCCTGTTCCGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108832.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAAGCACACGTGACTGACAGATTAAGGATGACGATGACAACTCTCAGGATGCACATGGTTTGGAGATaGGGTTCAGGCACTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GEAHVTDRLRMTMTTLRMHMVWR*GSGTCC Trigger: ACAGCAAGTGCCTGAACCTCATCTCCAAACCATGTG...CATCCTGAGAGTTGTCATCGTCATCCTTAATCTGTCAGTCACGTGTGCTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CCA 90 bp | GTGGCTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTTAATTATTCTGCTTAGAAAGTaGGGAGGGGCCTCCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: VAQRLRALTALPEVLSLIILLRK*GGASTP Trigger: AGGTGTGGAGGCCCCTCCCCACTTTCTAAGCAGAAT...AATTAAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| 3UTR CAA 72 bp | TCTTTAACGCCAAAGAGGAAGCGGAACAGGGACCCATaGTTGACCCACATCACACTCAAAGGACTCCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SLTPKRKRNRDP*LTHITLKGLLI Trigger: GATCAGGAGTCCTTTGAGTGTGATGTGGGTCAACAATGGGTCCCTGTTCCGCTTCCTCTTTGGCGTTAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR TCA 90 bp | GAAAGACAGGAGCCACATTATTGTGAGATTCCCCTCGTCTCCACACATCTTCCACACATGGTTTGGAGATaGGGTTCAGGCACTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ERQEPHYCEIPLVSTHLPHMVWR*GSGTCC Trigger: ACAGCAAGTGCCTGAACCTCATCTCCAAACCATGTG...TGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CCA 90 bp | GTATGGGAAATGGCATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGTTGCACACAGACGTGTaGCTGTCGAACGGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VWEMAFGFKTLFNAKEEALHTDV*LSNGKS Trigger: GCTCTTCCCGTTCGACAGCCACACGTCTGTGTGCAA...CGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATGCCATTTCCCATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR GCA 90 bp | GTATGGGAAATGGCATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGGGTAACAACACCCTGTaGAGGTGTACCAGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VWEMAFGFKTLFNAKEEAGNNTL*RCTRSG Trigger: TCCAGACCTGGTACACCTGCACAGGGTGTTGTTACC...CGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATGCCATTTCCCATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR GCA 90 bp | AATAATAATAATAATAATAGGGCTGGAGAGGTGGCTCAGAGGTTAAGAGCACTGCTGAGGCGGCCCATGTaGACTTCCAAGAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NNNNNNRAGEVAQRLRALLRRPM*TSKRSW Trigger: CCAGGACCTCTTGGAAGTGCACATGGGCCGCCTCAG...CAGTGCTCTTAACCTCTGAGCCACCTCTCCAGCCCTATTATTATTATTATTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS-3UTR GCA 90 bp | CAAACACAAGATTTCATGTATATTAGACTACATTCCCCACCCCTTAATAGAACTATGGCCTGCCGCAGCTaGTGGACATCAGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTQDFMYIRLHSPPLNRTMACRS*WTSEAR Trigger: CCTGGCCTCTGATGTCCAGCAGCTGCGGCAGGCCAT...AGTTCTATTAAGGGGTGGGGAATGTAGTCTAATATACATGAAATCTTGTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS-3UTR CCA 90 bp | AATAATAATAATAATAATAGGGCTGGAGAGGTGGCTCAGAGGTTAAGAGCACTGTTGCACACAGACGTGTaGCTGTCGAACGGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NNNNNNRAGEVAQRLRALLHTDV*LSNGKS Trigger: GCTCTTCCCGTTCGACAGCCACACGTCTGTGTGCAA...CAGTGCTCTTAACCTCTGAGCCACCTCTCCAGCCCTATTATTATTATTATTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS-3UTR TCA 90 bp | CAAACACAAGATTTCATGTATATTAGACTACATTCCCCACCCCTTAATAGAACTCACATGGTTTGGAGATaGGGTTCAGGCACTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTQDFMYIRLHSPPLNRTHMVWR*GSGTCC Trigger: ACAGCAAGTGCCTGAACCTCATCTCCAAACCATGTG...AGTTCTATTAAGGGGTGGGGAATGTAGTCTAATATACATGAAATCTTGTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| CDS-3UTR TCA 90 bp | AATAATAATAATAATAATAGGGCTGGAGAGGTGGCTCAGAGGTTAAGAGCACTGTCCAGCAAAGGACTTTaGAAGAAAGACAGCGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NNNNNNRAGEVAQRLRALSSKGL*KKDSES Trigger: GCTTTCGCTGTCTTTCTTTCAAAGTCCTTTGCTGGA...CAGTGCTCTTAACCTCTGAGCCACCTCTCCAGCCCTATTATTATTATTATTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| CDS-3UTR CAA 90 bp | CACAAGCACCTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCGTGAGCCGGGCACACTaGGGGCACGTGGTCGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HKHLRNESRWPLVTSFWPVSRAH*GHVVEL Trigger: CAACTCGACCACGTGCCCCAAGTGTGCCCGGCTCAC...GGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAGGTGCTTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS GCA 90 bp | AGGTTCCACCAGACCAGCTGCAGCCGAGGACAAGGGAAGGCATTCTaGTTAGAAAGTGGGGAGGGGCCTCCACACCTAGCCGAGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RFHQTSCSRGQGKAF*LESGEGPPHLAESE Trigger: CTCACTCTCGGCTAGGTGTGGAGGCCCCTCCCCACTTTCTAAGCAGAATGCCTTCCCTTGTCCTCGGCTGCAGCTGGTCTGGTGGAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS-3UTR CAA 90 bp | CTGAGGAATGAGTCCCGGTGGCCACTAGTCACTTCCTTCTGGCCCGAGACGAAGTCACAGACGAACCCCTaGGCTTGGCACCGCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LRNESRWPLVTSFWPETKSQTNP*AWHRSQ Trigger: CTGTGAGCGGTGCCAAGCCAAGGGGTTCGTCTGTGA...CTTCGTCTCGGGCCAGAAGGAAGTGACTAGTGGCCACCGGGACTCATTCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CAA 90 bp | GATTTATGGGGTGTGTGCATGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAGTGAGCCGGGCACACTaGGGGCACGTGGTCGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DLWGVCMEVERCRPHPPSVSRAH*GHVVEL Trigger: CAACTCGACCACGTGCCCCAAGTGTGCCCGGCTCAC...TGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCATGCACACACCCCATAAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCCAGAGTAGAATGCACATCTGGTGGGCAAGGCCAGCAGGCACCAGCCGGAACAGCCGAACAGTCATaGCACACAGACGTGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSRVECTSGGQGQQAPAGTAEQS*HTDVWL Trigger: CAGCCACACGTCTGTGTGCAATGACTGTTCGGCTGT...TCCGGCTGGTGCCTGCTGGCCTTGCCCACCAGATGTGCATTCTACTCTGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS TCA 90 bp | ATTCTGCTTAGAAAGTGGGGAGGGGCCTCCACACCTAGCCGAGAGTaGGCTACAGGCCTCACCCACCTGTGGAAGACAGCCGAACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILLRKWGGASTPSRE*ATGLTHLWKTAEQS Trigger: TGACTGTTCGGCTGTCTTCCACAGGTGGGTGAGGCCTGTAGCTCACTCTCGGCTAGGTGTGGAGGCCCCTCCCCACTTTCTAAGCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
||
| CDS-3UTR CAA 90 bp | GTCTCCAGAGTAGAATGCACATCTGGTGGGCAAGGCCAGCAGGCACCAGCCGGAAGCACGTCCCCTTCTTaGCAGAGTTCACAGACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSRVECTSGGQGQQAPAGSTSPS*QSSQTN Trigger: GTTCGTCTGTGAACTCTGCAAAGAAGGGGACGTGCT...TCCGGCTGGTGCCTGCTGGCCTTGCCCACCAGATGTGCATTCTACTCTGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CAA 90 bp | GATTTATGGGGTGTGTGCATGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCATTGGGTTCCTCCTCATaGGGGTCCTTCAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DLWGVCMEVERCRPHPPSLGSSS*GSFSSW Trigger: CCAGGAGCTGAAGGACCCCAATGAGGAGGAACCCAA...TGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCATGCACACACCCCATAAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACAAGGAGCAAAGGGGCAGACACAACCAACTCCTGCCTCCCAGGAAGAAACTGCAACGGGACACCTaGCGTGGCTCAAAGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TDKEQRGRHNQLLPPRKKLQRDT*RGSKSQ Trigger: CTGGGACTTTGAGCCACGCAAGGTGTCCCGTTGCAG...TTTCTTCCTGGGAGGCAGGAGTTGGTTGTGTCTGCCCCTTTGCTCCTTGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
||
| CDS-3UTR CAA 90 bp | CCCAATCAACAGCCAGGTATACACACTCGAAGTCTCCACAAGCACCTGAGGAATGTGAGCCGGGCACACTaGGGGCACGTGGTCGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PNQQPGIHTRSLHKHLRNVSRAH*GHVVEL Trigger: CAACTCGACCACGTGCCCCAAGTGTGCCCGGCTCAC...ATTCCTCAGGTGCTTGTGGAGACTTCGAGTGTGTATACCTGGCTGTTGATTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | CTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACCACATGGTGGCTGACAACCCACTGCAACGGGACACCTaGCGTGGCTCAAAGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LPEVLSLIPSNHMVADNPLQRDT*RGSKSQ Trigger: CTGGGACTTTGAGCCACGCAAGGTGTCCCGTTGCAG...TGGGTTGTCAGCCACCATGTGGTTGCTGGGAATTAAACTCAGGACCTCTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS-3UTR CAA 90 bp | ATGGTGGCTGACAACCCATCTGTAATGAGATCTGATGCCCTCTTCTGGCCTGCATCACAGACGAACCCCTaGGCTTGGCACCGCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: MVADNPSVMRSDALFWPASQTNP*AWHRSQ Trigger: CTGTGAGCGGTGCCAAGCCAAGGGGTTCGTCTGTGA...TGCAGGCCAGAAGAGGGCATCAGATCTCATTACAGATGGGTTGTCAGCCACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS-3UTR CAA 90 bp | GATTTATGGGGTGTGTGCATGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAACAGCCGAACAGTCATaGCACACAGACGTGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: DLWGVCMEVERCRPHPPSTAEQS*HTDVWL Trigger: CAGCCACACGTCTGTGTGCAATGACTGTTCGGCTGT...TGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCATGCACACACCCCATAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | TTGTGCCTCATTAAAGGTGAAGGAAATCCAGGTTGTGACATGCCCTGGCCTTTGGTGAGCCGGGCACACTaGGGGCACGTGGTCGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: LCLIKGEGNPGCDMPWPLVSRAH*GHVVEL Trigger: CAACTCGACCACGTGCCCCAAGTGTGCCCGGCTCAC...CAAAGGCCAGGGCATGTCACAACCTGGATTTCCTTCACCTTTAATGAGGCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | ATGGTGGCTGACAACCCATCTGTAATGAGATCTGATGCCCTCTTCTGGCCTGCATTGGGTTCCTCCTCATaGGGGTCCTTCAGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: MVADNPSVMRSDALFWPALGSSS*GSFSSW Trigger: CCAGGAGCTGAAGGACCCCAATGAGGAGGAACCCAA...TGCAGGCCAGAAGAGGGCATCAGATCTCATTACAGATGGGTTGTCAGCCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS-3UTR CAA 90 bp | GGGGAAGCACACGTGACTGACAGATTAAGGATGACGATGACAACTCTCAGGATGCTGCAACGGGACACCTaGCGTGGCTCAAAGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GEAHVTDRLRMTMTTLRMLQRDT*RGSKSQ Trigger: CTGGGACTTTGAGCCACGCAAGGTGTCCCGTTGCAG...CATCCTGAGAGTTGTCATCGTCATCCTTAATCTGTCAGTCACGTGTGCTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | GGGGAAGCACACGTGACTGACAGATTAAGGATGACGATGACAACTCTCAGGATGTCACAGACGAACCCCTaGGCTTGGCACCGCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: GEAHVTDRLRMTMTTLRMSQTNP*AWHRSQ Trigger: CTGTGAGCGGTGCCAAGCCAAGGGGTTCGTCTGTGA...CATCCTGAGAGTTGTCATCGTCATCCTTAATCTGTCAGTCACGTGTGCTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | GATTTATGGGGTGTGTGCATGGAGGTGGAAAGGTGTAGGCCCCACCCACCTTCAAGCACGTCCCCTTCTTaGCAGAGTTCACAGACGAAC | + |
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Preference number: 5 (lower is better) Translates to: DLWGVCMEVERCRPHPPSSTSPS*QSSQTN Trigger: GTTCGTCTGTGAACTCTGCAAAGAAGGGGACGTGCT...TGAAGGTGGGTGGGGCCTACACCTTTCCACCTCCATGCACACACCCCATAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | GTGAGATTCCCCTCGTCTCCACACATCTTCCATCGTAGGATTTATGGGGTGTGTTTGGGTTCCTCCTCATaGGGGTCCTTCAGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: VRFPSSPHIFHRRIYGVCLGSSS*GSFSSW Trigger: CCAGGAGCTGAAGGACCCCAATGAGGAGGAACCCAA...ACACACCCCATAAATCCTACGATGGAAGATGTGTGGAGACGAGGGGAATCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | GGGGAAGCACACGTGACTGACAGATTAAGGATGACGATGACAACTCTCAGGATGTTGGGTTCCTCCTCATaGGGGTCCTTCAGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: GEAHVTDRLRMTMTTLRMLGSSS*GSFSSW Trigger: CCAGGAGCTGAAGGACCCCAATGAGGAGGAACCCAA...CATCCTGAGAGTTGTCATCGTCATCCTTAATCTGTCAGTCACGTGTGCTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | GTGAGATTCCCCTCGTCTCCACACATCTTCCATCGTAGGATTTATGGGGTGTGTAGGAGAACCCGGATGTaGGGTTCCTCCTCATTGGGG | + |
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Preference number: 5 (lower is better) Translates to: VRFPSSPHIFHRRIYGVCRRTRM*GSSSLG Trigger: CCCCAATGAGGAGGAACCCAACATCCGGGTTCTCCT...ACACACCCCATAAATCCTACGATGGAAGATGTGTGGAGACGAGGGGAATCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | TTGTGCCTCATTAAAGGTGAAGGAAATCCAGGTTGTGACATGCCCTGGCCTTTGCTGCAACGGGACACCTaGCGTGGCTCAAAGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LCLIKGEGNPGCDMPWPLLQRDT*RGSKSQ Trigger: CTGGGACTTTGAGCCACGCAAGGTGTCCCGTTGCAG...CAAAGGCCAGGGCATGTCACAACCTGGATTTCCTTCACCTTTAATGAGGCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | GAAAGACAGGAGCCACATTATTGTGAGATTCCCCTCGTCTCCACACATCTTCCACTGCAACGGGACACCTaGCGTGGCTCAAAGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ERQEPHYCEIPLVSTHLPLQRDT*RGSKSQ Trigger: CTGGGACTTTGAGCCACGCAAGGTGTCCCGTTGCAG...TGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | TTGTGCCTCATTAAAGGTGAAGGAAATCCAGGTTGTGACATGCCCTGGCCTTTGTCACAGACGAACCCCTaGGCTTGGCACCGCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: LCLIKGEGNPGCDMPWPLSQTNP*AWHRSQ Trigger: CTGTGAGCGGTGCCAAGCCAAGGGGTTCGTCTGTGA...CAAAGGCCAGGGCATGTCACAACCTGGATTTCCTTCACCTTTAATGAGGCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | CTGACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACCACATGGTGGCTAGCACGTCCCCTTCTTaGCAGAGTTCACAGACGAAC | + |
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Preference number: 5 (lower is better) Translates to: LTALPEVLSLIPSNHMVASTSPS*QSSQTN Trigger: GTTCGTCTGTGAACTCTGCAAAGAAGGGGACGTGCT...AGCCACCATGTGGTTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS-3UTR CAA 90 bp | CCCAATCAACAGCCAGGTATACACACTCGAAGTCTCCACAAGCACCTGAGGAATAGCACGTCCCCTTCTTaGCAGAGTTCACAGACGAAC | + |
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Preference number: 5 (lower is better) Translates to: PNQQPGIHTRSLHKHLRNSTSPS*QSSQTN Trigger: GTTCGTCTGTGAACTCTGCAAAGAAGGGGACGTGCT...ATTCCTCAGGTGCTTGTGGAGACTTCGAGTGTGTATACCTGGCTGTTGATTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | GAAAGACAGGAGCCACATTATTGTGAGATTCCCCTCGTCTCCACACATCTTCCAACAGCCGAACAGTCATaGCACACAGACGTGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: ERQEPHYCEIPLVSTHLPTAEQS*HTDVWL Trigger: CAGCCACACGTCTGTGTGCAATGACTGTTCGGCTGT...TGGAAGATGTGTGGAGACGAGGGGAATCTCACAATAATGTGGCTCCTGTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | TTGTGCCTCATTAAAGGTGAAGGAAATCCAGGTTGTGACATGCCCTGGCCTTTGAGCACGTCCCCTTCTTaGCAGAGTTCACAGACGAAC | + |
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Preference number: 5 (lower is better) Translates to: LCLIKGEGNPGCDMPWPLSTSPS*QSSQTN Trigger: GTTCGTCTGTGAACTCTGCAAAGAAGGGGACGTGCT...CAAAGGCCAGGGCATGTCACAACCTGGATTTCCTTCACCTTTAATGAGGCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | GATGCCCTCTTCTGGCCTGCAGGCATACATATAGGCAGAAAGCTGTATGATATAACAGCCGAACAGTCATaGCACACAGACGTGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: DALFWPAGIHIGRKLYDITAEQS*HTDVWL Trigger: CAGCCACACGTCTGTGTGCAATGACTGTTCGGCTGT...TATATCATACAGCTTTCTGCCTATATGTATGCCTGCAGGCCAGAAGAGGGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS-3UTR CAA 90 bp | CCCAATCAACAGCCAGGTATACACACTCGAAGTCTCCACAAGCACCTGAGGAATATAGCATCCCACCTCTaGGAACTGGATCTTCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: PNQQPGIHTRSLHKHLRNIASHL*ELDLPS Trigger: GGAAGGAAGATCCAGTTCCAAGAGGTGGGATGCTAT...ATTCCTCAGGTGCTTGTGGAGACTTCGAGTGTGTATACCTGGCTGTTGATTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108832.8 |
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| CDS-3UTR CAA 90 bp | CTGACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACCACATGGTGGCTCTCCAGCAAAGGACTTaGAAAGAAAGACAGCGAAAG | + |
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Preference number: 5 (lower is better) Translates to: LTALPEVLSLIPSNHMVALQQRT*KERQRK Trigger: CTTTCGCTGTCTTTCTTTCAAAGTCCTTTGCTGGAG...AGCCACCATGTGGTTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS-3UTR CAA 90 bp | GTATGGGAAATGGCATTTGGTTTTAAGACCCTCTTTAACGCCAAAGAGGAAGCGTTCCTGTCCCCTTACTaGAGATGTTCCCCTTTCACC | + |
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Preference number: 5 (lower is better) Translates to: VWEMAFGFKTLFNAKEEAFLSPY*RCSPFT Trigger: GGTGAAAGGGGAACATCTCAAGTAAGGGGACAGGAA...CGCTTCCTCTTTGGCGTTAAAGAGGGTCTTAAAACCAAATGCCATTTCCCATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108832.8 |
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| CDS GCA 72 bp | TCTCAGGGCAGCAGTGCCAGGTTCCACCAGACCAGCTaGAGCCGAGGACAAGGGAAGGCATTCTGCTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: SQGSSARFHQTS*SRGQGKAFCLE Trigger: TTCTAAGCAGAATGCCTTCCCTTGTCCTCGGCTGCAGCTGGTCTGGTGGAACCTGGCACTGCTGCCCTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093049.10 |
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| CDS CCA 72 bp | TGGAAGACAGCCGAACAGTCATTGCACACAGACGTGTaGCTGTCGAACGGGAAGAGCACGTCCCCTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: WKTAEQSLHTDV*LSNGKSTSPSL Trigger: CAAAGAAGGGGACGTGCTCTTCCCGTTCGACAGCCACACGTCTGTGTGCAATGACTGTTCGGCTGTCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001522.10 ENSMUST00000065534.10 ENSMUST00000093049.10 ENSMUST00000108830.2 ENSMUST00000108832.8 |
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