Pregenerated sensors for DECR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028223Ensembl transcript IDs: ENSMUST00000029877.9
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGCTGGGGTGGGGTATGCATGTGTAGCAGGCACTTTGAAGAGTTaGTTCTACCCTACAGAGCAGGGCCTTGAGATTGAACTCAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: CAGVGYACVAGTLKS*FYPTEQGLEIELSS Trigger: TGAACTGAGTTCAATCTCAAGGCCCTGCTCTGTAGGGTAGAACCAACTCTTCAAAGTGCCTGCTACACATGCATACCCCACCCCAGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR GCA 90 bp | TACATTATGTACACACACACACACACACACACACACGTACACATGTaGTGGGGTGGGGTATGCATGTGTAGCAGGCACTTTGAAGAGTTG | + |
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Preference number: 1 (lower is better) Translates to: YIMYTHTHTHTHVHM*WGGVCMCSRHFEEL Trigger: CAACTCTTCAAAGTGCCTGCTACACATGCATACCCCACCCCAGCACATGTGTACGTGTGTGTGTGTGTGTGTGTGTGTGTACATAATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR GCA 90 bp | GAGGACAATGGTGGCGGTCAGTGTAGTGAACATGCTGTAAGAGGTTaGTCTGAAAGCCAAATGGACTTTCTAAAAGCACAGGCTCAATTC | + |
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Preference number: 1 (lower is better) Translates to: EDNGGGQCSEHAVRG*SESQMDFLKAQAQF Trigger: GAATTGAGCCTGTGCTTTTAGAAAGTCCATTTGGCTTTCAGAGCAACCTCTTACAGCATGTTCACTACACTGACCGCCACCATTGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGGTGGAGAATGGCTGCTGTGGGAAGGGCGTCATAGGCCTCAGCCCCCGTCCCTCAGAGATAGAAAATaGGCAGAGCAGACACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: TGGEWLLWEGRHRPQPPSLRDRK*AEQTLW Trigger: CCAGAGTGTCTGCTCTGCTCATTTTCTATCTCTGAG...GGACGGGGGCTGAGGCCTATGACGCCCTTCCCACAGCAGCCATTCTCCACCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGGTGGAGAATGGCTGCTGTGGGAAGGGCGTCATAGGCCTCAGCCCCCGTCCTTTTTAGGGCTGAGGTaGAACTCAGAGATAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: TGGEWLLWEGRHRPQPPSFLGLR*NSEIEN Trigger: ATTTTCTATCTCTGAGTTGCACCTCAGCCCTAAAAA...GGACGGGGGCTGAGGCCTATGACGCCCTTCCCACAGCAGCCATTCTCCACCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTGTTCCAAACCCAAACGATGGCACTGTGGTTGTGTTTACTGAACAACAATGGCCACCCCTGACCTaGCACACTGTTTGCACGTGG | + |
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Preference number: 2 (lower is better) Translates to: GLVPNPNDGTVVVFTEQQWPPLT*HTVCTW Trigger: CCACGTGCAAACAGTGTGCCAGGTCAGGGGTGGCCA...TTGTTGTTCAGTAAACACAACCACAGTGCCATCGTTTGGGTTTGGAACAAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR CAA 90 bp | ACGTACACATGTGCTGGGGTGGGGTATGCATGTGTAGCAGGCACTTaGAAGAGTTGGTTCTACCCTACAGAGCAGGGCCTTGAGATTGAA | + |
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Preference number: 2 (lower is better) Translates to: TYTCAGVGYACVAGT*KSWFYPTEQGLEIE Trigger: TTCAATCTCAAGGCCCTGCTCTGTAGGGTAGAACCAACTCTTCAAAGTGCCTGCTACACATGCATACCCCACCCCAGCACATGTGTACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCTTGTTCCAAACCCAAACGATGGCACTGTGGTTGTGTTTACTGAACAACAAACACACGTACACATGTaGTGGGGTGGGGTATGCATG | + |
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Preference number: 2 (lower is better) Translates to: GLVPNPNDGTVVVFTEQQTHVHM*WGGVCM Trigger: CATGCATACCCCACCCCAGCACATGTGTACGTGTGT...TTGTTGTTCAGTAAACACAACCACAGTGCCATCGTTTGGGTTTGGAACAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR TCA 90 bp | GCCTACTCCTGTTTCCATTTTCCACCTTTCCACACATATTTCAGTACTATCAAACAGAGTGGCCACCCCTaGCCTGGCACACTGTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: AYSCFHFPPFHTYFSTIKQSGHP*PGTLFA Trigger: TGCAAACAGTGTGCCAGGTCAGGGGTGGCCACTCTG...TTTGATAGTACTGAAATATGTGTGGAAAGGTGGAAAATGGAAACAGGAGTAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTAAGCTTCTTCTATTTCACCAGATCACAGAAGCCTACTCCTGTTTCCATCAGAGGCACTACAGGTaGAGAATGGCTGCTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TPKLLLFHQITEAYSCFHQRHYR*RMAAVG Trigger: TCCCACAGCAGCCATTCTCCACCTGTAGTGCCTCTG...ATGGAAACAGGAGTAGGCTTCTGTGATCTGGTGAAATAGAAGAAGCTTAGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTGTTCCAAACCCAAACGATGGCACTGTGGTTGTGTTTACTGAACAACAACAATGGAAGCAACCCTaGAAGTACAAGAAGACTGAT | + |
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Preference number: 2 (lower is better) Translates to: GLVPNPNDGTVVVFTEQQQWKQP*KYKKTD Trigger: ATCAGTCTTCTTGTACTTTCAGGGTTGCTTCCATTG...TTGTTGTTCAGTAAACACAACCACAGTGCCATCGTTTGGGTTTGGAACAAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTGTTCCAAACCCAAACGATGGCACTGTGGTTGTGTTTACTGAACAACAATGTAAGAGGTTGCTCTaGAAGCCAAATGGACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: GLVPNPNDGTVVVFTEQQCKRLL*KPNGLS Trigger: AGAAAGTCCATTTGGCTTTCAGAGCAACCTCTTACA...TTGTTGTTCAGTAAACACAACCACAGTGCCATCGTTTGGGTTTGGAACAAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTACTCCTGTTTCCATTTTCCACCTTTCCACACATATTTCAGTACTATCAAACACGTACACATGTGCTaGGGTGGGGTATGCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: AYSCFHFPPFHTYFSTIKHVHMC*GGVCMC Trigger: ACACATGCATACCCCACCCCAGCACATGTGTACGTG...TTTGATAGTACTGAAATATGTGTGGAAAGGTGGAAAATGGAAACAGGAGTAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR TCA 90 bp | CACAGAAGCCTACTCCTGTTTCCATTTTCCACCTTTCCACACATATTTCAGTACCAGACACTCTGGGTTTaGTCCTCAGAACTACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: HRSLLLFPFSTFPHIFQYQTLWV*SSELQK Trigger: TTTCTGTAGTTCTGAGGATCAAACCCAGAGTGTCTG...GTACTGAAATATGTGTGGAAAGGTGGAAAATGGAAACAGGAGTAGGCTTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR CCA 90 bp | CAATGTACAGTTACCATACAGGTCTTACACATAACAAACAGAAACTCTACATTCACTACAGGTGGAGAATaGCTGCTGTGGGAAGGGCGT | + |
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Preference number: 2 (lower is better) Translates to: QCTVTIQVLHITNRNSTFTTGGE*LLWEGR Trigger: ACGCCCTTCCCACAGCAGCCATTCTCCACCTGTAGT...GAATGTAGAGTTTCTGTTTGTTATGTGTAAGACCTGTATGGTAACTGTACATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR GCA 72 bp | ACACACCAACCAGAGGCACTACAGGTGGAGAATGGCTaGTGTGGGAAGGGCGTCATAGGCCTCAGCCCCCGT | + |
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Preference number: 3 (lower is better) Translates to: THQPEALQVENG*CGKGVIGLSPR Trigger: ACGGGGGCTGAGGCCTATGACGCCCTTCCCACAGCAGCCATTCTCCACCTGTAGTGCCTCTGGTTGGTGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTGGAGAATGGCTGCTGTGGGAAGGGCGTCATAGGCCTCAGCCCCCGTCCAGCAGGGCCTTGAGATaGAACTCAGTTCAACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: TGGEWLLWEGRHRPQPPSSRALR*NSVQLA Trigger: AGCCAGTTGAACTGAGTTCAATCTCAAGGCCCTGCT...GGACGGGGGCTGAGGCCTATGACGCCCTTCCCACAGCAGCCATTCTCCACCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR CCA 72 bp | TTCAACACACCAACCAGAGGCACTACAGGTGGAGAATaGCTGCTGTGGGAAGGGCGTCATAGGCCTCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: FNTPTRGTTGGE*LLWEGRHRPQP Trigger: GGGCTGAGGCCTATGACGCCCTTCCCACAGCAGCCATTCTCCACCTGTAGTGCCTCTGGTTGGTGTGTTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR CCA 72 bp | ACACACACACACACACACACACACGTACACATGTGCTaGGGTGGGGTATGCATGTGTAGCAGGCACTTTGAA | + |
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Preference number: 3 (lower is better) Translates to: THTHTHTHVHMC*GGVCMCSRHFE Trigger: TTCAAAGTGCCTGCTACACATGCATACCCCACCCCAGCACATGTGTACGTGTGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR CCA 72 bp | AATTTACCCTTCAATACAGAGTGGCCACCCCTGACCTaGCACACTGTTTGCACGTGGCAAACATCGACCATT | + |
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Preference number: 3 (lower is better) Translates to: NLPFNTEWPPLT*HTVCTWQTSTI Trigger: AATGGTCGATGTTTGCCACGTGCAAACAGTGTGCCAGGTCAGGGGTGGCCACTCTGTATTGAAGGGTAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR CCA 72 bp | GTGGGGTATGCATGTGTAGCAGGCACTTTGAAGAGTTaGTTCTACCCTACAGAGCAGGGCCTTGAGATTGAA | + |
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Preference number: 3 (lower is better) Translates to: VGYACVAGTLKS*FYPTEQGLEIE Trigger: TTCAATCTCAAGGCCCTGCTCTGTAGGGTAGAACCAACTCTTCAAAGTGCCTGCTACACATGCATACCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR CAA 90 bp | AAACAGAATATACTGAGACTCAATATAGCGCCTCTCATTTCTAGGCCCCATGCCGACCTGGCACACTGTTaGCACGTGGCAAACATCGAC | + |
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Preference number: 3 (lower is better) Translates to: KQNILRLNIAPLISRPHADLAHC*HVANID Trigger: GTCGATGTTTGCCACGTGCAAACAGTGTGCCAGGTC...GGCATGGGGCCTAGAAATGAGAGGCGCTATATTGAGTCTCAGTATATTCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR GCA 72 bp | GGTGGCGGTCAGTGTAGTGAACATGCTGTAAGAGGTTaGTCTGAAAGCCAAATGGACTTTCTAAAAGCACAG | + |
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Preference number: 3 (lower is better) Translates to: GGGQCSEHAVRG*SESQMDFLKAQ Trigger: CTGTGCTTTTAGAAAGTCCATTTGGCTTTCAGAGCAACCTCTTACAGCATGTTCACTACACTGACCGCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR CCA 72 bp | AAGGATGTGCGGGAAAAGCATCTTAGAACAGTCCAGTaGACAAGAGTGACTCTCAAAGGCCTTGTTCCAAAC | + |
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Preference number: 3 (lower is better) Translates to: KDVREKHLRTVQ*TRVTLKGLVPN Trigger: GTTTGGAACAAGGCCTTTGAGAGTCACTCTTGTCCACTGGACTGTTCTAAGATGCTTTTCCCGCACATCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR CAA 90 bp | CAATGTACAGTTACCATACAGGTCTTACACATAACAAACAGAAACTCTACATTCGCAGACACTCTGGGTTaGATCCTCAGAACTACAGAA | + |
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Preference number: 3 (lower is better) Translates to: QCTVTIQVLHITNRNSTFADTLG*ILRTTE Trigger: TTCTGTAGTTCTGAGGATCAAACCCAGAGTGTCTGC...GAATGTAGAGTTTCTGTTTGTTATGTGTAAGACCTGTATGGTAACTGTACATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR-3UTR CAA 90 bp | GCCTACTCCTGTTTCCATTTTCCACCTTTCCACACATATTTCAGTACTATCAAATATACATGGTCGAGGTaGTGTGTACATTATGTACAC | + |
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Preference number: 3 (lower is better) Translates to: AYSCFHFPPFHTYFSTIKYTWSR*CVHYVH Trigger: GTGTACATAATGTACACACAACCTCGACCATGTATA...TTTGATAGTACTGAAATATGTGTGGAAAGGTGGAAAATGGAAACAGGAGTAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR TCA 72 bp | TCCAAACCCAAACGATGGCACTGTGGTTGTGTTTACTaGACAACAAACATCATTTATGACACAATTAACTGT | + |
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Preference number: 3 (lower is better) Translates to: SKPKRWHCGCVY*TTNIIYDTINC Trigger: ACAGTTAATTGTGTCATAAATGATGTTTGTTGTTCAGTAAACACAACCACAGTGCCATCGTTTGGGTTTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| 3UTR CAA 72 bp | TGTGCTGGGGTGGGGTATGCATGTGTAGCAGGCACTTaGAAGAGTTGGTTCTACCCTACAGAGCAGGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: CAGVGYACVAGT*KSWFYPTEQGL Trigger: AAGGCCCTGCTCTGTAGGGTAGAACCAACTCTTCAAAGTGCCTGCTACACATGCATACCCCACCCCAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR TCA 90 bp | AGAGTTGGTTCTACCCTACAGAGCAGGGCCTTGAGATTGAACTCAGTTCAACTGAAGCTGAAAAACCTCTaGGGACCCGGATCGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RVGSTLQSRALRLNSVQLKLKNL*GPGSQG Trigger: CCCCTGCGATCCGGGTCCTCAGAGGTTTTTCAGCTT...CAGTTGAACTGAGTTCAATCTCAAGGCCCTGCTCTGTAGGGTAGAACCAACTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR GCA 90 bp | ACAGGTGGAGAATGGCTGCTGTGGGAAGGGCGTCATAGGCCTCAGCCCCCGTCCTGTGCTTTAATTAGCTaGTTTCCAATTTCTAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: TGGEWLLWEGRHRPQPPSCALIS*FPISSV Trigger: GACACTAGAAATTGGAAAGCAGCTAATTAAAGCACA...GGACGGGGGCTGAGGCCTATGACGCCCTTCCCACAGCAGCCATTCTCCACCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR GCA 90 bp | GGCCTTGTTCCAAACCCAAACGATGGCACTGTGGTTGTGTTTACTGAACAACAAAAGTTGTCATTGCCTTaGCAAGGCCAGTCCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GLVPNPNDGTVVVFTEQQKLSLP*QGQSLL Trigger: GAGGAGGGACTGGCCTTGGCAAGGCAATGACAACTT...TTGTTGTTCAGTAAACACAACCACAGTGCCATCGTTTGGGTTTGGAACAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR GCA 90 bp | GGCCTTGTTCCAAACCCAAACGATGGCACTGTGGTTGTGTTTACTGAACAACAACACATCCGGATGCCCTaGAACTTTGATCAGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GLVPNPNDGTVVVFTEQQHIRMP*NFDQFQ Trigger: CTGGAACTGATCAAAGTTGCAGGGCATCCGGATGTG...TTGTTGTTCAGTAAACACAACCACAGTGCCATCGTTTGGGTTTGGAACAAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR CCA 90 bp | GCAGACACTCTGGGTTTGATCCTCAGAACTACAGAAATCATCAAGCAAACAATTCTGGCTATCACACACTaGGCACCCAGGGTAGACAAG | + |
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Preference number: 4 (lower is better) Translates to: ADTLGLILRTTEIIKQTILAITH*APRVDK Trigger: CTTGTCTACCCTGGGTGCCCAGTGTGTGATAGCCAG...AATTGTTTGCTTGATGATTTCTGTAGTTCTGAGGATCAAACCCAGAGTGTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR TCA 90 bp | GGCCTTGTTCCAAACCCAAACGATGGCACTGTGGTTGTGTTTACTGAACAACAATTTTTGTTCCAAAGCTaGAAAACCTCTGAGGACCCG | + |
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Preference number: 4 (lower is better) Translates to: GLVPNPNDGTVVVFTEQQFLFQS*KTSEDP Trigger: CGGGTCCTCAGAGGTTTTTCAGCTTTGGAACAAAAA...TTGTTGTTCAGTAAACACAACCACAGTGCCATCGTTTGGGTTTGGAACAAGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR CCA 90 bp | GGCCTTGTTCCAAACCCAAACGATGGCACTGTGGTTGTGTTTACTGAACAACAACTTCCACGCCTGATTTaGCTGAAGAACTTGGCATTA | + |
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Preference number: 4 (lower is better) Translates to: GLVPNPNDGTVVVFTEQQLPRLI*LKNLAL Trigger: TAATGCCAAGTTCTTCAGCCAAATCAGGCGTGGAAG...TTGTTGTTCAGTAAACACAACCACAGTGCCATCGTTTGGGTTTGGAACAAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR TCA 90 bp | GCAGACACTCTGGGTTTGATCCTCAGAACTACAGAAATCATCAAGCAAACAATTGATGCCCTGCAACTTTaGTCAGTTCCAGCACTGTGT | + |
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Preference number: 4 (lower is better) Translates to: ADTLGLILRTTEIIKQTIDALQL*SVPALC Trigger: ACACAGTGCTGGAACTGATCAAAGTTGCAGGGCATC...AATTGTTTGCTTGATGATTTCTGTAGTTCTGAGGATCAAACCCAGAGTGTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR GCA 90 bp | TCAGTACTATCAAAGCTTTTTCAACACACCAACCAGAGGCACTACAGGTGGAGAGAAAGTGGCCAGATTTaGAAGTTCCTCCATAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SVLSKLFQHTNQRHYRWRESGQI*KFLHSS Trigger: GGAACTATGGAGGAACTTGCAAATCTGGCCACTTTC...TCTCCACCTGTAGTGCCTCTGGTTGGTGTGTTGAAAAAGCTTTGATAGTACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR GCA 90 bp | TCAGTACTATCAAAGCTTTTTCAACACACCAACCAGAGGCACTACAGGTGGAGAAAGAGGCATAATCACTaGATAGGAAAGTGGCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SVLSKLFQHTNQRHYRWRKRHNH*IGKWPD Trigger: ATCTGGCCACTTTCCTATGCAGTGATTATGCCTCTT...TCTCCACCTGTAGTGCCTCTGGTTGGTGTGTTGAAAAAGCTTTGATAGTACTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR GCA 90 bp | AAACAGAATATACTGAGACTCAATATAGCGCCTCTCATTTCTAGGCCCCATGCCAAACATCAATATTTCTaGTGGCTATCACACACTGGG | + |
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Preference number: 4 (lower is better) Translates to: KQNILRLNIAPLISRPHAKHQYF*WLSHTG Trigger: CCCAGTGTGTGATAGCCAGCAGAAATATTGATGTTT...GGCATGGGGCCTAGAAATGAGAGGCGCTATATTGAGTCTCAGTATATTCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR GCA 90 bp | GGCCTTGTTCCAAACCCAAACGATGGCACTGTGGTTGTGTTTACTGAACAACAAAGAAGAAATCTCTTCTaGAGTCGCTTTCAAAACATC | + |
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Preference number: 4 (lower is better) Translates to: GLVPNPNDGTVVVFTEQQRRNLF*SRFQNI Trigger: GATGTTTTGAAAGCGACTGCAGAAGAGATTTCTTCT...TTGTTGTTCAGTAAACACAACCACAGTGCCATCGTTTGGGTTTGGAACAAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR TCA 90 bp | GCCTACTCCTGTTTCCATTTTCCACCTTTCCACACATATTTCAGTACTATCAAAAAAGCCACTTTTCCTTaGAAAGCATCAGGTGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: AYSCFHFPPFHTYFSTIKKATFP*KASGGS Trigger: GCTACCACCTGATGCTTTTCAAGGAAAAGTGGCTTT...TTTGATAGTACTGAAATATGTGTGGAAAGGTGGAAAATGGAAACAGGAGTAGGC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR TCA 90 bp | ACAGAAGCCTACTCCTGTTTCCATTTTCCACCTTTCCACACATATTTCAGTACTTCACACCGAATCGCATaGACCTTGTTTCCAGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: TEAYSCFHFPPFHTYFSTSHRIA*TLFPVL Trigger: TAAAACTGGAAACAAGGTTCATGCGATTCGGTGTGA...AGTACTGAAATATGTGTGGAAAGGTGGAAAATGGAAACAGGAGTAGGCTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR GCA 90 bp | CAATGTACAGTTACCATACAGGTCTTACACATAACAAACAGAAACTCTACATTCATCACCACATCCGGATaGCCTGCAACTTTGATCAGT | + |
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Preference number: 4 (lower is better) Translates to: QCTVTIQVLHITNRNSTFITTSG*PATLIS Trigger: ACTGATCAAAGTTGCAGGGCATCCGGATGTGGTGAT...GAATGTAGAGTTTCTGTTTGTTATGTGTAAGACCTGTATGGTAACTGTACATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR TCA 90 bp | CAATGTACAGTTACCATACAGGTCTTACACATAACAAACAGAAACTCTACATTCCATAGGCTGTGCCATTaGGAACTATGTCAGTTATGG | + |
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Preference number: 4 (lower is better) Translates to: QCTVTIQVLHITNRNSTFHRLCH*ELCQLW Trigger: CCATAACTGACATAGTTCTCAATGGCACAGCCTATG...GAATGTAGAGTTTCTGTTTGTTATGTGTAAGACCTGTATGGTAACTGTACATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR CCA 90 bp | ACTCCTAAGCTTCTTCTATTTCACCAGATCACAGAAGCCTACTCCTGTTTCCATGAAGAATTTAGACTGTaGAGCATCTTTGCTTTGATA | + |
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Preference number: 4 (lower is better) Translates to: TPKLLLFHQITEAYSCFHEEFRL*SIFALI Trigger: TATCAAAGCAAAGATGCTCCACAGTCTAAATTCTTC...ATGGAAACAGGAGTAGGCTTCTGTGATCTGGTGAAATAGAAGAAGCTTAGGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR CCA 90 bp | CAATGTACAGTTACCATACAGGTCTTACACATAACAAACAGAAACTCTACATTCGAACTATGTCAGTTATaGTCTTCCAGCCATTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QCTVTIQVLHITNRNSTFELCQL*SSSHWE Trigger: CTCCCAATGGCTGGAAGACCATAACTGACATAGTTC...GAATGTAGAGTTTCTGTTTGTTATGTGTAAGACCTGTATGGTAACTGTACATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR TCA 90 bp | CAATGTACAGTTACCATACAGGTCTTACACATAACAAACAGAAACTCTACATTCGGAGCATCTTTGCTTTaGTACAGTGTTTTTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QCTVTIQVLHITNRNSTFGASLL*YSVFVP Trigger: TGGAACAAAAACACTGTATCAAAGCAAAGATGCTCC...GAATGTAGAGTTTCTGTTTGTTATGTGTAAGACCTGTATGGTAACTGTACATTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR CAA 90 bp | ACAGGTGGAGAATGGCTGCTGTGGGAAGGGCGTCATAGGCCTCAGCCCCCGTCCATATCCCACTCCTCCTaGGTGACCTTCTTTAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: TGGEWLLWEGRHRPQPPSISHSS*VTFFRE Trigger: CTCTCTAAAGAAGGTCACCAAGGAGGAGTGGGATAT...GGACGGGGGCTGAGGCCTATGACGCCCTTCCCACAGCAGCCATTCTCCACCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR CAA 90 bp | ACAGGTGGAGAATGGCTGCTGTGGGAAGGGCGTCATAGGCCTCAGCCCCCGTCCTGGAGCATCTTTGCTTaGATACAGTGTTTTTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: TGGEWLLWEGRHRPQPPSWSIFA*IQCFCS Trigger: GGAACAAAAACACTGTATCAAAGCAAAGATGCTCCA...GGACGGGGGCTGAGGCCTATGACGCCCTTCCCACAGCAGCCATTCTCCACCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS TCA 90 bp | TTATGGTCTTCCAGCCATTGGGAGTCAGTCTCTCACTGGGGGAAATaGAGTTCCCTGCCGCGTTGTTTATCACCACATCCGGATGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: LWSSSHWESVSHWGK*SSLPRCLSPHPDAL Trigger: CAGGGCATCCGGATGTGGTGATAAACAACGCGGCAGGGAACTTCATTTCCCCCAGTGAGAGACTGACTCCCAATGGCTGGAAGACCATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS GCA 90 bp | CCAGCCATTGGGAGTCAGTCTCTCACTGGGGGAAATGAAGTTCCCTaGCGCGTTGTTTATCACCACATCCGGATGCCCTGCAACTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: PAIGSQSLTGGNEVP*RVVYHHIRMPCNFD Trigger: ATCAAAGTTGCAGGGCATCCGGATGTGGTGATAAACAACGCGGCAGGGAACTTCATTTCCCCCAGTGAGAGACTGACTCCCAATGGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS GCA 90 bp | GGCTATCACACACTGGGCACCCAGGGTAGACAAGAAAGTTGTCATTaGCTTGCCAAGGCCAGTCCCTCCTCCAGTAATGAAAGCCACTTT | + |
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Preference number: 5 (lower is better) Translates to: GYHTLGTQGRQESCH*LAKASPSSSNESHF Trigger: AAAGTGGCTTTCATTACTGGAGGAGGGACTGGCCTTGGCAAGGCAATGACAACTTTCTTGTCTACCCTGGGTGCCCAGTGTGTGATAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS TCA 90 bp | TTGCCAAGGCCAGTCCCTCCTCCAGTAATGAAAGCCACTTTTCCTTaGAAAGCATCAGGTGGTAGCATAGGCTTTAAAACGGGCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LPRPVPPPVMKATFP*KASGGSIGFKTGWK Trigger: CTTCCAGCCCGTTTTAAAGCCTATGCTACCACCTGATGCTTTTCAAGGAAAAGTGGCTTTCATTACTGGAGGAGGGACTGGCCTTGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS TCA 90 bp | TCCCTGCCGCGTTGTTTATCACCACATCCGGATGCCCTGCAACTTTaGTCAGTTCCAGCACTGTGTTATGTACCATATCAGGATCTCGAA | + |
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Preference number: 5 (lower is better) Translates to: SLPRCLSPHPDALQL*SVPALCYVPYQDLE Trigger: TTCGAGATCCTGATATGGTACATAACACAGTGCTGGAACTGATCAAAGTTGCAGGGCATCCGGATGTGGTGATAAACAACGCGGCAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR CAA 90 bp | GGCCTTGTTCCAAACCCAAACGATGGCACTGTGGTTGTGTTTACTGAACAACAAAAAGTTGTCATTGCCTaGCCAAGGCCAGTCCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GLVPNPNDGTVVVFTEQQKVVIA*PRPVPP Trigger: AGGAGGGACTGGCCTTGGCAAGGCAATGACAACTTT...TTGTTGTTCAGTAAACACAACCACAGTGCCATCGTTTGGGTTTGGAACAAGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS GCA 90 bp | AATGAAGTTCCCTGCCGCGTTGTTTATCACCACATCCGGATGCCCTaGAACTTTGATCAGTTCCAGCACTGTGTTATGTACCATATCAGG | + |
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Preference number: 5 (lower is better) Translates to: NEVPCRVVYHHIRMP*NFDQFQHCVMYHIR Trigger: CCTGATATGGTACATAACACAGTGCTGGAACTGATCAAAGTTGCAGGGCATCCGGATGTGGTGATAAACAACGCGGCAGGGAACTTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS CCA 90 bp | GCAGTCGCTTTCAAAACATCAATATTTCTGCTGGCTATCACACACTaGGCACCCAGGGTAGACAAGAAAGTTGTCATTGCCTTGCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: AVAFKTSIFLLAITH*APRVDKKVVIALPR Trigger: CCTTGGCAAGGCAATGACAACTTTCTTGTCTACCCTGGGTGCCCAGTGTGTGATAGCCAGCAGAAATATTGATGTTTTGAAAGCGACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS CCA 90 bp | CCCATTCAGCTGCAAGTGACTTATTCATGGCTTCCACGCCTGATTTaGCTGAAGAACTTGGCATTACAAAGCCTGATCCACTCTCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: PIQLQVTYSWLPRLI*LKNLALQSLIHSQH Trigger: ATGCTGAGAGTGGATCAGGCTTTGTAATGCCAAGTTCTTCAGCCAAATCAGGCGTGGAAGCCATGAATAAGTCACTTGCAGCTGAATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR CAA 90 bp | AAACAGAATATACTGAGACTCAATATAGCGCCTCTCATTTCTAGGCCCCATGCCGGATGCCCTGCAACTTaGATCAGTTCCAGCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: KQNILRLNIAPLISRPHAGCPAT*ISSSTV Trigger: CACAGTGCTGGAACTGATCAAAGTTGCAGGGCATCC...GGCATGGGGCCTAGAAATGAGAGGCGCTATATTGAGTCTCAGTATATTCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS TCA 90 bp | GGGTCCAAACGGCTAAAGGCTCCTTTGGTTTTGATAGGTCCTGGCTaGATTATGTTGAAACGCATTCCATATCTACCCCATTCAGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: GSKRLKAPLVLIGPG*IMLKRIPYLPHSAA Trigger: TGCAGCTGAATGGGGTAGATATGGAATGCGTTTCAACATAATTCAGCCAGGACCTATCAAAACCAAAGGAGCCTTTAGCCGTTTGGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS CCA 90 bp | AGTCGGGTCCAAACGGCTAAAGGCTCCTTTGGTTTTGATAGGTCCTaGCTGAATTATGTTGAAACGCATTCCATATCTACCCCATTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SRVQTAKGSFGFDRS*LNYVETHSISTPFS Trigger: GCTGAATGGGGTAGATATGGAATGCGTTTCAACATAATTCAGCCAGGACCTATCAAAACCAAAGGAGCCTTTAGCCGTTTGGACCCGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR CAA 90 bp | ACTCCTAAGCTTCTTCTATTTCACCAGATCACAGAAGCCTACTCCTGTTTCCATATGGTCTTCCAGCCATaGGGAGTCAGTCTCTCACTG | + |
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Preference number: 5 (lower is better) Translates to: TPKLLLFHQITEAYSCFHMVFQP*GVSLSL Trigger: CAGTGAGAGACTGACTCCCAATGGCTGGAAGACCAT...ATGGAAACAGGAGTAGGCTTCTGTGATCTGGTGAAATAGAAGAAGCTTAGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR CAA 90 bp | TCAGTACTATCAAAGCTTTTTCAACACACCAACCAGAGGCACTACAGGTGGAGAGCTTCCACGCCTGATTaGGCTGAAGAACTTGGCATT | + |
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Preference number: 5 (lower is better) Translates to: SVLSKLFQHTNQRHYRWRASTPD*AEELGI Trigger: AATGCCAAGTTCTTCAGCCAAATCAGGCGTGGAAGC...TCTCCACCTGTAGTGCCTCTGGTTGGTGTGTTGAAAAAGCTTTGATAGTACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS CCA 90 bp | AACGCATTCCATATCTACCCCATTCAGCTGCAAGTGACTTATTCATaGCTTCCACGCCTGATTTGGCTGAAGAACTTGGCATTACAAAGC | + |
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Preference number: 5 (lower is better) Translates to: NAFHIYPIQLQVTYS*LPRLIWLKNLALQS Trigger: GCTTTGTAATGCCAAGTTCTTCAGCCAAATCAGGCGTGGAAGCCATGAATAAGTCACTTGCAGCTGAATGGGGTAGATATGGAATGCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR CAA 90 bp | AAACAGAATATACTGAGACTCAATATAGCGCCTCTCATTTCTAGGCCCCATGCCATTTGGCTGAAGAACTaGGCATTACAAAGCCTGATC | + |
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Preference number: 5 (lower is better) Translates to: KQNILRLNIAPLISRPHAIWLKN*ALQSLI Trigger: GATCAGGCTTTGTAATGCCAAGTTCTTCAGCCAAAT...GGCATGGGGCCTAGAAATGAGAGGCGCTATATTGAGTCTCAGTATATTCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS-3UTR CAA 90 bp | GCCTACTCCTGTTTCCATTTTCCACCTTTCCACACATATTTCAGTACTATCAAAACCTTCTTTAGAGAGTaGAATTCACCTGACAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: AYSCFHFPPFHTYFSTIKTFFRE*NSPDRN Trigger: ATTTCTGTCAGGTGAATTCAACTCTCTAAAGAAGGT...TTTGATAGTACTGAAATATGTGTGGAAAGGTGGAAAATGGAAACAGGAGTAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS GCA 72 bp | GGGAGTCAGTCTCTCACTGGGGGAAATGAAGTTCCCTaGCGCGTTGTTTATCACCACATCCGGATGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: GSQSLTGGNEVP*RVVYHHIRMPC Trigger: GCAGGGCATCCGGATGTGGTGATAAACAACGCGGCAGGGAACTTCATTTCCCCCAGTGAGAGACTGACTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS TCA 72 bp | TCCAGCCATTGGGAGTCAGTCTCTCACTGGGGGAAATaGAGTTCCCTGCCGCGTTGTTTATCACCACATCCG | + |
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Preference number: 6 (lower is better) Translates to: SSHWESVSHWGK*SSLPRCLSPHP Trigger: CGGATGTGGTGATAAACAACGCGGCAGGGAACTTCATTTCCCCCAGTGAGAGACTGACTCCCAATGGCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS GCA 72 bp | ACACTGGGCACCCAGGGTAGACAAGAAAGTTGTCATTaGCTTGCCAAGGCCAGTCCCTCCTCCAGTAATGAA | + |
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Preference number: 6 (lower is better) Translates to: TLGTQGRQESCH*LAKASPSSSNE Trigger: TTCATTACTGGAGGAGGGACTGGCCTTGGCAAGGCAATGACAACTTTCTTGTCTACCCTGGGTGCCCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS GCA 72 bp | CCCTGCCGCGTTGTTTATCACCACATCCGGATGCCCTaGAACTTTGATCAGTTCCAGCACTGTGTTATGTAC | + |
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Preference number: 6 (lower is better) Translates to: PCRVVYHHIRMP*NFDQFQHCVMY Trigger: GTACATAACACAGTGCTGGAACTGATCAAAGTTGCAGGGCATCCGGATGTGGTGATAAACAACGCGGCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS CAA 90 bp | TTCCCTGCCGCGTTGTTTATCACCACATCCGGATGCCCTGCAACTTaGATCAGTTCCAGCACTGTGTTATGTACCATATCAGGATCTCGA | + |
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Preference number: 6 (lower is better) Translates to: FPAALFITTSGCPAT*ISSSTVLCTISGSR Trigger: TCGAGATCCTGATATGGTACATAACACAGTGCTGGAACTGATCAAAGTTGCAGGGCATCCGGATGTGGTGATAAACAACGCGGCAGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS CAA 90 bp | CCCCATTCAGCTGCAAGTGACTTATTCATGGCTTCCACGCCTGATTaGGCTGAAGAACTTGGCATTACAAAGCCTGATCCACTCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PHSAASDLFMASTPD*AEELGITKPDPLSA Trigger: TGCTGAGAGTGGATCAGGCTTTGTAATGCCAAGTTCTTCAGCCAAATCAGGCGTGGAAGCCATGAATAAGTCACTTGCAGCTGAATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS CCA 72 bp | CTGCAAGTGACTTATTCATGGCTTCCACGCCTGATTTaGCTGAAGAACTTGGCATTACAAAGCCTGATCCAC | + |
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Preference number: 6 (lower is better) Translates to: LQVTYSWLPRLI*LKNLALQSLIH Trigger: GTGGATCAGGCTTTGTAATGCCAAGTTCTTCAGCCAAATCAGGCGTGGAAGCCATGAATAAGTCACTTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS CCA 72 bp | CATATCTACCCCATTCAGCTGCAAGTGACTTATTCATaGCTTCCACGCCTGATTTGGCTGAAGAACTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: HIYPIQLQVTYS*LPRLIWLKNLA Trigger: TGCCAAGTTCTTCAGCCAAATCAGGCGTGGAAGCCATGAATAAGTCACTTGCAGCTGAATGGGGTAGATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS CAA 72 bp | GCTGCAAGTGACTTATTCATGGCTTCCACGCCTGATTaGGCTGAAGAACTTGGCATTACAAAGCCTGATCCA | + |
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Preference number: 6 (lower is better) Translates to: AASDLFMASTPD*AEELGITKPDP Trigger: TGGATCAGGCTTTGTAATGCCAAGTTCTTCAGCCAAATCAGGCGTGGAAGCCATGAATAAGTCACTTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS CAA 72 bp | TATTCATGGCTTCCACGCCTGATTTGGCTGAAGAACTaGGCATTACAAAGCCTGATCCACTCTCAGCATAGA | + |
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Preference number: 6 (lower is better) Translates to: YSWLPRLIWLKN*ALQSLIHSQHR Trigger: TCTATGCTGAGAGTGGATCAGGCTTTGTAATGCCAAGTTCTTCAGCCAAATCAGGCGTGGAAGCCATGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS TCA 72 bp | CGGCTAAAGGCTCCTTTGGTTTTGATAGGTCCTGGCTaGATTATGTTGAAACGCATTCCATATCTACCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RLKAPLVLIGPG*IMLKRIPYLPH Trigger: ATGGGGTAGATATGGAATGCGTTTCAACATAATTCAGCCAGGACCTATCAAAACCAAAGGAGCCTTTAGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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| CDS CCA 72 bp | CAAACGGCTAAAGGCTCCTTTGGTTTTGATAGGTCCTaGCTGAATTATGTTGAAACGCATTCCATATCTACC | + |
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Preference number: 6 (lower is better) Translates to: QTAKGSFGFDRS*LNYVETHSIST Trigger: GGTAGATATGGAATGCGTTTCAACATAATTCAGCCAGGACCTATCAAAACCAAAGGAGCCTTTAGCCGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029877.9 |
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