RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DEAF1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058886

Ensembl transcript IDs: ENSMUST00000080553.9, ENSMUST00000209397.2, ENSMUST00000209600.2, ENSMUST00000209608.2, ENSMUST00000210062.2, ENSMUST00000210816.2, ENSMUST00000210830.2, ENSMUST00000211146.2, ENSMUST00000211537.2

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTACCACCTTTCTCCTGGCCAGGTGCCAGTGGGGTAGGAGGAGACTaGGGACCTGGAGTGAGAGGTGCTGCTGGGCCCTTCAGCCCAGTG +
Preference number: 1 (lower is better)
Translates to: VPPFSWPGASGVGGD*GPGVRGAAGPFSPV
Trigger: CACTGGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR CCA 90 bp CAGTGGGGTAGGAGGAGACTGGGGACCTGGAGTGAGAGGTGCTGCTaGGCCCTTCAGCCCAGTGGTCTCCACAATGCTCCCATCTGTGTG +
Preference number: 1 (lower is better)
Translates to: QWGRRRLGTWSERCC*ALQPSGLHNAPICV
Trigger: CACACAGATGGGAGCATTGTGGAGACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR GCA 90 bp CGAAGGGTCCCAGTTGTACTTGGTACCACCTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGACTGGGGACCTGGAGTGAGAGGTGC +
Preference number: 1 (lower is better)
Translates to: RRVPVVLGTTFLLAR*QWGRRRLGTWSERC
Trigger: GCACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR CCA 90 bp GTCCCAGTTGTACTTGGTACCACCTTTCTCCTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGGACCTGGAGTGAGAGGTGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: VPVVLGTTFLLARCQ*GRRRLGTWSERCCW
Trigger: CCAGCAGCACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR CCA 90 bp TCATACACCGAAGGGTCCCAGTTGTACTTGGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTAGGAGGAGACTGGGGACCTGGAGTG +
Preference number: 1 (lower is better)
Translates to: SYTEGSQLYLVPPFS*PGASGVGGDWGPGV
Trigger: CACTCCAGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR TCA 90 bp GCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTGACACATaGCTGCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTGGGT +
Preference number: 1 (lower is better)
Translates to: AAGTLTHGLPAAVDT*LLFPLCINLHSRLG
Trigger: ACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR TCA 90 bp CCTTGTGGCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTaGCACATGACTGTCTATGGTAGCCTGTCTGGCTTGAACTTGCTA +
Preference number: 1 (lower is better)
Translates to: PCGSRYTHSWPPGRS*HMTVYGSLSGLNLL
Trigger: TAGCAAGTTCAAGCCAGACAGGCTACCATAGACAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGCCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
3UTR TCA 90 bp CCTTGTGGCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTaGCACATGACTGCTCTTTCCTCTCTGTATCAACCTGCATTCTCG +
Preference number: 1 (lower is better)
Translates to: PCGSRYTHSWPPGRS*HMTALSSLYQPAFS
Trigger: CGAGAATGCAGGTTGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGCCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR CCA 90 bp ACCTGCCTCTTGCACTGTGGCTCCTGCAAAGACATCACCTTGGGCTaGGCTCTCAGAGATGACAGCAGTGGCCTCTACAGTGGATGCTCT +
Preference number: 1 (lower is better)
Translates to: TCLLHCGSCKDITLG*ALRDDSSGLYSGCS
Trigger: AGAGCATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000210062.2
ENSMUST00000210816.2
ENSMUST00000210830.2
3UTR CCA 90 bp TGCACACCTGCCTCTTGCACTGTGGCTCCTGCAAAGACATCACCTTaGGCTGGGCTCTCAGAGATGACAGCAGTGGCCTCTACAGTGGAT +
Preference number: 1 (lower is better)
Translates to: CTPASCTVAPAKTSP*AGLSEMTAVASTVD
Trigger: ATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAGGTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000210062.2
ENSMUST00000210816.2
ENSMUST00000210830.2
3UTR TCA 90 bp CTGTGGCTCCTGCAAAGACATCACCTTGGGCTGGGCTCTCAGAGATaGCAGCAGTGGCCTCTACAGTGGATGCTCTGTCAAAGGTCAGTG +
Preference number: 1 (lower is better)
Translates to: LWLLQRHHLGLGSQR*QQWPLQWMLCQRSV
Trigger: CACTGACCTTTGACAGAGCATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000210062.2
ENSMUST00000210816.2
ENSMUST00000210830.2
3UTR TCA 90 bp CACAGCATCCTCCATCGCCCACAGGAGGCAGGGCACTGCAGCGGCTaGTGGAAAACTGTGTTTATGTATCCGATCCGCACCAAGTTACAC +
Preference number: 1 (lower is better)
Translates to: HSILHRPQEAGHCSG*WKTVFMYPIRTKLH
Trigger: GTGTAACTTGGTGCGGATCGGATACATAAACACAGTTTTCCATCAGCCGCTGCAGTGCCCTGCCTCCTGTGGGCGATGGAGGATGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
3UTR CCA 90 bp CTCACGTGCTTTCATCTCACAGATCCAGCTGGGAGCCTGCAGAAATaGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCT +
Preference number: 1 (lower is better)
Translates to: LTCFHLTDPAGSLQK*EGRTQTQQRIQQAA
Trigger: AGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGATCTGTGAGATGAAAGCACGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR TCA 90 bp GCAGCTCATTCTCTTTCTTGCGCCTTTTATAAGGGACGAAGAGCCTaGCAGGGCCACTTACTGCAGAGAGCAGACGTCCACAGGAGCCCT +
Preference number: 1 (lower is better)
Translates to: AAHSLSCAFYKGRRA*QGHLLQRADVHRSP
Trigger: AGGGCTCCTGTGGACGTCTGCTCTCTGCAGTAAGTGGCCCTGTCAGGCTCTTCGTCCCTTATAAAAGGCGCAAGAAAGAGAATGAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR GCA 90 bp CTTGCGCCTTTTATAAGGGACGAAGAGCCTGACAGGGCCACTTACTaGAGAGAGCAGACGTCCACAGGAGCCCTCAGAATGGTAGAGAAG +
Preference number: 1 (lower is better)
Translates to: LAPFIRDEEPDRATY*REQTSTGALRMVEK
Trigger: CTTCTCTACCATTCTGAGGGCTCCTGTGGACGTCTGCTCTCTGCAGTAAGTGGCCCTGTCAGGCTCTTCGTCCCTTATAAAAGGCGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR GCA 90 bp TCTCTGTATCAACCTGCATTCTCGCCTGGGTCACAGCAGCTTCCCTaGAAGAGCTCGCCTGCTTGGCTTGTTCAAACAGCGTCTTCAGCT +
Preference number: 1 (lower is better)
Translates to: SLYQPAFSPGSQQLP*KSSPAWLVQTASSA
Trigger: AGCTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR CCA 90 bp ACACATGACTGCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTGCAAGAGCTCGCCTGCTTGGCTTGT +
Preference number: 1 (lower is better)
Translates to: THDCSFLSVSTCILA*VTAASLQELACLAC
Trigger: ACAAGCCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGCAGTCATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR TCA 90 bp CAAGAGCTCGCCTGCTTGGCTTGTTCAAACAGCGTCTTCAGCTGCTaGGCTGTGTTGAGTAGGGAGTTGACCATCTCTTCCAGGTACAGC +
Preference number: 1 (lower is better)
Translates to: QELACLACSNSVFSC*AVLSRELTISSRYS
Trigger: GCTGTACCTGGAAGAGATGGTCAACTCCCTACTCAACACAGCTCAGCAGCTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR TCA 90 bp GGGGGCAGGGACTGGAGCTCTGGCTCAGGTGGCAGAGTGCCTGTCTaGTTTAAGGTTATGCTTGACTATATATGGAGTTCTACAGCAGCC +
Preference number: 1 (lower is better)
Translates to: GGRDWSSGSGGRVPV*FKVMLDYIWSSTAA
Trigger: GGCTGCTGTAGAACTCCATATATAGTCAAGCATAACCTTAAATCAGACAGGCACTCTGCCACCTGAGCCAGAGCTCCAGTCCCTGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR GCA 90 bp CATAGATGCTCACGTGCTTTCATCTCACAGATCCAGCTGGGAGCCTaGAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGC +
Preference number: 1 (lower is better)
Translates to: HRCSRAFISQIQLGA*RNGKEEPKPSRGSS
Trigger: GCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGATCTGTGAGATGAAAGCACGTGAGCATCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR CCA 90 bp TTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATaGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAG +
Preference number: 1 (lower is better)
Translates to: FQGHNLLITCPASFP*PLFSAAPTVIRGPK
Trigger: CTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR CCA 90 bp CATGGGCACATAGATGCTCACGTGCTTTCATCTCACAGATCCAGCTaGGAGCCTGCAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAG +
Preference number: 1 (lower is better)
Translates to: HGHIDAHVLSSHRSS*EPAEMGRKNPNPAE
Trigger: CTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGATCTGTGAGATGAAAGCACGTGAGCATCTATGTGCCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR TCA 90 bp ACAGGACATGTCCTGATATCGATGCTGCGTTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGGACCCCACGTTGGCCACAGTCACTG +
Preference number: 1 (lower is better)
Translates to: TGHVLISMLRLPLML*RRYLQRTPRWPQSL
Trigger: CAGTGACTGTGGCCAACGTGGGGTCCTCTGCAGATAACGTCTTCACAACATCAGTGGCAAACGCAGCATCGATATCAGGACATGTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR CCA 90 bp ACATGGACTCCTTGCCAGTGGACTTTGCCCAATGCAGGCCTTACATaGGCACATAGATGCTCACGTGCTTTCATCTCACAGATCCAGCTG +
Preference number: 1 (lower is better)
Translates to: TWTPCQWTLPNAGLT*AHRCSRAFISQIQL
Trigger: CAGCTGGATCTGTGAGATGAAAGCACGTGAGCATCTATGTGCCCATGTAAGGCCTGCATTGGGCAAAGTCCACTGGCAAGGAGTCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR CCA 90 bp AGAAGCAATCAATTTAATAGGGCACAAGGAACAGAAACGACTCCATaGAGAGTGTTGGGAGGCCACAGCAGCTGCCCCAACCCAGACCCA +
Preference number: 1 (lower is better)
Translates to: RSNQFNRAQGTETTP*RVLGGHSSCPNPDP
Trigger: TGGGTCTGGGTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTGATTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR CCA 90 bp CGTGGCAGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTaGAGTTGTGGGCAGCTCATTCTCTTTCTTGCGCCTTTTATAAGG +
Preference number: 1 (lower is better)
Translates to: RGRKQGDVLGGILLH*SCGQLILFLAPFIR
Trigger: CCTTATAAAAGGCGCAAGAAAGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR GCA 90 bp GGCCACAGTCACTGTGGTCACTTCTTTCTCCCTTTGCAAAGAAGCTaGAAGTCCCATAGGTCTAGGACACCTCCTTGTCGATCAAGACAT +
Preference number: 1 (lower is better)
Translates to: GHSHCGHFFLPLQRS*KSHRSRTPPCRSRH
Trigger: ATGTCTTGATCGACAAGGAGGTGTCCTAGACCTATGGGACTTGCAGCTTCTTTGCAAAGGGAGAAAGAAGTGACCACAGTGACTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR CCA 90 bp AGCCTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATaGACGTCATCAGCCTGGACAGTGACAGACGCTGACTGGCCACAC +
Preference number: 1 (lower is better)
Translates to: SLAQTATFSITLSST*TSSAWTVTDADWPH
Trigger: GTGTGGCCAGTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000211146.2
3UTR TCA 90 bp TTTCTATCACACTTTCTTCAACATGGACGTCATCAGCCTGGACAGTaGCAGACGCTGACTGGCCACACACATGCTGATGGTCTTTCCAGT +
Preference number: 1 (lower is better)
Translates to: FLSHFLQHGRHQPGQ*QTLTGHTHADGLSS
Trigger: ACTGGAAAGACCATCAGCATGTGTGTGGCCAGTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000211146.2
3UTR GCA 90 bp ACAACTATTAGTGTGGCTTTTTCAGTGTTCAGGCTGTCACCGATCTaGAGGGCTGTCCTACCAGACAGGACATGTCCTGATATCGATGCT +
Preference number: 1 (lower is better)
Translates to: TTISVAFSVFRLSPI*RAVLPDRTCPDIDA
Trigger: AGCATCGATATCAGGACATGTCCTGTCTGGTAGGACAGCCCTGCAGATCGGTGACAGCCTGAACACTGAAAAAGCCACACTAATAGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR CCA 90 bp GGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGGAGAAGCCTaGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGA +
Preference number: 1 (lower is better)
Translates to: GLSLRWLHSRAQGEA*LKQQLFLSHFLQHG
Trigger: TCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGCTTCTCCTTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR GCA 90 bp GGAGCTCTGGCTCAGGTGGCAGAGTGCCTGTCTGATTTAAGGTTATaGTTGACTATATATGGAGTTCTACAGCAGCCTGATATATATGAA +
Preference number: 1 (lower is better)
Translates to: GALAQVAECLSDLRL*LTIYGVLQQPDIYE
Trigger: TTCATATATATCAGGCTGCTGTAGAACTCCATATATAGTCAAGCATAACCTTAAATCAGACAGGCACTCTGCCACCTGAGCCAGAGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR-3UTR TCA 90 bp TTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGCTGAGGGTGTCACAGTaGAGGTGGTGGCCGCCGTGG +
Preference number: 2 (lower is better)
Translates to: LSGKFPMAPLLSSPHSHQLRVSQ*RWWPPW
Trigger: CCACGGCGGCCACCACCTTCACTGTGACACCCTCAG...CTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR-3UTR CCA 90 bp GGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGGCAAAGACATCACCTTaGGCTGGGCTCTCAGAGATG +
Preference number: 2 (lower is better)
Translates to: GPSSQQPPQSSEGLSLRWAKTSP*AGLSEM
Trigger: CATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGC...CCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR-3UTR CCA 90 bp GTGAGAGGTGCTGCTGGGCCCTTCAGCCCAGTGGTCTCCACAATGCTCCCATCTCAGAGGACCCCACGTTaGCCACAGTCACTGTGGTCA +
Preference number: 2 (lower is better)
Translates to: VRGAAGPFSPVVSTMLPSQRTPR*PQSLWS
Trigger: TGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTG...AGATGGGAGCATTGTGGAGACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR CAA 90 bp CGCACAGGCAACTCGCTGTCATACACCGAAGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGGCCAGGTGCCAGTGGGGTAGGAGGA +
Preference number: 2 (lower is better)
Translates to: RTGNSLSYTEGSQLY*VPPFSWPGASGVGG
Trigger: TCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR CAA 90 bp CGACAGCGCACAGGCAACTCGCTGTCATACACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTCTCCTGGCCAGGTGCCAGTGGGGTA +
Preference number: 2 (lower is better)
Translates to: RQRTGNSLSYTEGSQ*YLVPPFSWPGASGV
Trigger: TACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGTGCGCTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR-3UTR CCA 90 bp GTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATaGCTTCACAGCAGAGCTCAA +
Preference number: 2 (lower is better)
Translates to: VRQVSHGPSSQQPPQSSEGLSLR*LHSRAQ
Trigger: TTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCC...CTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR-3UTR CCA 90 bp TGGGGGTGGACGGTGGCACGGCCAATGCGGGCAGCGATGTCAGGACAATTTTGGCTGCCTCTTGCACTGTaGCTCCTGCAAAGACATCAC +
Preference number: 2 (lower is better)
Translates to: WGWTVARPMRAAMSGQFWLPLAL*LLQRHH
Trigger: GTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAG...CCAAAATTGTCCTGACATCGCTGCCCGCATTGGCCGTGCCACCGTCCACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR CAA 90 bp CTGCACACCTGCCTCTTGCACTGTGGCTCCTGCAAAGACATCACCTaGGGCTGGGCTCTCAGAGATGACAGCAGTGGCCTCTACAGTGGA +
Preference number: 2 (lower is better)
Translates to: LHTCLLHCGSCKDIT*GWALRDDSSGLYSG
Trigger: TCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAGGTGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000210062.2
ENSMUST00000210816.2
ENSMUST00000210830.2
3UTR-3UTR GCA 90 bp TGGAAACGGGGCAATCTGGCAGCTGTCCTGATAGCCAGGGTAGTGGGGTTCAGGGACAGGGCCACTTACTaGAGAGAGCAGACGTCCACA +
Preference number: 2 (lower is better)
Translates to: WKRGNLAAVLIARVVGFRDRATY*REQTST
Trigger: TGTGGACGTCTGCTCTCTGCAGTAAGTGGCCCTGTC...CCTGAACCCCACTACCCTGGCTATCAGGACAGCTGCCAGATTGCCCCGTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR-3UTR GCA 90 bp CTGCCTCTTGCACTGTGGCTCCTGCAAAGACATCACCTTGGGCTGGGCTCTCAGGACAGGGCCACTTACTaGAGAGAGCAGACGTCCACA +
Preference number: 2 (lower is better)
Translates to: LPLALWLLQRHHLGLGSQDRATY*REQTST
Trigger: TGTGGACGTCTGCTCTCTGCAGTAAGTGGCCCTGTC...CTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR-3UTR GCA 90 bp TGTTCCGACAGCGCACAGGCAACTCGCTGTCATACACCGAAGGGTCCCAGTTGTTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: CSDSAQATRCHTPKGPSCFLLAR*QWGRRR
Trigger: TCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAA...ACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGTGCGCTGTCGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR-3UTR CCA 90 bp ACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCGGCCTAAGCCTGCGATaGCTTCACAGCAGAGCTCAA +
Preference number: 2 (lower is better)
Translates to: TCPASFPWPLFSAAPTVIGLSLR*LHSRAQ
Trigger: TTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCC...GATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR-3UTR CCA 90 bp TTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGGCTGCCAGCGTTCCTTaGTCTCTGGAAGGAGCTTGT +
Preference number: 2 (lower is better)
Translates to: LSGKFPMAPLLSSPHSHQAASVP*SLEGAC
Trigger: ACAAGCTCCTTCCAGAGACCAAGGAACGCTGGCAGC...CTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR CAA 90 bp ACAGTGAAGGTGGTGGCCGCCGTGGCAGGAAGCAGGGTGATGTTCTaGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCTCATTCTCT +
Preference number: 2 (lower is better)
Translates to: TVKVVAAVAGSRVMF*GESFFTGVVGSSFS
Trigger: AGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCACGGCGGCCACCACCTTCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR-3UTR TCA 90 bp CTGCCTCTTGCACTGTGGCTCCTGCAAAGACATCACCTTGGGCTGGGCTCTCAGTGGCCACACACATGCTaGTGGTCTTTCCAGTCCTTG +
Preference number: 2 (lower is better)
Translates to: LPLALWLLQRHHLGLGSQWPHTC*WSFQSL
Trigger: CAAGGACTGGAAAGACCATCAGCATGTGTGTGGCCA...CTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR-3UTR CCA 90 bp TCGCTGTCATACACCGAAGGGTCCCAGTTGTACTTGGTACCACCTTTCTCCTGGGGGGTAGGAGGAGACTaGGGACCTGGAGTGAGAGGT +
Preference number: 2 (lower is better)
Translates to: SLSYTEGSQLYLVPPFSWGVGGD*GPGVRG
Trigger: ACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCC...CCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR CAA 90 bp ACCTTGTGGCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTaGACACATGACTGCTCTTTCCTCTCTGTATCAACCTGCATTCTC +
Preference number: 2 (lower is better)
Translates to: TLWQPVHSLMASRPQ*THDCSFLSVSTCIL
Trigger: GAGAATGCAGGTTGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGCCACAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR-3UTR TCA 90 bp TTGGGGTGTGATGTTGGCAATGCAGCTTCTGGAAACGGGGCAATCTGGCAGCTGCAGAGTGCCCCATTCTaGAAGCTGCCAGCGTTCCTT +
Preference number: 2 (lower is better)
Translates to: LGCDVGNAASGNGAIWQLQSAPF*KLPAFL
Trigger: AAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTG...CAGCTGCCAGATTGCCCCGTTTCCAGAAGCTGCATTGCCAACATCACACCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR-3UTR TCA 90 bp TTTCCAGTCCTTGCGCTGGCAGAACGTAGAGCAGTAGTTAACCTTGTGGCAGCCCCTCCCGGCCGCAGTTaGCACATGACTGTCTATGGT +
Preference number: 2 (lower is better)
Translates to: FPVLALAERRAVVNLVAAPPGRS*HMTVYG
Trigger: ACCATAGACAGTCATGTGTCAACTGCGGCCGGGAGG...GGCTGCCACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGCAAGGACTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
3UTR-3UTR TCA 90 bp GATGCTCTGTCAAAGGTCAGTGCTCCAGAGGTAGTGATCTGTCCTGAGGGTGTCAAGGGACGAAGAGCCTaGCAGGGCCACTCAGAGTCA +
Preference number: 2 (lower is better)
Translates to: DALSKVSAPEVVICPEGVKGRRA*QGHSES
Trigger: TGACTCTGAGTGGCCCTGTCAGGCTCTTCGTCCCTT...GACACCCTCAGGACAGATCACTACCTCTGGAGCACTGACCTTTGACAGAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209397.2
3UTR-3UTR GCA 90 bp CCTGATAGCCAGGGTAGTGGGGTTCAGGGTGGCCAACCCTGCAGGGAGGCTGCAGCTCATTCTCTTTCTTaGGCCTTTTATAAGGGACGA +
Preference number: 2 (lower is better)
Translates to: PDSQGSGVQGGQPCREAAAHSLS*AFYKGR
Trigger: TCGTCCCTTATAAAAGGCGCAAGAAAGAGAATGAGC...TGCAGCCTCCCTGCAGGGTTGGCCACCCTGAACCCCACTACCCTGGCTATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR-3UTR GCA 90 bp TCTTCCAGGTACAGCCAGCTCCGATGTTCTGACATCTCCAGCCCACTGACCACGGGCCTCTACAGTGGATaGTCTGTCAAAGGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: SSRYSQLRCSDISSPLTTGLYSG*SVKGQC
Trigger: GCACTGACCTTTGACAGAGCATCCACTGTAGAGGCC...CGTGGTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGGCTGTACCTGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR-3UTR CCA 90 bp GGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCTCATTCTCCCGGCAAGTTTCCCATaGCCCCTCTTCTCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: GDVLGGILLHWSCGQLILPASFP*PLFSAA
Trigger: GGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGG...GAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR CAA 90 bp CAATTTAATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTaGGGAGGCCACAGCAGCTGCCCCAACCCAGACCCAGCTTCATGG +
Preference number: 2 (lower is better)
Translates to: QFNRAQGTETTPWRV*GGHSSCPNPDPASW
Trigger: CCATGAAGCTGGGTCTGGGTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR-3UTR CCA 90 bp TTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCCCGGCAAGTTTCCCATaGCCCCTCTTCTCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: FQGHNLLITCPASFPWPLPASFP*PLFSAA
Trigger: GGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGG...GAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR-3UTR CCA 90 bp AATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCGAGGCCCTCAGAACATaGACTCCTTGCCAGTGGACT +
Preference number: 2 (lower is better)
Translates to: NRAQGTETTPWRVLGGHSEALRT*TPCQWT
Trigger: AGTCCACTGGCAAGGAGTCCATGTTCTGAGGGCCTC...GCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR CAA 90 bp GTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACTaGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: VSGRSLFPRAQSVNN*SGKFPMAPLLSSPH
Trigger: GTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR CAA 90 bp GGACCCCACGTTGGCCACAGTCACTGTGGTCACTTCTTTCTCCCTTaGCAAAGAAGCTGCAAGTCCCATAGGTCTAGGACACCTCCTTGT +
Preference number: 2 (lower is better)
Translates to: GPHVGHSHCGHFFLP*QRSCKSHRSRTPPC
Trigger: ACAAGGAGGTGTCCTAGACCTATGGGACTTGCAGCTTCTTTGCAAAGGGAGAAAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR-3UTR TCA 90 bp TTCCGACAGCGCACAGGCAACTCGCTGTCATACACCGAAGGGTCCCAGTTGTACTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: FRQRTGNSLSYTEGSQLYLPLML*RRYLQR
Trigger: CCTCTGCAGATAACGTCTTCACAACATCAGTGGCAA...GTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGTGCGCTGTCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR-3UTR CCA 90 bp GGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCTCATTCTCGGCCTAAGCCTGCGATaGCTTCACAGCAGAGCTCAA +
Preference number: 2 (lower is better)
Translates to: GDVLGGILLHWSCGQLILGLSLR*LHSRAQ
Trigger: TTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCC...GAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR-3UTR CCA 90 bp TCAAAGGTCAGTGCTCCAGAGGTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGTGGACGTCATCAGCCTaGACAGTGACAGACGCTGAC +
Preference number: 2 (lower is better)
Translates to: SKVSAPEVVICPEGVTVKWTSSA*TVTDAD
Trigger: GTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCA...CTTCACTGTGACACCCTCAGGACAGATCACTACCTCTGGAGCACTGACCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR-3UTR CCA 90 bp TGCAGAGGACCCCACGTTGGCCACAGTCACTGTGGTCACTTCTTTCTCCCTTTGTTGTCGATCAAGACATaGCAGACTCCAGCCTCATCC +
Preference number: 2 (lower is better)
Translates to: CRGPHVGHSHCGHFFLPLLSIKT*QTPASS
Trigger: GGATGAGGCTGGAGTCTGCCATGTCTTGATCGACAA...CAAAGGGAGAAAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR-3UTR CCA 90 bp ATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGAAAAGGCCAGGCGGCGGCGGTaGTGGTGGCAGCTCATGCCT +
Preference number: 2 (lower is better)
Translates to: MEFYSSLIYMKPCLKDEKARRRR*WWQLMP
Trigger: AGGCATGAGCTGCCACCACCACCGCCGCCGCCTGGC...CTTTTCGTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR-3UTR GCA 90 bp AGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCTGGGCTGTAGCAGAGTaGCCCATTCTGAAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: RAQSVNNLSGKFPMAPLLWAVAE*PILKAA
Trigger: GGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCA...GAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR-3UTR CCA 90 bp CCAGTCCTTGCGCTGGCAGAACGTAGAGCAGTAGTTAACCTTGTGGCAGCCGGTACACTTTCTTCAACATaGACGTCATCAGCCTGGACA +
Preference number: 2 (lower is better)
Translates to: PVLALAERRAVVNLVAAGTLSST*TSSAWT
Trigger: TGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGT...ACCGGCTGCCACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGCAAGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000211146.2
3UTR-3UTR GCA 90 bp GCCCTGGTGTTGAGACGCTACAGGAAAACATGGTGGTCACAAGGTCACAGCATCTCTGTCAAAGGTCAGTaGTCCAGAGGTAGTGATCTG +
Preference number: 2 (lower is better)
Translates to: ALVLRRYRKTWWSQGHSISVKGQ*SRGSDL
Trigger: CAGATCACTACCTCTGGAGCACTGACCTTTGACAGA...GATGCTGTGACCTTGTGACCACCATGTTTTCCTGTAGCGTCTCAACACCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
3UTR-3UTR GCA 90 bp GGCAACTCGCTGTCATACACCGAAGGGTCCCAGTTGTACTTGGTACCACCTTTCCCTTTGCAAAGAAGCTaGAAGTCCCATAGGTCTAGG +
Preference number: 2 (lower is better)
Translates to: GNSLSYTEGSQLYLVPPFPLQRS*KSHRSR
Trigger: CCTAGACCTATGGGACTTGCAGCTTCTTTGCAAAGG...GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR-3UTR TCA 90 bp TGTTTATTAACAGATAAGACAGGTATGTACACGTGGCATAGGGCACCCCAAGGGCAGAGTGCCCCATTCTaGAAGCTGCCAGCGTTCCTT +
Preference number: 2 (lower is better)
Translates to: CLLTDKTGMYTWHRAPQGQSAPF*KLPAFL
Trigger: AAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTG...CCCTTGGGGTGCCCTATGCCACGTGTACATACCTGTCTTATCTGTTAATAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR CAA 90 bp TTTGCCACTGATGTTGTGAAGACGTTATCTGCAGAGGACCCCACGTaGGCCACAGTCACTGTGGTCACTTCTTTCTCCCTTTGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: FATDVVKTLSAEDPT*ATVTVVTSFSLCKE
Trigger: TTCTTTGCAAAGGGAGAAAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGCAGATAACGTCTTCACAACATCAGTGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR-3UTR TCA 90 bp CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACTCTTGCAATGTTCTGTaGGGCCTGCTGGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: LYMEFYSSLIYMKPCLKDSCNVL*GLLGQA
Trigger: GGCCTGGCCCAGCAGGCCTCACAGAACATTGCAAGA...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR-3UTR TCA 90 bp CAGAGAAAAGGAGCCAGCAGAAGGTTCGAGGGCAGTCCAGGCTACATAAAACCCAACAATGACACTGGATaGCCATTCTTGCAATGTTCT +
Preference number: 2 (lower is better)
Translates to: QRKGASRRFEGSPGYIKPNNDTG*PFLQCS
Trigger: AGAACATTGCAAGAATGGTCATCCAGTGTCATTGTT...GGGTTTTATGTAGCCTGGACTGCCCTCGAACCTTCTGCTGGCTCCTTTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR-3UTR GCA 90 bp GAGAAGCCTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACATCCATGAAGAGCACTaGTGCCAGGCAAGCACACAG +
Preference number: 2 (lower is better)
Translates to: EKPGSNSNFFYHTFFNMDIHEEH*CQASTQ
Trigger: CTGTGTGCTTGCCTGGCAGCAGTGCTCTTCATGGAT...GTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR CAA 90 bp GCTCTGGCTCAGGTGGCAGAGTGCCTGTCTGATTTAAGGTTATGCTaGACTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACC +
Preference number: 2 (lower is better)
Translates to: ALAQVAECLSDLRLC*TIYGVLQQPDIYET
Trigger: GGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAGTCAAGCATAACCTTAAATCAGACAGGCACTCTGCCACCTGAGCCAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR-3UTR CCA 90 bp CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGGGAGCCTGCAGAAATaGGAAGGAAGAACCCAAACC +
Preference number: 2 (lower is better)
Translates to: LYMEFYSSLIYMKPCLKDGSLQK*EGRTQT
Trigger: GGTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCC...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR-3UTR CCA 90 bp AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGTCTCACAGATCCAGCTaGGAGCCTGCAGAAATGGGA +
Preference number: 2 (lower is better)
Translates to: NVMRFVLPSPILDYFVLESHRSS*EPAEMG
Trigger: TCCCATTTCTGCAGGCTCCCAGCTGGATCTGTGAGA...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR-3UTR GCA 90 bp AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGATCCAGCTGGGAGCCTaGAGAAATGGGAAGGAAGAA +
Preference number: 2 (lower is better)
Translates to: NVMRFVLPSPILDYFVLEIQLGA*RNGKEE
Trigger: TTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGAT...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR-3UTR GCA 90 bp AGCCAGGGTTGTGTAGAAAAACCTTGTTTCAAACAAACAAACAAACAAACAAACGTGGACTTTGCCCAATaGAGGCCTTACATGGGCACA +
Preference number: 2 (lower is better)
Translates to: SQGCVEKPCFKQTNKQTNVDFAQ*RPYMGT
Trigger: TGTGCCCATGTAAGGCCTGCATTGGGCAAAGTCCAC...GTTTGTTTGTTTGTTTGTTTGTTTGAAACAAGGTTTTTCTACACAACCCTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR-3UTR CCA 90 bp GGGGTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGGGAATCCTTCTTCACTaGAGTTGTGGGCAGCTCATT +
Preference number: 2 (lower is better)
Translates to: GVGVLFTCLLTDKTGMYTGILLH*SCGQLI
Trigger: AATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCC...CGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR GCA 72 bp GATAGCCAGGGTAGTGGGGTTCAGGGTGGCCAACCCTaGAGGGAGGCTGCACACCTGCCTCTTGCACTGTGG +
Preference number: 3 (lower is better)
Translates to: DSQGSGVQGGQP*REAAHLPLALW
Trigger: CCACAGTGCAAGAGGCAGGTGTGCAGCCTCCCTGCAGGGTTGGCCACCCTGAACCCCACTACCCTGGCTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000210062.2
ENSMUST00000210816.2
ENSMUST00000210830.2
3UTR CCA 72 bp CACGGTGGGAGAGACAGCTTTGGTGGGGGTGGACGGTaGCACGGCCAATGCGGGCAGCGATGTCAGGACAAT +
Preference number: 3 (lower is better)
Translates to: HGGRDSFGGGGR*HGQCGQRCQDN
Trigger: ATTGTCCTGACATCGCTGCCCGCATTGGCCGTGCCACCGTCCACCCCCACCAAAGCTGTCTCTCCCACCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR CCA 72 bp AGGAGGAGACTGGGGACCTGGAGTGAGAGGTGCTGCTaGGCCCTTCAGCCCAGTGGTCTCCACAATGCTCCC +
Preference number: 3 (lower is better)
Translates to: RRRLGTWSERCC*ALQPSGLHNAP
Trigger: GGGAGCATTGTGGAGACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGTCCCCAGTCTCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR-3UTR CAA 90 bp GGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGAGCTGCCAGCGTTCCTaGGTCTCTGGAAGGAGCTTG +
Preference number: 3 (lower is better)
Translates to: GPSSQQPPQSSEGLSLRWSCQRS*VSGRSL
Trigger: CAAGCTCCTTCCAGAGACCAAGGAACGCTGGCAGCT...CCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR TCA 72 bp GCAATGTTCTGTGAGGCCTGCTGGGCCAGGCCATGGTaGGAGGCCCTCAGAACATGGACTCCTTGCCAGTGG +
Preference number: 3 (lower is better)
Translates to: AMFCEACWARPW*EALRTWTPCQW
Trigger: CCACTGGCAAGGAGTCCATGTTCTGAGGGCCTCTCACCATGGCCTGGCCCAGCAGGCCTCACAGAACATTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR GCA 72 bp ACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTaGCCCAACCCAGACCCAGCTTCATGGCACTGCCTA +
Preference number: 3 (lower is better)
Translates to: TTPWRVLGGHSS*PNPDPASWHCL
Trigger: TAGGCAGTGCCATGAAGCTGGGTCTGGGTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR GCA 72 bp GGGAGGCTGCACACCTGCCTCTTGCACTGTGGCTCCTaGAAAGACATCACCTTGGGCTGGGCTCTCAGAGAT +
Preference number: 3 (lower is better)
Translates to: GRLHTCLLHCGS*KDITLGWALRD
Trigger: ATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAGGTGTGCAGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000210062.2
ENSMUST00000210816.2
ENSMUST00000210830.2
3UTR CCA 72 bp GAAGGGTCCCAGTTGTACTTGGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTAGGAGGAGACTGGGGA +
Preference number: 3 (lower is better)
Translates to: EGSQLYLVPPFS*PGASGVGGDWG
Trigger: TCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR-3UTR CAA 90 bp GGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGGTCTCTGGAAGGAGCTaGTTTCCAAGGGCACAATCT +
Preference number: 3 (lower is better)
Translates to: GPSSQQPPQSSEGLSLRWVSGRS*FPRAQS
Trigger: AGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGAC...CCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR TCA 72 bp GACCATCTCTTCCAGGTACAGCCAGCTCCGATGTTCTaGCATCTCCAGCCCACTGACCACGGTGGGAGAGAC +
Preference number: 3 (lower is better)
Translates to: DHLFQVQPAPMF*HLQPTDHGGRD
Trigger: GTCTCTCCCACCGTGGTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGGCTGTACCTGGAAGAGATGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR TCA 72 bp CTCCATCGCCCACAGGAGGCAGGGCACTGCAGCGGCTaGTGGAAAACTGTGTTTATGTATCCGATCCGCACC +
Preference number: 3 (lower is better)
Translates to: LHRPQEAGHCSG*WKTVFMYPIRT
Trigger: GGTGCGGATCGGATACATAAACACAGTTTTCCATCAGCCGCTGCAGTGCCCTGCCTCCTGTGGGCGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
3UTR GCA 72 bp CAACCTGCATTCTCGCCTGGGTCACAGCAGCTTCCCTaGAAGAGCTCGCCTGCTTGGCTTGTTCAAACAGCG +
Preference number: 3 (lower is better)
Translates to: QPAFSPGSQQLP*KSSPAWLVQTA
Trigger: CGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR CCA 72 bp ACTCGCTGTCATACACCGAAGGGTCCCAGTTGTACTTaGTACCACCTTTCTCCTGGCCAGGTGCCAGTGGGG +
Preference number: 3 (lower is better)
Translates to: TRCHTPKGPSCT*YHLSPGQVPVG
Trigger: CCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR-3UTR CAA 90 bp TTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGTGCAAAGACATCACCTaGGGCTGGGCTCTCAGAGAT +
Preference number: 3 (lower is better)
Translates to: LSGKFPMAPLLSSPHSHQCKDIT*GWALRD
Trigger: ATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCA...CTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR GCA 72 bp GCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTaGCAGCGTTCCTTGGTCTCTGGAAGGAGCTTGTTT +
Preference number: 3 (lower is better)
Translates to: ALGCSRVPHSES*QRSLVSGRSLF
Trigger: AAACAAGCTCCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR CCA 72 bp ACCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTGCAAGAGCTCGCCTGC +
Preference number: 3 (lower is better)
Translates to: TSFLSVSTCILA*VTAASLQELAC
Trigger: GCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
3UTR CCA 72 bp TGCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTGCAAGAGCTCGCCTGC +
Preference number: 3 (lower is better)
Translates to: CSFLSVSTCILA*VTAASLQELAC
Trigger: GCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR-3UTR CAA 90 bp AATCTGGCAGCTGTCCTGATAGCCAGGGTAGTGGGGTTCAGGGTGGCCAACCCTGTCTCTGGAAGGAGCTaGTTTCCAAGGGCACAATCT +
Preference number: 3 (lower is better)
Translates to: NLAAVLIARVVGFRVANPVSGRS*FPRAQS
Trigger: AGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGAC...AGGGTTGGCCACCCTGAACCCCACTACCCTGGCTATCAGGACAGCTGCCAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR TCA 72 bp AGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTaGCACATGACTGCTCTTTCCTCTCTGTATCAACCT +
Preference number: 3 (lower is better)
Translates to: SRYTHSWPPGRS*HMTALSSLYQP
Trigger: AGGTTGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR CCA 72 bp GCACGGCCAATGCGGGCAGCGATGTCAGGACAATTTTaGGGTGTGATGTTGGCAATGCAGCTTCTGGAAACG +
Preference number: 3 (lower is better)
Translates to: ARPMRAAMSGQF*GVMLAMQLLET
Trigger: CGTTTCCAGAAGCTGCATTGCCAACATCACACCCCAAAATTGTCCTGACATCGCTGCCCGCATTGGCCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR CCA 72 bp CATTGGGCCCTGGTGTTGAGACGCTACAGGAAAACATaGTGGTCACAAGGTCACAGCATCCTCCATCGCCCA +
Preference number: 3 (lower is better)
Translates to: HWALVLRRYRKT*WSQGHSILHRP
Trigger: TGGGCGATGGAGGATGCTGTGACCTTGTGACCACCATGTTTTCCTGTAGCGTCTCAACACCAGGGCCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
3UTR-3UTR CAA 90 bp CCTCCATCGCCCACAGGAGGCAGGGCACTGCAGCGGCTGATGGAAAACTGTGTTGATGTCAGGACAATTTaGGGGTGTGATGTTGGCAAT +
Preference number: 3 (lower is better)
Translates to: PPSPTGGRALQRLMENCVDVRTI*GCDVGN
Trigger: ATTGCCAACATCACACCCCAAAATTGTCCTGACATC...AACACAGTTTTCCATCAGCCGCTGCAGTGCCCTGCCTCCTGTGGGCGATGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
3UTR TCA 72 bp CTGCAAAGACATCACCTTGGGCTGGGCTCTCAGAGATaGCAGCAGTGGCCTCTACAGTGGATGCTCTGTCAA +
Preference number: 3 (lower is better)
Translates to: LQRHHLGLGSQR*QQWPLQWMLCQ
Trigger: TTGACAGAGCATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000210062.2
ENSMUST00000210816.2
ENSMUST00000210830.2
3UTR TCA 72 bp AACATGGACGTCATCAGCCTGGACAGTGACAGACGCTaGCTGGCCACACACATGCTGATGGTCTTTCCAGTC +
Preference number: 3 (lower is better)
Translates to: NMDVISLDSDRR*LATHMLMVFPV
Trigger: GACTGGAAAGACCATCAGCATGTGTGTGGCCAGTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000211146.2
3UTR GCA 72 bp TTTATAAGGGACGAAGAGCCTGACAGGGCCACTTACTaGAGAGAGCAGACGTCCACAGGAGCCCTCAGAATG +
Preference number: 3 (lower is better)
Translates to: FIRDEEPDRATY*REQTSTGALRM
Trigger: CATTCTGAGGGCTCCTGTGGACGTCTGCTCTCTGCAGTAAGTGGCCCTGTCAGGCTCTTCGTCCCTTATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR GCA 72 bp GTGCTGCTGGGCCCTTCAGCCCAGTGGTCTCCACAATaGTCCCATCTGTGTGTACAACTATTAGTGTGGCTT +
Preference number: 3 (lower is better)
Translates to: VLLGPSAQWSPQ*SHLCVQLLVWL
Trigger: AAGCCACACTAATAGTTGTACACACAGATGGGAGCATTGTGGAGACCACTGGGCTGAAGGGCCCAGCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR GCA 72 bp AGGCCCTCAGAACATGGACTCCTTGCCAGTGGACTTTaGCCAATGCAGGCCTTACATGGGCACATAGATGCT +
Preference number: 3 (lower is better)
Translates to: RPSEHGLLASGL*PMQALHGHIDA
Trigger: AGCATCTATGTGCCCATGTAAGGCCTGCATTGGGCAAAGTCCACTGGCAAGGAGTCCATGTTCTGAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR CCA 72 bp GCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTaGTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAAT +
Preference number: 3 (lower is better)
Translates to: AECPILKAASVP*SLEGACFQGHN
Trigger: ATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR-3UTR CAA 90 bp GCGATGTCAGGACAATTTTGGGGTGTGATGTTGGCAATGCAGCTTCTGGAAACGCTGCACACCTGCCTCTaGCACTGTGGCTCCTGCAAA +
Preference number: 3 (lower is better)
Translates to: AMSGQFWGVMLAMQLLETLHTCL*HCGSCK
Trigger: TTTGCAGGAGCCACAGTGCAAGAGGCAGGTGTGCAG...CGTTTCCAGAAGCTGCATTGCCAACATCACACCCCAAAATTGTCCTGACATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR TCA 72 bp TCTCTTTCTTGCGCCTTTTATAAGGGACGAAGAGCCTaGCAGGGCCACTTACTGCAGAGAGCAGACGTCCAC +
Preference number: 3 (lower is better)
Translates to: SLSCAFYKGRRA*QGHLLQRADVH
Trigger: GTGGACGTCTGCTCTCTGCAGTAAGTGGCCCTGTCAGGCTCTTCGTCCCTTATAAAAGGCGCAAGAAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR TCA 72 bp GCCTGCTTGGCTTGTTCAAACAGCGTCTTCAGCTGCTaGGCTGTGTTGAGTAGGGAGTTGACCATCTCTTCC +
Preference number: 3 (lower is better)
Translates to: ACLACSNSVFSC*AVLSRELTISS
Trigger: GGAAGAGATGGTCAACTCCCTACTCAACACAGCTCAGCAGCTGAAGACGCTGTTTGAACAAGCCAAGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR TCA 72 bp GTCCTGATATCGATGCTGCGTTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGGACCCCACGTTGGCCA +
Preference number: 3 (lower is better)
Translates to: VLISMLRLPLML*RRYLQRTPRWP
Trigger: TGGCCAACGTGGGGTCCTCTGCAGATAACGTCTTCACAACATCAGTGGCAAACGCAGCATCGATATCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR GCA 72 bp GCTCTCAGAGATGACAGCAGTGGCCTCTACAGTGGATaGTCTGTCAAAGGTCAGTGCTCCAGAGGTAGTGAT +
Preference number: 3 (lower is better)
Translates to: ALRDDSSGLYSG*SVKGQCSRGSD
Trigger: ATCACTACCTCTGGAGCACTGACCTTTGACAGAGCATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000210062.2
ENSMUST00000210816.2
ENSMUST00000210830.2
3UTR GCA 72 bp AGTGTGGCTTTTTCAGTGTTCAGGCTGTCACCGATCTaGAGGGCTGTCCTACCAGACAGGACATGTCCTGAT +
Preference number: 3 (lower is better)
Translates to: SVAFSVFRLSPI*RAVLPDRTCPD
Trigger: ATCAGGACATGTCCTGTCTGGTAGGACAGCCCTGCAGATCGGTGACAGCCTGAACACTGAAAAAGCCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR CCA 72 bp CCTTGCCAGTGGACTTTGCCCAATGCAGGCCTTACATaGGCACATAGATGCTCACGTGCTTTCATCTCACAG +
Preference number: 3 (lower is better)
Translates to: PCQWTLPNAGLT*AHRCSRAFISQ
Trigger: CTGTGAGATGAAAGCACGTGAGCATCTATGTGCCCATGTAAGGCCTGCATTGGGCAAAGTCCACTGGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR CCA 72 bp CAATTTAATAGGGCACAAGGAACAGAAACGACTCCATaGAGAGTGTTGGGAGGCCACAGCAGCTGCCCCAAC +
Preference number: 3 (lower is better)
Translates to: QFNRAQGTETTP*RVLGGHSSCPN
Trigger: GTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR GCA 72 bp GGGGCAGGGACTGGAGCTCTGGCTCAGGTGGCAGAGTaGCTGTCTGATTTAAGGTTATGCTTGACTATATAT +
Preference number: 3 (lower is better)
Translates to: GAGTGALAQVAE*LSDLRLCLTIY
Trigger: ATATATAGTCAAGCATAACCTTAAATCAGACAGGCACTCTGCCACCTGAGCCAGAGCTCCAGTCCCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR CCA 72 bp AAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTaGAGTTGTGGGCAGCTCATTCTCTTTCTTGCGCCT +
Preference number: 3 (lower is better)
Translates to: KQGDVLGGILLH*SCGQLILFLAP
Trigger: AGGCGCAAGAAAGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR CCA 72 bp TCTATCACACTTTCTTCAACATGGACGTCATCAGCCTaGACAGTGACAGACGCTGACTGGCCACACACATGC +
Preference number: 3 (lower is better)
Translates to: SITLSSTWTSSA*TVTDADWPHTC
Trigger: GCATGTGTGTGGCCAGTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000211146.2
3UTR-3UTR CAA 90 bp AGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCGTCTCTGGAAGGAGCTaGTTTCCAAGGGCACAATCT +
Preference number: 3 (lower is better)
Translates to: RAQSVNNLSGKFPMAPLLVSGRS*FPRAQS
Trigger: AGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGAC...GAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
3UTR GCA 72 bp CACTGTGGTCACTTCTTTCTCCCTTTGCAAAGAAGCTaGAAGTCCCATAGGTCTAGGACACCTCCTTGTCGA +
Preference number: 3 (lower is better)
Translates to: HCGHFFLPLQRS*KSHRSRTPPCR
Trigger: TCGACAAGGAGGTGTCCTAGACCTATGGGACTTGCAGCTTCTTTGCAAAGGGAGAAAGAAGTGACCACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR CCA 72 bp ATAGATGCTCACGTGCTTTCATCTCACAGATCCAGCTaGGAGCCTGCAGAAATGGGAAGGAAGAACCCAAAC +
Preference number: 3 (lower is better)
Translates to: IDAHVLSSHRSS*EPAEMGRKNPN
Trigger: GTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGATCTGTGAGATGAAAGCACGTGAGCATCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR TCA 72 bp GACTGGAGCTCTGGCTCAGGTGGCAGAGTGCCTGTCTaGTTTAAGGTTATGCTTGACTATATATGGAGTTCT +
Preference number: 3 (lower is better)
Translates to: DWSSGSGGRVPV*FKVMLDYIWSS
Trigger: AGAACTCCATATATAGTCAAGCATAACCTTAAATCAGACAGGCACTCTGCCACCTGAGCCAGAGCTCCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR GCA 72 bp GCTCAGGTGGCAGAGTGCCTGTCTGATTTAAGGTTATaGTTGACTATATATGGAGTTCTACAGCAGCCTGAT +
Preference number: 3 (lower is better)
Translates to: AQVAECLSDLRL*LTIYGVLQQPD
Trigger: ATCAGGCTGCTGTAGAACTCCATATATAGTCAAGCATAACCTTAAATCAGACAGGCACTCTGCCACCTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR CCA 72 bp CAAACAGCAACTTTTTCTATCACACTTTCTTCAACATaGACGTCATCAGCCTGGACAGTGACAGACGCTGAC +
Preference number: 3 (lower is better)
Translates to: QTATFSITLSST*TSSAWTVTDAD
Trigger: GTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000211146.2
3UTR-3UTR CAA 90 bp ATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGAAAAGCCAGGACAGCCAGGGTaGTGTAGAAAAACCTTGTTT +
Preference number: 3 (lower is better)
Translates to: MEFYSSLIYMKPCLKDEKPGQPG*CRKTLF
Trigger: AAACAAGGTTTTTCTACACAACCCTGGCTGTCCTGG...CTTTTCGTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR TCA 72 bp AAAGTGCTCTTGGGAAGGGTAAAAGTGTTAAGCATATaGTGGTCTAAGTGTTCAACTGACAGCGTAGTAGTG +
Preference number: 3 (lower is better)
Translates to: KVLLGRVKVLSI*WSKCSTDSVVV
Trigger: CACTACTACGCTGTCAGTTGAACACTTAGACCATCATATGCTTAACACTTTTACCCTTCCCAAGAGCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp GGAGAGACAGCTTTGGTGGGGGTGGACGGTGGCACGGCCAATGCGGGCAGCGATACCTGGAGTGAGAGGTaGTGCTGGGCCCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GETALVGVDGGTANAGSDTWSER*CWALQP
Trigger: GGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGT...ATCGCTGCCCGCATTGGCCGTGCCACCGTCCACCCCCACCAAAGCTGTCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR TCA 90 bp CATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGAACTGGGGACCTGGAGTaGGAGGTGCTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: HGPSSQQPPQSSEGLSLRTGDLE*EVLLGP
Trigger: AGGGCCCAGCAGCACCTCTCACTCCAGGTCCCCAGT...TCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp GGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCAGGCCCAGCTGTTTTaGCGCCGAGTCCGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GPSSQQPPQSSEGLSLRWQAQLF*RRVRVL
Trigger: GAGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTG...CCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR GCA 90 bp GGTCACAAGGTCACAGCATCCTCCATCGCCCACAGGAGGCAGGGCACTGCAGCGACCTGGAGTGAGAGGTaGTGCTGGGCCCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GHKVTASSIAHRRQGTAATWSER*CWALQP
Trigger: GGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGT...CGCTGCAGTGCCCTGCCTCCTGTGGGCGATGGAGGATGCTGTGACCTTGTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp TGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGCAGGGTGGCCAACCCTaGAGGGAGGCTGCACACCTG +
Preference number: 4 (lower is better)
Translates to: WPLFSAAPTVIRGPKPAMQGGQP*REAAHL
Trigger: CAGGTGTGCAGCCTCCCTGCAGGGTTGGCCACCCTG...CATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR CCA 90 bp TGGGGGTGGACGGTGGCACGGCCAATGCGGGCAGCGATGTCAGGACAATTTTGGCTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: WGWTVARPMRAAMSGQFWLARCQ*GRRRLG
Trigger: CCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAG...CCAAAATTGTCCTGACATCGCTGCCCGCATTGGCCGTGCCACCGTCCACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CCA 90 bp GTGGCCAACCCTGCAGGGAGGCTGCACACCTGCCTCTTGCACTGTGGCTCCTGCGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: VANPAGRLHTCLLHCGSCVPPFS*PGASGV
Trigger: TACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC...GCAGGAGCCACAGTGCAAGAGGCAGGTGTGCAGCCTCCCTGCAGGGTTGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CCA 90 bp CAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTACTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: QVSHGPSSQQPPQSSEGLLARCQ*GRRRLG
Trigger: CCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAG...TAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CCA 90 bp GTGGCCGCCGTGGCAGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTCTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: VAAVAGSRVMFLGESFFTLARCQ*GRRRLG
Trigger: CCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAG...AGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCACGGCGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR TCA 90 bp CACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACCTGAGGGTGTCACAGTaGAGGTGGTGGCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: HLGGKGRRISEFEASLVYLRVSQ*RWWPPW
Trigger: CCACGGCGGCCACCACCTTCACTGTGACACCCTCAG...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp CCAGTTGTACTTGGTACCACCTTTCTCCTGGCCAGGTGCCAGTGGGGTAGGAGGCAGGCCCAGCTGTTTTaGCGCCGAGTCCGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PVVLGTTFLLARCQWGRRQAQLF*RRVRVL
Trigger: GAGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTG...CCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
CDS-3UTR GCA 90 bp GTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCCGAGTCCTCGTCTCTaGTTAACACCGGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: VSHGPSSQQPPQSSEGLSPSPRL*LTPAPP
Trigger: CGGAGGAGCCGGTGTTAAGCAGAGACGAGGACTCGG...GCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGCTCCGCCTCGGAGTCTaGGTCCTCCTCCGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GTRNRNDSMESVGRPQQLLRLGV*VLLRVL
Trigger: GAGGACTCGGAGGAGGACGCAGACTCCGAGGCGGAG...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp CATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGAAGGCTGTCACCGATCTaGAGGGCTGTCCTACCAGAC +
Preference number: 4 (lower is better)
Translates to: HGPSSQQPPQSSEGLSLRRLSPI*RAVLPD
Trigger: GTCTGGTAGGACAGCCCTGCAGATCGGTGACAGCCT...TCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGCAGGGTGGCCAACCCTaGAGGGAGGCTGCACACCTG +
Preference number: 4 (lower is better)
Translates to: GTRNRNDSMESVGRPQQLQGGQP*REAAHL
Trigger: CAGGTGTGCAGCCTCCCTGCAGGGTTGGCCACCCTG...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGCGGTGGCACGGCCAATaGGGGCAGCGATGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GTRNRNDSMESVGRPQQLRWHGQ*GQRCQD
Trigger: GTCCTGACATCGCTGCCCGCATTGGCCGTGCCACCG...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp GGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGTGGCCACAGTCACTGTaGTCACTTCTGCGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: GPWAVAECPILKAASVPWWPQSL*SLLRRR
Trigger: CCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCA...CCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CCA 90 bp CACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACCTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: HLGGKGRRISEFEASLVYLARCQ*GRRRLG
Trigger: CCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAG...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp GGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGTGGACGTCATCAGCCTaGACAGTGACAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: GPSSQQPPQSSEGLSLRWWTSSA*TVTDAD
Trigger: GTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCA...CCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CCA 90 bp GAGGTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGGTGGTGGCCGCCGTGGCAGGGGTAGGAGGAGACTaGGGACCAGGACATGTCCTG +
Preference number: 4 (lower is better)
Translates to: EVVICPEGVTVKVVAAVAGVGGD*GPGHVL
Trigger: CAGGACATGTCCTGGTCCCCAGTCTCCTCCTACCCC...TGCCACGGCGGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209397.2
CDS-3UTR TCA 90 bp CAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGTTTTCTCCCTGCTTaGTACACCGGCCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: QVSHGPSSQQPPQSSEGLSFLPA*YTGPGH
Trigger: GTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACT...TAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR TCA 90 bp AGGGCCACTCAGAGTCATGTCATCACAACAGGCGGCACAGGTACAGGAGGCAGCAGTTTTCTCCCTGCTTaGTACACCGGCCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: RATQSHVITTGGTGTGGSSFLPA*YTGPGH
Trigger: GTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACT...GCTGCCTCCTGTACCTGTGCCGCCTGTTGTGATGACATGACTCTGAGTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209397.2
CDS-3UTR GCA 90 bp CCAGAGAAAAGGAGCCAGCAGAAGGTTCGAGGGCAGTCCAGGCTACATAAAACCCACTGTGGTCACTTCTaGGAAGGCGGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PEKRSQQKVRGQSRLHKTHCGHF*EGGGGG
Trigger: GCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTG...GGTTTTATGTAGCCTGGACTGCCCTCGAACCTTCTGCTGGCTCCTTTTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp AACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATACCTGGAGTGAGAGGTaGTGCTGGGCCCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: NLSGKFPMAPLLSSPHSHTWSER*CWALQP
Trigger: GGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGT...ATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp CACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACGGGAGGCTGCACACCTaGCTCTTGCACTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: HLGGKGRRISEFEASLVYGRLHT*LLHCGS
Trigger: GGAGCCACAGTGCAAGAGGCAGGTGTGCAGCCTCCC...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp ACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGGAGACGGTGGCACGGCCAATaGGGGCAGCGATGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: TVIRGPKPAMASQQSSRRRWHGQ*GQRCQD
Trigger: GTCCTGACATCGCTGCCCGCATTGGCCGTGCCACCG...TCTCCTTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR GCA 90 bp TCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGTCACAGCAGCTTCCCTaGAAGAGCTCGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SGKFPMAPLLSSPHSHQRSQQLP*KSSPAW
Trigger: CCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGA...CCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CCA 90 bp CCTCCATCGCCCACAGGAGGCAGGGCACTGCAGCGGCTGATGGAAAACTGTGTTTGGCCACAGTCACTGTaGTCACTTCTGCGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: PPSPTGGRALQRLMENCVWPQSL*SLLRRR
Trigger: CCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCA...AACACAGTTTTCCATCAGCCGCTGCAGTGCCCTGCCTCCTGTGGGCGATGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
CDS-3UTR CCA 90 bp TCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGCAGAGGACCCCACGTTaGCCACAGTCACTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SGKFPMAPLLSSPHSHQRQRTPR*PQSLWS
Trigger: TGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTG...CCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CCA 90 bp TTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGTGAGAGGTGCTGCTaGGCCCTTCAGCCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LSGKFPMAPLLSSPHSHQSERCC*ALQPSG
Trigger: ACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCACT...CTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CCA 90 bp TGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAAGTGAGAGGTGCTGCTaGGCCCTTCAGCCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CPASFPWPLFSAAPTVIRSERCC*ALQPSG
Trigger: ACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCACT...TCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CCA 90 bp CAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAGGGGTAGGAGGAGACTaGGGACCTGGAGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QVSHGPSSQQPPQSSEGLGVGGD*GPGVRG
Trigger: ACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCC...TAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CCA 90 bp CCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGGGGGGTAGGAGGAGACTaGGGACCTGGAGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PTVIRGPKPAMASQQSSRGVGGD*GPGVRG
Trigger: ACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCC...CCTTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CCA 90 bp GAGGTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGGTGGTGGCCGCCGTGGCAGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: EVVICPEGVTVKVVAAVAVPPFS*PGASGV
Trigger: TACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC...TGCCACGGCGGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CCA 90 bp CGTGATAGGCTGAGGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RDRLRALGCSRVPHSESCTCILA*VTAASL
Trigger: CAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGT...GCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCCTCAGCCTATCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR TCA 90 bp AGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGTCTCTGGAAGGAGCAGTTTTCTCCCTGCTTaGTACACCGGCCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SRVPHSESCQRSLVSGRSSFLPA*YTGPGH
Trigger: GTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACT...GCTCCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR TCA 90 bp TCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGAGCGTCTTCAGCTGCTaGGCTGTGTTGAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: SGKFPMAPLLSSPHSHQRSVFSC*AVLSRE
Trigger: CTCCCTACTCAACACAGCTCAGCAGCTGAAGACGCT...CCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR TCA 90 bp TGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGTGGCCACACACATGCTaGTGGTCTTTCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: WPLFSAAPTVIRGPKPAMWPHTC*WSFQSL
Trigger: CAAGGACTGGAAAGACCATCAGCATGTGTGTGGCCA...CATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR GCA 90 bp CAGATCCAGCTGGGAGCCTGCAGAAATGGGAAGGAAGAACCCAAACCCAGCAGACAGGCCCAGCTGTTTTaGCGCCGAGTCCGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: QIQLGACRNGKEEPKPSRQAQLF*RRVRVL
Trigger: GAGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTG...TCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp GAGGACCCCACGTTGGCCACAGTCACTGTGGTCACTTCTTTCTCCCTTTGCAAACTCCGCCTCGGAGTCTaGGTCCTCCTCCGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: EDPTLATVTVVTSFSLCKLRLGV*VLLRVL
Trigger: GAGGACTCGGAGGAGGACGCAGACTCCGAGGCGGAG...TTTGCAAAGGGAGAAAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
CDS-3UTR GCA 90 bp GGGCAGCTCATTCTCTTTCTTGCGCCTTTTATAAGGGACGAAGAGCCTGACAGGCACTGTGGTCACTTCTaGGAAGGCGGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GQLILFLAPFIRDEEPDRHCGHF*EGGGGG
Trigger: GCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTG...CCTGTCAGGCTCTTCGTCCCTTATAAAAGGCGCAAGAAAGAGAATGAGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp GAGGTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGGTGGTGGCCGCCGTGGCATACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: EVVICPEGVTVKVVAAVAYQFSP*LIHRPR
Trigger: CCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTA...TGCCACGGCGGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp AACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGCCCCAACCCAGACCCTGCCAGCATAGCGGATaGTTCTCTTCCAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: NDSMESVGRPQQLPQPRPCQHSG*FSSSPC
Trigger: GCAAGGACTGGAAGAGAAGCATCCGCTATGCTGGCA...GGGTCTGGGTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp AGGCTGAGGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTGGCCTCTACAGTGGATaGTCTGTCAAAGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: RLRALGCSRVPHSESCQRGLYSG*SVKGQC
Trigger: GCACTGACCTTTGACAGAGCATCCACTGTAGAGGCC...ACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCCTCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR GCA 90 bp CATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGACTGCAAGAGCTCGCCTaGTTGGCTTGTTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: HGPSSQQPPQSSEGLSLRLQELA*LACSNS
Trigger: GCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAG...TCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CCA 90 bp TGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCTCATTCTCTTTCTTGCGCCCTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: WGNPSSLELWAAHSLSCALARCQ*GRRRLG
Trigger: CCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAG...GGCGCAAGAAAGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CCA 90 bp CATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGAGGTCCCAGTTGTACTTaGTACCACCTTTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: HGPSSQQPPQSSEGLSLRGPSCT*YHLSPG
Trigger: GCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACC...TCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CCA 90 bp GGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGCTGCCTCTTGCACTGTaGCTCCTGCAAAGACATCAC +
Preference number: 4 (lower is better)
Translates to: GPWAVAECPILKAASVPWLPLAL*LLQRHH
Trigger: GTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAG...CCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR TCA 90 bp GGGCTCTCAGAGATGACAGCAGTGGCCTCTACAGTGGATGCTCTGTCAAAGGTCAGTTTTCTCCCTGCTTaGTACACCGGCCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLSEMTAVASTVDALSKVSFLPA*YTGPGH
Trigger: GTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACT...GACCTTTGACAGAGCATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR TCA 90 bp CAGATCCAGCTGGGAGCCTGCAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAAGTTTTCTCCCTGCTTaGTACACCGGCCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: QIQLGACRNGKEEPKPSRSFLPA*YTGPGH
Trigger: GTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACT...TCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR TCA 90 bp ACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCTGGCAGGAAGCAGGGTaGTGTTCTTGGGGGAATCCT +
Preference number: 4 (lower is better)
Translates to: TCPASFPWPLFSAAPTVIWQEAG*CSWGNP
Trigger: AGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCA...GATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR GCA 90 bp GTGGCCTCTACAGTGGATGCTCTGTCAAAGGTCAGTGCTCCAGAGGTAGTGATCCAGGCCCAGCTGTTTTaGCGCCGAGTCCGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: VASTVDALSKVSAPEVVIQAQLF*RRVRVL
Trigger: GAGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTG...GATCACTACCTCTGGAGCACTGACCTTTGACAGAGCATCCACTGTAGAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp GGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCACACTGTGGTCACTTCTaGGAAGGCGGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GHNLLITCPASFPWPLFSHCGHF*EGGGGG
Trigger: GCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTG...TGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp CAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTAACCTGGAGTGAGAGGTaGTGCTGGGCCCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QKWEGRTQTQQRIQQAALTWSER*CWALQP
Trigger: GGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGT...TAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp TGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTAAGCAGCTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: WEGRTQTQQRIQQAALSSFLLAR*QWGRRR
Trigger: TCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAA...GCTGCTTAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp CTGCCTCTTGCACTGTGGCTCCTGCAAAGACATCACCTTGGGCTGGGCTCTCAGTACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LPLALWLLQRHHLGLGSQYQFSP*LIHRPR
Trigger: CCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTA...CTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp GCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCATGCCAGCATAGCGGATaGTTCTCTTCCAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: APTVIRGPKPAMASQQSSCQHSG*FSSSPC
Trigger: GCAAGGACTGGAAGAGAAGCATCCGCTATGCTGGCA...TGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp GCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCACTGCAAGAGCTCGCCTaGTTGGCTTGTTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: APTVIRGPKPAMASQQSSLQELA*LACSNS
Trigger: GCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAG...TGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CCA 90 bp CGCCGTGGCAGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: RRGRKQGDVLGGILLHWSVPPFS*PGASGV
Trigger: TACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC...ACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCACGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CCA 90 bp GGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGAAGAGCTCGCCTGCTTaGCTTGTTCAAACAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GPWAVAECPILKAASVPWKSSPA*LVQTAS
Trigger: AGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTT...CCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CCA 90 bp CCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAATGGACGTCATCAGCCTaGACAGTGACAGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: PPQSSEGLSLRWLHSRAQWTSSA*TVTDAD
Trigger: GTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCA...TTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR TCA 90 bp AGGCTGAGGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RLRALGCSRVPHSESCQRLPLML*RRYLQR
Trigger: CCTCTGCAGATAACGTCTTCACAACATCAGTGGCAA...ACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCCTCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR TCA 90 bp ACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGGAGAAAGGGACGAAGAGCCTaGCAGGGCCACTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: TVIRGPKPAMASQQSSRRKGRRA*QGHSES
Trigger: TGACTCTGAGTGGCCCTGTCAGGCTCTTCGTCCCTT...TCTCCTTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR TCA 90 bp TTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCCTGAGGGTGTCACAGTaGAGGTGGTGGCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: FQGHNLLITCPASFPWPLLRVSQ*RWWPPW
Trigger: CCACGGCGGCCACCACCTTCACTGTGACACCCTCAG...GAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR TCA 90 bp TGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGACAATTTTGGGGTGTaGTGTTGGCAATGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WPLFSAAPTVIRGPKPAMDNFGV*CWQCSF
Trigger: GAAGCTGCATTGCCAACATCACACCCCAAAATTGTC...CATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR GCA 90 bp TTACCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTGGGTCACAGCAGCTTCTCCGCCTCGGAGTCTaGGTCCTCCTCCGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LPLSSLYQPAFSPGSQQLLRLGV*VLLRVL
Trigger: GAGGACTCGGAGGAGGACGCAGACTCCGAGGCGGAG...AAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp CACTGGATGACCATTCTTGCAATGTTCTGTGAGGCCTGCTGGGCCAGGCCATGGTACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: HWMTILAMFCEACWARPWYQFSP*LIHRPR
Trigger: CCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTA...CCATGGCCTGGCCCAGCAGGCCTCACAGAACATTGCAAGAATGGTCATCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp GTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGGTGGTGGCCGCCGTGGCAGGAGCTGCTGGCTCTTCCTaGCATAGCTTCAAACTCAGT +
Preference number: 4 (lower is better)
Translates to: VVICPEGVTVKVVAAVAGAAGSS*HSFKLS
Trigger: ACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGC...TCCTGCCACGGCGGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp GGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCACGGTGGCACGGCCAATaGGGGCAGCGATGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GHNLLITCPASFPWPLFSRWHGQ*GQRCQD
Trigger: GTCCTGACATCGCTGCCCGCATTGGCCGTGCCACCG...TGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CCA 90 bp TTGGGGTGTGATGTTGGCAATGCAGCTTCTGGAAACGGGGCAATCTGGCAGCTGTGGCCACAGTCACTGTaGTCACTTCTGCGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: LGCDVGNAASGNGAIWQLWPQSL*SLLRRR
Trigger: CCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCA...CAGCTGCCAGATTGCCCCGTTTCCAGAAGCTGCATTGCCAACATCACACCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CCA 90 bp CAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTAGGGGTAGGAGGAGACTaGGGACCTGGAGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QKWEGRTQTQQRIQQAALGVGGD*GPGVRG
Trigger: ACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCC...TAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp TGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGTCTCTGGAAGGGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: CSRVPHSESCQRSLVSGRVPPFS*PGASGV
Trigger: TACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC...CCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CCA 90 bp TCCAGGTACAGCCAGCTCCGATGTTCTGACATCTCCAGCCCACTGACCACGGTGGGTCCCAGTTGTACTTaGTACCACCTTTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SRYSQLRCSDISSPLTTVGPSCT*YHLSPG
Trigger: GCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACC...CACCGTGGTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGGCTGTACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
3UTR CAA 72 bp CAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTaGACACATGACTGCTCTTTCCTCTCTGTATCAACC +
Preference number: 4 (lower is better)
Translates to: QPVHSLMASRPQ*THDCSFLSVST
Trigger: GGTTGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
3UTR CAA 72 bp AACTCGCTGTCATACACCGAAGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGGCCAGGTGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: NSLSYTEGSQLY*VPPFSWPGASG
Trigger: CCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
3UTR CAA 72 bp ACAGGCAACTCGCTGTCATACACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTCTCCTGGCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: TGNSLSYTEGSQ*YLVPPFSWPGA
Trigger: GGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
CDS-3UTR TCA 90 bp CAGAGAAAAGGAGCCAGCAGAAGGTTCGAGGGCAGTCCAGGCTACATAAAACCCAAGGGACGAAGAGCCTaGCAGGGCCACTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: QRKGASRRFEGSPGYIKPKGRRA*QGHSES
Trigger: TGACTCTGAGTGGCCCTGTCAGGCTCTTCGTCCCTT...GGGTTTTATGTAGCCTGGACTGCCCTCGAACCTTCTGCTGGCTCCTTTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR TCA 90 bp TGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGTCTCTGGAAGGAGCGTCTTCAGCTGCTaGGCTGTGTTGAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: CSRVPHSESCQRSLVSGRSVFSC*AVLSRE
Trigger: CTCCCTACTCAACACAGCTCAGCAGCTGAAGACGCT...CCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR TCA 90 bp CAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTACCTCCCGGCCGCAGTTaGCACATGACTCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: QKWEGRTQTQQRIQQAALPPGRS*HMTLSS
Trigger: AGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGG...TAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR TCA 90 bp AATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCTGGGAAAGGCTGAGGTaGTGCAGGCATGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: NRAQGTETTPWRVLGGHSWERLR*CRHVSR
Trigger: CCTGCTCACATGCCTGCATCACCTCAGCCTTTCCCA...GCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp AGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGAGGCTGTCACCGATCTaGAGGGCTGTCCTACCAGAC +
Preference number: 4 (lower is better)
Translates to: RKQGDVLGGILLHWSCGQRLSPI*RAVLPD
Trigger: GTCTGGTAGGACAGCCCTGCAGATCGGTGACAGCCT...CTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp CAGAGAAAAGGAGCCAGCAGAAGGTTCGAGGGCAGTCCAGGCTACATAAAACCCAGGCTGTCACCGATCTaGAGGGCTGTCCTACCAGAC +
Preference number: 4 (lower is better)
Translates to: QRKGASRRFEGSPGYIKPRLSPI*RAVLPD
Trigger: GTCTGGTAGGACAGCCCTGCAGATCGGTGACAGCCT...GGGTTTTATGTAGCCTGGACTGCCCTCGAACCTTCTGCTGGCTCCTTTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp GTGGATGCTCTGTCAAAGGTCAGTGCTCCAGAGGTAGTGATCTGTCCTGAGGGTTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VDALSKVSAPEVVICPEGFLLAR*QWGRRR
Trigger: TCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAA...ACCCTCAGGACAGATCACTACCTCTGGAGCACTGACCTTTGACAGAGCATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp CGCCGTGGCAGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGCCAGCATAGCGGATaGTTCTCTTCCAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RRGRKQGDVLGGILLHWSCQHSG*FSSSPC
Trigger: GCAAGGACTGGAAGAGAAGCATCCGCTATGCTGGCA...ACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCACGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp TCTTCCAGGTACAGCCAGCTCCGATGTTCTGACATCTCCAGCCCACTGACCACGTGCCAGCATAGCGGATaGTTCTCTTCCAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SSRYSQLRCSDISSPLTTCQHSG*FSSSPC
Trigger: GCAAGGACTGGAAGAGAAGCATCCGCTATGCTGGCA...CGTGGTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGGCTGTACCTGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGGGCCTCTACAGTGGATaGTCTGTCAAAGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GTRNRNDSMESVGRPQQLGLYSG*SVKGQC
Trigger: GCACTGACCTTTGACAGAGCATCCACTGTAGAGGCC...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp AATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCTGGCCACAGTCACTGTaGTCACTTCTGCGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: NRAQGTETTPWRVLGGHSWPQSL*SLLRRR
Trigger: CCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCA...GCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp AGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGTCTCTGGAAGGAGCGCAAAGACATCACCTTaGGCTGGGCTCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SRVPHSESCQRSLVSGRSAKTSP*AGLSEM
Trigger: CATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGC...GCTCCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR CCA 90 bp GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGGCAAAGACATCACCTTaGGCTGGGCTCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GTRNRNDSMESVGRPQQLAKTSP*AGLSEM
Trigger: CATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGC...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp ACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAAGAGCTCGCCTGCTTaGCTTGTTCAAACAGCGTCT +
Preference number: 4 (lower is better)
Translates to: TCPASFPWPLFSAAPTVIKSSPA*LVQTAS
Trigger: AGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTT...GATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
3UTR CAA 72 bp GGCACGGCCAATGCGGGCAGCGATGTCAGGACAATTTaGGGGTGTGATGTTGGCAATGCAGCTTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: GTANAGSDVRTI*GCDVGNAASGN
Trigger: GTTTCCAGAAGCTGCATTGCCAACATCACACCCCAAAATTGTCCTGACATCGCTGCCCGCATTGGCCGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR TCA 90 bp TTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGGACAATTTTGGGGTGTaGTGTTGGCAATGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LSGKFPMAPLLSSPHSHQDNFGV*CWQCSF
Trigger: GAAGCTGCATTGCCAACATCACACCCCAAAATTGTC...CTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR TCA 90 bp GGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCACCTCCCGGCCGCAGTTaGCACATGACTGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GHNLLITCPASFPWPLFSPPGRS*HMTALS
Trigger: GGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGG...TGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR TCA 90 bp TTCCGACAGCGCACAGGCAACTCGCTGTCATACACCGAAGGGTCCCAGTTGTACTGTCTGAGGTCTCCATaGCATCCTTCCCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: FRQRTGNSLSYTEGSQLYCLRSP*HPSPET
Trigger: AGTTTCTGGGGAAGGATGTCATGGAGACCTCAGACA...GTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGTGCGCTGTCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
CDS-3UTR GCA 90 bp TGTTTATTAACAGATAAGACAGGTATGTACACGTGGCATAGGGCACCCCAAGGGCTCCGCCTCGGAGTCTaGGTCCTCCTCCGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: CLLTDKTGMYTWHRAPQGLRLGV*VLLRVL
Trigger: GAGGACTCGGAGGAGGACGCAGACTCCGAGGCGGAG...CCCTTGGGGTGCCCTATGCCACGTGTACATACCTGTCTTATCTGTTAATAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp GCAGAACGTAGAGCAGTAGTTAACCTTGTGGCAGCCGGTACACTCACTCATGGCTACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AERRAVVNLVAAGTLTHGYQFSP*LIHRPR
Trigger: CCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTA...GCCATGAGTGAGTGTACCGGCTGCCACAAGGTTAACTACTGCTCTACGTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp TGTTGGCAATGCAGCTTCTGGAAACGGGGCAATCTGGCAGCTGTCCTGATAGCCTGCCAGCATAGCGGATaGTTCTCTTCCAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: CWQCSFWKRGNLAAVLIACQHSG*FSSSPC
Trigger: GCAAGGACTGGAAGAGAAGCATCCGCTATGCTGGCA...GGCTATCAGGACAGCTGCCAGATTGCCCCGTTTCCAGAAGCTGCATTGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000210062.2
ENSMUST00000210816.2
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp CATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGACAGTTGACACATGACTaGTCTTTCCTCTCTGTATCA +
Preference number: 4 (lower is better)
Translates to: HGPSSQQPPQSSEGLSLRQLTHD*SFLSVS
Trigger: TGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTG...TCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR CCA 90 bp GGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCGGTCCCAGTTGTACTTaGTACCACCTTTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GSRVMFLGESFFTGVVGSGPSCT*YHLSPG
Trigger: GCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACC...GCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CCA 90 bp CCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGGGGAATCCTTCTTCACTaGAGTTGTGGGCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: PTVIRGPKPAMASQQSSRGILLH*SCGQLI
Trigger: AATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCC...CCTTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR CCA 90 bp TGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTAAGCAGCCAGTGGCCTCTACAGTaGATGCTCTGTCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: WEGRTQTQQRIQQAALSSQWPLQ*MLCQRS
Trigger: TGACCTTTGACAGAGCATCCACTGTAGAGGCCACTG...GCTGCTTAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp CACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAGAGCTCGCCTGCTTaGCTTGTTCAAACAGCGTCT +
Preference number: 4 (lower is better)
Translates to: HLGGKGRRISEFEASLVYKSSPA*LVQTAS
Trigger: AGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTT...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
3UTR CAA 72 bp AGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTaGGTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAA +
Preference number: 4 (lower is better)
Translates to: SRVPHSESCQRS*VSGRSLFPRAQ
Trigger: TTGTGCCCTTGGAAACAAGCTCCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
CDS-3UTR TCA 90 bp AGTGCTCCAGAGGTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGGTGGTGGCCTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SAPEVVICPEGVTVKVVALPLML*RRYLQR
Trigger: CCTCTGCAGATAACGTCTTCACAACATCAGTGGCAA...GGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTACCTCTGGAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR TCA 90 bp AATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCGGTAGTGATCTGTCCTaGGGGTGTCACAGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: NRAQGTETTPWRVLGGHSGSDLS*GCHSEG
Trigger: ACCTTCACTGTGACACCCTCAGGACAGATCACTACC...GCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR TCA 90 bp CACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACGACAATTTTGGGGTGTaGTGTTGGCAATGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HLGGKGRRISEFEASLVYDNFGV*CWQCSF
Trigger: GAAGCTGCATTGCCAACATCACACCCCAAAATTGTC...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR TCA 90 bp TTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCCCAGCTCCGATGTTCTaGCATCTCCAGCCCACTGAC +
Preference number: 4 (lower is better)
Translates to: FQGHNLLITCPASFPWPLPAPMF*HLQPTD
Trigger: GTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGG...GAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR GCA 90 bp GGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCATTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GHNLLITCPASFPWPLFSFLLAR*QWGRRR
Trigger: TCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAA...TGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp ATTCTCTTTCTTGCGCCTTTTATAAGGGACGAAGAGCCTGACAGGGCCACTCAGTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ILFLAPFIRDEEPDRATQFLLAR*QWGRRR
Trigger: TCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAA...CTGAGTGGCCCTGTCAGGCTCTTCGTCCCTTATAAAAGGCGCAAGAAAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209397.2
CDS-3UTR GCA 90 bp GGCAGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGGCTGCTGGCTCTTCCTaGCATAGCTTCAAACTCAGT +
Preference number: 4 (lower is better)
Translates to: GRKQGDVLGGILLHWSCGAAGSS*HSFKLS
Trigger: ACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGC...CCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp GTGGCCTCTACAGTGGATGCTCTGTCAAAGGTCAGTGCTCCAGAGGTAGTGATCTGCCAGCATAGCGGATaGTTCTCTTCCAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: VASTVDALSKVSAPEVVICQHSG*FSSSPC
Trigger: GCAAGGACTGGAAGAGAAGCATCCGCTATGCTGGCA...GATCACTACCTCTGGAGCACTGACCTTTGACAGAGCATCCACTGTAGAGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000210062.2
ENSMUST00000210816.2
ENSMUST00000210830.2
CDS-3UTR GCA 90 bp AGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGTCTCTGGAAGGAGCTCTGTCAAAGGTCAGTaGTCCAGAGGTAGTGATCTG +
Preference number: 4 (lower is better)
Translates to: SRVPHSESCQRSLVSGRSSVKGQ*SRGSDL
Trigger: CAGATCACTACCTCTGGAGCACTGACCTTTGACAGA...GCTCCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR GCA 90 bp CAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTACTGCAAGAGCTCGCCTaGTTGGCTTGTTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: QKWEGRTQTQQRIQQAALLQELA*LACSNS
Trigger: GCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAG...TAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGGGAATCCTTCTTCACTaGAGTTGTGGGCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: GTRNRNDSMESVGRPQQLGILLH*SCGQLI
Trigger: AATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCC...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp CAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTACTGCCTCTTGCACTGTaGCTCCTGCAAAGACATCAC +
Preference number: 4 (lower is better)
Translates to: QKWEGRTQTQQRIQQAALLPLAL*LLQRHH
Trigger: GTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAG...TAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp ATGGTCTTTCCAGTCCTTGCGCTGGCAGAACGTAGAGCAGTAGTTAACCTTGTGACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: MVFPVLALAERRAVVNLVTCILA*VTAASL
Trigger: CAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGT...CACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGCAAGGACTGGAAAGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
CDS-3UTR CCA 90 bp TTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGACACTTTCTTCAACATaGACGTCATCAGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: LSGKFPMAPLLSSPHSHQTLSST*TSSAWT
Trigger: TGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGT...CTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CCA 90 bp CAATTTAATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCTGCCCCGCAGGTGCTTaGAGTGAGTCCACCTGCCTA +
Preference number: 4 (lower is better)
Translates to: QFNRAQGTETTPWRVLGGCPAGA*SESTCL
Trigger: TAGGCAGGTGGACTCACTCCAAGCACCTGCGGGGCA...GCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR TCA 90 bp TGTTTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCCAGCTCCGATGTTCTaGCATCTCCAGCCCACTGAC +
Preference number: 4 (lower is better)
Translates to: CFQGHNLLITCPASFPWPPAPMF*HLQPTD
Trigger: GTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGG...GGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR GCA 90 bp AGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGGCTGCTGGCTCTTCCTaGCATAGCTTCAAACTCAGT +
Preference number: 4 (lower is better)
Translates to: RKQGDVLGGILLHWSCGQAAGSS*HSFKLS
Trigger: ACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGC...CTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CCA 90 bp GAGAAGACATTTTCTGAAGAAATCCATGAAGAGCACTGCTGCCAGGCAAGCACAAGTGAGAGGTGCTGCTaGGCCCTTCAGCCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: EKTFSEEIHEEHCCQASTSERCC*ALQPSG
Trigger: ACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCACT...TGTGCTTGCCTGGCAGCAGTGCTCTTCATGGATTTCTTCAGAAAATGTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CCA 90 bp CAATTTAATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: QFNRAQGTETTPWRVLGGVPPFS*PGASGV
Trigger: TACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC...GCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR TCA 90 bp CAATTTAATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCAGCGTCTTCAGCTGCTaGGCTGTGTTGAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: QFNRAQGTETTPWRVLGGSVFSC*AVLSRE
Trigger: CTCCCTACTCAACACAGCTCAGCAGCTGAAGACGCT...GCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp CTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCACTCCGCCTCGGAGTCTaGGTCCTCCTCCGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LAQTATFSITLSSTWTSSLRLGV*VLLRVL
Trigger: GAGGACTCGGAGGAGGACGCAGACTCCGAGGCGGAG...TGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp AATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCTCTGTCAAAGGTCAGTaGTCCAGAGGTAGTGATCTG +
Preference number: 4 (lower is better)
Translates to: NRAQGTETTPWRVLGGHSSVKGQ*SRGSDL
Trigger: CAGATCACTACCTCTGGAGCACTGACCTTTGACAGA...GCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp CGTTCCTTGGTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RSLVSGRSLFPRAQSVNNTCILA*VTAASL
Trigger: CAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGT...GTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGACCAAGGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
3UTR CAA 72 bp GATGTTGTGAAGACGTTATCTGCAGAGGACCCCACGTaGGCCACAGTCACTGTGGTCACTTCTTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: DVVKTLSAEDPT*ATVTVVTSFSL
Trigger: AAGGGAGAAAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGCAGATAACGTCTTCACAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
CDS-3UTR TCA 90 bp CTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCTCATTCTCTTTCTTGCGTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LGGILLHWSCGQLILFLALPLML*RRYLQR
Trigger: CCTCTGCAGATAACGTCTTCACAACATCAGTGGCAA...CGCAAGAAAGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR TCA 90 bp TGTTTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCTGGCCACACACATGCTaGTGGTCTTTCCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: CFQGHNLLITCPASFPWPWPHTC*WSFQSS
Trigger: AGAGGACTGGAAAGACCATCAGCATGTGTGTGGCCA...GGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209600.2
CDS-3UTR GCA 90 bp GGGGTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGCACTGTGGTCACTTCTaGGAAGGCGGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GVGVLFTCLLTDKTGMYTHCGHF*EGGGGG
Trigger: GCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTG...CGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp GCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCAGCCTGGACAGTGTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ATFSITLSSTWTSSAWTVFLLAR*QWGRRR
Trigger: TCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAA...CACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp TTGGTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACTTGTCCTCACAGCAGCTTCCCTaGAAGAGCTCGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LVSGRSLFPRAQSVNNLSSQQLP*KSSPAW
Trigger: CCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGA...GGACAAGTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CCA 90 bp GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGGTACAACTATTAGTGTaGCTTTTTCAGTGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: GTRNRNDSMESVGRPQQLVQLLV*LFQCSG
Trigger: GCCTGAACACTGAAAAAGCCACACTAATAGTTGTAC...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp AGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCCAGTGGCCTCTACAGTaGATGCTCTGTCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RAQSVNNLSGKFPMAPLLQWPLQ*MLCQRS
Trigger: TGACCTTTGACAGAGCATCCACTGTAGAGGCCACTG...GAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR CCA 90 bp ATGGTCTTTCCAGTCCTTGCGCTGGCAGAACGTAGAGCAGTAGTTAACCTTGTGAAGAGCTCGCCTGCTTaGCTTGTTCAAACAGCGTCT +
Preference number: 4 (lower is better)
Translates to: MVFPVLALAERRAVVNLVKSSPA*LVQTAS
Trigger: AGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTT...CACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGCAAGGACTGGAAAGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
3UTR CAA 72 bp AGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACTaGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: RSLFPRAQSVNN*SGKFPMAPLLS
Trigger: GCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
ENSMUST00000210062.2
CDS-3UTR TCA 90 bp AGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCGGTAGTGATCTGTCCTaGGGGTGTCACAGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RSLFPRAQSVNNLSGKFPGSDLS*GCHSEG
Trigger: ACCTTCACTGTGACACCCTCAGGACAGATCACTACC...GGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR TCA 90 bp TTCTTTCTCCCTTTGCAAAGAAGCTGCAAGTCCCATAGGTCTAGGACACCTCCTCTTGTGTCCACTGTCTaGGGTCTCCATGACATCCTT +
Preference number: 4 (lower is better)
Translates to: FFLPLQRSCKSHRSRTPPLVSTV*GLHDIL
Trigger: AAGGATGTCATGGAGACCTCAGACAGTGGACACAAG...AGGAGGTGTCCTAGACCTATGGGACTTGCAGCTTCTTTGCAAAGGGAGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
CDS-3UTR GCA 90 bp GCCTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATAGGCTGTCACCGATCTaGAGGGCTGTCCTACCAGAC +
Preference number: 4 (lower is better)
Translates to: AWLKQQLFLSHFLQHGRHRLSPI*RAVLPD
Trigger: GTCTGGTAGGACAGCCCTGCAGATCGGTGACAGCCT...ATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp AATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCGCTCATTCTCTTTCTTaGGCCTTTTATAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: NRAQGTETTPWRVLGGHSAHSLS*AFYKGR
Trigger: TCGTCCCTTATAAAAGGCGCAAGAAAGAGAATGAGC...GCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp GAAGCCTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTTCACAGCAGCTTCCCTaGAAGAGCTCGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: EAWLKQQLFLSHFLQHGRSQQLP*KSSPAW
Trigger: CCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGA...ACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
CDS-3UTR GCA 90 bp GTCTTTCCAGTCCTTGCGCTGGCAGAACGTAGAGCAGTAGTTAACCTTGTGGCACTAACCTTTTGCCTGTaGCTTTTTATCCCTGATCGG +
Preference number: 4 (lower is better)
Translates to: VFPVLALAERRAVVNLVALTFCL*LFIPDR
Trigger: CCGATCAGGGATAAAAAGGCACAGGCAAAAGGTTAG...TGCCACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGCAAGGACTGGAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
CDS-3UTR CCA 90 bp ATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGAAAAGAGTGAGAGGTGCTGCTaGGCCCTTCAGCCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: MEFYSSLIYMKPCLKDEKSERCC*ALQPSG
Trigger: ACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCACT...CTTTTCGTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR TCA 90 bp ATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGAAAAGCCAGCTCCGATGTTCTaGCATCTCCAGCCCACTGAC +
Preference number: 4 (lower is better)
Translates to: MEFYSSLIYMKPCLKDEKPAPMF*HLQPTD
Trigger: GTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGG...CTTTTCGTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR TCA 90 bp CCTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCAGCGTCTTCAGCTGCTaGGCTGTGTTGAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: PGSNSNFFYHTFFNMDVISVFSC*AVLSRE
Trigger: CTCCCTACTCAACACAGCTCAGCAGCTGAAGACGCT...GATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
CDS-3UTR GCA 90 bp GGGGTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGGGGAGGCTGCACACCTaGCTCTTGCACTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GVGVLFTCLLTDKTGMYTGRLHT*LLHCGS
Trigger: GGAGCCACAGTGCAAGAGGCAGGTGTGCAGCCTCCC...CGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR GCA 90 bp CAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCAGCCTGGACAGCTGCAAGAGCTCGCCTaGTTGGCTTGTTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: QQLFLSHFLQHGRHQPGQLQELA*LACSNS
Trigger: GCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAG...CTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
CDS-3UTR CCA 90 bp CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LYMEFYSSLIYMKPCLKDTCILA*VTAASL
Trigger: CAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGT...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGTCACAGCAGCTTCCCTaGAAGAGCTCGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: NVMRFVLPSPILDYFVLESQQLP*KSSPAW
Trigger: CCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGA...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp TTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCGTACAACTATTAGTGTaGCTTTTTCAGTGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: FQGHNLLITCPASFPWPLVQLLV*LFQCSG
Trigger: GCCTGAACACTGAAAAAGCCACACTAATAGTTGTAC...GAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CCA 90 bp ACATTACCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTGGGTCACAGCAGGTACAACTATTAGTGTaGCTTTTTCAGTGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: TLPLSSLYQPAFSPGSQQVQLLV*LFQCSG
Trigger: GCCTGAACACTGAAAAAGCCACACTAATAGTTGTAC...CTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGGTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
CDS-3UTR CCA 90 bp CTGCTGAAATACACTAATCTTAAACAAAATGTTTCATTAGTGTCTGCTACCCTCGGGGTAGGAGGAGACTaGGGACCTGGAGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLKYTNLKQNVSLVSATLGVGGD*GPGVRG
Trigger: ACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCC...GAGGGTAGCAGACACTAATGAAACATTTTGTTTAAGATTAGTGTATTTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
CDS-3UTR TCA 90 bp AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGTGGCAGGAAGCAGGGTaGTGTTCTTGGGGGAATCCT +
Preference number: 4 (lower is better)
Translates to: NVMRFVLPSPILDYFVLEWQEAG*CSWGNP
Trigger: AGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCA...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR TCA 90 bp ATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGAAAAGGCCGCAGTTGACACATaGCTCTTTCCTCTCTGTATC +
Preference number: 4 (lower is better)
Translates to: MEFYSSLIYMKPCLKDEKAAVDT*LFPLCI
Trigger: GATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGC...CTTTTCGTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp GGGGTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGTACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GVGVLFTCLLTDKTGMYTYQFSP*LIHRPR
Trigger: CCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTA...CGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp ACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCAGCCTGGACACCGTGCCTAACCTTTTaGCTGTGCCTTTTTATCCCT +
Preference number: 4 (lower is better)
Translates to: TATFSITLSSTWTSSAWTPCLTF*LCLFIP
Trigger: AGGGATAAAAAGGCACAGGCAAAAGGTTAGGCACGG...TGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
CDS-3UTR GCA 90 bp CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGCTGCTGGCTCTTCCTaGCATAGCTTCAAACTCAGT +
Preference number: 4 (lower is better)
Translates to: LYMEFYSSLIYMKPCLKDAAGSS*HSFKLS
Trigger: ACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGC...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGGGTCCCAGTTGTACTTaGTACCACCTTTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NVMRFVLPSPILDYFVLEGPSCT*YHLSPG
Trigger: GCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACC...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CCA 90 bp GCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCAGCCTGGACAGTGGTACAACTATTAGTGTaGCTTTTTCAGTGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: ATFSITLSSTWTSSAWTVVQLLV*LFQCSG
Trigger: GCCTGAACACTGAAAAAGCCACACTAATAGTTGTAC...CACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000210062.2
CDS-3UTR GCA 90 bp GTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGTGGGCTGCTGGCTCTTCCTaGCATAGCTTCAAACTCAGT +
Preference number: 4 (lower is better)
Translates to: VGVLFTCLLTDKTGMYTWAAGSS*HSFKLS
Trigger: ACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGC...CCACGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR TCA 90 bp AGCCAGGGTTGTGTAGAAAAACCTTGTTTCAAACAAACAAACAAACAAACAAACTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SQGCVEKPCFKQTNKQTNLPLML*RRYLQR
Trigger: CCTCTGCAGATAACGTCTTCACAACATCAGTGGCAA...GTTTGTTTGTTTGTTTGTTTGTTTGAAACAAGGTTTTTCTACACAACCCTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR GCA 90 bp GGGGTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGGCTCATTCTCTTTCTTaGGCCTTTTATAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: GVGVLFTCLLTDKTGMYTAHSLS*AFYKGR
Trigger: TCGTCCCTTATAAAAGGCGCAAGAAAGAGAATGAGC...CGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR CCA 90 bp GTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGTGGACACTTTCTTCAACATaGACGTCATCAGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: VGVLFTCLLTDKTGMYTWTLSST*TSSAWT
Trigger: TGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGT...CCACGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
3UTR CAA 72 bp TTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTaGAGTGTGCACTTTGTAGATGACAATGTCATGTCA +
Preference number: 4 (lower is better)
Translates to: LFCPPQYLIISF*SVHFVDDNVMS
Trigger: TGACATGACATTGTCATCTACAAAGTGCACACTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS GCA 90 bp TGCGGCCGCGGCGGCCGCCGCCACCGCGGCAGCGGCCGCCACAGCTaGCGCCTCGGCCAGGCCCAGCTGTTTTGCCGCCGAGTCCGAGTC +
Preference number: 5 (lower is better)
Translates to: CGRGGRRHRGSGRHS*RLGQAQLFCRRVRV
Trigger: GACTCGGACTCGGCGGCAAAACAGCTGGGCCTGGCCGAGGCGGCAGCTGTGGCGGCCGCTGCCGCGGTGGCGGCGGCCGCCGCGGCCGCA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080553.9
ENSMUST00000209608.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS CCA 90 bp TTCCTCCTGCGAAGGCGGCGGCGGCGGCGGCGGCCTCATCGGGGCTaGGCAGAGCCTCGGTACCCATATCCATGTGCCCAGATTCGGCCG +
Preference number: 5 (lower is better)
Translates to: FLLRRRRRRRRPHRG*AEPRYPYPCAQIRP
Trigger: CGGCCGAATCTGGGCACATGGATATGGGTACCGAGGCTCTGCCCAGCCCCGATGAGGCCGCCGCCGCCGCCGCCGCCTTCGCAGGAGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
CDS GCA 90 bp GCGGCCTCATCGGGGCTGGGCAGAGCCTCGGTACCCATATCCATGTaGCCAGATTCGGCCGCCATCACCGCCACAGCGGTGACCCGCCGC +
Preference number: 5 (lower is better)
Translates to: AASSGLGRASVPISM*PDSAAITATAVTRR
Trigger: GCGGCGGGTCACCGCTGTGGCGGTGATGGCGGCCGAATCTGGGCACATGGATATGGGTACCGAGGCTCTGCCCAGCCCCGATGAGGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209608.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS GCA 90 bp ATCTGCAGAGGACCCCACGTTGGCCACAGTCACTGTGGTCACTTCTaGGAAGGCGGCGGCGGCGGCGGCGGCCTCATCGGGGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ICRGPHVGHSHCGHF*EGGGGGGGLIGAGQ
Trigger: CTGCCCAGCCCCGATGAGGCCGCCGCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGCAGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS CCA 90 bp TCACTTCTGCGAAGGCGGCGGCGGCGGCGGCGGCCTCATCGGGGCTaGGCAGAGCCTCGGTACCCATATCCATGTGCCCAGATTCGGCCG +
Preference number: 5 (lower is better)
Translates to: SLLRRRRRRRRPHRG*AEPRYPYPCAQIRP
Trigger: CGGCCGAATCTGGGCACATGGATATGGGTACCGAGGCTCTGCCCAGCCCCGATGAGGCCGCCGCCGCCGCCGCCGCCTTCGCAGAAGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS TCA 90 bp CCATATCCATGTGCCCAGATTCGGCCGCCATCACCGCCACAGCGGTaGCCCGCCGCGTCTCGCGCTCCGCCTCGGAGTCTGCGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PYPCAQIRPPSPPQR*PAASRAPPRSLRPP
Trigger: AGGAGGACGCAGACTCCGAGGCGGAGCGCGAGACGCGGCGGGTCACCGCTGTGGCGGTGATGGCGGCCGAATCTGGGCACATGGATATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209608.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS-3UTR CAA 90 bp GGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGGTGGGAGAGACAGCTTaGGTGGGGGTGGACGGTGGC +
Preference number: 5 (lower is better)
Translates to: GPSSQQPPQSSEGLSLRWVGETA*VGVDGG
Trigger: GCCACCGTCCACCCCCACCAAAGCTGTCTCTCCCAC...CCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CAA 90 bp CGTGATAGGCTGAGGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCCAGGCCCAGCTGTTTaGCCGCCGAGTCCGAGTCCT +
Preference number: 5 (lower is better)
Translates to: RDRLRALGCSRVPHSESCPGPAV*PPSPSP
Trigger: AGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTGG...GCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCCTCAGCCTATCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS TCA 90 bp GGCCCCGGCCACCTGAGCCGAGCCTACTCTTGTAGAGCGTGCCACTaGTGTTCCGACAGCGCACAGGCAACTCGCTGTCATACACCGAAG +
Preference number: 5 (lower is better)
Translates to: GPGHLSRAYSCRACH*CSDSAQATRCHTPK
Trigger: CTTCGGTGTATGACAGCGAGTTGCCTGTGCGCTGTCGGAACATCAGTGGCACGCTCTACAAGAGTAGGCTCGGCTCAGGTGGCCGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS-3UTR CAA 90 bp AATCTGGCAGCTGTCCTGATAGCCAGGGTAGTGGGGTTCAGGGTGGCCAACCCTCCAGGCCCAGCTGTTTaGCCGCCGAGTCCGAGTCCT +
Preference number: 5 (lower is better)
Translates to: NLAAVLIARVVGFRVANPPGPAV*PPSPSP
Trigger: AGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTGG...AGGGTTGGCCACCCTGAACCCCACTACCCTGGCTATCAGGACAGCTGCCAGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210830.2
CDS-3UTR CAA 90 bp GGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGGCTCGCCTGCTTGGCTaGTTCAAACAGCGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: GPWAVAECPILKAASVPWARLLG*FKQRLQ
Trigger: CTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGC...CCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CAA 90 bp CCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGCCTCCCGGCCGCAGTaGACACATGACTGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: PPQSSEGLSLRWLHSRAQASRPQ*THDCSF
Trigger: GAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGC...TTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS TCA 90 bp CTGCCTAGGCACCTATCCAGGACACTAGAGTGGGAAAGGCTGAGGTaGTGCAGGCATGTGAGCAGGCACGCTACCTTGCGCTGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: LPRHLSRTLEWERLR*CRHVSRHATLRWQN
Trigger: GTTCTGCCAGCGCAAGGTAGCGTGCCTGCTCACATGCCTGCATCACCTCAGCCTTTCCCACTCTAGTGTCCTGGATAGGTGCCTAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS GCA 90 bp CGAAGGGTCCCAGTTGTACTTGGTACCACCTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGACTGGGGACCAGGACATGTCCTGAT +
Preference number: 5 (lower is better)
Translates to: RRVPVVLGTTFLLAR*QWGRRRLGTRTCPD
Trigger: ATCAGGACATGTCCTGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209397.2
CDS CCA 90 bp GTACCACCTTTCTCCTGGCCAGGTGCCAGTGGGGTAGGAGGAGACTaGGGACCAGGACATGTCCTGATATCGATGCTGCGTTTGCCACTG +
Preference number: 5 (lower is better)
Translates to: VPPFSWPGASGVGGD*GPGHVLISMLRLPL
Trigger: CAGTGGCAAACGCAGCATCGATATCAGGACATGTCCTGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209397.2
CDS-3UTR CAA 90 bp GTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGGTGGTGGCCGCCGTGGCAGGAGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: VVICPEGVTVKVVAAVAGGSQLY*VPPFSW
Trigger: CCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCC...TCCTGCCACGGCGGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CAA 90 bp AACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGCCCCAACCCAGACCCTGCAAAGACATCACCTaGGGCTGGGCTCTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: NDSMESVGRPQQLPQPRPCKDIT*GWALRD
Trigger: ATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCA...GGGTCTGGGTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CAA 90 bp CCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGGCTGCACACCTGCCTCTaGCACTGTGGCTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: PTVIRGPKPAMASQQSSRLHTCL*HCGSCK
Trigger: TTTGCAGGAGCCACAGTGCAAGAGGCAGGTGTGCAG...CCTTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR CAA 90 bp GCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAGCTCGCCTGCTTGGCTaGTTCAAACAGCGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: APTVIRGPKPAMASQQSSARLLG*FKQRLQ
Trigger: CTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGC...TGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS TCA 90 bp GCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTGACACATaGCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTGGGTCAC +
Preference number: 5 (lower is better)
Translates to: AAGTLTHGLPAAVDT*LFPLCINLHSRLGH
Trigger: GTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS GCA 90 bp CCTGCCATAGCTTCAAACTCAGTTGGGCTGTACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGGCCACCTGAGCCGAGCCTACTCTTG +
Preference number: 5 (lower is better)
Translates to: PAIASNSVGLYQFSP*LIHRPRPPEPSLLL
Trigger: CAAGAGTAGGCTCGGCTCAGGTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTACAGCCCAACTGAGTTTGAAGCTATGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS CCA 90 bp CCAGTCCTTGCTGCTGGCTCTTCCTGCCATAGCTTCAAACTCAGTTaGGCTGTACCAGTTTTCTCCCTGCTTGATACACCGGCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: PVLAAGSSCHSFKLS*AVPVFSLLDTPAPA
Trigger: GGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTACAGCCCAACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGCAAGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS CCA 90 bp TCATACACCGAAGGGTCCCAGTTGTACTTGGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTAGGAGGAGACTGGGGACCAGGACAT +
Preference number: 5 (lower is better)
Translates to: SYTEGSQLYLVPPFS*PGASGVGGDWGPGH
Trigger: ATGTCCTGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209397.2
CDS-3UTR CAA 90 bp TCCAGGTACAGCCAGCTCCGATGTTCTGACATCTCCAGCCCACTGACCACGGTGGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SRYSQLRCSDISSPLTTVGSQLY*VPPFSW
Trigger: CCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCC...CACCGTGGTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGGCTGTACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CAA 90 bp TCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGTGCAAAGACATCACCTaGGGCTGGGCTCTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: SGKFPMAPLLSSPHSHQRCKDIT*GWALRD
Trigger: ATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCA...CCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS TCA 90 bp CCTTGTGGCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTaGCACATGACTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCT +
Preference number: 5 (lower is better)
Translates to: PCGSRYTHSWPPGRS*HMTLSSLYQPAFSP
Trigger: AGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGCCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS CCA 90 bp GTCCCAGTTGTACTTGGTACCACCTTTCTCCTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGGACCAGGACATGTCCTGATATCGAT +
Preference number: 5 (lower is better)
Translates to: VPVVLGTTFLLARCQ*GRRRLGTRTCPDID
Trigger: ATCGATATCAGGACATGTCCTGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209397.2
CDS-3UTR CAA 90 bp AGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCGTGGGAGAGACAGCTTaGGTGGGGGTGGACGGTGGC +
Preference number: 5 (lower is better)
Translates to: RAQSVNNLSGKFPMAPLLVGETA*VGVDGG
Trigger: GCCACCGTCCACCCCCACCAAAGCTGTCTCTCCCAC...GAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CAA 90 bp CACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACGCTCGCCTGCTTGGCTaGTTCAAACAGCGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: HLGGKGRRISEFEASLVYARLLG*FKQRLQ
Trigger: CTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGC...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CAA 90 bp TTCAGCCCAGTGGTCTCCACAATGCTCCCATCTGTGTGTACAACTATTAGTGTGCCAGGCCCAGCTGTTTaGCCGCCGAGTCCGAGTCCT +
Preference number: 5 (lower is better)
Translates to: FSPVVSTMLPSVCTTISVPGPAV*PPSPSP
Trigger: AGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTGG...CACACTAATAGTTGTACACACAGATGGGAGCATTGTGGAGACCACTGGGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
CDS-3UTR CAA 90 bp AACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTC +
Preference number: 5 (lower is better)
Translates to: NLSGKFPMAPLLSSPHSHTEGSQ*YLVPPF
Trigger: GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGT...ATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CAA 90 bp ACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGCAGGGTGATGTTCTaGGGGGAATCCTTCTTCACT +
Preference number: 5 (lower is better)
Translates to: TCPASFPWPLFSAAPTVISRVMF*GESFFT
Trigger: AGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCT...GATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000080553.9
CDS-3UTR CAA 90 bp AACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGCCCCAACCCAGACCCGATGTCAGGACAATTTaGGGGTGTGATGTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: NDSMESVGRPQQLPQPRPDVRTI*GCDVGN
Trigger: ATTGCCAACATCACACCCCAAAATTGTCCTGACATC...GGGTCTGGGTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CAA 90 bp ACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCGTGTTGAGTAGGGAGTaGACCATCTCTTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: TCPASFPWPLFSAAPTVIVLSRE*TISSRY
Trigger: GTACCTGGAAGAGATGGTCAACTCCCTACTCAACAC...GATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CAA 90 bp TGTTGGCAATGCAGCTTCTGGAAACGGGGCAATCTGGCAGCTGTCCTGATAGCCACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTC +
Preference number: 5 (lower is better)
Translates to: CWQCSFWKRGNLAAVLIATEGSQ*YLVPPF
Trigger: GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGT...GGCTATCAGGACAGCTGCCAGATTGCCCCGTTTCCAGAAGCTGCATTGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CAA 90 bp TCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGATGTCAGGACAATTTaGGGGTGTGATGTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: SGKFPMAPLLSSPHSHQRDVRTI*GCDVGN
Trigger: ATTGCCAACATCACACCCCAAAATTGTCCTGACATC...CCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS CCA 90 bp TTGACACATGACTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTGCAAGAGCTCGCCTGCTTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: LTHDSFLSVSTCILA*VTAASLQELACLAC
Trigger: ACAAGCCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CAA 90 bp TGTTTATTAACAGATAAGACAGGTATGTACACGTGGCATAGGGCACCCCAAGGGGCAGAGGACCCCACGTaGGCCACAGTCACTGTGGTC +
Preference number: 5 (lower is better)
Translates to: CLLTDKTGMYTWHRAPQGAEDPT*ATVTVV
Trigger: GACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGC...CCCTTGGGGTGCCCTATGCCACGTGTACATACCTGTCTTATCTGTTAATAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CAA 90 bp AGTGGCCTCTACAGTGGATGCTCTGTCAAAGGTCAGTGCTCCAGAGGTAGTGATGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SGLYSGCSVKGQCSRGSDGSQLY*VPPFSW
Trigger: CCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCC...ATCACTACCTCTGGAGCACTGACCTTTGACAGAGCATCCACTGTAGAGGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CAA 90 bp GCGCTGGCAGAACGTAGAGCAGTAGTTAACCTTGTGGCAGCCGGTACACTCACTGTGTTGAGTAGGGAGTaGACCATCTCTTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: ALAERRAVVNLVAAGTLTVLSRE*TISSRY
Trigger: GTACCTGGAAGAGATGGTCAACTCCCTACTCAACAC...AGTGAGTGTACCGGCTGCCACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
CDS TCA 90 bp CGCACCATCACCGTGCCTAACCTTTTGCCTGTGCCTTTTTATCCCTaGTCGGGTGTGTTCCTCTTTCCTCTCTGTATCAACCTGCATTCT +
Preference number: 5 (lower is better)
Translates to: RTITVPNLLPVPFYP*SGVFLFPLCINLHS
Trigger: AGAATGCAGGTTGATACAGAGAGGAAAGAGGAACACACCCGATCAGGGATAAAAAGGCACAGGCAAAAGGTTAGGCACGGTGATGGTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
CDS-3UTR CAA 90 bp CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACCCAGGCCCAGCTGTTTaGCCGCCGAGTCCGAGTCCT +
Preference number: 5 (lower is better)
Translates to: LYMEFYSSLIYMKPCLKDPGPAV*PPSPSP
Trigger: AGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTGG...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CAA 90 bp CGTTCCTTGGTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RSLVSGRSLFPRAQSVNNGSQLY*VPPFSW
Trigger: CCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCC...GTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGACCAAGGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CAA 90 bp GTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCTCATTCTCTTTCTTACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTC +
Preference number: 5 (lower is better)
Translates to: VLGGILLHWSCGQLILFLTEGSQ*YLVPPF
Trigger: GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGT...AAGAAAGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
CDS-3UTR CAA 90 bp TTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCGTGTTGAGTAGGGAGTaGACCATCTCTTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: FQGHNLLITCPASFPWPLVLSRE*TISSRY
Trigger: GTACCTGGAAGAGATGGTCAACTCCCTACTCAACAC...GAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CAA 90 bp CAATTTAATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCAGCAGGGTGATGTTCTaGGGGGAATCCTTCTTCACT +
Preference number: 5 (lower is better)
Translates to: QFNRAQGTETTPWRVLGGSRVMF*GESFFT
Trigger: AGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCT...GCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CAA 90 bp AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGGTGGGAGAGACAGCTTaGGTGGGGGTGGACGGTGGC +
Preference number: 5 (lower is better)
Translates to: NVMRFVLPSPILDYFVLEVGETA*VGVDGG
Trigger: GCCACCGTCCACCCCCACCAAAGCTGTCTCTCCCAC...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CAA 90 bp TCCTTGGTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACTTGACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTC +
Preference number: 5 (lower is better)
Translates to: SLVSGRSLFPRAQSVNNLTEGSQ*YLVPPF
Trigger: GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGT...CAAGTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGACCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
CDS-3UTR CAA 90 bp AGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCGATGTCAGGACAATTTaGGGGTGTGATGTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: RAQSVNNLSGKFPMAPLLDVRTI*GCDVGN
Trigger: ATTGCCAACATCACACCCCAAAATTGTCCTGACATC...GAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080553.9
ENSMUST00000209600.2
CDS-3UTR CAA 90 bp AGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCAGCCTGGACAGTGCTCGCCTGCTTGGCTaGTTCAAACAGCGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SNFFYHTFFNMDVISLDSARLLG*FKQRLQ
Trigger: CTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGC...ACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
CDS-3UTR CAA 90 bp CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACCTGCACACCTGCCTCTaGCACTGTGGCTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LYMEFYSSLIYMKPCLKDLHTCL*HCGSCK
Trigger: TTTGCAGGAGCCACAGTGCAAGAGGCAGGTGTGCAG...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CAA 90 bp GCCTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATACCGTGCCTAACCTTTaGCCTGTGCCTTTTTATCCC +
Preference number: 5 (lower is better)
Translates to: AWLKQQLFLSHFLQHGRHTVPNL*PVPFYP
Trigger: GGGATAAAAAGGCACAGGCAAAAGGTTAGGCACGGT...ATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
CDS-3UTR CAA 90 bp AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: NVMRFVLPSPILDYFVLEGSQLY*VPPFSW
Trigger: CCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCC...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CAA 90 bp AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTC +
Preference number: 5 (lower is better)
Translates to: NVMRFVLPSPILDYFVLETEGSQ*YLVPPF
Trigger: GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGT...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS-3UTR CAA 90 bp CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGTGTTGAGTAGGGAGTaGACCATCTCTTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LYMEFYSSLIYMKPCLKDVLSRE*TISSRY
Trigger: GTACCTGGAAGAGATGGTCAACTCCCTACTCAACAC...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS CCA 72 bp CGAAGGCGGCGGCGGCGGCGGCGGCCTCATCGGGGCTaGGCAGAGCCTCGGTACCCATATCCATGTGCCCAG +
Preference number: 6 (lower is better)
Translates to: RRRRRRRRPHRG*AEPRYPYPCAQ
Trigger: CTGGGCACATGGATATGGGTACCGAGGCTCTGCCCAGCCCCGATGAGGCCGCCGCCGCCGCCGCCGCCTTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209608.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS TCA 72 bp TGTGCCCAGATTCGGCCGCCATCACCGCCACAGCGGTaGCCCGCCGCGTCTCGCGCTCCGCCTCGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: CAQIRPPSPPQR*PAASRAPPRSL
Trigger: CAGACTCCGAGGCGGAGCGCGAGACGCGGCGGGTCACCGCTGTGGCGGTGATGGCGGCCGAATCTGGGCACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209608.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS GCA 72 bp GGACCCCACGTTGGCCACAGTCACTGTGGTCACTTCTaGGAAGGCGGCGGCGGCGGCGGCGGCCTCATCGGG +
Preference number: 6 (lower is better)
Translates to: GPHVGHSHCGHF*EGGGGGGGLIG
Trigger: CCCGATGAGGCCGCCGCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS GCA 72 bp GTCTCCATGACATCCTTCCCCAGAAACTCTTCCTCCTaGGAAGGCGGCGGCGGCGGCGGCGGCCTCATCGGG +
Preference number: 6 (lower is better)
Translates to: VSMTSFPRNSSS*EGGGGGGGLIG
Trigger: CCCGATGAGGCCGCCGCCGCCGCCGCCGCCTTCGCAGGAGGAAGAGTTTCTGGGGAAGGATGTCATGGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
CDS CCA 72 bp TATCTGCAGAGGACCCCACGTTGGCCACAGTCACTGTaGTCACTTCTGCGAAGGCGGCGGCGGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: YLQRTPRWPQSL*SLLRRRRRRRR
Trigger: CCGCCGCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGCAGATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080553.9
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS GCA 72 bp TCGGGGCTGGGCAGAGCCTCGGTACCCATATCCATGTaGCCAGATTCGGCCGCCATCACCGCCACAGCGGTG +
Preference number: 6 (lower is better)
Translates to: SGLGRASVPISM*PDSAAITATAV
Trigger: CACCGCTGTGGCGGTGATGGCGGCCGAATCTGGGCACATGGATATGGGTACCGAGGCTCTGCCCAGCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209608.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS GCA 72 bp CCTCGGAGTCTGCGTCCTCCTCCGAGTCCTCGTCTCTaGTTAACACCGGCTCCTCCGCCTCGCTTTCCGCTG +
Preference number: 6 (lower is better)
Translates to: PRSLRPPPSPRL*LTPAPPPRFPL
Trigger: CAGCGGAAAGCGAGGCGGAGGAGCCGGTGTTAAGCAGAGACGAGGACTCGGAGGAGGACGCAGACTCCGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209608.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS GCA 72 bp GCTTCAAACTCAGTTGGGCTGTACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGGCCACCTGAGCCGAGC +
Preference number: 6 (lower is better)
Translates to: ASNSVGLYQFSP*LIHRPRPPEPS
Trigger: GCTCGGCTCAGGTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTACAGCCCAACTGAGTTTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS CCA 72 bp ATAACCCTGAAGGCAGCGTTCTGCCCCGCAGGTGCTTaGAGTGAGTCCACCTGCCTAGGCACCTATCCAGGA +
Preference number: 6 (lower is better)
Translates to: ITLKAAFCPAGA*SESTCLGTYPG
Trigger: TCCTGGATAGGTGCCTAGGCAGGTGGACTCACTCCAAGCACCTGCGGGGCAGAACGCTGCCTTCAGGGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS TCA 72 bp CACCTGAGCCGAGCCTACTCTTGTAGAGCGTGCCACTaGTGTTCCGACAGCGCACAGGCAACTCGCTGTCAT +
Preference number: 6 (lower is better)
Translates to: HLSRAYSCRACH*CSDSAQATRCH
Trigger: ATGACAGCGAGTTGCCTGTGCGCTGTCGGAACATCAGTGGCACGCTCTACAAGAGTAGGCTCGGCTCAGGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS CAA 72 bp TCAAACTCAGTTGGGCTGTACCAGTTTTCTCCCTGCTaGATACACCGGCCCCGGCCACCTGAGCCGAGCCTA +
Preference number: 6 (lower is better)
Translates to: SNSVGLYQFSPC*IHRPRPPEPSL
Trigger: TAGGCTCGGCTCAGGTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTACAGCCCAACTGAGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS CAA 90 bp ACCTTGTGGCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTaGACACATGACTCTTTCCTCTCTGTATCAACCTGCATTCTCGCC +
Preference number: 6 (lower is better)
Translates to: TLWQPVHSLMASRPQ*THDSFLSVSTCILA
Trigger: GGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGCCACAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS CCA 72 bp GACTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTGCAAGAGCTCGCCTGC +
Preference number: 6 (lower is better)
Translates to: DSFLSVSTCILA*VTAASLQELAC
Trigger: GCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS CAA 72 bp CAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTaGACACATGACTCTTTCCTCTCTGTATCAACCTGC +
Preference number: 6 (lower is better)
Translates to: QPVHSLMASRPQ*THDSFLSVSTC
Trigger: GCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS TCA 72 bp AGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTaGCACATGACTCTTTCCTCTCTGTATCAACCTGCA +
Preference number: 6 (lower is better)
Translates to: SRYTHSWPPGRS*HMTLSSLYQPA
Trigger: TGCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS TCA 72 bp ACACTCACTCATGGCCTCCCGGCCGCAGTTGACACATaGCTCTTTCCTCTCTGTATCAACCTGCATTCTCGC +
Preference number: 6 (lower is better)
Translates to: TLTHGLPAAVDT*LFPLCINLHSR
Trigger: GCGAGAATGCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211537.2
CDS GCA 72 bp GATCGGGTGTGTTCCTCTTTCCTCTCTGTATCAACCTaGATTCTCGCCTGGGTCACAGCAGCTTCCCTGCAA +
Preference number: 6 (lower is better)
Translates to: DRVCSSFLSVST*ILAWVTAASLQ
Trigger: TTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGGAACACACCCGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
CDS GCA 72 bp GTGTGCGCACCATCACCGTGCCTAACCTTTTGCCTGTaGCTTTTTATCCCTGATCGGGTGTGTTCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: VCAPSPCLTFCL*LFIPDRVCSSF
Trigger: GAAAGAGGAACACACCCGATCAGGGATAAAAAGGCACAGGCAAAAGGTTAGGCACGGTGATGGTGCGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2
CDS CCA 72 bp GCTGCTGGCTCTTCCTGCCATAGCTTCAAACTCAGTTaGGCTGTACCAGTTTTCTCCCTGCTTGATACACCG +
Preference number: 6 (lower is better)
Translates to: AAGSSCHSFKLS*AVPVFSLLDTP
Trigger: CGGTGTATCAAGCAGGGAGAAAACTGGTACAGCCCAACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080553.9
ENSMUST00000209397.2
ENSMUST00000210062.2
ENSMUST00000210830.2
ENSMUST00000211537.2
CDS TCA 72 bp ATCCTACAGTCTTGTGTCCACTGTCTGAGGTCTCCATaGCATCCTTCCCCAGAAACTCTTCCTCCTGCGAAG +
Preference number: 6 (lower is better)
Translates to: ILQSCVHCLRSP*HPSPETLPPAK
Trigger: CTTCGCAGGAGGAAGAGTTTCTGGGGAAGGATGTCATGGAGACCTCAGACAGTGGACACAAGACTGTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209608.2
CDS TCA 72 bp ACCGTGCCTAACCTTTTGCCTGTGCCTTTTTATCCCTaGTCGGGTGTGTTCCTCTTTCCTCTCTGTATCAAC +
Preference number: 6 (lower is better)
Translates to: TVPNLLPVPFYP*SGVFLFPLCIN
Trigger: GTTGATACAGAGAGGAAAGAGGAACACACCCGATCAGGGATAAAAAGGCACAGGCAAAAGGTTAGGCACGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211146.2