Pregenerated sensors for DEAF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058886Ensembl transcript IDs: ENSMUST00000080553.9, ENSMUST00000209397.2, ENSMUST00000209600.2, ENSMUST00000209608.2, ENSMUST00000210062.2, ENSMUST00000210816.2, ENSMUST00000210830.2, ENSMUST00000211146.2, ENSMUST00000211537.2
Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GTACCACCTTTCTCCTGGCCAGGTGCCAGTGGGGTAGGAGGAGACTaGGGACCTGGAGTGAGAGGTGCTGCTGGGCCCTTCAGCCCAGTG | + |
Preference number: 1 (lower is better) Translates to: VPPFSWPGASGVGGD*GPGVRGAAGPFSPV Trigger: CACTGGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR CCA 90 bp | CAGTGGGGTAGGAGGAGACTGGGGACCTGGAGTGAGAGGTGCTGCTaGGCCCTTCAGCCCAGTGGTCTCCACAATGCTCCCATCTGTGTG | + |
Preference number: 1 (lower is better) Translates to: QWGRRRLGTWSERCC*ALQPSGLHNAPICV Trigger: CACACAGATGGGAGCATTGTGGAGACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR GCA 90 bp | CGAAGGGTCCCAGTTGTACTTGGTACCACCTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGACTGGGGACCTGGAGTGAGAGGTGC | + |
Preference number: 1 (lower is better) Translates to: RRVPVVLGTTFLLAR*QWGRRRLGTWSERC Trigger: GCACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR CCA 90 bp | GTCCCAGTTGTACTTGGTACCACCTTTCTCCTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGGACCTGGAGTGAGAGGTGCTGCTGG | + |
Preference number: 1 (lower is better) Translates to: VPVVLGTTFLLARCQ*GRRRLGTWSERCCW Trigger: CCAGCAGCACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR CCA 90 bp | TCATACACCGAAGGGTCCCAGTTGTACTTGGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTAGGAGGAGACTGGGGACCTGGAGTG | + |
Preference number: 1 (lower is better) Translates to: SYTEGSQLYLVPPFS*PGASGVGGDWGPGV Trigger: CACTCCAGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR TCA 90 bp | GCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTGACACATaGCTGCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTGGGT | + |
Preference number: 1 (lower is better) Translates to: AAGTLTHGLPAAVDT*LLFPLCINLHSRLG Trigger: ACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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3UTR TCA 90 bp | CCTTGTGGCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTaGCACATGACTGTCTATGGTAGCCTGTCTGGCTTGAACTTGCTA | + |
Preference number: 1 (lower is better) Translates to: PCGSRYTHSWPPGRS*HMTVYGSLSGLNLL Trigger: TAGCAAGTTCAAGCCAGACAGGCTACCATAGACAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGCCACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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3UTR TCA 90 bp | CCTTGTGGCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTaGCACATGACTGCTCTTTCCTCTCTGTATCAACCTGCATTCTCG | + |
Preference number: 1 (lower is better) Translates to: PCGSRYTHSWPPGRS*HMTALSSLYQPAFS Trigger: CGAGAATGCAGGTTGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGCCACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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3UTR CCA 90 bp | ACCTGCCTCTTGCACTGTGGCTCCTGCAAAGACATCACCTTGGGCTaGGCTCTCAGAGATGACAGCAGTGGCCTCTACAGTGGATGCTCT | + |
Preference number: 1 (lower is better) Translates to: TCLLHCGSCKDITLG*ALRDDSSGLYSGCS Trigger: AGAGCATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210062.2 ENSMUST00000210816.2 ENSMUST00000210830.2 |
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3UTR CCA 90 bp | TGCACACCTGCCTCTTGCACTGTGGCTCCTGCAAAGACATCACCTTaGGCTGGGCTCTCAGAGATGACAGCAGTGGCCTCTACAGTGGAT | + |
Preference number: 1 (lower is better) Translates to: CTPASCTVAPAKTSP*AGLSEMTAVASTVD Trigger: ATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAGGTGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210062.2 ENSMUST00000210816.2 ENSMUST00000210830.2 |
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3UTR TCA 90 bp | CTGTGGCTCCTGCAAAGACATCACCTTGGGCTGGGCTCTCAGAGATaGCAGCAGTGGCCTCTACAGTGGATGCTCTGTCAAAGGTCAGTG | + |
Preference number: 1 (lower is better) Translates to: LWLLQRHHLGLGSQR*QQWPLQWMLCQRSV Trigger: CACTGACCTTTGACAGAGCATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210062.2 ENSMUST00000210816.2 ENSMUST00000210830.2 |
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3UTR TCA 90 bp | CACAGCATCCTCCATCGCCCACAGGAGGCAGGGCACTGCAGCGGCTaGTGGAAAACTGTGTTTATGTATCCGATCCGCACCAAGTTACAC | + |
Preference number: 1 (lower is better) Translates to: HSILHRPQEAGHCSG*WKTVFMYPIRTKLH Trigger: GTGTAACTTGGTGCGGATCGGATACATAAACACAGTTTTCCATCAGCCGCTGCAGTGCCCTGCCTCCTGTGGGCGATGGAGGATGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
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3UTR CCA 90 bp | CTCACGTGCTTTCATCTCACAGATCCAGCTGGGAGCCTGCAGAAATaGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCT | + |
Preference number: 1 (lower is better) Translates to: LTCFHLTDPAGSLQK*EGRTQTQQRIQQAA Trigger: AGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGATCTGTGAGATGAAAGCACGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR TCA 90 bp | GCAGCTCATTCTCTTTCTTGCGCCTTTTATAAGGGACGAAGAGCCTaGCAGGGCCACTTACTGCAGAGAGCAGACGTCCACAGGAGCCCT | + |
Preference number: 1 (lower is better) Translates to: AAHSLSCAFYKGRRA*QGHLLQRADVHRSP Trigger: AGGGCTCCTGTGGACGTCTGCTCTCTGCAGTAAGTGGCCCTGTCAGGCTCTTCGTCCCTTATAAAAGGCGCAAGAAAGAGAATGAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR GCA 90 bp | CTTGCGCCTTTTATAAGGGACGAAGAGCCTGACAGGGCCACTTACTaGAGAGAGCAGACGTCCACAGGAGCCCTCAGAATGGTAGAGAAG | + |
Preference number: 1 (lower is better) Translates to: LAPFIRDEEPDRATY*REQTSTGALRMVEK Trigger: CTTCTCTACCATTCTGAGGGCTCCTGTGGACGTCTGCTCTCTGCAGTAAGTGGCCCTGTCAGGCTCTTCGTCCCTTATAAAAGGCGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR GCA 90 bp | TCTCTGTATCAACCTGCATTCTCGCCTGGGTCACAGCAGCTTCCCTaGAAGAGCTCGCCTGCTTGGCTTGTTCAAACAGCGTCTTCAGCT | + |
Preference number: 1 (lower is better) Translates to: SLYQPAFSPGSQQLP*KSSPAWLVQTASSA Trigger: AGCTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR CCA 90 bp | ACACATGACTGCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTGCAAGAGCTCGCCTGCTTGGCTTGT | + |
Preference number: 1 (lower is better) Translates to: THDCSFLSVSTCILA*VTAASLQELACLAC Trigger: ACAAGCCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGCAGTCATGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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3UTR TCA 90 bp | CAAGAGCTCGCCTGCTTGGCTTGTTCAAACAGCGTCTTCAGCTGCTaGGCTGTGTTGAGTAGGGAGTTGACCATCTCTTCCAGGTACAGC | + |
Preference number: 1 (lower is better) Translates to: QELACLACSNSVFSC*AVLSRELTISSRYS Trigger: GCTGTACCTGGAAGAGATGGTCAACTCCCTACTCAACACAGCTCAGCAGCTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR TCA 90 bp | GGGGGCAGGGACTGGAGCTCTGGCTCAGGTGGCAGAGTGCCTGTCTaGTTTAAGGTTATGCTTGACTATATATGGAGTTCTACAGCAGCC | + |
Preference number: 1 (lower is better) Translates to: GGRDWSSGSGGRVPV*FKVMLDYIWSSTAA Trigger: GGCTGCTGTAGAACTCCATATATAGTCAAGCATAACCTTAAATCAGACAGGCACTCTGCCACCTGAGCCAGAGCTCCAGTCCCTGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR GCA 90 bp | CATAGATGCTCACGTGCTTTCATCTCACAGATCCAGCTGGGAGCCTaGAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGC | + |
Preference number: 1 (lower is better) Translates to: HRCSRAFISQIQLGA*RNGKEEPKPSRGSS Trigger: GCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGATCTGTGAGATGAAAGCACGTGAGCATCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR CCA 90 bp | TTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATaGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAG | + |
Preference number: 1 (lower is better) Translates to: FQGHNLLITCPASFP*PLFSAAPTVIRGPK Trigger: CTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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3UTR CCA 90 bp | CATGGGCACATAGATGCTCACGTGCTTTCATCTCACAGATCCAGCTaGGAGCCTGCAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAG | + |
Preference number: 1 (lower is better) Translates to: HGHIDAHVLSSHRSS*EPAEMGRKNPNPAE Trigger: CTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGATCTGTGAGATGAAAGCACGTGAGCATCTATGTGCCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR TCA 90 bp | ACAGGACATGTCCTGATATCGATGCTGCGTTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGGACCCCACGTTGGCCACAGTCACTG | + |
Preference number: 1 (lower is better) Translates to: TGHVLISMLRLPLML*RRYLQRTPRWPQSL Trigger: CAGTGACTGTGGCCAACGTGGGGTCCTCTGCAGATAACGTCTTCACAACATCAGTGGCAAACGCAGCATCGATATCAGGACATGTCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR CCA 90 bp | ACATGGACTCCTTGCCAGTGGACTTTGCCCAATGCAGGCCTTACATaGGCACATAGATGCTCACGTGCTTTCATCTCACAGATCCAGCTG | + |
Preference number: 1 (lower is better) Translates to: TWTPCQWTLPNAGLT*AHRCSRAFISQIQL Trigger: CAGCTGGATCTGTGAGATGAAAGCACGTGAGCATCTATGTGCCCATGTAAGGCCTGCATTGGGCAAAGTCCACTGGCAAGGAGTCCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR CCA 90 bp | AGAAGCAATCAATTTAATAGGGCACAAGGAACAGAAACGACTCCATaGAGAGTGTTGGGAGGCCACAGCAGCTGCCCCAACCCAGACCCA | + |
Preference number: 1 (lower is better) Translates to: RSNQFNRAQGTETTP*RVLGGHSSCPNPDP Trigger: TGGGTCTGGGTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTGATTGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR CCA 90 bp | CGTGGCAGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTaGAGTTGTGGGCAGCTCATTCTCTTTCTTGCGCCTTTTATAAGG | + |
Preference number: 1 (lower is better) Translates to: RGRKQGDVLGGILLH*SCGQLILFLAPFIR Trigger: CCTTATAAAAGGCGCAAGAAAGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR GCA 90 bp | GGCCACAGTCACTGTGGTCACTTCTTTCTCCCTTTGCAAAGAAGCTaGAAGTCCCATAGGTCTAGGACACCTCCTTGTCGATCAAGACAT | + |
Preference number: 1 (lower is better) Translates to: GHSHCGHFFLPLQRS*KSHRSRTPPCRSRH Trigger: ATGTCTTGATCGACAAGGAGGTGTCCTAGACCTATGGGACTTGCAGCTTCTTTGCAAAGGGAGAAAGAAGTGACCACAGTGACTGTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR CCA 90 bp | AGCCTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATaGACGTCATCAGCCTGGACAGTGACAGACGCTGACTGGCCACAC | + |
Preference number: 1 (lower is better) Translates to: SLAQTATFSITLSST*TSSAWTVTDADWPH Trigger: GTGTGGCCAGTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000211146.2 |
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3UTR TCA 90 bp | TTTCTATCACACTTTCTTCAACATGGACGTCATCAGCCTGGACAGTaGCAGACGCTGACTGGCCACACACATGCTGATGGTCTTTCCAGT | + |
Preference number: 1 (lower is better) Translates to: FLSHFLQHGRHQPGQ*QTLTGHTHADGLSS Trigger: ACTGGAAAGACCATCAGCATGTGTGTGGCCAGTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000211146.2 |
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3UTR GCA 90 bp | ACAACTATTAGTGTGGCTTTTTCAGTGTTCAGGCTGTCACCGATCTaGAGGGCTGTCCTACCAGACAGGACATGTCCTGATATCGATGCT | + |
Preference number: 1 (lower is better) Translates to: TTISVAFSVFRLSPI*RAVLPDRTCPDIDA Trigger: AGCATCGATATCAGGACATGTCCTGTCTGGTAGGACAGCCCTGCAGATCGGTGACAGCCTGAACACTGAAAAAGCCACACTAATAGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR CCA 90 bp | GGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGGAGAAGCCTaGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGA | + |
Preference number: 1 (lower is better) Translates to: GLSLRWLHSRAQGEA*LKQQLFLSHFLQHG Trigger: TCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGCTTCTCCTTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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3UTR GCA 90 bp | GGAGCTCTGGCTCAGGTGGCAGAGTGCCTGTCTGATTTAAGGTTATaGTTGACTATATATGGAGTTCTACAGCAGCCTGATATATATGAA | + |
Preference number: 1 (lower is better) Translates to: GALAQVAECLSDLRL*LTIYGVLQQPDIYE Trigger: TTCATATATATCAGGCTGCTGTAGAACTCCATATATAGTCAAGCATAACCTTAAATCAGACAGGCACTCTGCCACCTGAGCCAGAGCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR-3UTR TCA 90 bp | TTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGCTGAGGGTGTCACAGTaGAGGTGGTGGCCGCCGTGG | + |
Preference number: 2 (lower is better) Translates to: LSGKFPMAPLLSSPHSHQLRVSQ*RWWPPW Trigger: CCACGGCGGCCACCACCTTCACTGTGACACCCTCAG...CTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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3UTR-3UTR CCA 90 bp | GGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGGCAAAGACATCACCTTaGGCTGGGCTCTCAGAGATG | + |
Preference number: 2 (lower is better) Translates to: GPSSQQPPQSSEGLSLRWAKTSP*AGLSEM Trigger: CATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGC...CCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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3UTR-3UTR CCA 90 bp | GTGAGAGGTGCTGCTGGGCCCTTCAGCCCAGTGGTCTCCACAATGCTCCCATCTCAGAGGACCCCACGTTaGCCACAGTCACTGTGGTCA | + |
Preference number: 2 (lower is better) Translates to: VRGAAGPFSPVVSTMLPSQRTPR*PQSLWS Trigger: TGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTG...AGATGGGAGCATTGTGGAGACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR CAA 90 bp | CGCACAGGCAACTCGCTGTCATACACCGAAGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGGCCAGGTGCCAGTGGGGTAGGAGGA | + |
Preference number: 2 (lower is better) Translates to: RTGNSLSYTEGSQLY*VPPFSWPGASGVGG Trigger: TCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR CAA 90 bp | CGACAGCGCACAGGCAACTCGCTGTCATACACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTCTCCTGGCCAGGTGCCAGTGGGGTA | + |
Preference number: 2 (lower is better) Translates to: RQRTGNSLSYTEGSQ*YLVPPFSWPGASGV Trigger: TACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGTGCGCTGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR-3UTR CCA 90 bp | GTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATaGCTTCACAGCAGAGCTCAA | + |
Preference number: 2 (lower is better) Translates to: VRQVSHGPSSQQPPQSSEGLSLR*LHSRAQ Trigger: TTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCC...CTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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3UTR-3UTR CCA 90 bp | TGGGGGTGGACGGTGGCACGGCCAATGCGGGCAGCGATGTCAGGACAATTTTGGCTGCCTCTTGCACTGTaGCTCCTGCAAAGACATCAC | + |
Preference number: 2 (lower is better) Translates to: WGWTVARPMRAAMSGQFWLPLAL*LLQRHH Trigger: GTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAG...CCAAAATTGTCCTGACATCGCTGCCCGCATTGGCCGTGCCACCGTCCACCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR CAA 90 bp | CTGCACACCTGCCTCTTGCACTGTGGCTCCTGCAAAGACATCACCTaGGGCTGGGCTCTCAGAGATGACAGCAGTGGCCTCTACAGTGGA | + |
Preference number: 2 (lower is better) Translates to: LHTCLLHCGSCKDIT*GWALRDDSSGLYSG Trigger: TCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAGGTGTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210062.2 ENSMUST00000210816.2 ENSMUST00000210830.2 |
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3UTR-3UTR GCA 90 bp | TGGAAACGGGGCAATCTGGCAGCTGTCCTGATAGCCAGGGTAGTGGGGTTCAGGGACAGGGCCACTTACTaGAGAGAGCAGACGTCCACA | + |
Preference number: 2 (lower is better) Translates to: WKRGNLAAVLIARVVGFRDRATY*REQTST Trigger: TGTGGACGTCTGCTCTCTGCAGTAAGTGGCCCTGTC...CCTGAACCCCACTACCCTGGCTATCAGGACAGCTGCCAGATTGCCCCGTTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR-3UTR GCA 90 bp | CTGCCTCTTGCACTGTGGCTCCTGCAAAGACATCACCTTGGGCTGGGCTCTCAGGACAGGGCCACTTACTaGAGAGAGCAGACGTCCACA | + |
Preference number: 2 (lower is better) Translates to: LPLALWLLQRHHLGLGSQDRATY*REQTST Trigger: TGTGGACGTCTGCTCTCTGCAGTAAGTGGCCCTGTC...CTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR-3UTR GCA 90 bp | TGTTCCGACAGCGCACAGGCAACTCGCTGTCATACACCGAAGGGTCCCAGTTGTTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGA | + |
Preference number: 2 (lower is better) Translates to: CSDSAQATRCHTPKGPSCFLLAR*QWGRRR Trigger: TCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAA...ACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGTGCGCTGTCGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR-3UTR CCA 90 bp | ACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCGGCCTAAGCCTGCGATaGCTTCACAGCAGAGCTCAA | + |
Preference number: 2 (lower is better) Translates to: TCPASFPWPLFSAAPTVIGLSLR*LHSRAQ Trigger: TTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCC...GATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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3UTR-3UTR CCA 90 bp | TTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGGCTGCCAGCGTTCCTTaGTCTCTGGAAGGAGCTTGT | + |
Preference number: 2 (lower is better) Translates to: LSGKFPMAPLLSSPHSHQAASVP*SLEGAC Trigger: ACAAGCTCCTTCCAGAGACCAAGGAACGCTGGCAGC...CTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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3UTR CAA 90 bp | ACAGTGAAGGTGGTGGCCGCCGTGGCAGGAAGCAGGGTGATGTTCTaGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCTCATTCTCT | + |
Preference number: 2 (lower is better) Translates to: TVKVVAAVAGSRVMF*GESFFTGVVGSSFS Trigger: AGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCACGGCGGCCACCACCTTCACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
||
3UTR-3UTR TCA 90 bp | CTGCCTCTTGCACTGTGGCTCCTGCAAAGACATCACCTTGGGCTGGGCTCTCAGTGGCCACACACATGCTaGTGGTCTTTCCAGTCCTTG | + |
Preference number: 2 (lower is better) Translates to: LPLALWLLQRHHLGLGSQWPHTC*WSFQSL Trigger: CAAGGACTGGAAAGACCATCAGCATGTGTGTGGCCA...CTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
||
3UTR-3UTR CCA 90 bp | TCGCTGTCATACACCGAAGGGTCCCAGTTGTACTTGGTACCACCTTTCTCCTGGGGGGTAGGAGGAGACTaGGGACCTGGAGTGAGAGGT | + |
Preference number: 2 (lower is better) Translates to: SLSYTEGSQLYLVPPFSWGVGGD*GPGVRG Trigger: ACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCC...CCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
||
3UTR CAA 90 bp | ACCTTGTGGCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTaGACACATGACTGCTCTTTCCTCTCTGTATCAACCTGCATTCTC | + |
Preference number: 2 (lower is better) Translates to: TLWQPVHSLMASRPQ*THDCSFLSVSTCIL Trigger: GAGAATGCAGGTTGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGCCACAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
||
3UTR-3UTR TCA 90 bp | TTGGGGTGTGATGTTGGCAATGCAGCTTCTGGAAACGGGGCAATCTGGCAGCTGCAGAGTGCCCCATTCTaGAAGCTGCCAGCGTTCCTT | + |
Preference number: 2 (lower is better) Translates to: LGCDVGNAASGNGAIWQLQSAPF*KLPAFL Trigger: AAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTG...CAGCTGCCAGATTGCCCCGTTTCCAGAAGCTGCATTGCCAACATCACACCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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3UTR-3UTR TCA 90 bp | TTTCCAGTCCTTGCGCTGGCAGAACGTAGAGCAGTAGTTAACCTTGTGGCAGCCCCTCCCGGCCGCAGTTaGCACATGACTGTCTATGGT | + |
Preference number: 2 (lower is better) Translates to: FPVLALAERRAVVNLVAAPPGRS*HMTVYG Trigger: ACCATAGACAGTCATGTGTCAACTGCGGCCGGGAGG...GGCTGCCACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGCAAGGACTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
||
3UTR-3UTR TCA 90 bp | GATGCTCTGTCAAAGGTCAGTGCTCCAGAGGTAGTGATCTGTCCTGAGGGTGTCAAGGGACGAAGAGCCTaGCAGGGCCACTCAGAGTCA | + |
Preference number: 2 (lower is better) Translates to: DALSKVSAPEVVICPEGVKGRRA*QGHSES Trigger: TGACTCTGAGTGGCCCTGTCAGGCTCTTCGTCCCTT...GACACCCTCAGGACAGATCACTACCTCTGGAGCACTGACCTTTGACAGAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209397.2 |
||
3UTR-3UTR GCA 90 bp | CCTGATAGCCAGGGTAGTGGGGTTCAGGGTGGCCAACCCTGCAGGGAGGCTGCAGCTCATTCTCTTTCTTaGGCCTTTTATAAGGGACGA | + |
Preference number: 2 (lower is better) Translates to: PDSQGSGVQGGQPCREAAAHSLS*AFYKGR Trigger: TCGTCCCTTATAAAAGGCGCAAGAAAGAGAATGAGC...TGCAGCCTCCCTGCAGGGTTGGCCACCCTGAACCCCACTACCCTGGCTATCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
||
3UTR-3UTR GCA 90 bp | TCTTCCAGGTACAGCCAGCTCCGATGTTCTGACATCTCCAGCCCACTGACCACGGGCCTCTACAGTGGATaGTCTGTCAAAGGTCAGTGC | + |
Preference number: 2 (lower is better) Translates to: SSRYSQLRCSDISSPLTTGLYSG*SVKGQC Trigger: GCACTGACCTTTGACAGAGCATCCACTGTAGAGGCC...CGTGGTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGGCTGTACCTGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR-3UTR CCA 90 bp | GGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCTCATTCTCCCGGCAAGTTTCCCATaGCCCCTCTTCTCAGCAGCC | + |
Preference number: 2 (lower is better) Translates to: GDVLGGILLHWSCGQLILPASFP*PLFSAA Trigger: GGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGG...GAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
||
3UTR CAA 90 bp | CAATTTAATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTaGGGAGGCCACAGCAGCTGCCCCAACCCAGACCCAGCTTCATGG | + |
Preference number: 2 (lower is better) Translates to: QFNRAQGTETTPWRV*GGHSSCPNPDPASW Trigger: CCATGAAGCTGGGTCTGGGTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR-3UTR CCA 90 bp | TTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCCCGGCAAGTTTCCCATaGCCCCTCTTCTCAGCAGCC | + |
Preference number: 2 (lower is better) Translates to: FQGHNLLITCPASFPWPLPASFP*PLFSAA Trigger: GGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGG...GAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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3UTR-3UTR CCA 90 bp | AATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCGAGGCCCTCAGAACATaGACTCCTTGCCAGTGGACT | + |
Preference number: 2 (lower is better) Translates to: NRAQGTETTPWRVLGGHSEALRT*TPCQWT Trigger: AGTCCACTGGCAAGGAGTCCATGTTCTGAGGGCCTC...GCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR CAA 90 bp | GTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACTaGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCAC | + |
Preference number: 2 (lower is better) Translates to: VSGRSLFPRAQSVNN*SGKFPMAPLLSSPH Trigger: GTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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3UTR CAA 90 bp | GGACCCCACGTTGGCCACAGTCACTGTGGTCACTTCTTTCTCCCTTaGCAAAGAAGCTGCAAGTCCCATAGGTCTAGGACACCTCCTTGT | + |
Preference number: 2 (lower is better) Translates to: GPHVGHSHCGHFFLP*QRSCKSHRSRTPPC Trigger: ACAAGGAGGTGTCCTAGACCTATGGGACTTGCAGCTTCTTTGCAAAGGGAGAAAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR-3UTR TCA 90 bp | TTCCGACAGCGCACAGGCAACTCGCTGTCATACACCGAAGGGTCCCAGTTGTACTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGG | + |
Preference number: 2 (lower is better) Translates to: FRQRTGNSLSYTEGSQLYLPLML*RRYLQR Trigger: CCTCTGCAGATAACGTCTTCACAACATCAGTGGCAA...GTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGTGCGCTGTCGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR-3UTR CCA 90 bp | GGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCTCATTCTCGGCCTAAGCCTGCGATaGCTTCACAGCAGAGCTCAA | + |
Preference number: 2 (lower is better) Translates to: GDVLGGILLHWSCGQLILGLSLR*LHSRAQ Trigger: TTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCC...GAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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3UTR-3UTR CCA 90 bp | TCAAAGGTCAGTGCTCCAGAGGTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGTGGACGTCATCAGCCTaGACAGTGACAGACGCTGAC | + |
Preference number: 2 (lower is better) Translates to: SKVSAPEVVICPEGVTVKWTSSA*TVTDAD Trigger: GTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCA...CTTCACTGTGACACCCTCAGGACAGATCACTACCTCTGGAGCACTGACCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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3UTR-3UTR CCA 90 bp | TGCAGAGGACCCCACGTTGGCCACAGTCACTGTGGTCACTTCTTTCTCCCTTTGTTGTCGATCAAGACATaGCAGACTCCAGCCTCATCC | + |
Preference number: 2 (lower is better) Translates to: CRGPHVGHSHCGHFFLPLLSIKT*QTPASS Trigger: GGATGAGGCTGGAGTCTGCCATGTCTTGATCGACAA...CAAAGGGAGAAAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR-3UTR CCA 90 bp | ATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGAAAAGGCCAGGCGGCGGCGGTaGTGGTGGCAGCTCATGCCT | + |
Preference number: 2 (lower is better) Translates to: MEFYSSLIYMKPCLKDEKARRRR*WWQLMP Trigger: AGGCATGAGCTGCCACCACCACCGCCGCCGCCTGGC...CTTTTCGTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR-3UTR GCA 90 bp | AGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCTGGGCTGTAGCAGAGTaGCCCATTCTGAAAGCTGCC | + |
Preference number: 2 (lower is better) Translates to: RAQSVNNLSGKFPMAPLLWAVAE*PILKAA Trigger: GGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCA...GAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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3UTR-3UTR CCA 90 bp | CCAGTCCTTGCGCTGGCAGAACGTAGAGCAGTAGTTAACCTTGTGGCAGCCGGTACACTTTCTTCAACATaGACGTCATCAGCCTGGACA | + |
Preference number: 2 (lower is better) Translates to: PVLALAERRAVVNLVAAGTLSST*TSSAWT Trigger: TGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGT...ACCGGCTGCCACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGCAAGGACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000211146.2 |
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3UTR-3UTR GCA 90 bp | GCCCTGGTGTTGAGACGCTACAGGAAAACATGGTGGTCACAAGGTCACAGCATCTCTGTCAAAGGTCAGTaGTCCAGAGGTAGTGATCTG | + |
Preference number: 2 (lower is better) Translates to: ALVLRRYRKTWWSQGHSISVKGQ*SRGSDL Trigger: CAGATCACTACCTCTGGAGCACTGACCTTTGACAGA...GATGCTGTGACCTTGTGACCACCATGTTTTCCTGTAGCGTCTCAACACCAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
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3UTR-3UTR GCA 90 bp | GGCAACTCGCTGTCATACACCGAAGGGTCCCAGTTGTACTTGGTACCACCTTTCCCTTTGCAAAGAAGCTaGAAGTCCCATAGGTCTAGG | + |
Preference number: 2 (lower is better) Translates to: GNSLSYTEGSQLYLVPPFPLQRS*KSHRSR Trigger: CCTAGACCTATGGGACTTGCAGCTTCTTTGCAAAGG...GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR-3UTR TCA 90 bp | TGTTTATTAACAGATAAGACAGGTATGTACACGTGGCATAGGGCACCCCAAGGGCAGAGTGCCCCATTCTaGAAGCTGCCAGCGTTCCTT | + |
Preference number: 2 (lower is better) Translates to: CLLTDKTGMYTWHRAPQGQSAPF*KLPAFL Trigger: AAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTG...CCCTTGGGGTGCCCTATGCCACGTGTACATACCTGTCTTATCTGTTAATAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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3UTR CAA 90 bp | TTTGCCACTGATGTTGTGAAGACGTTATCTGCAGAGGACCCCACGTaGGCCACAGTCACTGTGGTCACTTCTTTCTCCCTTTGCAAAGAA | + |
Preference number: 2 (lower is better) Translates to: FATDVVKTLSAEDPT*ATVTVVTSFSLCKE Trigger: TTCTTTGCAAAGGGAGAAAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGCAGATAACGTCTTCACAACATCAGTGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR-3UTR TCA 90 bp | CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACTCTTGCAATGTTCTGTaGGGCCTGCTGGGCCAGGCC | + |
Preference number: 2 (lower is better) Translates to: LYMEFYSSLIYMKPCLKDSCNVL*GLLGQA Trigger: GGCCTGGCCCAGCAGGCCTCACAGAACATTGCAAGA...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR-3UTR TCA 90 bp | CAGAGAAAAGGAGCCAGCAGAAGGTTCGAGGGCAGTCCAGGCTACATAAAACCCAACAATGACACTGGATaGCCATTCTTGCAATGTTCT | + |
Preference number: 2 (lower is better) Translates to: QRKGASRRFEGSPGYIKPNNDTG*PFLQCS Trigger: AGAACATTGCAAGAATGGTCATCCAGTGTCATTGTT...GGGTTTTATGTAGCCTGGACTGCCCTCGAACCTTCTGCTGGCTCCTTTTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR-3UTR GCA 90 bp | GAGAAGCCTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACATCCATGAAGAGCACTaGTGCCAGGCAAGCACACAG | + |
Preference number: 2 (lower is better) Translates to: EKPGSNSNFFYHTFFNMDIHEEH*CQASTQ Trigger: CTGTGTGCTTGCCTGGCAGCAGTGCTCTTCATGGAT...GTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGCTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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3UTR CAA 90 bp | GCTCTGGCTCAGGTGGCAGAGTGCCTGTCTGATTTAAGGTTATGCTaGACTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACC | + |
Preference number: 2 (lower is better) Translates to: ALAQVAECLSDLRLC*TIYGVLQQPDIYET Trigger: GGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAGTCAAGCATAACCTTAAATCAGACAGGCACTCTGCCACCTGAGCCAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR-3UTR CCA 90 bp | CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGGGAGCCTGCAGAAATaGGAAGGAAGAACCCAAACC | + |
Preference number: 2 (lower is better) Translates to: LYMEFYSSLIYMKPCLKDGSLQK*EGRTQT Trigger: GGTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCC...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR-3UTR CCA 90 bp | AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGTCTCACAGATCCAGCTaGGAGCCTGCAGAAATGGGA | + |
Preference number: 2 (lower is better) Translates to: NVMRFVLPSPILDYFVLESHRSS*EPAEMG Trigger: TCCCATTTCTGCAGGCTCCCAGCTGGATCTGTGAGA...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR-3UTR GCA 90 bp | AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGATCCAGCTGGGAGCCTaGAGAAATGGGAAGGAAGAA | + |
Preference number: 2 (lower is better) Translates to: NVMRFVLPSPILDYFVLEIQLGA*RNGKEE Trigger: TTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGAT...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR-3UTR GCA 90 bp | AGCCAGGGTTGTGTAGAAAAACCTTGTTTCAAACAAACAAACAAACAAACAAACGTGGACTTTGCCCAATaGAGGCCTTACATGGGCACA | + |
Preference number: 2 (lower is better) Translates to: SQGCVEKPCFKQTNKQTNVDFAQ*RPYMGT Trigger: TGTGCCCATGTAAGGCCTGCATTGGGCAAAGTCCAC...GTTTGTTTGTTTGTTTGTTTGTTTGAAACAAGGTTTTTCTACACAACCCTGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR-3UTR CCA 90 bp | GGGGTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGGGAATCCTTCTTCACTaGAGTTGTGGGCAGCTCATT | + |
Preference number: 2 (lower is better) Translates to: GVGVLFTCLLTDKTGMYTGILLH*SCGQLI Trigger: AATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCC...CGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCACCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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3UTR GCA 72 bp | GATAGCCAGGGTAGTGGGGTTCAGGGTGGCCAACCCTaGAGGGAGGCTGCACACCTGCCTCTTGCACTGTGG | + |
Preference number: 3 (lower is better) Translates to: DSQGSGVQGGQP*REAAHLPLALW Trigger: CCACAGTGCAAGAGGCAGGTGTGCAGCCTCCCTGCAGGGTTGGCCACCCTGAACCCCACTACCCTGGCTATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210062.2 ENSMUST00000210816.2 ENSMUST00000210830.2 |
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3UTR CCA 72 bp | CACGGTGGGAGAGACAGCTTTGGTGGGGGTGGACGGTaGCACGGCCAATGCGGGCAGCGATGTCAGGACAAT | + |
Preference number: 3 (lower is better) Translates to: HGGRDSFGGGGR*HGQCGQRCQDN Trigger: ATTGTCCTGACATCGCTGCCCGCATTGGCCGTGCCACCGTCCACCCCCACCAAAGCTGTCTCTCCCACCGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR CCA 72 bp | AGGAGGAGACTGGGGACCTGGAGTGAGAGGTGCTGCTaGGCCCTTCAGCCCAGTGGTCTCCACAATGCTCCC | + |
Preference number: 3 (lower is better) Translates to: RRRLGTWSERCC*ALQPSGLHNAP Trigger: GGGAGCATTGTGGAGACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGTCCCCAGTCTCCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR-3UTR CAA 90 bp | GGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGAGCTGCCAGCGTTCCTaGGTCTCTGGAAGGAGCTTG | + |
Preference number: 3 (lower is better) Translates to: GPSSQQPPQSSEGLSLRWSCQRS*VSGRSL Trigger: CAAGCTCCTTCCAGAGACCAAGGAACGCTGGCAGCT...CCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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3UTR TCA 72 bp | GCAATGTTCTGTGAGGCCTGCTGGGCCAGGCCATGGTaGGAGGCCCTCAGAACATGGACTCCTTGCCAGTGG | + |
Preference number: 3 (lower is better) Translates to: AMFCEACWARPW*EALRTWTPCQW Trigger: CCACTGGCAAGGAGTCCATGTTCTGAGGGCCTCTCACCATGGCCTGGCCCAGCAGGCCTCACAGAACATTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR GCA 72 bp | ACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTaGCCCAACCCAGACCCAGCTTCATGGCACTGCCTA | + |
Preference number: 3 (lower is better) Translates to: TTPWRVLGGHSS*PNPDPASWHCL Trigger: TAGGCAGTGCCATGAAGCTGGGTCTGGGTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR GCA 72 bp | GGGAGGCTGCACACCTGCCTCTTGCACTGTGGCTCCTaGAAAGACATCACCTTGGGCTGGGCTCTCAGAGAT | + |
Preference number: 3 (lower is better) Translates to: GRLHTCLLHCGS*KDITLGWALRD Trigger: ATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAGGTGTGCAGCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210062.2 ENSMUST00000210816.2 ENSMUST00000210830.2 |
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3UTR CCA 72 bp | GAAGGGTCCCAGTTGTACTTGGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTAGGAGGAGACTGGGGA | + |
Preference number: 3 (lower is better) Translates to: EGSQLYLVPPFS*PGASGVGGDWG Trigger: TCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR-3UTR CAA 90 bp | GGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGGTCTCTGGAAGGAGCTaGTTTCCAAGGGCACAATCT | + |
Preference number: 3 (lower is better) Translates to: GPSSQQPPQSSEGLSLRWVSGRS*FPRAQS Trigger: AGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGAC...CCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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3UTR TCA 72 bp | GACCATCTCTTCCAGGTACAGCCAGCTCCGATGTTCTaGCATCTCCAGCCCACTGACCACGGTGGGAGAGAC | + |
Preference number: 3 (lower is better) Translates to: DHLFQVQPAPMF*HLQPTDHGGRD Trigger: GTCTCTCCCACCGTGGTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGGCTGTACCTGGAAGAGATGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR TCA 72 bp | CTCCATCGCCCACAGGAGGCAGGGCACTGCAGCGGCTaGTGGAAAACTGTGTTTATGTATCCGATCCGCACC | + |
Preference number: 3 (lower is better) Translates to: LHRPQEAGHCSG*WKTVFMYPIRT Trigger: GGTGCGGATCGGATACATAAACACAGTTTTCCATCAGCCGCTGCAGTGCCCTGCCTCCTGTGGGCGATGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
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3UTR GCA 72 bp | CAACCTGCATTCTCGCCTGGGTCACAGCAGCTTCCCTaGAAGAGCTCGCCTGCTTGGCTTGTTCAAACAGCG | + |
Preference number: 3 (lower is better) Translates to: QPAFSPGSQQLP*KSSPAWLVQTA Trigger: CGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
||
3UTR CCA 72 bp | ACTCGCTGTCATACACCGAAGGGTCCCAGTTGTACTTaGTACCACCTTTCTCCTGGCCAGGTGCCAGTGGGG | + |
Preference number: 3 (lower is better) Translates to: TRCHTPKGPSCT*YHLSPGQVPVG Trigger: CCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
||
3UTR-3UTR CAA 90 bp | TTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGTGCAAAGACATCACCTaGGGCTGGGCTCTCAGAGAT | + |
Preference number: 3 (lower is better) Translates to: LSGKFPMAPLLSSPHSHQCKDIT*GWALRD Trigger: ATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCA...CTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
||
3UTR GCA 72 bp | GCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTaGCAGCGTTCCTTGGTCTCTGGAAGGAGCTTGTTT | + |
Preference number: 3 (lower is better) Translates to: ALGCSRVPHSES*QRSLVSGRSLF Trigger: AAACAAGCTCCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
||
3UTR CCA 72 bp | ACCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTGCAAGAGCTCGCCTGC | + |
Preference number: 3 (lower is better) Translates to: TSFLSVSTCILA*VTAASLQELAC Trigger: GCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
||
3UTR CCA 72 bp | TGCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTGCAAGAGCTCGCCTGC | + |
Preference number: 3 (lower is better) Translates to: CSFLSVSTCILA*VTAASLQELAC Trigger: GCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
||
3UTR-3UTR CAA 90 bp | AATCTGGCAGCTGTCCTGATAGCCAGGGTAGTGGGGTTCAGGGTGGCCAACCCTGTCTCTGGAAGGAGCTaGTTTCCAAGGGCACAATCT | + |
Preference number: 3 (lower is better) Translates to: NLAAVLIARVVGFRVANPVSGRS*FPRAQS Trigger: AGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGAC...AGGGTTGGCCACCCTGAACCCCACTACCCTGGCTATCAGGACAGCTGCCAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
||
3UTR TCA 72 bp | AGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTaGCACATGACTGCTCTTTCCTCTCTGTATCAACCT | + |
Preference number: 3 (lower is better) Translates to: SRYTHSWPPGRS*HMTALSSLYQP Trigger: AGGTTGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
||
3UTR CCA 72 bp | GCACGGCCAATGCGGGCAGCGATGTCAGGACAATTTTaGGGTGTGATGTTGGCAATGCAGCTTCTGGAAACG | + |
Preference number: 3 (lower is better) Translates to: ARPMRAAMSGQF*GVMLAMQLLET Trigger: CGTTTCCAGAAGCTGCATTGCCAACATCACACCCCAAAATTGTCCTGACATCGCTGCCCGCATTGGCCGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
||
3UTR CCA 72 bp | CATTGGGCCCTGGTGTTGAGACGCTACAGGAAAACATaGTGGTCACAAGGTCACAGCATCCTCCATCGCCCA | + |
Preference number: 3 (lower is better) Translates to: HWALVLRRYRKT*WSQGHSILHRP Trigger: TGGGCGATGGAGGATGCTGTGACCTTGTGACCACCATGTTTTCCTGTAGCGTCTCAACACCAGGGCCCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
||
3UTR-3UTR CAA 90 bp | CCTCCATCGCCCACAGGAGGCAGGGCACTGCAGCGGCTGATGGAAAACTGTGTTGATGTCAGGACAATTTaGGGGTGTGATGTTGGCAAT | + |
Preference number: 3 (lower is better) Translates to: PPSPTGGRALQRLMENCVDVRTI*GCDVGN Trigger: ATTGCCAACATCACACCCCAAAATTGTCCTGACATC...AACACAGTTTTCCATCAGCCGCTGCAGTGCCCTGCCTCCTGTGGGCGATGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
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3UTR TCA 72 bp | CTGCAAAGACATCACCTTGGGCTGGGCTCTCAGAGATaGCAGCAGTGGCCTCTACAGTGGATGCTCTGTCAA | + |
Preference number: 3 (lower is better) Translates to: LQRHHLGLGSQR*QQWPLQWMLCQ Trigger: TTGACAGAGCATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210062.2 ENSMUST00000210816.2 ENSMUST00000210830.2 |
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3UTR TCA 72 bp | AACATGGACGTCATCAGCCTGGACAGTGACAGACGCTaGCTGGCCACACACATGCTGATGGTCTTTCCAGTC | + |
Preference number: 3 (lower is better) Translates to: NMDVISLDSDRR*LATHMLMVFPV Trigger: GACTGGAAAGACCATCAGCATGTGTGTGGCCAGTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000211146.2 |
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3UTR GCA 72 bp | TTTATAAGGGACGAAGAGCCTGACAGGGCCACTTACTaGAGAGAGCAGACGTCCACAGGAGCCCTCAGAATG | + |
Preference number: 3 (lower is better) Translates to: FIRDEEPDRATY*REQTSTGALRM Trigger: CATTCTGAGGGCTCCTGTGGACGTCTGCTCTCTGCAGTAAGTGGCCCTGTCAGGCTCTTCGTCCCTTATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR GCA 72 bp | GTGCTGCTGGGCCCTTCAGCCCAGTGGTCTCCACAATaGTCCCATCTGTGTGTACAACTATTAGTGTGGCTT | + |
Preference number: 3 (lower is better) Translates to: VLLGPSAQWSPQ*SHLCVQLLVWL Trigger: AAGCCACACTAATAGTTGTACACACAGATGGGAGCATTGTGGAGACCACTGGGCTGAAGGGCCCAGCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
||
3UTR GCA 72 bp | AGGCCCTCAGAACATGGACTCCTTGCCAGTGGACTTTaGCCAATGCAGGCCTTACATGGGCACATAGATGCT | + |
Preference number: 3 (lower is better) Translates to: RPSEHGLLASGL*PMQALHGHIDA Trigger: AGCATCTATGTGCCCATGTAAGGCCTGCATTGGGCAAAGTCCACTGGCAAGGAGTCCATGTTCTGAGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR CCA 72 bp | GCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTaGTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAAT | + |
Preference number: 3 (lower is better) Translates to: AECPILKAASVP*SLEGACFQGHN Trigger: ATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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3UTR-3UTR CAA 90 bp | GCGATGTCAGGACAATTTTGGGGTGTGATGTTGGCAATGCAGCTTCTGGAAACGCTGCACACCTGCCTCTaGCACTGTGGCTCCTGCAAA | + |
Preference number: 3 (lower is better) Translates to: AMSGQFWGVMLAMQLLETLHTCL*HCGSCK Trigger: TTTGCAGGAGCCACAGTGCAAGAGGCAGGTGTGCAG...CGTTTCCAGAAGCTGCATTGCCAACATCACACCCCAAAATTGTCCTGACATCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR TCA 72 bp | TCTCTTTCTTGCGCCTTTTATAAGGGACGAAGAGCCTaGCAGGGCCACTTACTGCAGAGAGCAGACGTCCAC | + |
Preference number: 3 (lower is better) Translates to: SLSCAFYKGRRA*QGHLLQRADVH Trigger: GTGGACGTCTGCTCTCTGCAGTAAGTGGCCCTGTCAGGCTCTTCGTCCCTTATAAAAGGCGCAAGAAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
||
3UTR TCA 72 bp | GCCTGCTTGGCTTGTTCAAACAGCGTCTTCAGCTGCTaGGCTGTGTTGAGTAGGGAGTTGACCATCTCTTCC | + |
Preference number: 3 (lower is better) Translates to: ACLACSNSVFSC*AVLSRELTISS Trigger: GGAAGAGATGGTCAACTCCCTACTCAACACAGCTCAGCAGCTGAAGACGCTGTTTGAACAAGCCAAGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR TCA 72 bp | GTCCTGATATCGATGCTGCGTTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGGACCCCACGTTGGCCA | + |
Preference number: 3 (lower is better) Translates to: VLISMLRLPLML*RRYLQRTPRWP Trigger: TGGCCAACGTGGGGTCCTCTGCAGATAACGTCTTCACAACATCAGTGGCAAACGCAGCATCGATATCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR GCA 72 bp | GCTCTCAGAGATGACAGCAGTGGCCTCTACAGTGGATaGTCTGTCAAAGGTCAGTGCTCCAGAGGTAGTGAT | + |
Preference number: 3 (lower is better) Translates to: ALRDDSSGLYSG*SVKGQCSRGSD Trigger: ATCACTACCTCTGGAGCACTGACCTTTGACAGAGCATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210062.2 ENSMUST00000210816.2 ENSMUST00000210830.2 |
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3UTR GCA 72 bp | AGTGTGGCTTTTTCAGTGTTCAGGCTGTCACCGATCTaGAGGGCTGTCCTACCAGACAGGACATGTCCTGAT | + |
Preference number: 3 (lower is better) Translates to: SVAFSVFRLSPI*RAVLPDRTCPD Trigger: ATCAGGACATGTCCTGTCTGGTAGGACAGCCCTGCAGATCGGTGACAGCCTGAACACTGAAAAAGCCACACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR CCA 72 bp | CCTTGCCAGTGGACTTTGCCCAATGCAGGCCTTACATaGGCACATAGATGCTCACGTGCTTTCATCTCACAG | + |
Preference number: 3 (lower is better) Translates to: PCQWTLPNAGLT*AHRCSRAFISQ Trigger: CTGTGAGATGAAAGCACGTGAGCATCTATGTGCCCATGTAAGGCCTGCATTGGGCAAAGTCCACTGGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
||
3UTR CCA 72 bp | CAATTTAATAGGGCACAAGGAACAGAAACGACTCCATaGAGAGTGTTGGGAGGCCACAGCAGCTGCCCCAAC | + |
Preference number: 3 (lower is better) Translates to: QFNRAQGTETTP*RVLGGHSSCPN Trigger: GTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR GCA 72 bp | GGGGCAGGGACTGGAGCTCTGGCTCAGGTGGCAGAGTaGCTGTCTGATTTAAGGTTATGCTTGACTATATAT | + |
Preference number: 3 (lower is better) Translates to: GAGTGALAQVAE*LSDLRLCLTIY Trigger: ATATATAGTCAAGCATAACCTTAAATCAGACAGGCACTCTGCCACCTGAGCCAGAGCTCCAGTCCCTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR CCA 72 bp | AAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTaGAGTTGTGGGCAGCTCATTCTCTTTCTTGCGCCT | + |
Preference number: 3 (lower is better) Translates to: KQGDVLGGILLH*SCGQLILFLAP Trigger: AGGCGCAAGAAAGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR CCA 72 bp | TCTATCACACTTTCTTCAACATGGACGTCATCAGCCTaGACAGTGACAGACGCTGACTGGCCACACACATGC | + |
Preference number: 3 (lower is better) Translates to: SITLSSTWTSSA*TVTDADWPHTC Trigger: GCATGTGTGTGGCCAGTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000211146.2 |
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3UTR-3UTR CAA 90 bp | AGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCGTCTCTGGAAGGAGCTaGTTTCCAAGGGCACAATCT | + |
Preference number: 3 (lower is better) Translates to: RAQSVNNLSGKFPMAPLLVSGRS*FPRAQS Trigger: AGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGAC...GAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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3UTR GCA 72 bp | CACTGTGGTCACTTCTTTCTCCCTTTGCAAAGAAGCTaGAAGTCCCATAGGTCTAGGACACCTCCTTGTCGA | + |
Preference number: 3 (lower is better) Translates to: HCGHFFLPLQRS*KSHRSRTPPCR Trigger: TCGACAAGGAGGTGTCCTAGACCTATGGGACTTGCAGCTTCTTTGCAAAGGGAGAAAGAAGTGACCACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR CCA 72 bp | ATAGATGCTCACGTGCTTTCATCTCACAGATCCAGCTaGGAGCCTGCAGAAATGGGAAGGAAGAACCCAAAC | + |
Preference number: 3 (lower is better) Translates to: IDAHVLSSHRSS*EPAEMGRKNPN Trigger: GTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGATCTGTGAGATGAAAGCACGTGAGCATCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR TCA 72 bp | GACTGGAGCTCTGGCTCAGGTGGCAGAGTGCCTGTCTaGTTTAAGGTTATGCTTGACTATATATGGAGTTCT | + |
Preference number: 3 (lower is better) Translates to: DWSSGSGGRVPV*FKVMLDYIWSS Trigger: AGAACTCCATATATAGTCAAGCATAACCTTAAATCAGACAGGCACTCTGCCACCTGAGCCAGAGCTCCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR GCA 72 bp | GCTCAGGTGGCAGAGTGCCTGTCTGATTTAAGGTTATaGTTGACTATATATGGAGTTCTACAGCAGCCTGAT | + |
Preference number: 3 (lower is better) Translates to: AQVAECLSDLRL*LTIYGVLQQPD Trigger: ATCAGGCTGCTGTAGAACTCCATATATAGTCAAGCATAACCTTAAATCAGACAGGCACTCTGCCACCTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR CCA 72 bp | CAAACAGCAACTTTTTCTATCACACTTTCTTCAACATaGACGTCATCAGCCTGGACAGTGACAGACGCTGAC | + |
Preference number: 3 (lower is better) Translates to: QTATFSITLSST*TSSAWTVTDAD Trigger: GTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000211146.2 |
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3UTR-3UTR CAA 90 bp | ATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGAAAAGCCAGGACAGCCAGGGTaGTGTAGAAAAACCTTGTTT | + |
Preference number: 3 (lower is better) Translates to: MEFYSSLIYMKPCLKDEKPGQPG*CRKTLF Trigger: AAACAAGGTTTTTCTACACAACCCTGGCTGTCCTGG...CTTTTCGTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR TCA 72 bp | AAAGTGCTCTTGGGAAGGGTAAAAGTGTTAAGCATATaGTGGTCTAAGTGTTCAACTGACAGCGTAGTAGTG | + |
Preference number: 3 (lower is better) Translates to: KVLLGRVKVLSI*WSKCSTDSVVV Trigger: CACTACTACGCTGTCAGTTGAACACTTAGACCATCATATGCTTAACACTTTTACCCTTCCCAAGAGCACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | GGAGAGACAGCTTTGGTGGGGGTGGACGGTGGCACGGCCAATGCGGGCAGCGATACCTGGAGTGAGAGGTaGTGCTGGGCCCTTCAGCCC | + |
Preference number: 4 (lower is better) Translates to: GETALVGVDGGTANAGSDTWSER*CWALQP Trigger: GGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGT...ATCGCTGCCCGCATTGGCCGTGCCACCGTCCACCCCCACCAAAGCTGTCTCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR TCA 90 bp | CATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGAACTGGGGACCTGGAGTaGGAGGTGCTGCTGGGCCCT | + |
Preference number: 4 (lower is better) Translates to: HGPSSQQPPQSSEGLSLRTGDLE*EVLLGP Trigger: AGGGCCCAGCAGCACCTCTCACTCCAGGTCCCCAGT...TCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | GGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCAGGCCCAGCTGTTTTaGCGCCGAGTCCGAGTCCTC | + |
Preference number: 4 (lower is better) Translates to: GPSSQQPPQSSEGLSLRWQAQLF*RRVRVL Trigger: GAGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTG...CCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR GCA 90 bp | GGTCACAAGGTCACAGCATCCTCCATCGCCCACAGGAGGCAGGGCACTGCAGCGACCTGGAGTGAGAGGTaGTGCTGGGCCCTTCAGCCC | + |
Preference number: 4 (lower is better) Translates to: GHKVTASSIAHRRQGTAATWSER*CWALQP Trigger: GGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGT...CGCTGCAGTGCCCTGCCTCCTGTGGGCGATGGAGGATGCTGTGACCTTGTGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | TGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGCAGGGTGGCCAACCCTaGAGGGAGGCTGCACACCTG | + |
Preference number: 4 (lower is better) Translates to: WPLFSAAPTVIRGPKPAMQGGQP*REAAHL Trigger: CAGGTGTGCAGCCTCCCTGCAGGGTTGGCCACCCTG...CATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR CCA 90 bp | TGGGGGTGGACGGTGGCACGGCCAATGCGGGCAGCGATGTCAGGACAATTTTGGCTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGG | + |
Preference number: 4 (lower is better) Translates to: WGWTVARPMRAAMSGQFWLARCQ*GRRRLG Trigger: CCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAG...CCAAAATTGTCCTGACATCGCTGCCCGCATTGGCCGTGCCACCGTCCACCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CCA 90 bp | GTGGCCAACCCTGCAGGGAGGCTGCACACCTGCCTCTTGCACTGTGGCTCCTGCGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTA | + |
Preference number: 4 (lower is better) Translates to: VANPAGRLHTCLLHCGSCVPPFS*PGASGV Trigger: TACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC...GCAGGAGCCACAGTGCAAGAGGCAGGTGTGCAGCCTCCCTGCAGGGTTGGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CCA 90 bp | CAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTACTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGG | + |
Preference number: 4 (lower is better) Translates to: QVSHGPSSQQPPQSSEGLLARCQ*GRRRLG Trigger: CCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAG...TAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CCA 90 bp | GTGGCCGCCGTGGCAGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTCTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGG | + |
Preference number: 4 (lower is better) Translates to: VAAVAGSRVMFLGESFFTLARCQ*GRRRLG Trigger: CCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAG...AGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCACGGCGGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR TCA 90 bp | CACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACCTGAGGGTGTCACAGTaGAGGTGGTGGCCGCCGTGG | + |
Preference number: 4 (lower is better) Translates to: HLGGKGRRISEFEASLVYLRVSQ*RWWPPW Trigger: CCACGGCGGCCACCACCTTCACTGTGACACCCTCAG...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | CCAGTTGTACTTGGTACCACCTTTCTCCTGGCCAGGTGCCAGTGGGGTAGGAGGCAGGCCCAGCTGTTTTaGCGCCGAGTCCGAGTCCTC | + |
Preference number: 4 (lower is better) Translates to: PVVLGTTFLLARCQWGRRQAQLF*RRVRVL Trigger: GAGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTG...CCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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CDS-3UTR GCA 90 bp | GTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCCGAGTCCTCGTCTCTaGTTAACACCGGCTCCTCCG | + |
Preference number: 4 (lower is better) Translates to: VSHGPSSQQPPQSSEGLSPSPRL*LTPAPP Trigger: CGGAGGAGCCGGTGTTAAGCAGAGACGAGGACTCGG...GCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGCTCCGCCTCGGAGTCTaGGTCCTCCTCCGAGTCCTC | + |
Preference number: 4 (lower is better) Translates to: GTRNRNDSMESVGRPQQLLRLGV*VLLRVL Trigger: GAGGACTCGGAGGAGGACGCAGACTCCGAGGCGGAG...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | CATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGAAGGCTGTCACCGATCTaGAGGGCTGTCCTACCAGAC | + |
Preference number: 4 (lower is better) Translates to: HGPSSQQPPQSSEGLSLRRLSPI*RAVLPD Trigger: GTCTGGTAGGACAGCCCTGCAGATCGGTGACAGCCT...TCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGCAGGGTGGCCAACCCTaGAGGGAGGCTGCACACCTG | + |
Preference number: 4 (lower is better) Translates to: GTRNRNDSMESVGRPQQLQGGQP*REAAHL Trigger: CAGGTGTGCAGCCTCCCTGCAGGGTTGGCCACCCTG...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGCGGTGGCACGGCCAATaGGGGCAGCGATGTCAGGAC | + |
Preference number: 4 (lower is better) Translates to: GTRNRNDSMESVGRPQQLRWHGQ*GQRCQD Trigger: GTCCTGACATCGCTGCCCGCATTGGCCGTGCCACCG...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | GGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGTGGCCACAGTCACTGTaGTCACTTCTGCGAAGGCGG | + |
Preference number: 4 (lower is better) Translates to: GPWAVAECPILKAASVPWWPQSL*SLLRRR Trigger: CCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCA...CCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CCA 90 bp | CACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACCTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGG | + |
Preference number: 4 (lower is better) Translates to: HLGGKGRRISEFEASLVYLARCQ*GRRRLG Trigger: CCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAG...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | GGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGTGGACGTCATCAGCCTaGACAGTGACAGACGCTGAC | + |
Preference number: 4 (lower is better) Translates to: GPSSQQPPQSSEGLSLRWWTSSA*TVTDAD Trigger: GTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCA...CCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CCA 90 bp | GAGGTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGGTGGTGGCCGCCGTGGCAGGGGTAGGAGGAGACTaGGGACCAGGACATGTCCTG | + |
Preference number: 4 (lower is better) Translates to: EVVICPEGVTVKVVAAVAGVGGD*GPGHVL Trigger: CAGGACATGTCCTGGTCCCCAGTCTCCTCCTACCCC...TGCCACGGCGGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209397.2 |
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CDS-3UTR TCA 90 bp | CAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGTTTTCTCCCTGCTTaGTACACCGGCCCCGGCCAC | + |
Preference number: 4 (lower is better) Translates to: QVSHGPSSQQPPQSSEGLSFLPA*YTGPGH Trigger: GTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACT...TAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR TCA 90 bp | AGGGCCACTCAGAGTCATGTCATCACAACAGGCGGCACAGGTACAGGAGGCAGCAGTTTTCTCCCTGCTTaGTACACCGGCCCCGGCCAC | + |
Preference number: 4 (lower is better) Translates to: RATQSHVITTGGTGTGGSSFLPA*YTGPGH Trigger: GTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACT...GCTGCCTCCTGTACCTGTGCCGCCTGTTGTGATGACATGACTCTGAGTGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209397.2 |
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CDS-3UTR GCA 90 bp | CCAGAGAAAAGGAGCCAGCAGAAGGTTCGAGGGCAGTCCAGGCTACATAAAACCCACTGTGGTCACTTCTaGGAAGGCGGCGGCGGCGGC | + |
Preference number: 4 (lower is better) Translates to: PEKRSQQKVRGQSRLHKTHCGHF*EGGGGG Trigger: GCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTG...GGTTTTATGTAGCCTGGACTGCCCTCGAACCTTCTGCTGGCTCCTTTTCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | AACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATACCTGGAGTGAGAGGTaGTGCTGGGCCCTTCAGCCC | + |
Preference number: 4 (lower is better) Translates to: NLSGKFPMAPLLSSPHSHTWSER*CWALQP Trigger: GGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGT...ATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | CACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACGGGAGGCTGCACACCTaGCTCTTGCACTGTGGCTCC | + |
Preference number: 4 (lower is better) Translates to: HLGGKGRRISEFEASLVYGRLHT*LLHCGS Trigger: GGAGCCACAGTGCAAGAGGCAGGTGTGCAGCCTCCC...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | ACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGGAGACGGTGGCACGGCCAATaGGGGCAGCGATGTCAGGAC | + |
Preference number: 4 (lower is better) Translates to: TVIRGPKPAMASQQSSRRRWHGQ*GQRCQD Trigger: GTCCTGACATCGCTGCCCGCATTGGCCGTGCCACCG...TCTCCTTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR GCA 90 bp | TCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGTCACAGCAGCTTCCCTaGAAGAGCTCGCCTGCTTGG | + |
Preference number: 4 (lower is better) Translates to: SGKFPMAPLLSSPHSHQRSQQLP*KSSPAW Trigger: CCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGA...CCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CCA 90 bp | CCTCCATCGCCCACAGGAGGCAGGGCACTGCAGCGGCTGATGGAAAACTGTGTTTGGCCACAGTCACTGTaGTCACTTCTGCGAAGGCGG | + |
Preference number: 4 (lower is better) Translates to: PPSPTGGRALQRLMENCVWPQSL*SLLRRR Trigger: CCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCA...AACACAGTTTTCCATCAGCCGCTGCAGTGCCCTGCCTCCTGTGGGCGATGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
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CDS-3UTR CCA 90 bp | TCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGCAGAGGACCCCACGTTaGCCACAGTCACTGTGGTCA | + |
Preference number: 4 (lower is better) Translates to: SGKFPMAPLLSSPHSHQRQRTPR*PQSLWS Trigger: TGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTG...CCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CCA 90 bp | TTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGTGAGAGGTGCTGCTaGGCCCTTCAGCCCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: LSGKFPMAPLLSSPHSHQSERCC*ALQPSG Trigger: ACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCACT...CTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CCA 90 bp | TGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAAGTGAGAGGTGCTGCTaGGCCCTTCAGCCCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: CPASFPWPLFSAAPTVIRSERCC*ALQPSG Trigger: ACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCACT...TCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CCA 90 bp | CAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAGGGGTAGGAGGAGACTaGGGACCTGGAGTGAGAGGT | + |
Preference number: 4 (lower is better) Translates to: QVSHGPSSQQPPQSSEGLGVGGD*GPGVRG Trigger: ACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCC...TAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CCA 90 bp | CCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGGGGGGTAGGAGGAGACTaGGGACCTGGAGTGAGAGGT | + |
Preference number: 4 (lower is better) Translates to: PTVIRGPKPAMASQQSSRGVGGD*GPGVRG Trigger: ACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCC...CCTTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CCA 90 bp | GAGGTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGGTGGTGGCCGCCGTGGCAGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTA | + |
Preference number: 4 (lower is better) Translates to: EVVICPEGVTVKVVAAVAVPPFS*PGASGV Trigger: TACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC...TGCCACGGCGGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CCA 90 bp | CGTGATAGGCTGAGGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTG | + |
Preference number: 4 (lower is better) Translates to: RDRLRALGCSRVPHSESCTCILA*VTAASL Trigger: CAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGT...GCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCCTCAGCCTATCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR TCA 90 bp | AGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGTCTCTGGAAGGAGCAGTTTTCTCCCTGCTTaGTACACCGGCCCCGGCCAC | + |
Preference number: 4 (lower is better) Translates to: SRVPHSESCQRSLVSGRSSFLPA*YTGPGH Trigger: GTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACT...GCTCCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR TCA 90 bp | TCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGAGCGTCTTCAGCTGCTaGGCTGTGTTGAGTAGGGAG | + |
Preference number: 4 (lower is better) Translates to: SGKFPMAPLLSSPHSHQRSVFSC*AVLSRE Trigger: CTCCCTACTCAACACAGCTCAGCAGCTGAAGACGCT...CCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR TCA 90 bp | TGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGTGGCCACACACATGCTaGTGGTCTTTCCAGTCCTTG | + |
Preference number: 4 (lower is better) Translates to: WPLFSAAPTVIRGPKPAMWPHTC*WSFQSL Trigger: CAAGGACTGGAAAGACCATCAGCATGTGTGTGGCCA...CATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR GCA 90 bp | CAGATCCAGCTGGGAGCCTGCAGAAATGGGAAGGAAGAACCCAAACCCAGCAGACAGGCCCAGCTGTTTTaGCGCCGAGTCCGAGTCCTC | + |
Preference number: 4 (lower is better) Translates to: QIQLGACRNGKEEPKPSRQAQLF*RRVRVL Trigger: GAGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTG...TCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGATCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | GAGGACCCCACGTTGGCCACAGTCACTGTGGTCACTTCTTTCTCCCTTTGCAAACTCCGCCTCGGAGTCTaGGTCCTCCTCCGAGTCCTC | + |
Preference number: 4 (lower is better) Translates to: EDPTLATVTVVTSFSLCKLRLGV*VLLRVL Trigger: GAGGACTCGGAGGAGGACGCAGACTCCGAGGCGGAG...TTTGCAAAGGGAGAAAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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CDS-3UTR GCA 90 bp | GGGCAGCTCATTCTCTTTCTTGCGCCTTTTATAAGGGACGAAGAGCCTGACAGGCACTGTGGTCACTTCTaGGAAGGCGGCGGCGGCGGC | + |
Preference number: 4 (lower is better) Translates to: GQLILFLAPFIRDEEPDRHCGHF*EGGGGG Trigger: GCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTG...CCTGTCAGGCTCTTCGTCCCTTATAAAAGGCGCAAGAAAGAGAATGAGCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | GAGGTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGGTGGTGGCCGCCGTGGCATACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGG | + |
Preference number: 4 (lower is better) Translates to: EVVICPEGVTVKVVAAVAYQFSP*LIHRPR Trigger: CCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTA...TGCCACGGCGGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | AACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGCCCCAACCCAGACCCTGCCAGCATAGCGGATaGTTCTCTTCCAGTCCTTGC | + |
Preference number: 4 (lower is better) Translates to: NDSMESVGRPQQLPQPRPCQHSG*FSSSPC Trigger: GCAAGGACTGGAAGAGAAGCATCCGCTATGCTGGCA...GGGTCTGGGTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | AGGCTGAGGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTGGCCTCTACAGTGGATaGTCTGTCAAAGGTCAGTGC | + |
Preference number: 4 (lower is better) Translates to: RLRALGCSRVPHSESCQRGLYSG*SVKGQC Trigger: GCACTGACCTTTGACAGAGCATCCACTGTAGAGGCC...ACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCCTCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR GCA 90 bp | CATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGACTGCAAGAGCTCGCCTaGTTGGCTTGTTCAAACAGC | + |
Preference number: 4 (lower is better) Translates to: HGPSSQQPPQSSEGLSLRLQELA*LACSNS Trigger: GCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAG...TCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CCA 90 bp | TGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCTCATTCTCTTTCTTGCGCCCTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGG | + |
Preference number: 4 (lower is better) Translates to: WGNPSSLELWAAHSLSCALARCQ*GRRRLG Trigger: CCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAG...GGCGCAAGAAAGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CCA 90 bp | CATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGAGGTCCCAGTTGTACTTaGTACCACCTTTCTCCTGGC | + |
Preference number: 4 (lower is better) Translates to: HGPSSQQPPQSSEGLSLRGPSCT*YHLSPG Trigger: GCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACC...TCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CCA 90 bp | GGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGCTGCCTCTTGCACTGTaGCTCCTGCAAAGACATCAC | + |
Preference number: 4 (lower is better) Translates to: GPWAVAECPILKAASVPWLPLAL*LLQRHH Trigger: GTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAG...CCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR TCA 90 bp | GGGCTCTCAGAGATGACAGCAGTGGCCTCTACAGTGGATGCTCTGTCAAAGGTCAGTTTTCTCCCTGCTTaGTACACCGGCCCCGGCCAC | + |
Preference number: 4 (lower is better) Translates to: GLSEMTAVASTVDALSKVSFLPA*YTGPGH Trigger: GTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACT...GACCTTTGACAGAGCATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR TCA 90 bp | CAGATCCAGCTGGGAGCCTGCAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAAGTTTTCTCCCTGCTTaGTACACCGGCCCCGGCCAC | + |
Preference number: 4 (lower is better) Translates to: QIQLGACRNGKEEPKPSRSFLPA*YTGPGH Trigger: GTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACT...TCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTGCAGGCTCCCAGCTGGATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR TCA 90 bp | ACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCTGGCAGGAAGCAGGGTaGTGTTCTTGGGGGAATCCT | + |
Preference number: 4 (lower is better) Translates to: TCPASFPWPLFSAAPTVIWQEAG*CSWGNP Trigger: AGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCA...GATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR GCA 90 bp | GTGGCCTCTACAGTGGATGCTCTGTCAAAGGTCAGTGCTCCAGAGGTAGTGATCCAGGCCCAGCTGTTTTaGCGCCGAGTCCGAGTCCTC | + |
Preference number: 4 (lower is better) Translates to: VASTVDALSKVSAPEVVIQAQLF*RRVRVL Trigger: GAGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTG...GATCACTACCTCTGGAGCACTGACCTTTGACAGAGCATCCACTGTAGAGGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | GGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCACACTGTGGTCACTTCTaGGAAGGCGGCGGCGGCGGC | + |
Preference number: 4 (lower is better) Translates to: GHNLLITCPASFPWPLFSHCGHF*EGGGGG Trigger: GCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTG...TGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | CAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTAACCTGGAGTGAGAGGTaGTGCTGGGCCCTTCAGCCC | + |
Preference number: 4 (lower is better) Translates to: QKWEGRTQTQQRIQQAALTWSER*CWALQP Trigger: GGGCTGAAGGGCCCAGCAGCACCTCTCACTCCAGGT...TAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | TGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTAAGCAGCTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGA | + |
Preference number: 4 (lower is better) Translates to: WEGRTQTQQRIQQAALSSFLLAR*QWGRRR Trigger: TCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAA...GCTGCTTAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | CTGCCTCTTGCACTGTGGCTCCTGCAAAGACATCACCTTGGGCTGGGCTCTCAGTACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGG | + |
Preference number: 4 (lower is better) Translates to: LPLALWLLQRHHLGLGSQYQFSP*LIHRPR Trigger: CCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTA...CTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | GCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCATGCCAGCATAGCGGATaGTTCTCTTCCAGTCCTTGC | + |
Preference number: 4 (lower is better) Translates to: APTVIRGPKPAMASQQSSCQHSG*FSSSPC Trigger: GCAAGGACTGGAAGAGAAGCATCCGCTATGCTGGCA...TGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | GCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCACTGCAAGAGCTCGCCTaGTTGGCTTGTTCAAACAGC | + |
Preference number: 4 (lower is better) Translates to: APTVIRGPKPAMASQQSSLQELA*LACSNS Trigger: GCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAG...TGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CCA 90 bp | CGCCGTGGCAGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTA | + |
Preference number: 4 (lower is better) Translates to: RRGRKQGDVLGGILLHWSVPPFS*PGASGV Trigger: TACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC...ACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCACGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CCA 90 bp | GGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGAAGAGCTCGCCTGCTTaGCTTGTTCAAACAGCGTCT | + |
Preference number: 4 (lower is better) Translates to: GPWAVAECPILKAASVPWKSSPA*LVQTAS Trigger: AGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTT...CCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CCA 90 bp | CCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAATGGACGTCATCAGCCTaGACAGTGACAGACGCTGAC | + |
Preference number: 4 (lower is better) Translates to: PPQSSEGLSLRWLHSRAQWTSSA*TVTDAD Trigger: GTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCA...TTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR TCA 90 bp | AGGCTGAGGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGG | + |
Preference number: 4 (lower is better) Translates to: RLRALGCSRVPHSESCQRLPLML*RRYLQR Trigger: CCTCTGCAGATAACGTCTTCACAACATCAGTGGCAA...ACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCCTCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR TCA 90 bp | ACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGGAGAAAGGGACGAAGAGCCTaGCAGGGCCACTCAGAGTCA | + |
Preference number: 4 (lower is better) Translates to: TVIRGPKPAMASQQSSRRKGRRA*QGHSES Trigger: TGACTCTGAGTGGCCCTGTCAGGCTCTTCGTCCCTT...TCTCCTTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR TCA 90 bp | TTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCCTGAGGGTGTCACAGTaGAGGTGGTGGCCGCCGTGG | + |
Preference number: 4 (lower is better) Translates to: FQGHNLLITCPASFPWPLLRVSQ*RWWPPW Trigger: CCACGGCGGCCACCACCTTCACTGTGACACCCTCAG...GAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR TCA 90 bp | TGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGACAATTTTGGGGTGTaGTGTTGGCAATGCAGCTTC | + |
Preference number: 4 (lower is better) Translates to: WPLFSAAPTVIRGPKPAMDNFGV*CWQCSF Trigger: GAAGCTGCATTGCCAACATCACACCCCAAAATTGTC...CATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR GCA 90 bp | TTACCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTGGGTCACAGCAGCTTCTCCGCCTCGGAGTCTaGGTCCTCCTCCGAGTCCTC | + |
Preference number: 4 (lower is better) Translates to: LPLSSLYQPAFSPGSQQLLRLGV*VLLRVL Trigger: GAGGACTCGGAGGAGGACGCAGACTCCGAGGCGGAG...AAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | CACTGGATGACCATTCTTGCAATGTTCTGTGAGGCCTGCTGGGCCAGGCCATGGTACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGG | + |
Preference number: 4 (lower is better) Translates to: HWMTILAMFCEACWARPWYQFSP*LIHRPR Trigger: CCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTA...CCATGGCCTGGCCCAGCAGGCCTCACAGAACATTGCAAGAATGGTCATCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | GTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGGTGGTGGCCGCCGTGGCAGGAGCTGCTGGCTCTTCCTaGCATAGCTTCAAACTCAGT | + |
Preference number: 4 (lower is better) Translates to: VVICPEGVTVKVVAAVAGAAGSS*HSFKLS Trigger: ACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGC...TCCTGCCACGGCGGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | GGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCACGGTGGCACGGCCAATaGGGGCAGCGATGTCAGGAC | + |
Preference number: 4 (lower is better) Translates to: GHNLLITCPASFPWPLFSRWHGQ*GQRCQD Trigger: GTCCTGACATCGCTGCCCGCATTGGCCGTGCCACCG...TGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CCA 90 bp | TTGGGGTGTGATGTTGGCAATGCAGCTTCTGGAAACGGGGCAATCTGGCAGCTGTGGCCACAGTCACTGTaGTCACTTCTGCGAAGGCGG | + |
Preference number: 4 (lower is better) Translates to: LGCDVGNAASGNGAIWQLWPQSL*SLLRRR Trigger: CCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCA...CAGCTGCCAGATTGCCCCGTTTCCAGAAGCTGCATTGCCAACATCACACCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CCA 90 bp | CAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTAGGGGTAGGAGGAGACTaGGGACCTGGAGTGAGAGGT | + |
Preference number: 4 (lower is better) Translates to: QKWEGRTQTQQRIQQAALGVGGD*GPGVRG Trigger: ACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCC...TAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | TGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGTCTCTGGAAGGGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTA | + |
Preference number: 4 (lower is better) Translates to: CSRVPHSESCQRSLVSGRVPPFS*PGASGV Trigger: TACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC...CCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CCA 90 bp | TCCAGGTACAGCCAGCTCCGATGTTCTGACATCTCCAGCCCACTGACCACGGTGGGTCCCAGTTGTACTTaGTACCACCTTTCTCCTGGC | + |
Preference number: 4 (lower is better) Translates to: SRYSQLRCSDISSPLTTVGPSCT*YHLSPG Trigger: GCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACC...CACCGTGGTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGGCTGTACCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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3UTR CAA 72 bp | CAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTaGACACATGACTGCTCTTTCCTCTCTGTATCAACC | + |
Preference number: 4 (lower is better) Translates to: QPVHSLMASRPQ*THDCSFLSVST Trigger: GGTTGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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3UTR CAA 72 bp | AACTCGCTGTCATACACCGAAGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGGCCAGGTGCCAGTGGG | + |
Preference number: 4 (lower is better) Translates to: NSLSYTEGSQLY*VPPFSWPGASG Trigger: CCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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3UTR CAA 72 bp | ACAGGCAACTCGCTGTCATACACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTCTCCTGGCCAGGTGCC | + |
Preference number: 4 (lower is better) Translates to: TGNSLSYTEGSQ*YLVPPFSWPGA Trigger: GGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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CDS-3UTR TCA 90 bp | CAGAGAAAAGGAGCCAGCAGAAGGTTCGAGGGCAGTCCAGGCTACATAAAACCCAAGGGACGAAGAGCCTaGCAGGGCCACTCAGAGTCA | + |
Preference number: 4 (lower is better) Translates to: QRKGASRRFEGSPGYIKPKGRRA*QGHSES Trigger: TGACTCTGAGTGGCCCTGTCAGGCTCTTCGTCCCTT...GGGTTTTATGTAGCCTGGACTGCCCTCGAACCTTCTGCTGGCTCCTTTTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR TCA 90 bp | TGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGTCTCTGGAAGGAGCGTCTTCAGCTGCTaGGCTGTGTTGAGTAGGGAG | + |
Preference number: 4 (lower is better) Translates to: CSRVPHSESCQRSLVSGRSVFSC*AVLSRE Trigger: CTCCCTACTCAACACAGCTCAGCAGCTGAAGACGCT...CCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR TCA 90 bp | CAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTACCTCCCGGCCGCAGTTaGCACATGACTCTTTCCTCT | + |
Preference number: 4 (lower is better) Translates to: QKWEGRTQTQQRIQQAALPPGRS*HMTLSS Trigger: AGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGG...TAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR TCA 90 bp | AATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCTGGGAAAGGCTGAGGTaGTGCAGGCATGTGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: NRAQGTETTPWRVLGGHSWERLR*CRHVSR Trigger: CCTGCTCACATGCCTGCATCACCTCAGCCTTTCCCA...GCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | AGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGAGGCTGTCACCGATCTaGAGGGCTGTCCTACCAGAC | + |
Preference number: 4 (lower is better) Translates to: RKQGDVLGGILLHWSCGQRLSPI*RAVLPD Trigger: GTCTGGTAGGACAGCCCTGCAGATCGGTGACAGCCT...CTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | CAGAGAAAAGGAGCCAGCAGAAGGTTCGAGGGCAGTCCAGGCTACATAAAACCCAGGCTGTCACCGATCTaGAGGGCTGTCCTACCAGAC | + |
Preference number: 4 (lower is better) Translates to: QRKGASRRFEGSPGYIKPRLSPI*RAVLPD Trigger: GTCTGGTAGGACAGCCCTGCAGATCGGTGACAGCCT...GGGTTTTATGTAGCCTGGACTGCCCTCGAACCTTCTGCTGGCTCCTTTTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | GTGGATGCTCTGTCAAAGGTCAGTGCTCCAGAGGTAGTGATCTGTCCTGAGGGTTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGA | + |
Preference number: 4 (lower is better) Translates to: VDALSKVSAPEVVICPEGFLLAR*QWGRRR Trigger: TCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAA...ACCCTCAGGACAGATCACTACCTCTGGAGCACTGACCTTTGACAGAGCATCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | CGCCGTGGCAGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGCCAGCATAGCGGATaGTTCTCTTCCAGTCCTTGC | + |
Preference number: 4 (lower is better) Translates to: RRGRKQGDVLGGILLHWSCQHSG*FSSSPC Trigger: GCAAGGACTGGAAGAGAAGCATCCGCTATGCTGGCA...ACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCACGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | TCTTCCAGGTACAGCCAGCTCCGATGTTCTGACATCTCCAGCCCACTGACCACGTGCCAGCATAGCGGATaGTTCTCTTCCAGTCCTTGC | + |
Preference number: 4 (lower is better) Translates to: SSRYSQLRCSDISSPLTTCQHSG*FSSSPC Trigger: GCAAGGACTGGAAGAGAAGCATCCGCTATGCTGGCA...CGTGGTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGGCTGTACCTGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGGGCCTCTACAGTGGATaGTCTGTCAAAGGTCAGTGC | + |
Preference number: 4 (lower is better) Translates to: GTRNRNDSMESVGRPQQLGLYSG*SVKGQC Trigger: GCACTGACCTTTGACAGAGCATCCACTGTAGAGGCC...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | AATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCTGGCCACAGTCACTGTaGTCACTTCTGCGAAGGCGG | + |
Preference number: 4 (lower is better) Translates to: NRAQGTETTPWRVLGGHSWPQSL*SLLRRR Trigger: CCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCA...GCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | AGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGTCTCTGGAAGGAGCGCAAAGACATCACCTTaGGCTGGGCTCTCAGAGATG | + |
Preference number: 4 (lower is better) Translates to: SRVPHSESCQRSLVSGRSAKTSP*AGLSEM Trigger: CATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGC...GCTCCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR CCA 90 bp | GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGGCAAAGACATCACCTTaGGCTGGGCTCTCAGAGATG | + |
Preference number: 4 (lower is better) Translates to: GTRNRNDSMESVGRPQQLAKTSP*AGLSEM Trigger: CATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGC...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | ACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAAGAGCTCGCCTGCTTaGCTTGTTCAAACAGCGTCT | + |
Preference number: 4 (lower is better) Translates to: TCPASFPWPLFSAAPTVIKSSPA*LVQTAS Trigger: AGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTT...GATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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3UTR CAA 72 bp | GGCACGGCCAATGCGGGCAGCGATGTCAGGACAATTTaGGGGTGTGATGTTGGCAATGCAGCTTCTGGAAAC | + |
Preference number: 4 (lower is better) Translates to: GTANAGSDVRTI*GCDVGNAASGN Trigger: GTTTCCAGAAGCTGCATTGCCAACATCACACCCCAAAATTGTCCTGACATCGCTGCCCGCATTGGCCGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR TCA 90 bp | TTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGGACAATTTTGGGGTGTaGTGTTGGCAATGCAGCTTC | + |
Preference number: 4 (lower is better) Translates to: LSGKFPMAPLLSSPHSHQDNFGV*CWQCSF Trigger: GAAGCTGCATTGCCAACATCACACCCCAAAATTGTC...CTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR TCA 90 bp | GGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCACCTCCCGGCCGCAGTTaGCACATGACTGCTCTTTCC | + |
Preference number: 4 (lower is better) Translates to: GHNLLITCPASFPWPLFSPPGRS*HMTALS Trigger: GGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGG...TGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR TCA 90 bp | TTCCGACAGCGCACAGGCAACTCGCTGTCATACACCGAAGGGTCCCAGTTGTACTGTCTGAGGTCTCCATaGCATCCTTCCCCAGAAACT | + |
Preference number: 4 (lower is better) Translates to: FRQRTGNSLSYTEGSQLYCLRSP*HPSPET Trigger: AGTTTCTGGGGAAGGATGTCATGGAGACCTCAGACA...GTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGTGCGCTGTCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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CDS-3UTR GCA 90 bp | TGTTTATTAACAGATAAGACAGGTATGTACACGTGGCATAGGGCACCCCAAGGGCTCCGCCTCGGAGTCTaGGTCCTCCTCCGAGTCCTC | + |
Preference number: 4 (lower is better) Translates to: CLLTDKTGMYTWHRAPQGLRLGV*VLLRVL Trigger: GAGGACTCGGAGGAGGACGCAGACTCCGAGGCGGAG...CCCTTGGGGTGCCCTATGCCACGTGTACATACCTGTCTTATCTGTTAATAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | GCAGAACGTAGAGCAGTAGTTAACCTTGTGGCAGCCGGTACACTCACTCATGGCTACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGG | + |
Preference number: 4 (lower is better) Translates to: AERRAVVNLVAAGTLTHGYQFSP*LIHRPR Trigger: CCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTA...GCCATGAGTGAGTGTACCGGCTGCCACAAGGTTAACTACTGCTCTACGTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | TGTTGGCAATGCAGCTTCTGGAAACGGGGCAATCTGGCAGCTGTCCTGATAGCCTGCCAGCATAGCGGATaGTTCTCTTCCAGTCCTTGC | + |
Preference number: 4 (lower is better) Translates to: CWQCSFWKRGNLAAVLIACQHSG*FSSSPC Trigger: GCAAGGACTGGAAGAGAAGCATCCGCTATGCTGGCA...GGCTATCAGGACAGCTGCCAGATTGCCCCGTTTCCAGAAGCTGCATTGCCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210062.2 ENSMUST00000210816.2 ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | CATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGACAGTTGACACATGACTaGTCTTTCCTCTCTGTATCA | + |
Preference number: 4 (lower is better) Translates to: HGPSSQQPPQSSEGLSLRQLTHD*SFLSVS Trigger: TGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTG...TCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR CCA 90 bp | GGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCGGTCCCAGTTGTACTTaGTACCACCTTTCTCCTGGC | + |
Preference number: 4 (lower is better) Translates to: GSRVMFLGESFFTGVVGSGPSCT*YHLSPG Trigger: GCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACC...GCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CCA 90 bp | CCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGGGGAATCCTTCTTCACTaGAGTTGTGGGCAGCTCATT | + |
Preference number: 4 (lower is better) Translates to: PTVIRGPKPAMASQQSSRGILLH*SCGQLI Trigger: AATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCC...CCTTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR CCA 90 bp | TGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTAAGCAGCCAGTGGCCTCTACAGTaGATGCTCTGTCAAAGGTCA | + |
Preference number: 4 (lower is better) Translates to: WEGRTQTQQRIQQAALSSQWPLQ*MLCQRS Trigger: TGACCTTTGACAGAGCATCCACTGTAGAGGCCACTG...GCTGCTTAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | CACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAGAGCTCGCCTGCTTaGCTTGTTCAAACAGCGTCT | + |
Preference number: 4 (lower is better) Translates to: HLGGKGRRISEFEASLVYKSSPA*LVQTAS Trigger: AGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTT...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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3UTR CAA 72 bp | AGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTaGGTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAA | + |
Preference number: 4 (lower is better) Translates to: SRVPHSESCQRS*VSGRSLFPRAQ Trigger: TTGTGCCCTTGGAAACAAGCTCCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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CDS-3UTR TCA 90 bp | AGTGCTCCAGAGGTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGGTGGTGGCCTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGG | + |
Preference number: 4 (lower is better) Translates to: SAPEVVICPEGVTVKVVALPLML*RRYLQR Trigger: CCTCTGCAGATAACGTCTTCACAACATCAGTGGCAA...GGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTACCTCTGGAGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR TCA 90 bp | AATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCGGTAGTGATCTGTCCTaGGGGTGTCACAGTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: NRAQGTETTPWRVLGGHSGSDLS*GCHSEG Trigger: ACCTTCACTGTGACACCCTCAGGACAGATCACTACC...GCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
||
CDS-3UTR TCA 90 bp | CACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACGACAATTTTGGGGTGTaGTGTTGGCAATGCAGCTTC | + |
Preference number: 4 (lower is better) Translates to: HLGGKGRRISEFEASLVYDNFGV*CWQCSF Trigger: GAAGCTGCATTGCCAACATCACACCCCAAAATTGTC...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR TCA 90 bp | TTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCCCAGCTCCGATGTTCTaGCATCTCCAGCCCACTGAC | + |
Preference number: 4 (lower is better) Translates to: FQGHNLLITCPASFPWPLPAPMF*HLQPTD Trigger: GTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGG...GAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR GCA 90 bp | GGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCATTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGA | + |
Preference number: 4 (lower is better) Translates to: GHNLLITCPASFPWPLFSFLLAR*QWGRRR Trigger: TCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAA...TGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | ATTCTCTTTCTTGCGCCTTTTATAAGGGACGAAGAGCCTGACAGGGCCACTCAGTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGA | + |
Preference number: 4 (lower is better) Translates to: ILFLAPFIRDEEPDRATQFLLAR*QWGRRR Trigger: TCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAA...CTGAGTGGCCCTGTCAGGCTCTTCGTCCCTTATAAAAGGCGCAAGAAAGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209397.2 |
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CDS-3UTR GCA 90 bp | GGCAGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGGCTGCTGGCTCTTCCTaGCATAGCTTCAAACTCAGT | + |
Preference number: 4 (lower is better) Translates to: GRKQGDVLGGILLHWSCGAAGSS*HSFKLS Trigger: ACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGC...CCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | GTGGCCTCTACAGTGGATGCTCTGTCAAAGGTCAGTGCTCCAGAGGTAGTGATCTGCCAGCATAGCGGATaGTTCTCTTCCAGTCCTTGC | + |
Preference number: 4 (lower is better) Translates to: VASTVDALSKVSAPEVVICQHSG*FSSSPC Trigger: GCAAGGACTGGAAGAGAAGCATCCGCTATGCTGGCA...GATCACTACCTCTGGAGCACTGACCTTTGACAGAGCATCCACTGTAGAGGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210062.2 ENSMUST00000210816.2 ENSMUST00000210830.2 |
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CDS-3UTR GCA 90 bp | AGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGTCTCTGGAAGGAGCTCTGTCAAAGGTCAGTaGTCCAGAGGTAGTGATCTG | + |
Preference number: 4 (lower is better) Translates to: SRVPHSESCQRSLVSGRSSVKGQ*SRGSDL Trigger: CAGATCACTACCTCTGGAGCACTGACCTTTGACAGA...GCTCCTTCCAGAGACCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR GCA 90 bp | CAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTACTGCAAGAGCTCGCCTaGTTGGCTTGTTCAAACAGC | + |
Preference number: 4 (lower is better) Translates to: QKWEGRTQTQQRIQQAALLQELA*LACSNS Trigger: GCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAG...TAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGGGAATCCTTCTTCACTaGAGTTGTGGGCAGCTCATT | + |
Preference number: 4 (lower is better) Translates to: GTRNRNDSMESVGRPQQLGILLH*SCGQLI Trigger: AATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCC...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | CAGAAATGGGAAGGAAGAACCCAAACCCAGCAGAGGATCCAGCAGGCAGCTCTACTGCCTCTTGCACTGTaGCTCCTGCAAAGACATCAC | + |
Preference number: 4 (lower is better) Translates to: QKWEGRTQTQQRIQQAALLPLAL*LLQRHH Trigger: GTGATGTCTTTGCAGGAGCCACAGTGCAAGAGGCAG...TAGAGCTGCCTGCTGGATCCTCTGCTGGGTTTGGGTTCTTCCTTCCCATTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | ATGGTCTTTCCAGTCCTTGCGCTGGCAGAACGTAGAGCAGTAGTTAACCTTGTGACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTG | + |
Preference number: 4 (lower is better) Translates to: MVFPVLALAERRAVVNLVTCILA*VTAASL Trigger: CAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGT...CACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGCAAGGACTGGAAAGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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CDS-3UTR CCA 90 bp | TTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGACACTTTCTTCAACATaGACGTCATCAGCCTGGACA | + |
Preference number: 4 (lower is better) Translates to: LSGKFPMAPLLSSPHSHQTLSST*TSSAWT Trigger: TGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGT...CTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CCA 90 bp | CAATTTAATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCTGCCCCGCAGGTGCTTaGAGTGAGTCCACCTGCCTA | + |
Preference number: 4 (lower is better) Translates to: QFNRAQGTETTPWRVLGGCPAGA*SESTCL Trigger: TAGGCAGGTGGACTCACTCCAAGCACCTGCGGGGCA...GCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR TCA 90 bp | TGTTTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCCAGCTCCGATGTTCTaGCATCTCCAGCCCACTGAC | + |
Preference number: 4 (lower is better) Translates to: CFQGHNLLITCPASFPWPPAPMF*HLQPTD Trigger: GTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGG...GGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR GCA 90 bp | AGGAAGCAGGGTGATGTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGGCTGCTGGCTCTTCCTaGCATAGCTTCAAACTCAGT | + |
Preference number: 4 (lower is better) Translates to: RKQGDVLGGILLHWSCGQAAGSS*HSFKLS Trigger: ACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGC...CTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CCA 90 bp | GAGAAGACATTTTCTGAAGAAATCCATGAAGAGCACTGCTGCCAGGCAAGCACAAGTGAGAGGTGCTGCTaGGCCCTTCAGCCCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: EKTFSEEIHEEHCCQASTSERCC*ALQPSG Trigger: ACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCACT...TGTGCTTGCCTGGCAGCAGTGCTCTTCATGGATTTCTTCAGAAAATGTCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CCA 90 bp | CAATTTAATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTA | + |
Preference number: 4 (lower is better) Translates to: QFNRAQGTETTPWRVLGGVPPFS*PGASGV Trigger: TACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC...GCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR TCA 90 bp | CAATTTAATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCAGCGTCTTCAGCTGCTaGGCTGTGTTGAGTAGGGAG | + |
Preference number: 4 (lower is better) Translates to: QFNRAQGTETTPWRVLGGSVFSC*AVLSRE Trigger: CTCCCTACTCAACACAGCTCAGCAGCTGAAGACGCT...GCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | CTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCACTCCGCCTCGGAGTCTaGGTCCTCCTCCGAGTCCTC | + |
Preference number: 4 (lower is better) Translates to: LAQTATFSITLSSTWTSSLRLGV*VLLRVL Trigger: GAGGACTCGGAGGAGGACGCAGACTCCGAGGCGGAG...TGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | AATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCTCTGTCAAAGGTCAGTaGTCCAGAGGTAGTGATCTG | + |
Preference number: 4 (lower is better) Translates to: NRAQGTETTPWRVLGGHSSVKGQ*SRGSDL Trigger: CAGATCACTACCTCTGGAGCACTGACCTTTGACAGA...GCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | CGTTCCTTGGTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTG | + |
Preference number: 4 (lower is better) Translates to: RSLVSGRSLFPRAQSVNNTCILA*VTAASL Trigger: CAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGT...GTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGACCAAGGAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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3UTR CAA 72 bp | GATGTTGTGAAGACGTTATCTGCAGAGGACCCCACGTaGGCCACAGTCACTGTGGTCACTTCTTTCTCCCTT | + |
Preference number: 4 (lower is better) Translates to: DVVKTLSAEDPT*ATVTVVTSFSL Trigger: AAGGGAGAAAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGCAGATAACGTCTTCACAACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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CDS-3UTR TCA 90 bp | CTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCTCATTCTCTTTCTTGCGTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGG | + |
Preference number: 4 (lower is better) Translates to: LGGILLHWSCGQLILFLALPLML*RRYLQR Trigger: CCTCTGCAGATAACGTCTTCACAACATCAGTGGCAA...CGCAAGAAAGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR TCA 90 bp | TGTTTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCTGGCCACACACATGCTaGTGGTCTTTCCAGTCCTCT | + |
Preference number: 4 (lower is better) Translates to: CFQGHNLLITCPASFPWPWPHTC*WSFQSS Trigger: AGAGGACTGGAAAGACCATCAGCATGTGTGTGGCCA...GGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209600.2 |
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CDS-3UTR GCA 90 bp | GGGGTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGCACTGTGGTCACTTCTaGGAAGGCGGCGGCGGCGGC | + |
Preference number: 4 (lower is better) Translates to: GVGVLFTCLLTDKTGMYTHCGHF*EGGGGG Trigger: GCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTG...CGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | GCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCAGCCTGGACAGTGTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGA | + |
Preference number: 4 (lower is better) Translates to: ATFSITLSSTWTSSAWTVFLLAR*QWGRRR Trigger: TCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAA...CACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | TTGGTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACTTGTCCTCACAGCAGCTTCCCTaGAAGAGCTCGCCTGCTTGG | + |
Preference number: 4 (lower is better) Translates to: LVSGRSLFPRAQSVNNLSSQQLP*KSSPAW Trigger: CCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGA...GGACAAGTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CCA 90 bp | GGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGGTACAACTATTAGTGTaGCTTTTTCAGTGTTCAGGC | + |
Preference number: 4 (lower is better) Translates to: GTRNRNDSMESVGRPQQLVQLLV*LFQCSG Trigger: GCCTGAACACTGAAAAAGCCACACTAATAGTTGTAC...CAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | AGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCCAGTGGCCTCTACAGTaGATGCTCTGTCAAAGGTCA | + |
Preference number: 4 (lower is better) Translates to: RAQSVNNLSGKFPMAPLLQWPLQ*MLCQRS Trigger: TGACCTTTGACAGAGCATCCACTGTAGAGGCCACTG...GAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR CCA 90 bp | ATGGTCTTTCCAGTCCTTGCGCTGGCAGAACGTAGAGCAGTAGTTAACCTTGTGAAGAGCTCGCCTGCTTaGCTTGTTCAAACAGCGTCT | + |
Preference number: 4 (lower is better) Translates to: MVFPVLALAERRAVVNLVKSSPA*LVQTAS Trigger: AGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTT...CACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGCAAGGACTGGAAAGACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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3UTR CAA 72 bp | AGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACTaGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGC | + |
Preference number: 4 (lower is better) Translates to: RSLFPRAQSVNN*SGKFPMAPLLS Trigger: GCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 ENSMUST00000210062.2 |
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CDS-3UTR TCA 90 bp | AGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCGGTAGTGATCTGTCCTaGGGGTGTCACAGTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: RSLFPRAQSVNNLSGKFPGSDLS*GCHSEG Trigger: ACCTTCACTGTGACACCCTCAGGACAGATCACTACC...GGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR TCA 90 bp | TTCTTTCTCCCTTTGCAAAGAAGCTGCAAGTCCCATAGGTCTAGGACACCTCCTCTTGTGTCCACTGTCTaGGGTCTCCATGACATCCTT | + |
Preference number: 4 (lower is better) Translates to: FFLPLQRSCKSHRSRTPPLVSTV*GLHDIL Trigger: AAGGATGTCATGGAGACCTCAGACAGTGGACACAAG...AGGAGGTGTCCTAGACCTATGGGACTTGCAGCTTCTTTGCAAAGGGAGAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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CDS-3UTR GCA 90 bp | GCCTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATAGGCTGTCACCGATCTaGAGGGCTGTCCTACCAGAC | + |
Preference number: 4 (lower is better) Translates to: AWLKQQLFLSHFLQHGRHRLSPI*RAVLPD Trigger: GTCTGGTAGGACAGCCCTGCAGATCGGTGACAGCCT...ATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | AATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCCACAGCGCTCATTCTCTTTCTTaGGCCTTTTATAAGGGACGA | + |
Preference number: 4 (lower is better) Translates to: NRAQGTETTPWRVLGGHSAHSLS*AFYKGR Trigger: TCGTCCCTTATAAAAGGCGCAAGAAAGAGAATGAGC...GCTGTGGCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | GAAGCCTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTTCACAGCAGCTTCCCTaGAAGAGCTCGCCTGCTTGG | + |
Preference number: 4 (lower is better) Translates to: EAWLKQQLFLSHFLQHGRSQQLP*KSSPAW Trigger: CCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGA...ACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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CDS-3UTR GCA 90 bp | GTCTTTCCAGTCCTTGCGCTGGCAGAACGTAGAGCAGTAGTTAACCTTGTGGCACTAACCTTTTGCCTGTaGCTTTTTATCCCTGATCGG | + |
Preference number: 4 (lower is better) Translates to: VFPVLALAERRAVVNLVALTFCL*LFIPDR Trigger: CCGATCAGGGATAAAAAGGCACAGGCAAAAGGTTAG...TGCCACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGCAAGGACTGGAAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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CDS-3UTR CCA 90 bp | ATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGAAAAGAGTGAGAGGTGCTGCTaGGCCCTTCAGCCCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: MEFYSSLIYMKPCLKDEKSERCC*ALQPSG Trigger: ACCACTGGGCTGAAGGGCCCAGCAGCACCTCTCACT...CTTTTCGTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR TCA 90 bp | ATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGAAAAGCCAGCTCCGATGTTCTaGCATCTCCAGCCCACTGAC | + |
Preference number: 4 (lower is better) Translates to: MEFYSSLIYMKPCLKDEKPAPMF*HLQPTD Trigger: GTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGG...CTTTTCGTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR TCA 90 bp | CCTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCAGCGTCTTCAGCTGCTaGGCTGTGTTGAGTAGGGAG | + |
Preference number: 4 (lower is better) Translates to: PGSNSNFFYHTFFNMDVISVFSC*AVLSRE Trigger: CTCCCTACTCAACACAGCTCAGCAGCTGAAGACGCT...GATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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CDS-3UTR GCA 90 bp | GGGGTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGGGGAGGCTGCACACCTaGCTCTTGCACTGTGGCTCC | + |
Preference number: 4 (lower is better) Translates to: GVGVLFTCLLTDKTGMYTGRLHT*LLHCGS Trigger: GGAGCCACAGTGCAAGAGGCAGGTGTGCAGCCTCCC...CGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR GCA 90 bp | CAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCAGCCTGGACAGCTGCAAGAGCTCGCCTaGTTGGCTTGTTCAAACAGC | + |
Preference number: 4 (lower is better) Translates to: QQLFLSHFLQHGRHQPGQLQELA*LACSNS Trigger: GCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAG...CTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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CDS-3UTR CCA 90 bp | CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTG | + |
Preference number: 4 (lower is better) Translates to: LYMEFYSSLIYMKPCLKDTCILA*VTAASL Trigger: CAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGT...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGTCACAGCAGCTTCCCTaGAAGAGCTCGCCTGCTTGG | + |
Preference number: 4 (lower is better) Translates to: NVMRFVLPSPILDYFVLESQQLP*KSSPAW Trigger: CCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGA...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | TTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCGTACAACTATTAGTGTaGCTTTTTCAGTGTTCAGGC | + |
Preference number: 4 (lower is better) Translates to: FQGHNLLITCPASFPWPLVQLLV*LFQCSG Trigger: GCCTGAACACTGAAAAAGCCACACTAATAGTTGTAC...GAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CCA 90 bp | ACATTACCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTGGGTCACAGCAGGTACAACTATTAGTGTaGCTTTTTCAGTGTTCAGGC | + |
Preference number: 4 (lower is better) Translates to: TLPLSSLYQPAFSPGSQQVQLLV*LFQCSG Trigger: GCCTGAACACTGAAAAAGCCACACTAATAGTTGTAC...CTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGGTAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
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CDS-3UTR CCA 90 bp | CTGCTGAAATACACTAATCTTAAACAAAATGTTTCATTAGTGTCTGCTACCCTCGGGGTAGGAGGAGACTaGGGACCTGGAGTGAGAGGT | + |
Preference number: 4 (lower is better) Translates to: LLKYTNLKQNVSLVSATLGVGGD*GPGVRG Trigger: ACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCC...GAGGGTAGCAGACACTAATGAAACATTTTGTTTAAGATTAGTGTATTTCAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
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CDS-3UTR TCA 90 bp | AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGTGGCAGGAAGCAGGGTaGTGTTCTTGGGGGAATCCT | + |
Preference number: 4 (lower is better) Translates to: NVMRFVLPSPILDYFVLEWQEAG*CSWGNP Trigger: AGGATTCCCCCAAGAACATCACCCTGCTTCCTGCCA...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR TCA 90 bp | ATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGAAAAGGCCGCAGTTGACACATaGCTCTTTCCTCTCTGTATC | + |
Preference number: 4 (lower is better) Translates to: MEFYSSLIYMKPCLKDEKAAVDT*LFPLCI Trigger: GATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGC...CTTTTCGTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | GGGGTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGTACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGG | + |
Preference number: 4 (lower is better) Translates to: GVGVLFTCLLTDKTGMYTYQFSP*LIHRPR Trigger: CCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTA...CGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | ACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCAGCCTGGACACCGTGCCTAACCTTTTaGCTGTGCCTTTTTATCCCT | + |
Preference number: 4 (lower is better) Translates to: TATFSITLSSTWTSSAWTPCLTF*LCLFIP Trigger: AGGGATAAAAAGGCACAGGCAAAAGGTTAGGCACGG...TGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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CDS-3UTR GCA 90 bp | CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGCTGCTGGCTCTTCCTaGCATAGCTTCAAACTCAGT | + |
Preference number: 4 (lower is better) Translates to: LYMEFYSSLIYMKPCLKDAAGSS*HSFKLS Trigger: ACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGC...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGGGTCCCAGTTGTACTTaGTACCACCTTTCTCCTGGC | + |
Preference number: 4 (lower is better) Translates to: NVMRFVLPSPILDYFVLEGPSCT*YHLSPG Trigger: GCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACC...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CCA 90 bp | GCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCAGCCTGGACAGTGGTACAACTATTAGTGTaGCTTTTTCAGTGTTCAGGC | + |
Preference number: 4 (lower is better) Translates to: ATFSITLSSTWTSSAWTVVQLLV*LFQCSG Trigger: GCCTGAACACTGAAAAAGCCACACTAATAGTTGTAC...CACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210062.2 |
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CDS-3UTR GCA 90 bp | GTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGTGGGCTGCTGGCTCTTCCTaGCATAGCTTCAAACTCAGT | + |
Preference number: 4 (lower is better) Translates to: VGVLFTCLLTDKTGMYTWAAGSS*HSFKLS Trigger: ACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGC...CCACGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR TCA 90 bp | AGCCAGGGTTGTGTAGAAAAACCTTGTTTCAAACAAACAAACAAACAAACAAACTTGCCACTGATGTTGTaGAGACGTTATCTGCAGAGG | + |
Preference number: 4 (lower is better) Translates to: SQGCVEKPCFKQTNKQTNLPLML*RRYLQR Trigger: CCTCTGCAGATAACGTCTTCACAACATCAGTGGCAA...GTTTGTTTGTTTGTTTGTTTGTTTGAAACAAGGTTTTTCTACACAACCCTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR GCA 90 bp | GGGGTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGGCTCATTCTCTTTCTTaGGCCTTTTATAAGGGACGA | + |
Preference number: 4 (lower is better) Translates to: GVGVLFTCLLTDKTGMYTAHSLS*AFYKGR Trigger: TCGTCCCTTATAAAAGGCGCAAGAAAGAGAATGAGC...CGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCACCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR CCA 90 bp | GTGGGAGTTTTATTTACATGTTTATTAACAGATAAGACAGGTATGTACACGTGGACACTTTCTTCAACATaGACGTCATCAGCCTGGACA | + |
Preference number: 4 (lower is better) Translates to: VGVLFTCLLTDKTGMYTWTLSST*TSSAWT Trigger: TGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGT...CCACGTGTACATACCTGTCTTATCTGTTAATAAACATGTAAATAAAACTCCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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3UTR CAA 72 bp | TTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTaGAGTGTGCACTTTGTAGATGACAATGTCATGTCA | + |
Preference number: 4 (lower is better) Translates to: LFCPPQYLIISF*SVHFVDDNVMS Trigger: TGACATGACATTGTCATCTACAAAGTGCACACTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS GCA 90 bp | TGCGGCCGCGGCGGCCGCCGCCACCGCGGCAGCGGCCGCCACAGCTaGCGCCTCGGCCAGGCCCAGCTGTTTTGCCGCCGAGTCCGAGTC | + |
Preference number: 5 (lower is better) Translates to: CGRGGRRHRGSGRHS*RLGQAQLFCRRVRV Trigger: GACTCGGACTCGGCGGCAAAACAGCTGGGCCTGGCCGAGGCGGCAGCTGTGGCGGCCGCTGCCGCGGTGGCGGCGGCCGCCGCGGCCGCA 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080553.9 ENSMUST00000209608.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS CCA 90 bp | TTCCTCCTGCGAAGGCGGCGGCGGCGGCGGCGGCCTCATCGGGGCTaGGCAGAGCCTCGGTACCCATATCCATGTGCCCAGATTCGGCCG | + |
Preference number: 5 (lower is better) Translates to: FLLRRRRRRRRPHRG*AEPRYPYPCAQIRP Trigger: CGGCCGAATCTGGGCACATGGATATGGGTACCGAGGCTCTGCCCAGCCCCGATGAGGCCGCCGCCGCCGCCGCCGCCTTCGCAGGAGGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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CDS GCA 90 bp | GCGGCCTCATCGGGGCTGGGCAGAGCCTCGGTACCCATATCCATGTaGCCAGATTCGGCCGCCATCACCGCCACAGCGGTGACCCGCCGC | + |
Preference number: 5 (lower is better) Translates to: AASSGLGRASVPISM*PDSAAITATAVTRR Trigger: GCGGCGGGTCACCGCTGTGGCGGTGATGGCGGCCGAATCTGGGCACATGGATATGGGTACCGAGGCTCTGCCCAGCCCCGATGAGGCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209608.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS GCA 90 bp | ATCTGCAGAGGACCCCACGTTGGCCACAGTCACTGTGGTCACTTCTaGGAAGGCGGCGGCGGCGGCGGCGGCCTCATCGGGGCTGGGCAG | + |
Preference number: 5 (lower is better) Translates to: ICRGPHVGHSHCGHF*EGGGGGGGLIGAGQ Trigger: CTGCCCAGCCCCGATGAGGCCGCCGCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGCAGAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS CCA 90 bp | TCACTTCTGCGAAGGCGGCGGCGGCGGCGGCGGCCTCATCGGGGCTaGGCAGAGCCTCGGTACCCATATCCATGTGCCCAGATTCGGCCG | + |
Preference number: 5 (lower is better) Translates to: SLLRRRRRRRRPHRG*AEPRYPYPCAQIRP Trigger: CGGCCGAATCTGGGCACATGGATATGGGTACCGAGGCTCTGCCCAGCCCCGATGAGGCCGCCGCCGCCGCCGCCGCCTTCGCAGAAGTGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS TCA 90 bp | CCATATCCATGTGCCCAGATTCGGCCGCCATCACCGCCACAGCGGTaGCCCGCCGCGTCTCGCGCTCCGCCTCGGAGTCTGCGTCCTCCT | + |
Preference number: 5 (lower is better) Translates to: PYPCAQIRPPSPPQR*PAASRAPPRSLRPP Trigger: AGGAGGACGCAGACTCCGAGGCGGAGCGCGAGACGCGGCGGGTCACCGCTGTGGCGGTGATGGCGGCCGAATCTGGGCACATGGATATGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209608.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS-3UTR CAA 90 bp | GGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGGTGGGAGAGACAGCTTaGGTGGGGGTGGACGGTGGC | + |
Preference number: 5 (lower is better) Translates to: GPSSQQPPQSSEGLSLRWVGETA*VGVDGG Trigger: GCCACCGTCCACCCCCACCAAAGCTGTCTCTCCCAC...CCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CAA 90 bp | CGTGATAGGCTGAGGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCCAGGCCCAGCTGTTTaGCCGCCGAGTCCGAGTCCT | + |
Preference number: 5 (lower is better) Translates to: RDRLRALGCSRVPHSESCPGPAV*PPSPSP Trigger: AGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTGG...GCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCCTCAGCCTATCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS TCA 90 bp | GGCCCCGGCCACCTGAGCCGAGCCTACTCTTGTAGAGCGTGCCACTaGTGTTCCGACAGCGCACAGGCAACTCGCTGTCATACACCGAAG | + |
Preference number: 5 (lower is better) Translates to: GPGHLSRAYSCRACH*CSDSAQATRCHTPK Trigger: CTTCGGTGTATGACAGCGAGTTGCCTGTGCGCTGTCGGAACATCAGTGGCACGCTCTACAAGAGTAGGCTCGGCTCAGGTGGCCGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS-3UTR CAA 90 bp | AATCTGGCAGCTGTCCTGATAGCCAGGGTAGTGGGGTTCAGGGTGGCCAACCCTCCAGGCCCAGCTGTTTaGCCGCCGAGTCCGAGTCCT | + |
Preference number: 5 (lower is better) Translates to: NLAAVLIARVVGFRVANPPGPAV*PPSPSP Trigger: AGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTGG...AGGGTTGGCCACCCTGAACCCCACTACCCTGGCTATCAGGACAGCTGCCAGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210830.2 |
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CDS-3UTR CAA 90 bp | GGGCCCTGGGCTGTAGCAGAGTGCCCCATTCTGAAAGCTGCCAGCGTTCCTTGGGCTCGCCTGCTTGGCTaGTTCAAACAGCGTCTTCAG | + |
Preference number: 5 (lower is better) Translates to: GPWAVAECPILKAASVPWARLLG*FKQRLQ Trigger: CTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGC...CCAAGGAACGCTGGCAGCTTTCAGAATGGGGCACTCTGCTACAGCCCAGGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CAA 90 bp | CCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGCCTCCCGGCCGCAGTaGACACATGACTGCTCTTTC | + |
Preference number: 5 (lower is better) Translates to: PPQSSEGLSLRWLHSRAQASRPQ*THDCSF Trigger: GAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGC...TTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS TCA 90 bp | CTGCCTAGGCACCTATCCAGGACACTAGAGTGGGAAAGGCTGAGGTaGTGCAGGCATGTGAGCAGGCACGCTACCTTGCGCTGGCAGAAC | + |
Preference number: 5 (lower is better) Translates to: LPRHLSRTLEWERLR*CRHVSRHATLRWQN Trigger: GTTCTGCCAGCGCAAGGTAGCGTGCCTGCTCACATGCCTGCATCACCTCAGCCTTTCCCACTCTAGTGTCCTGGATAGGTGCCTAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS GCA 90 bp | CGAAGGGTCCCAGTTGTACTTGGTACCACCTTTCTCCTGGCCAGGTaGCAGTGGGGTAGGAGGAGACTGGGGACCAGGACATGTCCTGAT | + |
Preference number: 5 (lower is better) Translates to: RRVPVVLGTTFLLAR*QWGRRRLGTRTCPD Trigger: ATCAGGACATGTCCTGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209397.2 |
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CDS CCA 90 bp | GTACCACCTTTCTCCTGGCCAGGTGCCAGTGGGGTAGGAGGAGACTaGGGACCAGGACATGTCCTGATATCGATGCTGCGTTTGCCACTG | + |
Preference number: 5 (lower is better) Translates to: VPPFSWPGASGVGGD*GPGHVLISMLRLPL Trigger: CAGTGGCAAACGCAGCATCGATATCAGGACATGTCCTGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209397.2 |
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CDS-3UTR CAA 90 bp | GTAGTGATCTGTCCTGAGGGTGTCACAGTGAAGGTGGTGGCCGCCGTGGCAGGAGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGG | + |
Preference number: 5 (lower is better) Translates to: VVICPEGVTVKVVAAVAGGSQLY*VPPFSW Trigger: CCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCC...TCCTGCCACGGCGGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CAA 90 bp | AACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGCCCCAACCCAGACCCTGCAAAGACATCACCTaGGGCTGGGCTCTCAGAGAT | + |
Preference number: 5 (lower is better) Translates to: NDSMESVGRPQQLPQPRPCKDIT*GWALRD Trigger: ATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCA...GGGTCTGGGTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CAA 90 bp | CCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAAGGCTGCACACCTGCCTCTaGCACTGTGGCTCCTGCAAA | + |
Preference number: 5 (lower is better) Translates to: PTVIRGPKPAMASQQSSRLHTCL*HCGSCK Trigger: TTTGCAGGAGCCACAGTGCAAGAGGCAGGTGTGCAG...CCTTGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR CAA 90 bp | GCCCCCACAGTCATCAGAGGGCCTAAGCCTGCGATGGCTTCACAGCAGAGCTCAGCTCGCCTGCTTGGCTaGTTCAAACAGCGTCTTCAG | + |
Preference number: 5 (lower is better) Translates to: APTVIRGPKPAMASQQSSARLLG*FKQRLQ Trigger: CTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGC...TGAGCTCTGCTGTGAAGCCATCGCAGGCTTAGGCCCTCTGATGACTGTGGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS TCA 90 bp | GCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTGACACATaGCTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTGGGTCAC | + |
Preference number: 5 (lower is better) Translates to: AAGTLTHGLPAAVDT*LFPLCINLHSRLGH Trigger: GTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS GCA 90 bp | CCTGCCATAGCTTCAAACTCAGTTGGGCTGTACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGGCCACCTGAGCCGAGCCTACTCTTG | + |
Preference number: 5 (lower is better) Translates to: PAIASNSVGLYQFSP*LIHRPRPPEPSLLL Trigger: CAAGAGTAGGCTCGGCTCAGGTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTACAGCCCAACTGAGTTTGAAGCTATGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS CCA 90 bp | CCAGTCCTTGCTGCTGGCTCTTCCTGCCATAGCTTCAAACTCAGTTaGGCTGTACCAGTTTTCTCCCTGCTTGATACACCGGCCCCGGCC | + |
Preference number: 5 (lower is better) Translates to: PVLAAGSSCHSFKLS*AVPVFSLLDTPAPA Trigger: GGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTACAGCCCAACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGCAAGGACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS CCA 90 bp | TCATACACCGAAGGGTCCCAGTTGTACTTGGTACCACCTTTCTCCTaGCCAGGTGCCAGTGGGGTAGGAGGAGACTGGGGACCAGGACAT | + |
Preference number: 5 (lower is better) Translates to: SYTEGSQLYLVPPFS*PGASGVGGDWGPGH Trigger: ATGTCCTGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209397.2 |
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CDS-3UTR CAA 90 bp | TCCAGGTACAGCCAGCTCCGATGTTCTGACATCTCCAGCCCACTGACCACGGTGGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGG | + |
Preference number: 5 (lower is better) Translates to: SRYSQLRCSDISSPLTTVGSQLY*VPPFSW Trigger: CCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCC...CACCGTGGTCAGTGGGCTGGAGATGTCAGAACATCGGAGCTGGCTGTACCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CAA 90 bp | TCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGTGCAAAGACATCACCTaGGGCTGGGCTCTCAGAGAT | + |
Preference number: 5 (lower is better) Translates to: SGKFPMAPLLSSPHSHQRCKDIT*GWALRD Trigger: ATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCA...CCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS TCA 90 bp | CCTTGTGGCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTaGCACATGACTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCT | + |
Preference number: 5 (lower is better) Translates to: PCGSRYTHSWPPGRS*HMTLSSLYQPAFSP Trigger: AGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGCCACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS CCA 90 bp | GTCCCAGTTGTACTTGGTACCACCTTTCTCCTGGCCAGGTGCCAGTaGGGTAGGAGGAGACTGGGGACCAGGACATGTCCTGATATCGAT | + |
Preference number: 5 (lower is better) Translates to: VPVVLGTTFLLARCQ*GRRRLGTRTCPDID Trigger: ATCGATATCAGGACATGTCCTGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGAGAAAGGTGGTACCAAGTACAACTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209397.2 |
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CDS-3UTR CAA 90 bp | AGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCGTGGGAGAGACAGCTTaGGTGGGGGTGGACGGTGGC | + |
Preference number: 5 (lower is better) Translates to: RAQSVNNLSGKFPMAPLLVGETA*VGVDGG Trigger: GCCACCGTCCACCCCCACCAAAGCTGTCTCTCCCAC...GAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CAA 90 bp | CACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACGCTCGCCTGCTTGGCTaGTTCAAACAGCGTCTTCAG | + |
Preference number: 5 (lower is better) Translates to: HLGGKGRRISEFEASLVYARLLG*FKQRLQ Trigger: CTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGC...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CAA 90 bp | TTCAGCCCAGTGGTCTCCACAATGCTCCCATCTGTGTGTACAACTATTAGTGTGCCAGGCCCAGCTGTTTaGCCGCCGAGTCCGAGTCCT | + |
Preference number: 5 (lower is better) Translates to: FSPVVSTMLPSVCTTISVPGPAV*PPSPSP Trigger: AGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTGG...CACACTAATAGTTGTACACACAGATGGGAGCATTGTGGAGACCACTGGGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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CDS-3UTR CAA 90 bp | AACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTC | + |
Preference number: 5 (lower is better) Translates to: NLSGKFPMAPLLSSPHSHTEGSQ*YLVPPF Trigger: GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGT...ATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CAA 90 bp | ACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGCAGGGTGATGTTCTaGGGGGAATCCTTCTTCACT | + |
Preference number: 5 (lower is better) Translates to: TCPASFPWPLFSAAPTVISRVMF*GESFFT Trigger: AGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCT...GATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000080553.9 |
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CDS-3UTR CAA 90 bp | AACGACTCCATGGAGAGTGTTGGGAGGCCACAGCAGCTGCCCCAACCCAGACCCGATGTCAGGACAATTTaGGGGTGTGATGTTGGCAAT | + |
Preference number: 5 (lower is better) Translates to: NDSMESVGRPQQLPQPRPDVRTI*GCDVGN Trigger: ATTGCCAACATCACACCCCAAAATTGTCCTGACATC...GGGTCTGGGTTGGGGCAGCTGCTGTGGCCTCCCAACACTCTCCATGGAGTCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CAA 90 bp | ACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCGTGTTGAGTAGGGAGTaGACCATCTCTTCCAGGTAC | + |
Preference number: 5 (lower is better) Translates to: TCPASFPWPLFSAAPTVIVLSRE*TISSRY Trigger: GTACCTGGAAGAGATGGTCAACTCCCTACTCAACAC...GATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CAA 90 bp | TGTTGGCAATGCAGCTTCTGGAAACGGGGCAATCTGGCAGCTGTCCTGATAGCCACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTC | + |
Preference number: 5 (lower is better) Translates to: CWQCSFWKRGNLAAVLIATEGSQ*YLVPPF Trigger: GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGT...GGCTATCAGGACAGCTGCCAGATTGCCCCGTTTCCAGAAGCTGCATTGCCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CAA 90 bp | TCCGGCAAGTTTCCCATGGCCCCTCTTCTCAGCAGCCCCCACAGTCATCAGAGGGATGTCAGGACAATTTaGGGGTGTGATGTTGGCAAT | + |
Preference number: 5 (lower is better) Translates to: SGKFPMAPLLSSPHSHQRDVRTI*GCDVGN Trigger: ATTGCCAACATCACACCCCAAAATTGTCCTGACATC...CCTCTGATGACTGTGGGGGCTGCTGAGAAGAGGGGCCATGGGAAACTTGCCGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS CCA 90 bp | TTGACACATGACTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTGCAAGAGCTCGCCTGCTTGGCTTGT | + |
Preference number: 5 (lower is better) Translates to: LTHDSFLSVSTCILA*VTAASLQELACLAC Trigger: ACAAGCCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CAA 90 bp | TGTTTATTAACAGATAAGACAGGTATGTACACGTGGCATAGGGCACCCCAAGGGGCAGAGGACCCCACGTaGGCCACAGTCACTGTGGTC | + |
Preference number: 5 (lower is better) Translates to: CLLTDKTGMYTWHRAPQGAEDPT*ATVTVV Trigger: GACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGC...CCCTTGGGGTGCCCTATGCCACGTGTACATACCTGTCTTATCTGTTAATAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CAA 90 bp | AGTGGCCTCTACAGTGGATGCTCTGTCAAAGGTCAGTGCTCCAGAGGTAGTGATGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGG | + |
Preference number: 5 (lower is better) Translates to: SGLYSGCSVKGQCSRGSDGSQLY*VPPFSW Trigger: CCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCC...ATCACTACCTCTGGAGCACTGACCTTTGACAGAGCATCCACTGTAGAGGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CAA 90 bp | GCGCTGGCAGAACGTAGAGCAGTAGTTAACCTTGTGGCAGCCGGTACACTCACTGTGTTGAGTAGGGAGTaGACCATCTCTTCCAGGTAC | + |
Preference number: 5 (lower is better) Translates to: ALAERRAVVNLVAAGTLTVLSRE*TISSRY Trigger: GTACCTGGAAGAGATGGTCAACTCCCTACTCAACAC...AGTGAGTGTACCGGCTGCCACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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CDS TCA 90 bp | CGCACCATCACCGTGCCTAACCTTTTGCCTGTGCCTTTTTATCCCTaGTCGGGTGTGTTCCTCTTTCCTCTCTGTATCAACCTGCATTCT | + |
Preference number: 5 (lower is better) Translates to: RTITVPNLLPVPFYP*SGVFLFPLCINLHS Trigger: AGAATGCAGGTTGATACAGAGAGGAAAGAGGAACACACCCGATCAGGGATAAAAAGGCACAGGCAAAAGGTTAGGCACGGTGATGGTGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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CDS-3UTR CAA 90 bp | CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACCCAGGCCCAGCTGTTTaGCCGCCGAGTCCGAGTCCT | + |
Preference number: 5 (lower is better) Translates to: LYMEFYSSLIYMKPCLKDPGPAV*PPSPSP Trigger: AGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTGG...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CAA 90 bp | CGTTCCTTGGTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGG | + |
Preference number: 5 (lower is better) Translates to: RSLVSGRSLFPRAQSVNNGSQLY*VPPFSW Trigger: CCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCC...GTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGACCAAGGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CAA 90 bp | GTTCTTGGGGGAATCCTTCTTCACTGGAGTTGTGGGCAGCTCATTCTCTTTCTTACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTC | + |
Preference number: 5 (lower is better) Translates to: VLGGILLHWSCGQLILFLTEGSQ*YLVPPF Trigger: GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGT...AAGAAAGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 |
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CDS-3UTR CAA 90 bp | TTCCAAGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCGTGTTGAGTAGGGAGTaGACCATCTCTTCCAGGTAC | + |
Preference number: 5 (lower is better) Translates to: FQGHNLLITCPASFPWPLVLSRE*TISSRY Trigger: GTACCTGGAAGAGATGGTCAACTCCCTACTCAACAC...GAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CAA 90 bp | CAATTTAATAGGGCACAAGGAACAGAAACGACTCCATGGAGAGTGTTGGGAGGCAGCAGGGTGATGTTCTaGGGGGAATCCTTCTTCACT | + |
Preference number: 5 (lower is better) Translates to: QFNRAQGTETTPWRVLGGSRVMF*GESFFT Trigger: AGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCT...GCCTCCCAACACTCTCCATGGAGTCGTTTCTGTTCCTTGTGCCCTATTAAATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CAA 90 bp | AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGGTGGGAGAGACAGCTTaGGTGGGGGTGGACGGTGGC | + |
Preference number: 5 (lower is better) Translates to: NVMRFVLPSPILDYFVLEVGETA*VGVDGG Trigger: GCCACCGTCCACCCCCACCAAAGCTGTCTCTCCCAC...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CAA 90 bp | TCCTTGGTCTCTGGAAGGAGCTTGTTTCCAAGGGCACAATCTGTTAATAACTTGACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTC | + |
Preference number: 5 (lower is better) Translates to: SLVSGRSLFPRAQSVNNLTEGSQ*YLVPPF Trigger: GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGT...CAAGTTATTAACAGATTGTGCCCTTGGAAACAAGCTCCTTCCAGAGACCAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 |
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CDS-3UTR CAA 90 bp | AGGGCACAATCTGTTAATAACTTGTCCGGCAAGTTTCCCATGGCCCCTCTTCTCGATGTCAGGACAATTTaGGGGTGTGATGTTGGCAAT | + |
Preference number: 5 (lower is better) Translates to: RAQSVNNLSGKFPMAPLLDVRTI*GCDVGN Trigger: ATTGCCAACATCACACCCCAAAATTGTCCTGACATC...GAGAAGAGGGGCCATGGGAAACTTGCCGGACAAGTTATTAACAGATTGTGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080553.9 ENSMUST00000209600.2 |
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CDS-3UTR CAA 90 bp | AGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATCAGCCTGGACAGTGCTCGCCTGCTTGGCTaGTTCAAACAGCGTCTTCAG | + |
Preference number: 5 (lower is better) Translates to: SNFFYHTFFNMDVISLDSARLLG*FKQRLQ Trigger: CTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGC...ACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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CDS-3UTR CAA 90 bp | CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACCTGCACACCTGCCTCTaGCACTGTGGCTCCTGCAAA | + |
Preference number: 5 (lower is better) Translates to: LYMEFYSSLIYMKPCLKDLHTCL*HCGSCK Trigger: TTTGCAGGAGCCACAGTGCAAGAGGCAGGTGTGCAG...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CAA 90 bp | GCCTGGCTCAAACAGCAACTTTTTCTATCACACTTTCTTCAACATGGACGTCATACCGTGCCTAACCTTTaGCCTGTGCCTTTTTATCCC | + |
Preference number: 5 (lower is better) Translates to: AWLKQQLFLSHFLQHGRHTVPNL*PVPFYP Trigger: GGGATAAAAAGGCACAGGCAAAAGGTTAGGCACGGT...ATGACGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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CDS-3UTR CAA 90 bp | AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGGGGTCCCAGTTGTACTaGGTACCACCTTTCTCCTGG | + |
Preference number: 5 (lower is better) Translates to: NVMRFVLPSPILDYFVLEGSQLY*VPPFSW Trigger: CCAGGAGAAAGGTGGTACCAAGTACAACTGGGACCC...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CAA 90 bp | AATGTCATGAGATTTGTTTTGCCCTCCCCAATACTTGATTATTTCGTTCTTGAGACCGAAGGGTCCCAGTaGTACTTGGTACCACCTTTC | + |
Preference number: 5 (lower is better) Translates to: NVMRFVLPSPILDYFVLETEGSQ*YLVPPF Trigger: GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGT...CTCAAGAACGAAATAATCAAGTATTGGGGAGGGCAAAACAAATCTCATGACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS-3UTR CAA 90 bp | CTATATATGGAGTTCTACAGCAGCCTGATATATATGAAACCCTGTCTCAAAGACGTGTTGAGTAGGGAGTaGACCATCTCTTCCAGGTAC | + |
Preference number: 5 (lower is better) Translates to: LYMEFYSSLIYMKPCLKDVLSRE*TISSRY Trigger: GTACCTGGAAGAGATGGTCAACTCCCTACTCAACAC...GTCTTTGAGACAGGGTTTCATATATATCAGGCTGCTGTAGAACTCCATATATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS CCA 72 bp | CGAAGGCGGCGGCGGCGGCGGCGGCCTCATCGGGGCTaGGCAGAGCCTCGGTACCCATATCCATGTGCCCAG | + |
Preference number: 6 (lower is better) Translates to: RRRRRRRRPHRG*AEPRYPYPCAQ Trigger: CTGGGCACATGGATATGGGTACCGAGGCTCTGCCCAGCCCCGATGAGGCCGCCGCCGCCGCCGCCGCCTTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209608.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS TCA 72 bp | TGTGCCCAGATTCGGCCGCCATCACCGCCACAGCGGTaGCCCGCCGCGTCTCGCGCTCCGCCTCGGAGTCTG | + |
Preference number: 6 (lower is better) Translates to: CAQIRPPSPPQR*PAASRAPPRSL Trigger: CAGACTCCGAGGCGGAGCGCGAGACGCGGCGGGTCACCGCTGTGGCGGTGATGGCGGCCGAATCTGGGCACA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209608.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS GCA 72 bp | GGACCCCACGTTGGCCACAGTCACTGTGGTCACTTCTaGGAAGGCGGCGGCGGCGGCGGCGGCCTCATCGGG | + |
Preference number: 6 (lower is better) Translates to: GPHVGHSHCGHF*EGGGGGGGLIG Trigger: CCCGATGAGGCCGCCGCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS GCA 72 bp | GTCTCCATGACATCCTTCCCCAGAAACTCTTCCTCCTaGGAAGGCGGCGGCGGCGGCGGCGGCCTCATCGGG | + |
Preference number: 6 (lower is better) Translates to: VSMTSFPRNSSS*EGGGGGGGLIG Trigger: CCCGATGAGGCCGCCGCCGCCGCCGCCGCCTTCGCAGGAGGAAGAGTTTCTGGGGAAGGATGTCATGGAGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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CDS CCA 72 bp | TATCTGCAGAGGACCCCACGTTGGCCACAGTCACTGTaGTCACTTCTGCGAAGGCGGCGGCGGCGGCGGCGG | + |
Preference number: 6 (lower is better) Translates to: YLQRTPRWPQSL*SLLRRRRRRRR Trigger: CCGCCGCCGCCGCCGCCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGCAGATA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080553.9 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS GCA 72 bp | TCGGGGCTGGGCAGAGCCTCGGTACCCATATCCATGTaGCCAGATTCGGCCGCCATCACCGCCACAGCGGTG | + |
Preference number: 6 (lower is better) Translates to: SGLGRASVPISM*PDSAAITATAV Trigger: CACCGCTGTGGCGGTGATGGCGGCCGAATCTGGGCACATGGATATGGGTACCGAGGCTCTGCCCAGCCCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209608.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS GCA 72 bp | CCTCGGAGTCTGCGTCCTCCTCCGAGTCCTCGTCTCTaGTTAACACCGGCTCCTCCGCCTCGCTTTCCGCTG | + |
Preference number: 6 (lower is better) Translates to: PRSLRPPPSPRL*LTPAPPPRFPL Trigger: CAGCGGAAAGCGAGGCGGAGGAGCCGGTGTTAAGCAGAGACGAGGACTCGGAGGAGGACGCAGACTCCGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209608.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS GCA 72 bp | GCTTCAAACTCAGTTGGGCTGTACCAGTTTTCTCCCTaGTTGATACACCGGCCCCGGCCACCTGAGCCGAGC | + |
Preference number: 6 (lower is better) Translates to: ASNSVGLYQFSP*LIHRPRPPEPS Trigger: GCTCGGCTCAGGTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTACAGCCCAACTGAGTTTGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS CCA 72 bp | ATAACCCTGAAGGCAGCGTTCTGCCCCGCAGGTGCTTaGAGTGAGTCCACCTGCCTAGGCACCTATCCAGGA | + |
Preference number: 6 (lower is better) Translates to: ITLKAAFCPAGA*SESTCLGTYPG Trigger: TCCTGGATAGGTGCCTAGGCAGGTGGACTCACTCCAAGCACCTGCGGGGCAGAACGCTGCCTTCAGGGTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS TCA 72 bp | CACCTGAGCCGAGCCTACTCTTGTAGAGCGTGCCACTaGTGTTCCGACAGCGCACAGGCAACTCGCTGTCAT | + |
Preference number: 6 (lower is better) Translates to: HLSRAYSCRACH*CSDSAQATRCH Trigger: ATGACAGCGAGTTGCCTGTGCGCTGTCGGAACATCAGTGGCACGCTCTACAAGAGTAGGCTCGGCTCAGGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS CAA 72 bp | TCAAACTCAGTTGGGCTGTACCAGTTTTCTCCCTGCTaGATACACCGGCCCCGGCCACCTGAGCCGAGCCTA | + |
Preference number: 6 (lower is better) Translates to: SNSVGLYQFSPC*IHRPRPPEPSL Trigger: TAGGCTCGGCTCAGGTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAAACTGGTACAGCCCAACTGAGTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS CAA 90 bp | ACCTTGTGGCAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTaGACACATGACTCTTTCCTCTCTGTATCAACCTGCATTCTCGCC | + |
Preference number: 6 (lower is better) Translates to: TLWQPVHSLMASRPQ*THDSFLSVSTCILA Trigger: GGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTGCCACAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS CCA 72 bp | GACTCTTTCCTCTCTGTATCAACCTGCATTCTCGCCTaGGTCACAGCAGCTTCCCTGCAAGAGCTCGCCTGC | + |
Preference number: 6 (lower is better) Translates to: DSFLSVSTCILA*VTAASLQELAC Trigger: GCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS CAA 72 bp | CAGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTaGACACATGACTCTTTCCTCTCTGTATCAACCTGC | + |
Preference number: 6 (lower is better) Translates to: QPVHSLMASRPQ*THDSFLSVSTC Trigger: GCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS TCA 72 bp | AGCCGGTACACTCACTCATGGCCTCCCGGCCGCAGTTaGCACATGACTCTTTCCTCTCTGTATCAACCTGCA | + |
Preference number: 6 (lower is better) Translates to: SRYTHSWPPGRS*HMTLSSLYQPA Trigger: TGCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGTACCGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS TCA 72 bp | ACACTCACTCATGGCCTCCCGGCCGCAGTTGACACATaGCTCTTTCCTCTCTGTATCAACCTGCATTCTCGC | + |
Preference number: 6 (lower is better) Translates to: TLTHGLPAAVDT*LFPLCINLHSR Trigger: GCGAGAATGCAGGTTGATACAGAGAGGAAAGAGTCATGTGTCAACTGCGGCCGGGAGGCCATGAGTGAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211537.2 |
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CDS GCA 72 bp | GATCGGGTGTGTTCCTCTTTCCTCTCTGTATCAACCTaGATTCTCGCCTGGGTCACAGCAGCTTCCCTGCAA | + |
Preference number: 6 (lower is better) Translates to: DRVCSSFLSVST*ILAWVTAASLQ Trigger: TTGCAGGGAAGCTGCTGTGACCCAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGGAACACACCCGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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CDS GCA 72 bp | GTGTGCGCACCATCACCGTGCCTAACCTTTTGCCTGTaGCTTTTTATCCCTGATCGGGTGTGTTCCTCTTTC | + |
Preference number: 6 (lower is better) Translates to: VCAPSPCLTFCL*LFIPDRVCSSF Trigger: GAAAGAGGAACACACCCGATCAGGGATAAAAAGGCACAGGCAAAAGGTTAGGCACGGTGATGGTGCGCACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |
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CDS CCA 72 bp | GCTGCTGGCTCTTCCTGCCATAGCTTCAAACTCAGTTaGGCTGTACCAGTTTTCTCCCTGCTTGATACACCG | + |
Preference number: 6 (lower is better) Translates to: AAGSSCHSFKLS*AVPVFSLLDTP Trigger: CGGTGTATCAAGCAGGGAGAAAACTGGTACAGCCCAACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080553.9 ENSMUST00000209397.2 ENSMUST00000210062.2 ENSMUST00000210830.2 ENSMUST00000211537.2 |
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CDS TCA 72 bp | ATCCTACAGTCTTGTGTCCACTGTCTGAGGTCTCCATaGCATCCTTCCCCAGAAACTCTTCCTCCTGCGAAG | + |
Preference number: 6 (lower is better) Translates to: ILQSCVHCLRSP*HPSPETLPPAK Trigger: CTTCGCAGGAGGAAGAGTTTCTGGGGAAGGATGTCATGGAGACCTCAGACAGTGGACACAAGACTGTAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209608.2 |
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CDS TCA 72 bp | ACCGTGCCTAACCTTTTGCCTGTGCCTTTTTATCCCTaGTCGGGTGTGTTCCTCTTTCCTCTCTGTATCAAC | + |
Preference number: 6 (lower is better) Translates to: TVPNLLPVPFYP*SGVFLFPLCIN Trigger: GTTGATACAGAGAGGAAAGAGGAACACACCCGATCAGGGATAAAAAGGCACAGGCAAAAGGTTAGGCACGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211146.2 |