Pregenerated sensors for DDX6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032097Ensembl transcript IDs: ENSMUST00000170489.2, ENSMUST00000217034.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCACACACAACAGGAGGGGCCGCGGATAACTAGGCTCCACAACTaGCAAGCCCGCCGAGGCTGCACTGGCTGGTCCGGTGACATAAAA | + |
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Preference number: 1 (lower is better) Translates to: AHTQQEGPRITRLHN*QARRGCTGWSGDIK Trigger: TTTTATGTCACCGGACCAGCCAGTGCAGCCTCGGCGGGCTTGGCAGTTGTGGAGCCTAGTTATCCGCGGCCCCTCCTGTTGTGTGTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR GCA 90 bp | GAGCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTaGAAAGCTCCTTTGCTGTCTGCTAAGACCGCTGCCTGTGCATTC | + |
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Preference number: 1 (lower is better) Translates to: EPNHRASQSPQGPQP*KAPLLSAKTAACAF Trigger: GAATGCACAGGCAGCGGTCTTAGCAGACAGCAAAGGAGCTTTGCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR GCA 90 bp | GAGGCATGTGGCACCTGGCAGAGCAGTCCAAGGTTGGCAAGAGACTaGACTTTGTTGATCACCCACTTGCCCTCTGGCGAGACAGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: EACGTWQSSPRLARD*TLLITHLPSGETAD Trigger: ATCTGCTGTCTCGCCAGAGGGCAAGTGGGTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCAGGTGCCACATGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR GCA 90 bp | GAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCAAAGCTCCTTTaGTGTCTGCTAAGACCGCTGCCTGTGCATTCATTACAAGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: ELLKAPRDHSLAKLL*CLLRPLPVHSLQEQ Trigger: CTGCTCTTGTAATGAATGCACAGGCAGCGGTCTTAGCAGACAGCAAAGGAGCTTTGCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR TCA 90 bp | AGGAAAATGGCGCTGCCATCACTAGTCCACCTTCCGGCCCTGGGCTaGGTACTGGTAGAACAGGAGGTGAGACTTCAACGTGAAACCAAA | + |
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Preference number: 1 (lower is better) Translates to: RKMALPSLVHLPALG*VLVEQEVRLQRETK Trigger: TTTGGTTTCACGTTGAAGTCTCACCTCCTGTTCTACCAGTACTCAGCCCAGGGCCGGAAGGTGGACTAGTGATGGCAGCGCCATTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR GCA 90 bp | ACTTGCCCTCTGGCGAGACAGCAGATTGCATTTGTACTCCTTTCCTaGTCATGTTGCTCTACGGAGCGATCCCTCATCTCGCCAAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: TCPLARQQIAFVLLS*SCCSTERSLISPKA Trigger: TGCCTTTGGCGAGATGAGGGATCGCTCCGTAGAGCAACATGAGCAGGAAAGGAGTACAAATGCAATCTGCTGTCTCGCCAGAGGGCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR GCA 90 bp | TACGGAGCGATCCCTCATCTCGCCAAAGGCAGGAAGGAGGAGAGCTaGATCGGTACAAGGGCAAGATCTGTTGGTCAAAATAACGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: YGAIPHLAKGRKEES*IGTRARSVGQNNEF Trigger: AAACTCGTTATTTTGACCAACAGATCTTGCCCTTGTACCGATGCAGCTCTCCTCCTTCCTGCCTTTGGCGAGATGAGGGATCGCTCCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR GCA 90 bp | ACACTTGACTGGACTTGCCTTTGGGGATTTGTACCGTGCAGCTCCTaGTACAGTTGTTACAGAGTCAGGGTTATCTCTGATAAGGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: TLDWTCLWGFVPCSS*YSCYRVRVISDKEA Trigger: TGCCTCCTTATCAGAGATAACCCTGACTCTGTAACAACTGTAGCAGGAGCTGCACGGTACAAATCCCCAAAGGCAAGTCCAGTCAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR CCA 90 bp | AAGGTTGGCAAGAGACTGCACTTTGTTGATCACCCACTTGCCCTCTaGCGAGACAGCAGATTGCATTTGTACTCCTTTCCTGCTCATGTT | + |
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Preference number: 1 (lower is better) Translates to: KVGKRLHFVDHPLAL*RDSRLHLYSFPAHV Trigger: AACATGAGCAGGAAAGGAGTACAAATGCAATCTGCTGTCTCGCCAGAGGGCAAGTGGGTGATCAACAAAGTGCAGTCTCTTGCCAACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR GCA 90 bp | TGTACACTTCTCACACTCCAAGGAAGATTTATCTTTGTTCCCCTTTaGAGAACTTGGGAAGTTCCTCAAACGTTTAGGACAGGAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: CTLLTLQGRFIFVPL*RTWEVPQTFRTGEP Trigger: TGGCTCTCCTGTCCTAAACGTTTGAGGAACTTCCCAAGTTCTGCAAAGGGGAACAAAGATAAATCTTCCTTGGAGTGTGAGAAGTGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR TCA 90 bp | AGTTTTGCTTTAGAACTAGGCAAAGTCAAAGCAACTTTGAATAACTaGCTCCTCTCTTCAGACGAGTTAAGCATGGAAGCAGACTCAACA | + |
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Preference number: 1 (lower is better) Translates to: SFALELGKVKATLNN*LLSSDELSMEADST Trigger: TGTTGAGTCTGCTTCCATGCTTAACTCGTCTGAAGAGAGGAGTCAGTTATTCAAAGTTGCTTTGACTTTGCCTAGTTCTAAAGCAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGAGCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCGTGTGGCCGGGCTTCTaGCCCCTTTCCAACACAGAG | + |
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Preference number: 2 (lower is better) Translates to: TGEPNHRASQSPQGPQPCVWPGF*PLSNTE Trigger: CTCTGTGTTGGAAAGGGGCCAGAAGCCCGGCCACAC...GCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGCTCTCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGAGAGCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCCCTGCAGTGAGAGGCTaGTCTTTCCTTTGGGAGCGA | + |
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Preference number: 2 (lower is better) Translates to: TGEPNHRASQSPQGPQPCPAVRG*SFLWER Trigger: TCGCTCCCAAAGGAAAGAGCAGCCTCTCACTGCAGG...GCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGCTCTCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCAAAGCTCCATCTGGCTCCTGCAGTaGGAGGCTGCTCTTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: AKPQSFSKPPGTTALQSSIWLLQ*EAALSF Trigger: AAAGGAAAGAGCAGCCTCTCACTGCAGGAGCCAGAT...GGAGCTTTGCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | TCTACGGAGCGATCCCTCATCTCGCCAAAGGCAGGAAGGAGGAGAGCTGCATCGCAGGGACCACAGCCTTaGAAAGCTCCTTTGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: STERSLISPKAGRRRAASQGPQP*KAPLLS Trigger: AGACAGCAAAGGAGCTTTGCAAGGCTGTGGTCCCTG...CGATGCAGCTCTCCTCCTTCCTGCCTTTGGCGAGATGAGGGATCGCTCCGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCAAAGCTCCTTGTCATCTGGCTCCTaGAGTGAGAGGCTGCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: AKPQSFSKPPGTTALQSSLSSGS*SERLLF Trigger: AAAGAGCAGCCTCTCACTGCAGGAGCCAGATGACAA...GGAGCTTTGCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGAACTAGGCTCCACAACTaGCAAGCCCGCCGAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: FPTCHSKLCAVLCSHRARTRLHN*QARRGC Trigger: GCAGCCTCGGCGGGCTTGGCAGTTGTGGAGCCTAGT...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTGTGTGGCCGGGCTTCTaGCCCCTTTCCAACACAGAG | + |
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Preference number: 2 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIVWPGF*PLSNTE Trigger: CTCTGTGTTGGAAAGGGGCCAGAAGCCCGGCCACAC...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTATAGGCAGAGGGCGCTaGTCACACACAACAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIIGRGR*SHTTGG Trigger: CCCTCCTGTTGTGTGTGAGCAGCGCCCTCTGCCTAT...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCACCTGGCAGAGCAGTCCAAGGTTGGCAAGAGACTGCACTTTGTTGATCACATTACAAGAGCAGTGTaGCCGGGCTTCTGGCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: WHLAEQSKVGKRLHFVDHITRAV*PGFWPL Trigger: AAGGGGCCAGAAGCCCGGCCACACTGCTCTTGTAAT...GTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCAGGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR CAA 90 bp | AGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCAAAGCTCCTTaGCTGTCTGCTAAGACCGCTGCCTGTGCATTCATTACAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: RASQSPQGPQPCKAP*LSAKTAACAFITRA Trigger: TGCTCTTGTAATGAATGCACAGGCAGCGGTCTTAGCAGACAGCAAAGGAGCTTTGCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCAAAGCTCCGGTGAGACTTCAACGTaGAACCAAAATGAAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: AKPQSFSKPPGTTALQSSGETST*NQNEEA Trigger: TGCCTCTTCATTTTGGTTTCACGTTGAAGTCTCACC...GGAGCTTTGCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR TCA 90 bp | TCTACGGAGCGATCCCTCATCTCGCCAAAGGCAGGAAGGAGGAGAGCTGCATCGGCAACTTTGAATAACTaGCTCCTCTCTTCAGACGAG | + |
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Preference number: 2 (lower is better) Translates to: STERSLISPKAGRRRAASATLNN*LLSSDE Trigger: CTCGTCTGAAGAGAGGAGTCAGTTATTCAAAGTTGC...CGATGCAGCTCTCCTCCTTCCTGCCTTTGGCGAGATGAGGGATCGCTCCGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGGAAAGAAGGTCAAGGCTCCCTCCGACAAGTCTTTACAGCGAGTGCCTTCCTGCAGTGAGAGGCTaGTCTTTCCTTTGGGAGCGA | + |
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Preference number: 2 (lower is better) Translates to: TEERRSRLPPTSLYSECLPAVRG*SFLWER Trigger: TCGCTCCCAAAGGAAAGAGCAGCCTCTCACTGCAGG...AAGGCACTCGCTGTAAAGACTTGTCGGAGGGAGCCTTGACCTTCTTTCCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCACCTGGCAGAGCAGTCCAAGGTTGGCAAGAGACTGCACTTTGTTGATCACGCCAGCGTAGTGTTCTaGTGTAGAGCACAGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: WHLAEQSKVGKRLHFVDHASVVF*CRAQRL Trigger: AAGCCTCTGTGCTCTACAGCAGAACACTACGCTGGC...GTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCAGGTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGAATAGGCAGAGGGCGCTaGTCACACACAACAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: FPTCHSKLCAVLCSHRARIGRGR*SHTTGG Trigger: CCCTCCTGTTGTGTGTGAGCAGCGCCCTCTGCCTAT...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGAAAGAAGGTCAAGGCTCCCTCCGACAAGTCTTTACAGCGAGTGCCTTGGCTGCTCTTTCCTTTaGGAGCGACGATGGTACGTC | + |
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Preference number: 2 (lower is better) Translates to: TEERRSRLPPTSLYSECLGCSFL*ERRWYV Trigger: GACGTACCATCGTCGCTCCCAAAGGAAAGAGCAGCC...AAGGCACTCGCTGTAAAGACTTGTCGGAGGGAGCCTTGACCTTCTTTCCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTGGCTGCTCTTTCCTTTaGGAGCGACGATGGTACGTC | + |
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Preference number: 2 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIGCSFL*ERRWYV Trigger: GACGTACCATCGTCGCTCCCAAAGGAAAGAGCAGCC...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTGAGACTGCACTTTGTTaGTCACCCACTTGCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIETALC*SPTCPL Trigger: CAGAGGGCAAGTGGGTGATCAACAAAGTGCAGTCTC...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | TCTACGGAGCGATCCCTCATCTCGCCAAAGGCAGGAAGGAGGAGAGCTGCATCGATCTTTGTTCCCCTTTaGAGAACTTGGGAAGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: STERSLISPKAGRRRAASIFVPL*RTWEVP Trigger: AGGAACTTCCCAAGTTCTGCAAAGGGGAACAAAGAT...CGATGCAGCTCTCCTCCTTCCTGCCTTTGGCGAGATGAGGGATCGCTCCGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCACCTGGCAGAGCAGTCCAAGGTTGGCAAGAGACTGCACTTTGTTGATCACGTACCGTGCAGCTCCTaGTACAGTTGTTACAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: WHLAEQSKVGKRLHFVDHVPCSS*YSCYRV Trigger: GACTCTGTAACAACTGTAGCAGGAGCTGCACGGTAC...GTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCAGGTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGAATTACAAGAGCAGTGTaGCCGGGCTTCTGGCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: FPTCHSKLCAVLCSHRARITRAV*PGFWPL Trigger: AAGGGGCCAGAAGCCCGGCCACACTGCTCTTGTAAT...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGAATCTGGCTCCTGCAGTaGGAGGCTGCTCTTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: FPTCHSKLCAVLCSHRARIWLLQ*EAALSF Trigger: AAAGGAAAGAGCAGCCTCTCACTGCAGGAGCCAGAT...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGAGAGACTGCACTTTGTTaGTCACCCACTTGCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FPTCHSKLCAVLCSHRARETALC*SPTCPL Trigger: CAGAGGGCAAGTGGGTGATCAACAAAGTGCAGTCTC...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTTTGTCATCTGGCTCCTaGAGTGAGAGGCTGCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: HPTGPTNCYDAGAHLEIILSSGS*SERLLF Trigger: AAAGAGCAGCCTCTCACTGCAGGAGCCAGATGACAA...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTCTTGCAAAGCTCCTTTaGTGTCTGCTAAGACCGCTG | + |
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Preference number: 2 (lower is better) Translates to: HPTGPTNCYDAGAHLEIILAKLL*CLLRPL Trigger: CAGCGGTCTTAGCAGACAGCAAAGGAGCTTTGCAAG...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGACAGGGACCACAGCCTTaGAAAGCTCCTTTGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: FPTCHSKLCAVLCSHRARQGPQP*KAPLLS Trigger: AGACAGCAAAGGAGCTTTGCAAGGCTGTGGTCCCTG...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTTGGGGATTTGTACCGTaGAGCTCCTGCTACAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIWGFVP*SSCYSC Trigger: ACAACTGTAGCAGGAGCTGCACGGTACAAATCCCCA...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR CCA 90 bp | TCTACGGAGCGATCCCTCATCTCGCCAAAGGCAGGAAGGAGGAGAGCTGCATCGACTCTGTTGATTCCTTaGGCTGTGTGTAAAGATGAT | + |
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Preference number: 2 (lower is better) Translates to: STERSLISPKAGRRRAASTLLIP*AVCKDD Trigger: ATCATCTTTACACACAGCCCAAGGAATCAACAGAGT...CGATGCAGCTCTCCTCCTTCCTGCCTTTGGCGAGATGAGGGATCGCTCCGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGAGCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCACTCTGTTGATTCCTTaGGCTGTGTGTAAAGATGAT | + |
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Preference number: 2 (lower is better) Translates to: TGEPNHRASQSPQGPQPCTLLIP*AVCKDD Trigger: ATCATCTTTACACACAGCCCAAGGAATCAACAGAGT...GCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGCTCTCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCAAAGCTCCTATGTACAGTGTGGATaGACTGCAGTTGTGAATCAA | + |
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Preference number: 2 (lower is better) Translates to: AKPQSFSKPPGTTALQSSYVQCG*TAVVNQ Trigger: TTGATTCACAACTGCAGTCCATCCACACTGTACATA...GGAGCTTTGCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGAAACCAGGGTTTGACCTaGTCAGTAGGGCATCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: FPTCHSKLCAVLCSHRARNQGLT*SVGHLP Trigger: GGGAAGATGCCCTACTGACCAGGTCAAACCCTGGTT...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGAGTACCGTGCAGCTCCTaGTACAGTTGTTACAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: FPTCHSKLCAVLCSHRARVPCSS*YSCYRV Trigger: GACTCTGTAACAACTGTAGCAGGAGCTGCACGGTAC...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTGCAACTTTGAATAACTaGCTCCTCTCTTCAGACGAG | + |
|
Preference number: 2 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIATLNN*LLSSDE Trigger: CTCGTCTGAAGAGAGGAGTCAGTTATTCAAAGTTGC...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR GCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTTTTGTACTCCTTTCCTaGTCATGTTGCTCTACGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIFVLLS*SCCSTE Trigger: CTCCGTAGAGCAACATGAGCAGGAAAGGAGTACAAA...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTCCCCTTTGCAGAACTTaGGAAGTTCCTCAAACGTTT | + |
|
Preference number: 2 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIPLCRT*EVPQTF Trigger: AAACGTTTGAGGAACTTCCCAAGTTCTGCAAAGGGG...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR CAA 90 bp | GGTTTGTTTTGTAGCCAACACTTGACTGGACTTGCCTTTGGGGATTaGTACCGTGCAGCTCCTGCTACAGTTGTTACAGAGTCAGGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: GLFCSQHLTGLAFGD*YRAAPATVVTESGL Trigger: TAACCCTGACTCTGTAACAACTGTAGCAGGAGCTGCACGGTACAAATCCCCAAAGGCAAGTCCAGTCAAGTGTTGGCTACAAAACAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGAGGTGAGACTTCAACGTaGAACCAAAATGAAGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: FPTCHSKLCAVLCSHRARGETST*NQNEEA Trigger: TGCCTCTTCATTTTGGTTTCACGTTGAAGTCTCACC...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCACCTGGCAGAGCAGTCCAAGGTTGGCAAGAGACTGCACTTTGTTGATCACTATGTACAGTGTGGATaGACTGCAGTTGTGAATCAA | + |
|
Preference number: 2 (lower is better) Translates to: WHLAEQSKVGKRLHFVDHYVQCG*TAVVNQ Trigger: TTGATTCACAACTGCAGTCCATCCACACTGTACATA...GTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCAGGTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGGAAAGAAGGTCAAGGCTCCCTCCGACAAGTCTTTACAGCGAGTGCCTTCATGTATGTACAGTGTaGATGGACTGCAGTTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: TEERRSRLPPTSLYSECLHVCTV*MDCSCE Trigger: TTCACAACTGCAGTCCATCCACACTGTACATACATG...AAGGCACTCGCTGTAAAGACTTGTCGGAGGGAGCCTTGACCTTCTTTCCTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGACCCCTTTGCAGAACTTaGGAAGTTCCTCAAACGTTT | + |
|
Preference number: 2 (lower is better) Translates to: FPTCHSKLCAVLCSHRARPLCRT*EVPQTF Trigger: AAACGTTTGAGGAACTTCCCAAGTTCTGCAAAGGGG...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR TCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTAAAAAGTTCACTGGTTaGTTCATCTCCCTCCTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIKKFTG*FISLLL Trigger: CAAAAGGAGGGAGATGAATCAACCAGTGAACTTTTT...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR CAA 90 bp | AGACTGCACTCTGTACACTTCTCACACTCCAAGGAAGATTTATCTTaGTTCCCCTTTGCAGAACTTGGGAAGTTCCTCAAACGTTTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RLHSVHFSHSKEDLS*FPFAELGKFLKRLG Trigger: TCCTAAACGTTTGAGGAACTTCCCAAGTTCTGCAAAGGGGAACAAAGATAAATCTTCCTTGGAGTGTGAGAAGTGTACAGAGTGCAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR GCA 72 bp | CAACAGGAGGGGCCGCGGATAACTAGGCTCCACAACTaGCAAGCCCGCCGAGGCTGCACTGGCTGGTCCGGT | + |
|
Preference number: 3 (lower is better) Translates to: QQEGPRITRLHN*QARRGCTGWSG Trigger: ACCGGACCAGCCAGTGCAGCCTCGGCGGGCTTGGCAGTTGTGGAGCCTAGTTATCCGCGGCCCCTCCTGTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR GCA 72 bp | ACAGCGATCTCCGGGGTGGGTGCCCAGCTGTCCAAGTaGCACCCTCAGCAGAGGCTGTACTTCAGAACACTC | + |
|
Preference number: 3 (lower is better) Translates to: TAISGVGAQLSK*HPQQRLYFRTL Trigger: GAGTGTTCTGAAGTACAGCCTCTGCTGAGGGTGGCACTTGGACAGCTGGGCACCCACCCCGGAGATCGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR TCA 72 bp | CTGCCAAGCCCGCCGAGGCTGCACTGGCTGGTCCGGTaGCATAAAAATCCATGCTCCACACACTCTCCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LPSPPRLHWLVR*HKNPCSTHSPL Trigger: TAGAGGAGAGTGTGTGGAGCATGGATTTTTATGTCACCGGACCAGCCAGTGCAGCCTCGGCGGGCTTGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR GCA 72 bp | CACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTaGAAAGCTCCTTTGCTGTCTGCTAAGACCGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HRASQSPQGPQP*KAPLLSAKTAA Trigger: GGCAGCGGTCTTAGCAGACAGCAAAGGAGCTTTGCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR GCA 72 bp | GGCACCTGGCAGAGCAGTCCAAGGTTGGCAAGAGACTaGACTTTGTTGATCACCCACTTGCCCTCTGGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: GTWQSSPRLARD*TLLITHLPSGE Trigger: CTCGCCAGAGGGCAAGTGGGTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCAGGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR CCA 72 bp | CTCCACAACTGCCAAGCCCGCCGAGGCTGCACTGGCTaGTCCGGTGACATAAAAATCCATGCTCCACACACT | + |
|
Preference number: 3 (lower is better) Translates to: LHNCQARRGCTG*SGDIKIHAPHT Trigger: AGTGTGTGGAGCATGGATTTTTATGTCACCGGACCAGCCAGTGCAGCCTCGGCGGGCTTGGCAGTTGTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR CCA 72 bp | TGTGCATTCATTACAAGAGCAGTGTGGCCGGGCTTCTaGCCCCTTTCCAACACAGAGCCTGCAGAGGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CAFITRAVWPGF*PLSNTEPAEVC Trigger: GCAGACCTCTGCAGGCTCTGTGTTGGAAAGGGGCCAGAAGCCCGGCCACACTGCTCTTGTAATGAATGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTACGGAGCGATCCCTCATCTCGCCAAAGGCAGGAAGGAGGAGAGCTGCATCGCAGCTCCTGCTACAGTaGTTACAGAGTCAGGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: STERSLISPKAGRRRAASQLLLQ*LQSQGY Trigger: ATAACCCTGACTCTGTAACAACTGTAGCAGGAGCTG...CGATGCAGCTCTCCTCCTTCCTGCCTTTGGCGAGATGAGGGATCGCTCCGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR GCA 72 bp | CTGGCGAGACAGCAGATTGCATTTGTACTCCTTTCCTaGTCATGTTGCTCTACGGAGCGATCCCTCATCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LARQQIAFVLLS*SCCSTERSLIS Trigger: CGAGATGAGGGATCGCTCCGTAGAGCAACATGAGCAGGAAAGGAGTACAAATGCAATCTGCTGTCTCGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGAAGGCTGCTCTTTCCTTaGGGAGCGACGATGGTACGT | + |
|
Preference number: 3 (lower is better) Translates to: FPTCHSKLCAVLCSHRARRLLFP*GATMVR Trigger: ACGTACCATCGTCGCTCCCAAAGGAAAGAGCAGCCT...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTGCAAGAGACTGCACTTaGTTGATCACCCACTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIARDCT*LITHLP Trigger: GGGCAAGTGGGTGATCAACAAAGTGCAGTCTCTTGC...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCACCTGGCAGAGCAGTCCAAGGTTGGCAAGAGACTGCACTTTGTTGATCACTCCCCTTTGCAGAACTaGGGAAGTTCCTCAAACGTT | + |
|
Preference number: 3 (lower is better) Translates to: WHLAEQSKVGKRLHFVDHSPLQN*GSSSNV Trigger: AACGTTTGAGGAACTTCCCAAGTTCTGCAAAGGGGA...GTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCAGGTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTCAGCTCCTGCTACAGTaGTTACAGAGTCAGGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIQLLLQ*LQSQGY Trigger: ATAACCCTGACTCTGTAACAACTGTAGCAGGAGCTG...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTTGGCGAGACAGCAGATaGCATTTGTACTCCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIWRDSR*HLYSFP Trigger: AGGAAAGGAGTACAAATGCAATCTGCTGTCTCGCCA...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGATTTTGTAGCCAACACTaGACTGGACTTGCCTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FPTCHSKLCAVLCSHRARFCSQH*TGLAFG Trigger: CCCAAAGGCAAGTCCAGTCAAGTGTTGGCTACAAAA...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR CCA 72 bp | AAGAGACTGCACTTTGTTGATCACCCACTTGCCCTCTaGCGAGACAGCAGATTGCATTTGTACTCCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KRLHFVDHPLAL*RDSRLHLYSFP Trigger: AGGAAAGGAGTACAAATGCAATCTGCTGTCTCGCCAGAGGGCAAGTGGGTGATCAACAAAGTGCAGTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGATATCTTTGTTCCCCTTaGCAGAACTTGGGAAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FPTCHSKLCAVLCSHRARYLCSP*QNLGSS Trigger: GGAACTTCCCAAGTTCTGCAAAGGGGAACAAAGATA...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTAAGGAAGATTTATCTTaGTTCCCCTTTGCAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIKEDLS*FPFAEL Trigger: AAGTTCTGCAAAGGGGAACAAAGATAAATCTTCCTT...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGACAAGGGCAAGATCTGTaGGTCAAAATAACGAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: FPTCHSKLCAVLCSHRARQGQDL*VKITSF Trigger: AAAACTCGTTATTTTGACCAACAGATCTTGCCCTTG...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGAAAGGAAGATTTATCTTaGTTCCCCTTTGCAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: FPTCHSKLCAVLCSHRARKEDLS*FPFAEL Trigger: AAGTTCTGCAAAGGGGAACAAAGATAAATCTTCCTT...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR TCA 72 bp | TTCCTTATTAATTTGGTTTGTTTTGTAGCCAACACTTaGCTGGACTTGCCTTTGGGGATTTGTACCGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLINLVCFVANT*LDLPLGICTVQ Trigger: CTGCACGGTACAAATCCCCAAAGGCAAGTCCAGTCAAGTGTTGGCTACAAAACAAACCAAATTAATAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR TCA 72 bp | TTAGAACTAGGCAAAGTCAAAGCAACTTTGAATAACTaGCTCCTCTCTTCAGACGAGTTAAGCATGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LELGKVKATLNN*LLSSDELSMEA Trigger: TGCTTCCATGCTTAACTCGTCTGAAGAGAGGAGTCAGTTATTCAAAGTTGCTTTGACTTTGCCTAGTTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGAGAGCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCGTGGCGGCCATGCTCTaGGCTTGCTGTGGAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGEPNHRASQSPQGPQPCVAAML*ACCGVP Trigger: TGGCACTCCACAGCAAGCCCAGAGCATGGCCGCCAC...GCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGCTCTCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| CDS-3UTR CCA 90 bp | TCTACGGAGCGATCCCTCATCTCGCCAAAGGCAGGAAGGAGGAGAGCTGCATCGGTGGCGGCCATGCTCTaGGCTTGCTGTGGAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STERSLISPKAGRRRAASVAAML*ACCGVP Trigger: TGGCACTCCACAGCAAGCCCAGAGCATGGCCGCCAC...CGATGCAGCTCTCCTCCTTCCTGCCTTTGGCGAGATGAGGGATCGCTCCGTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGAGAGCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCTGCTTGGGATGGGTTTaGTCTCTGTCCCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGEPNHRASQSPQGPQPCCLGWV*SLSPAA Trigger: AGCAGCTGGGGACAGAGATCAAACCCATCCCAAGCA...GCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGCTCTCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGAGAGCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCGCCATGCTCTGGGCTTaGTGTGGAGTGCCATTATTG | + |
|
Preference number: 4 (lower is better) Translates to: TGEPNHRASQSPQGPQPCAMLWA*CGVPLL Trigger: CAATAATGGCACTCCACAGCAAGCCCAGAGCATGGC...GCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGCTCTCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| CDS-3UTR GCA 90 bp | TCTACGGAGCGATCCCTCATCTCGCCAAAGGCAGGAAGGAGGAGAGCTGCATCGGCCATGCTCTGGGCTTaGTGTGGAGTGCCATTATTG | + |
|
Preference number: 4 (lower is better) Translates to: STERSLISPKAGRRRAASAMLWA*CGVPLL Trigger: CAATAATGGCACTCCACAGCAAGCCCAGAGCATGGC...CGATGCAGCTCTCCTCCTTCCTGCCTTTGGCGAGATGAGGGATCGCTCCGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGAGAGCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCTTTCAAGTAAGGGGATaGGGTAGGCACCGCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGEPNHRASQSPQGPQPCFQVRG*GRHRFC Trigger: GCAAAAGCGGTGCCTACCTCATCCCCTTACTTGAAA...GCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGCTCTCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR CAA 72 bp | TGGCAGAGCAGTCCAAGGTTGGCAAGAGACTGCACTTaGTTGATCACCCACTTGCCCTCTGGCGAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WQSSPRLARDCT*LITHLPSGETA Trigger: TGCTGTCTCGCCAGAGGGCAAGTGGGTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| CDS-3UTR CCA 90 bp | TCTACGGAGCGATCCCTCATCTCGCCAAAGGCAGGAAGGAGGAGAGCTGCATCGAGTAGCTCGACTCTCTaGGAGGAGTTGCAGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: STERSLISPKAGRRRAASSSSTL*EELQKM Trigger: CATTTTCTGCAACTCCTCCCAGAGAGTCGAGCTACT...CGATGCAGCTCTCCTCCTTCCTGCCTTTGGCGAGATGAGGGATCGCTCCGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGAGAGCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCAGTAGCTCGACTCTCTaGGAGGAGTTGCAGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: TGEPNHRASQSPQGPQPCSSSTL*EELQKM Trigger: CATTTTCTGCAACTCCTCCCAGAGAGTCGAGCTACT...GCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGCTCTCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| CDS-3UTR CCA 90 bp | GCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCAAAGCTCCGCTGAGAAATCTTCTTaGCGAGTAGCTCGACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKPQSFSKPPGTTALQSSAEKSS*RVARLS Trigger: AGAGAGTCGAGCTACTCGCCAAGAAGATTTCTCAGC...GGAGCTTTGCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR CAA 72 bp | CACCCACTTGCCCTCTGGCGAGACAGCAGATTGCATTaGTACTCCTTTCCTGCTCATGTTGCTCTACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPLALWRDSRLH*YSFPAHVALRS Trigger: GCTCCGTAGAGCAACATGAGCAGGAAAGGAGTACAAATGCAATCTGCTGTCTCGCCAGAGGGCAAGTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| 3UTR CAA 72 bp | TCAGAGGCATGTGGCACCTGGCAGAGCAGTCCAAGGTaGGCAAGAGACTGCACTTTGTTGATCACCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SEACGTWQSSPR*ARDCTLLITHL Trigger: CAAGTGGGTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCAGGTGCCACATGCCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| CDS-3UTR CCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTCTGGTGTTCTTCAACTaGTTCAGCTGTGGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HPTGPTNCYDAGAHLEIILVFFN*FSCGCG Trigger: GCCACAGCCACAGCTGAACCAGTTGAAGAACACCAG...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
||
| CDS-3UTR TCA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTTTTCAAGTAAGGGGATaGGGTAGGCACCGCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIFQVRG*GRHRFC Trigger: GCAAAAGCGGTGCCTACCTCATCCCCTTACTTGAAA...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR TCA 90 bp | GCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCAAAGCTCCACAATCACCATTGCTTaGATATTGTCCTTCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: AKPQSFSKPPGTTALQSSTITIA*ILSFFR Trigger: CCTGAAGAAGGACAATATTCAAGCAATGGTGATTGT...GGAGCTTTGCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR GCA 90 bp | TGGCACCTGGCAGAGCAGTCCAAGGTTGGCAAGAGACTGCACTTTGTTGATCACAGTGTATTGAGGCAGTaGACTTTTTGGCGCTCCGTT | + |
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Preference number: 4 (lower is better) Translates to: WHLAEQSKVGKRLHFVDHSVLRQ*TFWRSV Trigger: AACGGAGCGCCAAAAAGTGCACTGCCTCAATACACT...GTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCAGGTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGACTGGTGTTCTTCAACTaGTTCAGCTGTGGCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: FPTCHSKLCAVLCSHRARLVFFN*FSCGCG Trigger: GCCACAGCCACAGCTGAACCAGTTGAAGAACACCAG...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR GCA 90 bp | TCTACGGAGCGATCCCTCATCTCGCCAAAGGCAGGAAGGAGGAGAGCTGCATCGGGGAACAATCACCATTaGTTGAATATTGTCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: STERSLISPKAGRRRAASGNNHH*LNIVLL Trigger: AAGAAGGACAATATTCAAGCAATGGTGATTGTTCCC...CGATGCAGCTCTCCTCCTTCCTGCCTTTGGCGAGATGAGGGATCGCTCCGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR GCA 90 bp | ACAGAGGAAAGAAGGTCAAGGCTCCCTCCGACAAGTCTTTACAGCGAGTGCCTTGCGCTCCGTTACATATaGGTAGTACTGAGTTACTCC | + |
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Preference number: 4 (lower is better) Translates to: TEERRSRLPPTSLYSECLALRYI*VVLSYS Trigger: GGAGTAACTCAGTACTACGCATATGTAACGGAGCGC...AAGGCACTCGCTGTAAAGACTTGTCGGAGGGAGCCTTGACCTTCTTTCCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR CAA 72 bp | AGGTTGGCAAGAGACTGCACTTTGTTGATCACCCACTaGCCCTCTGGCGAGACAGCAGATTGCATTTGTACT | + |
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Preference number: 4 (lower is better) Translates to: RLARDCTLLITH*PSGETADCICT Trigger: AGTACAAATGCAATCTGCTGTCTCGCCAGAGGGCAAGTGGGTGATCAACAAAGTGCAGTCTCTTGCCAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGAGCTGAGAAATCTTCTTaGCGAGTAGCTCGACTCTCT | + |
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Preference number: 4 (lower is better) Translates to: FPTCHSKLCAVLCSHRARAEKSS*RVARLS Trigger: AGAGAGTCGAGCTACTCGCCAAGAAGATTTCTCAGC...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR TCA 90 bp | TGGCACCTGGCAGAGCAGTCCAAGGTTGGCAAGAGACTGCACTTTGTTGATCACACAATCACCATTGCTTaGATATTGTCCTTCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: WHLAEQSKVGKRLHFVDHTITIA*ILSFFR Trigger: CCTGAAGAAGGACAATATTCAAGCAATGGTGATTGT...GTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCAGGTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CCA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGAACTCATTTCCTTTTGTaGAGGTCACATCCGAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: FPTCHSKLCAVLCSHRARTHFLL*RSHPKF Trigger: AAACTTCGGATGTGACCTCCACAAAAGGAAATGAGT...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| 3UTR CAA 72 bp | TCTGTACACTTCTCACACTCCAAGGAAGATTTATCTTaGTTCCCCTTTGCAGAACTTGGGAAGTTCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: SVHFSHSKEDLS*FPFAELGKFLK Trigger: TTTGAGGAACTTCCCAAGTTCTGCAAAGGGGAACAAAGATAAATCTTCCTTGGAGTGTGAGAAGTGTACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CAA 90 bp | ACAGGAGAGCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCGGCCATGCTCTGGGCTaGCTGTGGAGTGCCATTATT | + |
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Preference number: 5 (lower is better) Translates to: TGEPNHRASQSPQGPQPCGHALG*LWSAII Trigger: AATAATGGCACTCCACAGCAAGCCCAGAGCATGGCC...GCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGCTCTCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CAA 90 bp | GCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCAAAGCTCCTTTGCCACGCCTTTCTaGATGAGATCCAGGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: AKPQSFSKPPGTTALQSSFATPF*MRSRIL Trigger: CAGGATCCTGGATCTCATCAAGAAAGGCGTGGCAAA...GGAGCTTTGCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CAA 90 bp | ACAGGAGAGCCAAACCACAGAGCTTCTCAAAGCCCCCAGGGACCACAGCCTTGCTGTGGAGTGCCATTATaGATTGTGCTGGTGTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: TGEPNHRASQSPQGPQPCCGVPL*IVLVFF Trigger: GAAGAACACCAGCACAATCAATAATGGCACTCCACA...GCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGCTCTCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CAA 90 bp | CTCCTCCATATAAAGAAAAGGAAAATGGCGCTGCCATCACTAGTCCACCTTCCGGGCCATGCTCTGGGCTaGCTGTGGAGTGCCATTATT | + |
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Preference number: 5 (lower is better) Translates to: LLHIKKRKMALPSLVHLPGHALG*LWSAII Trigger: AATAATGGCACTCCACAGCAAGCCCAGAGCATGGCC...CGGAAGGTGGACTAGTGATGGCAGCGCCATTTTCCTTTTCTTTATATGGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CAA 90 bp | ACAGAGGAAAGAAGGTCAAGGCTCCCTCCGACAAGTCTTTACAGCGAGTGCCTTTTTGCCACGCCTTTCTaGATGAGATCCAGGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: TEERRSRLPPTSLYSECLFATPF*MRSRIL Trigger: CAGGATCCTGGATCTCATCAAGAAAGGCGTGGCAAA...AAGGCACTCGCTGTAAAGACTTGTCGGAGGGAGCCTTGACCTTCTTTCCTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CAA 90 bp | TCTACGGAGCGATCCCTCATCTCGCCAAAGGCAGGAAGGAGGAGAGCTGCATCGAACAATCACCATTGCTaGAATATTGTCCTTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: STERSLISPKAGRRRAASNNHHC*NIVLLQ Trigger: CTGAAGAAGGACAATATTCAAGCAATGGTGATTGTT...CGATGCAGCTCTCCTCCTTCCTGCCTTTGGCGAGATGAGGGATCGCTCCGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CAA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTCAAACTCATTTCCTTTaGTGGAGGTCACATCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: HPTGPTNCYDAGAHLEIIQTHFL*WRSHPK Trigger: CTTCGGATGTGACCTCCACAAAAGGAAATGAGTTTG...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CAA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGATGTGGAGTGCCATTATaGATTGTGCTGGTGTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: FPTCHSKLCAVLCSHRARCGVPL*IVLVFF Trigger: GAAGAACACCAGCACAATCAATAATGGCACTCCACA...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CAA 90 bp | TGGCACCTGGCAGAGCAGTCCAAGGTTGGCAAGAGACTGCACTTTGTTGATCACTATCTCGTAGGGTTTTaGCAGATGGGAATTCATAAA | + |
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Preference number: 5 (lower is better) Translates to: WHLAEQSKVGKRLHFVDHYLVGF*QMGIHK Trigger: TTTATGAATTCCCATCTGCAAAAACCCTACGAGATA...GTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCAGGTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CAA 90 bp | CACCCCACCGGGCCAACCAATTGTTATGATGCTGGTGCCCACCTGGAAATAATTAACAATCACCATTGCTaGAATATTGTCCTTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: HPTGPTNCYDAGAHLEIINNHHC*NIVLLQ Trigger: CTGAAGAAGGACAATATTCAAGCAATGGTGATTGTT...AATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGCCCGGTGGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS-3UTR CAA 90 bp | TTTCCAACATGTCACTCCAAACTCTGTGCTGTGCTCTGTTCTCACCGAGCACGATATCTCGTAGGGTTTTaGCAGATGGGAATTCATAAA | + |
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Preference number: 5 (lower is better) Translates to: FPTCHSKLCAVLCSHRARYLVGF*QMGIHK Trigger: TTTATGAATTCCCATCTGCAAAAACCCTACGAGATA...TCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS CAA 72 bp | GCGGCCATGCTCTGGGCTTGCTGTGGAGTGCCATTATaGATTGTGCTGGTGTTCTTCAACTGGTTCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: AAMLWACCGVPL*IVLVFFNWFSC Trigger: ACAGCTGAACCAGTTGAAGAACACCAGCACAATCAATAATGGCACTCCACAGCAAGCCCAGAGCATGGCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS CAA 90 bp | TTAATAGTGGCGGCCATGCTCTGGGCTTGCTGTGGAGTGCCATTATaGATTGTGCTGGTGTTCTTCAACTGGTTCAGCTGTGGCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LIVAAMLWACCGVPL*IVLVFFNWFSCGCG Trigger: GCCACAGCCACAGCTGAACCAGTTGAAGAACACCAGCACAATCAATAATGGCACTCCACAGCAAGCCCAGAGCATGGCCGCCACTATTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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| CDS CCA 72 bp | TATAAAAGCAAGAGTAGCCCAGCTGAGAAATCTTCTTaGCGAGTAGCTCGACTCTCTGGGAGGAGTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: YKSKSSPAEKSS*RVARLSGRSCR Trigger: TCTGCAACTCCTCCCAGAGAGTCGAGCTACTCGCCAAGAAGATTTCTCAGCTGGGCTACTCTTGCTTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170489.2 ENSMUST00000217034.2 |
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