Pregenerated sensors for DDX59 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026404Ensembl transcript IDs: ENSMUST00000027655.8
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTATTAGAACCCACAGGATGATCTaGCGCACACTGGCGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: RVFCPCPSLLTRSYSIIRTHRMI*RTLAQG Trigger: GCCCTGCGCCAGTGTGCGGCAGATCATCCTGTGGGT...TCTAATAATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR TCA 90 bp | GGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAAGGACTGTTGGTGCTTaGTGCATGGCCGGGCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: GHTVLLEILVITHNKPMGRTVGA*CMAGLV Trigger: GACAAGCCCGGCCATGCATCAAGCACCAACAGTCCT...TCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR TCA 90 bp | AGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTATTAGACTTCTACCCACAGGATaGTCTGCCGCACACTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RVFCPCPSLLTRSYSIIRLLPTG*SAAHWR Trigger: GCGCCAGTGTGCGGCAGATCATCCTGTGGGTAGAAG...TCTAATAATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | ACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAAATGACAGGCTCCCCAGGCTCTaGCCACCGCTGGGTTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: TVLLEILVITHNKPMGNDRLPRL*PPLGFR Trigger: TCTAAAACCCAGCGGTGGCCAGAGCCTGGGGAGCCT...GTCATTTCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR TCA 90 bp | AGATCTTATAGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTTGCTGTTCAGACCTGTaGTCTTCTGAACCGCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: RSYRVFCPCPSLLTRSYSCCSDL*SSEPPR Trigger: GCGAGGCGGTTCAGAAGATCACAGGTCTGAACAGCA...ACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCTATAAGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR GCA 90 bp | GGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAATGGCCGGGCTTGTCTaGTGTGACAGCTTCCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: GHTVLLEILVITHNKPMGMAGLV*CDSFLS Trigger: ACTGAGGAAGCTGTCACAGCAGACAAGCCCGGCCAT...TCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR TCA 90 bp | GGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGATCCCTCCTTTCCACCTaGGACTTCTCTGAGTGGATG | + |
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Preference number: 4 (lower is better) Translates to: GHTVLLEILVITHNKPMGSLLST*DFSEWM Trigger: CATCCACTCAGAGAAGTCTCAGGTGGAAAGGAGGGA...TCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR GCA 90 bp | GGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAAAGAAGGACTGTTGGTaGTTGATGCATGGCCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHTVLLEILVITHNKPMGKKDCW*LMHGRA Trigger: AGCCCGGCCATGCATCAAGCACCAACAGTCCTTCTT...TCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR GCA 90 bp | ACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAAATGACCCCACAGGAATCATCTaGATCTGGATGGGGGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TVLLEILVITHNKPMGNDPTGII*IWMGVG Trigger: GCCAACCCCCATCCAGATGCAGATGATTCCTGTGGG...GTCATTTCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | CTAGGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGCAAGAAGGACTGTTaGTGCTTGATGCATGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LGHTVLLEILVITHNKPMGKKDC*CLMHGR Trigger: CCGGCCATGCATCAAGCACCAACAGTCCTTCTTGCC...CATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | CTAGGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGCTCTTCAGATGGGTaGCTGTCCTTCACACCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGHTVLLEILVITHNKPMGSSDG*LSFTPS Trigger: TGAGGGTGTGAAGGACAGCCACCCATCTGAAGAGCC...CATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | AGATCTTATAGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTTACAGGCTCTTCAGATaGGTGGCTGTCCTTCACACC | + |
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Preference number: 4 (lower is better) Translates to: RSYRVFCPCPSLLTRSYSYRLFR*VAVLHT Trigger: GGTGTGAAGGACAGCCACCCATCTGAAGAGCCTGTA...ACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCTATAAGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR TCA 90 bp | TCTTATAGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTAGCTTCCTCAGTGACTaGTGTGTGGACCGGAGTATC | + |
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Preference number: 4 (lower is better) Translates to: SYRVFCPCPSLLTRSYSISFLSD*CVDRSI Trigger: GATACTCCGGTCCACACATCAGTCACTGAGGAAGCT...AATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCTATAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR TCA 90 bp | CTAGGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGCCTGCCTCTCTATCTaGATGGCCAGTTCTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LGHTVLLEILVITHNKPMACLSI*MASSLV Trigger: GACAAGAGAACTGGCCATTCAGATAGAGAGGCAGGC...CATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | GGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGACCTCATCAGGTCCTGTaGAAGAAACCTCAGCCAACT | + |
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Preference number: 4 (lower is better) Translates to: GHTVLLEILVITHNKPMGPHQVL*KKPQPT Trigger: AGTTGGCTGAGGTTTCTTCCACAGGACCTGATGAGG...TCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | AGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTATTAGACTCTCTGTGGGCTGCTaGGTCTTAATGATCCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RVFCPCPSLLTRSYSIIRLSVGC*VLMILP Trigger: GGGAAGGATCATTAAGACCCAGCAGCCCACAGAGAG...TCTAATAATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | CTAGGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAATCATCTGCATCTaGATGGGGGTTGGCACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LGHTVLLEILVITHNKPMGIICI*MGVGTS Trigger: CGAAGTGCCAACCCCCATCCAGATGCAGATGATTCC...CATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR TCA 90 bp | TCTTATAGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTGCAACGTCTTGTCCTTaGACTGAGATTCCTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SYRVFCPCPSLLTRSYSIATSCP*TEIPSC Trigger: GCAGCTAGGAATCTCAGTTCAAGGACAAGACGTTGC...AATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCTATAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR TCA 90 bp | CTAGGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGCAGAAGCTGGTCTGTaGGCTGTTCTATGCTATCTG | + |
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Preference number: 4 (lower is better) Translates to: LGHTVLLEILVITHNKPMAEAGL*AVLCYL Trigger: CAGATAGCATAGAACAGCTCACAGACCAGCTTCTGC...CATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR GCA 90 bp | AGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTATTAGAGAAGCACTGTCTTCATaGGAGGCAGACCACTCATCA | + |
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Preference number: 4 (lower is better) Translates to: RVFCPCPSLLTRSYSIIREALSS*EADHSS Trigger: TGATGAGTGGTCTGCCTCGCATGAAGACAGTGCTTC...TCTAATAATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR GCA 90 bp | GGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAATCCTCACAGGATTATaGAGAAGCTGGTCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHTVLLEILVITHNKPMGILTGL*RSWSVS Trigger: GCTCACAGACCAGCTTCTGCATAATCCTGTGAGGAT...TCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | AGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTATTAGAGAAACCTCAGCCAACTaGCAAGAAGGACTGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVFCPCPSLLTRSYSIIRETSAN*QEGLLV Trigger: CACCAACAGTCCTTCTTGCCAGTTGGCTGAGGTTTC...TCTAATAATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | ACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAAATGACGGCTCTGGCCACCGCTaGGTTTTAGAAAACGACTTT | + |
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Preference number: 4 (lower is better) Translates to: TVLLEILVITHNKPMGNDGSGHR*VLENDF Trigger: AAAGTCGTTTTCTAAAACCCAGCGGTGGCCAGAGCC...GTCATTTCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | TCTTATAGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTGCCTCTCTATCTGAATaGCCAGTTCTCTTGTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: SYRVFCPCPSLLTRSYSIASLSE*PVLLSV Trigger: CACCGACAAGAGAACTGGCCATTCAGATAGAGAGGC...AATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCTATAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | AGATCTTATAGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTTGGGCTTCACTCTTTTaGCAACATCCCAGAAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: RSYRVFCPCPSLLTRSYSWASLF*QHPRRV Trigger: GACTCTTCTGGGATGTTGCCAAAAGAGTGAAGCCCA...ACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCTATAAGATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | TCTTATAGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTGGAGAATGGATCCCGTaGGCTTCACTCTTTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SYRVFCPCPSLLTRSYSIGEWIP*ASLFWQ Trigger: TTGCCAAAAGAGTGAAGCCCACGGGATCCATTCTCC...AATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCTATAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR TCA 90 bp | CTAGGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGTCAAGCACTTGCTGCTaGAAGCCCATCTTCAACATG | + |
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Preference number: 4 (lower is better) Translates to: LGHTVLLEILVITHNKPMSSTCC*KPIFNM Trigger: CATGTTGAAGATGGGCTTTCAGCAGCAAGTGCTTGA...CATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR GCA 90 bp | CTAGGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGACTCTGCCAACCTGGTaGACATACTCATCCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: LGHTVLLEILVITHNKPMTLPTW*TYSSML Trigger: AAGCATGGATGAGTATGTGCACCAGGTTGGCAGAGT...CATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | ACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAAATGACCACTCATCAGTTCCTTaGCCTGCCTCTCTATCTGAA | + |
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Preference number: 4 (lower is better) Translates to: TVLLEILVITHNKPMGNDHSSVP*PASLSE Trigger: TTCAGATAGAGAGGCAGGCCAAGGAACTGATGAGTG...GTCATTTCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | GGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAGGATTATGCAGAAGCTaGTCTGTGAGCTGTTCTATG | + |
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Preference number: 4 (lower is better) Translates to: GHTVLLEILVITHNKPMGGLCRS*SVSCSM Trigger: CATAGAACAGCTCACAGACCAGCTTCTGCATAATCC...TCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR GCA 90 bp | GGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAAAGTCGTCCAGGGGTTaGTATGATAACCTTAACATG | + |
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Preference number: 4 (lower is better) Translates to: GHTVLLEILVITHNKPMGKSSRG*YDNLNM Trigger: CATGTTAAGGTTATCATAGCAACCCCTGGACGACTT...TCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | CTAGGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGTTAAGGGTTTCAATCTaGTCCTCCTTGAGGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: LGHTVLLEILVITHNKPMLRVSI*SSLRVT Trigger: TGTGACCCTCAAGGAGGACCAGATTGAAACCCTTAA...CATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | GGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAGAGAATGAGTGCGGATaGAGTTTTATCCTCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: GHTVLLEILVITHNKPMGENECG*SFILRE Trigger: TTCTCTGAGGATAAAACTCCATCCGCACTCATTCTC...TCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | AGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTATTAGAAGCCCATCTTCAACATaGTGTCAGCTTCGTCTACTA | + |
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Preference number: 4 (lower is better) Translates to: RVFCPCPSLLTRSYSIIRSPSST*CQLRLL Trigger: TAGTAGACGAAGCTGACACCATGTTGAAGATGGGCT...TCTAATAATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | CTAGGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGTGCTATCTGGAATGGTaGCAGAAACCAAGATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LGHTVLLEILVITHNKPMCYLEW*QKPRWS Trigger: AGACCATCTTGGTTTCTGCCACCATTCCAGATAGCA...CATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | ACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAAATGACCTATGCTATCTGGAATaGTGGCAGAAACCAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: TVLLEILVITHNKPMGNDLCYLE*WQKPRW Trigger: CCATCTTGGTTTCTGCCACCATTCCAGATAGCATAG...GTCATTTCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR TCA 90 bp | CTAGGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGTGGCACTTCGTAGCCTaGTTTCTTCAAGTTCTGATT | + |
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Preference number: 4 (lower is better) Translates to: LGHTVLLEILVITHNKPMWHFVA*FLQVLI Trigger: AATCAGAACTTGAAGAAATCAGGCTACGAAGTGCCA...CATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR CCA 90 bp | ACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAAATGACCTGTTCTATGCTATCTaGAATGGTGGCAGAAACCAA | + |
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Preference number: 4 (lower is better) Translates to: TVLLEILVITHNKPMGNDLFYAI*NGGRNQ Trigger: TTGGTTTCTGCCACCATTCCAGATAGCATAGAACAG...GTCATTTCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR GCA 90 bp | ACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAAATGACACTGAGATTCCTAGCTaGTGTTTAAGGGTTTCAATC | + |
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Preference number: 4 (lower is better) Translates to: TVLLEILVITHNKPMGNDTEIPS*CLRVSI Trigger: GATTGAAACCCTTAAACAGCAGCTAGGAATCTCAGT...GTCATTTCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR TCA 90 bp | TCTTATAGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTATACTCATCCATGCTTaGAGGCATATCAAAATTCAC | + |
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Preference number: 4 (lower is better) Translates to: SYRVFCPCPSLLTRSYSIILIHA*RHIKIH Trigger: GTGAATTTTGATATGCCTTCAAGCATGGATGAGTAT...AATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCTATAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR GCA 90 bp | AGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTATTAGAGCACATACTCATCCATaGTTGAAGGCATATCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: RVFCPCPSLLTRSYSIIRAHTHP*LKAYQN Trigger: ATTTTGATATGCCTTCAAGCATGGATGAGTATGTGC...TCTAATAATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS-3UTR GCA 90 bp | ACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGGGAAATGACATTGATGAATGTGATTaGAGTTCCATTTTGACCGAG | + |
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Preference number: 4 (lower is better) Translates to: TVLLEILVITHNKPMGNDIDECD*SSILTE Trigger: CTCGGTCAAAATGGAACTGCAATCACATTCATCAAT...GTCATTTCCCATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS GCA 90 bp | GCTGTGGGGGCAGAGGTAAGCCCCCTACGAGAAGCACTGTCTTCATaGGAGGCAGACCACTCATCAGTTCCTTGGCCTGCCTCTCTATCT | + |
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Preference number: 5 (lower is better) Translates to: AVGAEVSPLREALSS*EADHSSVPWPASLS Trigger: AGATAGAGAGGCAGGCCAAGGAACTGATGAGTGGTCTGCCTCGCATGAAGACAGTGCTTCTCGTAGGGGGCTTACCTCTGCCCCCACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS CCA 90 bp | GGTCACAATAAAGGGGTGCTCTTTGTAGACATAAAAGGCATCCAGTaGGGACTCTGGCTCGGCAGCCACTCTCTGTGGGCTGCTGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: GHNKGVLFVDIKGIQ*GLWLGSHSLWAAGS Trigger: AGACCCAGCAGCCCACAGAGAGTGGCTGCCGAGCCAGAGTCCCCACTGGATGCCTTTTATGTCTACAAAGAGCACCCCTTTATTGTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS CCA 90 bp | GCTCTTCAGATGGGTGGCTGTCCTTCACACCCTCATCAGGTCCTGTaGAAGAAACCTCAGCCAACTGGCAAGAAGGACTGTTGGTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: ALQMGGCPSHPHQVL*KKPQPTGKKDCWCL Trigger: CAAGCACCAACAGTCCTTCTTGCCAGTTGGCTGAGGTTTCTTCCACAGGACCTGATGAGGGTGTGAAGGACAGCCACCCATCTGAAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS TCA 90 bp | GACTTCTCTGAGTGGATGGATGTGCTGTTCAGACCTGTGATCTTCTaGACCGCCTCGCTCAACAGATCTGCGCCTAGTTTGCAGTCCACG | + |
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Preference number: 5 (lower is better) Translates to: DFSEWMDVLFRPVIF*TASLNRSAPSLQST Trigger: CGTGGACTGCAAACTAGGCGCAGATCTGTTGAGCGAGGCGGTTCAGAAGATCACAGGTCTGAACAGCACATCCATCCACTCAGAGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS TCA 90 bp | CCACCTGAGACTTCTCTGAGTGGATGGATGTGCTGTTCAGACCTGTaGTCTTCTGAACCGCCTCGCTCAACAGATCTGCGCCTAGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPETSLSGWMCCSDL*SSEPPRSTDLRLVC Trigger: GCAAACTAGGCGCAGATCTGTTGAGCGAGGCGGTTCAGAAGATCACAGGTCTGAACAGCACATCCATCCACTCAGAGAAGTCTCAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 90 bp | TGGCCACCGCTGGGTTTTAGAAAACGACTTTACAGGCTCTTCAGATaGGTGGCTGTCCTTCACACCCTCATCAGGTCCTGTGGAAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WPPLGFRKRLYRLFR*VAVLHTLIRSCGRN Trigger: GTTTCTTCCACAGGACCTGATGAGGGTGTGAAGGACAGCCACCCATCTGAAGAGCCTGTAAAGTCGTTTTCTAAAACCCAGCGGTGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS TCA 90 bp | CCACAGTGCTCGAAGTCGATAATGGGCCTGGCAACGTCTTGTCCTTaGACTGAGATTCCTAGCTGCTGTTTAAGGGTTTCAATCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQCSKSIMGLATSCP*TEIPSCCLRVSIWS Trigger: GGACCAGATTGAAACCCTTAAACAGCAGCTAGGAATCTCAGTTCAAGGACAAGACGTTGCCAGGCCCATTATCGACTTCGAGCACTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS GCA 90 bp | CTGCTGGGTCTTAATGATCCTTCCCCTTCCTTAACTTGTAGCAGATaGTTCGCTTTGCACTCCAAGCTACACACGTCTTCGTCCGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLGLNDPSPSLTCSR*FALHSKLHTSSSVL Trigger: CAAGACGGACGAAGACGTGTGTAGCTTGGAGTGCAAAGCGAAGCATCTGCTACAAGTTAAGGAAGGGGAAGGATCATTAAGACCCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 90 bp | GAATGTCCCTTCCCAGGAGCCCCACAGGAATCATCTGCATCTGGATaGGGGTTGGCACTTCGTAGCCTGATTTCTTCAAGTTCTGATTTA | + |
|
Preference number: 5 (lower is better) Translates to: ECPFPGAPQESSASG*GLALRSLISSSSDL Trigger: TAAATCAGAACTTGAAGAAATCAGGCTACGAAGTGCCAACCCCCATCCAGATGCAGATGATTCCTGTGGGGCTCCTGGGAAGGGACATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 90 bp | TCTGCTCATGAAGGTAAGGGGAATTTAATAGCTGTGGCGGGAGAATaGATCCCGTGGGCTTCACTCTTTTGGCAACATCCCAGAAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SAHEGKGNLIAVAGE*IPWASLFWQHPRRV Trigger: GACTCTTCTGGGATGTTGCCAAAAGAGTGAAGCCCACGGGATCCATTCTCCCGCCACAGCTATTAAATTCCCCTTACCTTCATGAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 90 bp | CACAGGATTATGCAGAAGCTGGTCTGTGAGCTGTTCTATGCTATCTaGAATGGTGGCAGAAACCAAGATGGTCTGACAGTCACCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HRIMQKLVCELFYAI*NGGRNQDGLTVTRS Trigger: ACTCCTGGTGACTGTCAGACCATCTTGGTTTCTGCCACCATTCCAGATAGCATAGAACAGCTCACAGACCAGCTTCTGCATAATCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 90 bp | AGGTTCTTGTCCCCAGTGATGATCCTCACAGGATTATGCAGAAGCTaGTCTGTGAGCTGTTCTATGCTATCTGGAATGGTGGCAGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: RFLSPVMILTGLCRS*SVSCSMLSGMVAET Trigger: GGTTTCTGCCACCATTCCAGATAGCATAGAACAGCTCACAGACCAGCTTCTGCATAATCCTGTGAGGATCATCACTGGGGACAAGAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS TCA 90 bp | GAGTCTCCCAACTCTGCCAACCTGGTGCACATACTCATCCATGCTTaGAGGCATATCAAAATTCACAACCAGCTTGACGTTGACCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ESPNSANLVHILIHA*RHIKIHNQLDVDQV Trigger: GACTTGGTCAACGTCAAGCTGGTTGTGAATTTTGATATGCCTTCAAGCATGGATGAGTATGTGCACCAGGTTGGCAGAGTTGGGAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS GCA 90 bp | CCTCTCTATCTGAATGGCCAGTTCTCTTGTCGGTGTGAGAATGAGTaGGGATGGAGTTTTATCCTCAGAGAAAGCTCGGATAATAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLYLNGQFSCRCENE*GWSFILRESSDNNR Trigger: CCTGTTATTATCCGAGCTTTCTCTGAGGATAAAACTCCATCCGCACTCATTCTCACACCGACAAGAGAACTGGCCATTCAGATAGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTATTAGAGCGCAGGGCAGGTTCTaGTCCCCAGTGATGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RVFCPCPSLLTRSYSIIRAQGRF*SPVMIL Trigger: GAGGATCATCACTGGGGACAAGAACCTGCCCTGCGC...TCTAATAATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS-3UTR CAA 90 bp | AGATCTTATAGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATAATGTCCATGAGGTaGGCCCCCGTGACCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSYRVFCPCPSLLTRSYSIMSMR*APVTRL Trigger: CAGCCTGGTCACGGGGGCCAACCTCATGGACATTAT...ACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCTATAAGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS TCA 90 bp | CATGGTGTCAGCTTCGTCTACTACGACAATTTTTATGCCACTGAGTaGTACGGAGCTCTGTTTAATTATATCCAGAAGTCGTCCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HGVSFVYYDNFYATE*YGALFNYIQKSSRG Trigger: ACCCCTGGACGACTTCTGGATATAATTAAACAGAGCTCCGTATCACTCAGTGGCATAAAAATTGTCGTAGTAGACGAAGCTGACACCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS-3UTR CAA 90 bp | AGATCTTATAGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTACAACCAGCTTGACGTaGACCAAGTCTAGGCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RSYRVFCPCPSLLTRSYSTTSLT*TKSRPR Trigger: TCGGGGCCTAGACTTGGTCAACGTCAAGCTGGTTGT...ACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCTATAAGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS TCA 90 bp | AGTCTTTTAGAGTTGTTATTGATGAATGTGATTGCAGTTCCATTTTaGCCGAGTCTCCCAACTCTGCCAACCTGGTGCACATACTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLELLLMNVIAVPF*PSLPTLPTWCTYSS Trigger: GGATGAGTATGTGCACCAGGTTGGCAGAGTTGGGAGACTCGGTCAAAATGGAACTGCAATCACATTCATCAATAACAACTCTAAAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTATTAGAGCATCTGGATGGGGGTaGGCACTTCGTAGCCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: RVFCPCPSLLTRSYSIIRASGWG*ALRSLI Trigger: AATCAGGCTACGAAGTGCCAACCCCCATCCAGATGC...TCTAATAATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS-3UTR CAA 90 bp | TCTTATAGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTTCAATCTGGTCCTCCTaGAGGGTCACAATAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SYRVFCPCPSLLTRSYSISIWSS*RVTIKG Trigger: CCCCTTTATTGTGACCCTCAAGGAGGACCAGATTGA...AATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCTATAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS-3UTR CAA 90 bp | TCTTATAGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTGTGGGCTTCACTCTTTaGGCAACATCCCAGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SYRVFCPCPSLLTRSYSIVGFTL*ATSQKS Trigger: ACTCTTCTGGGATGTTGCCAAAAGAGTGAAGCCCAC...AATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCTATAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGTCATACAGTATTATTAGAAATTTTGGTGATAACGCATAACAAGCCCATGACGTCTTCGTCCGTCTaGTCACAGATATACTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGHTVLLEILVITHNKPMTSSSV*SQIYSP Trigger: TGGAGAGTATATCTGTGACAAGACGGACGAAGACGT...CATGGGCTTGTTATGCGTTATCACCAAAATTTCTAATAATACTGTATGACCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTCTTCTGTCCTTGTCCAAGTTTATTGACTAGGTCATACAGTATTATTAGACATACTCATCCATGCTaGAAGGCATATCAAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVFCPCPSLLTRSYSIIRHTHPC*KAYQNS Trigger: TGAATTTTGATATGCCTTCAAGCATGGATGAGTATG...TCTAATAATACTGTATGACCTAGTCAATAAACTTGGACAAGGACAGAAGACTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS TCA 72 bp | GCCGGGCTTGTCTGCTGTGACAGCTTCCTCAGTGACTaGTGTGTGGACCGGAGTATCTCTGTCTCCCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AGLVCCDSFLSD*CVDRSISVSLH Trigger: GTGGAGGGAGACAGAGATACTCCGGTCCACACATCAGTCACTGAGGAAGCTGTCACAGCAGACAAGCCCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS GCA 72 bp | GCAGAGGTAAGCCCCCTACGAGAAGCACTGTCTTCATaGGAGGCAGACCACTCATCAGTTCCTTGGCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AEVSPLREALSS*EADHSSVPWPA Trigger: GGCAGGCCAAGGAACTGATGAGTGGTCTGCCTCGCATGAAGACAGTGCTTCTCGTAGGGGGCTTACCTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 72 bp | CTCTTTGTAGACATAAAAGGCATCCAGTGGGGACTCTaGCTCGGCAGCCACTCTCTGTGGGCTGCTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LFVDIKGIQWGL*LGSHSLWAAGS Trigger: AGACCCAGCAGCCCACAGAGAGTGGCTGCCGAGCCAGAGTCCCCACTGGATGCCTTTTATGTCTACAAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CAA 90 bp | TCTACCCACAGGATGATCTGCCGCACACTGGCGCAGGGCAGGTTCTaGTCCCCAGTGATGATCCTCACAGGATTATGCAGAAGCTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: STHRMICRTLAQGRF*SPVMILTGLCRSWS Trigger: AGACCAGCTTCTGCATAATCCTGTGAGGATCATCACTGGGGACAAGAACCTGCCCTGCGCCAGTGTGCGGCAGATCATCCTGTGGGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS TCA 72 bp | AACCTCAGCCAACTGGCAAGAAGGACTGTTGGTGCTTaGTGCATGGCCGGGCTTGTCTGCTGTGACAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NLSQLARRTVGA*CMAGLVCCDSF Trigger: GAAGCTGTCACAGCAGACAAGCCCGGCCATGCATCAAGCACCAACAGTCCTTCTTGCCAGTTGGCTGAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS GCA 72 bp | TTCTTTTTAGCTGGGTCTTCTACCCACAGGATGATCTaGCGCACACTGGCGCAGGGCAGGTTCTTGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: FFLAGSSTHRMI*RTLAQGRFLSP Trigger: TGGGGACAAGAACCTGCCCTGCGCCAGTGTGCGGCAGATCATCCTGTGGGTAGAAGACCCAGCTAAAAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 72 bp | AAAGGGGTGCTCTTTGTAGACATAAAAGGCATCCAGTaGGGACTCTGGCTCGGCAGCCACTCTCTGTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KGVLFVDIKGIQ*GLWLGSHSLWA Trigger: AGCCCACAGAGAGTGGCTGCCGAGCCAGAGTCCCCACTGGATGCCTTTTATGTCTACAAAGAGCACCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CAA 72 bp | AGGATGATCTGCCGCACACTGGCGCAGGGCAGGTTCTaGTCCCCAGTGATGATCCTCACAGGATTATGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RMICRTLAQGRF*SPVMILTGLCR Trigger: TCTGCATAATCCTGTGAGGATCATCACTGGGGACAAGAACCTGCCCTGCGCCAGTGTGCGGCAGATCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CAA 72 bp | CAAGAAGGACTGTTGGTGCTTGATGCATGGCCGGGCTaGTCTGCTGTGACAGCTTCCTCAGTGACTGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: QEGLLVLDAWPG*SAVTASSVTDV Trigger: CACATCAGTCACTGAGGAAGCTGTCACAGCAGACAAGCCCGGCCATGCATCAAGCACCAACAGTCCTTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 72 bp | TTCCCAGGAGCCCCACAGGAATCATCTGCATCTGGATaGGGGTTGGCACTTCGTAGCCTGATTTCTTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: FPGAPQESSASG*GLALRSLISSS Trigger: ACTTGAAGAAATCAGGCTACGAAGTGCCAACCCCCATCCAGATGCAGATGATTCCTGTGGGGCTCCTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 72 bp | CTGTCTTCATGCGAGGCAGACCACTCATCAGTTCCTTaGCCTGCCTCTCTATCTGAATGGCCAGTTCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSSCEADHSSVP*PASLSEWPVLL Trigger: CAAGAGAACTGGCCATTCAGATAGAGAGGCAGGCCAAGGAACTGATGAGTGGTCTGCCTCGCATGAAGACAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CAA 90 bp | CCCTTCCCAGGAGCCCCACAGGAATCATCTGCATCTGGATGGGGGTaGGCACTTCGTAGCCTGATTTCTTCAAGTTCTGATTTAAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PFPGAPQESSASGWG*ALRSLISSSSDLRS Trigger: AGACCTTAAATCAGAACTTGAAGAAATCAGGCTACGAAGTGCCAACCCCCATCCAGATGCAGATGATTCCTGTGGGGCTCCTGGGAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 72 bp | GGGAATTTAATAGCTGTGGCGGGAGAATGGATCCCGTaGGCTTCACTCTTTTGGCAACATCCCAGAAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GNLIAVAGEWIP*ASLFWQHPRRV Trigger: GACTCTTCTGGGATGTTGCCAAAAGAGTGAAGCCCACGGGATCCATTCTCCCGCCACAGCTATTAAATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 72 bp | GAAGGTAAGGGGAATTTAATAGCTGTGGCGGGAGAATaGATCCCGTGGGCTTCACTCTTTTGGCAACATCCC | + |
|
Preference number: 6 (lower is better) Translates to: EGKGNLIAVAGE*IPWASLFWQHP Trigger: GGGATGTTGCCAAAAGAGTGAAGCCCACGGGATCCATTCTCCCGCCACAGCTATTAAATTCCCCTTACCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CAA 72 bp | GGAGCCCCACAGGAATCATCTGCATCTGGATGGGGGTaGGCACTTCGTAGCCTGATTTCTTCAAGTTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GAPQESSASGWG*ALRSLISSSSD Trigger: ATCAGAACTTGAAGAAATCAGGCTACGAAGTGCCAACCCCCATCCAGATGCAGATGATTCCTGTGGGGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CAA 72 bp | TCCATGCTTGAAGGCATATCAAAATTCACAACCAGCTaGACGTTGACCAAGTCTAGGCCCCGACCCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SMLEGISKFTTS*TLTKSRPRPRT Trigger: GGTCCTGGGTCGGGGCCTAGACTTGGTCAACGTCAAGCTGGTTGTGAATTTTGATATGCCTTCAAGCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CAA 72 bp | CTGCTCTTTTCGTGTTTCCTAATAATGTCCATGAGGTaGGCCCCCGTGACCAGGCTGTTCTGTGTCTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLFSCFLIMSMR*APVTRLFCVCL Trigger: CAGACAGACACAGAACAGCCTGGTCACGGGGGCCAACCTCATGGACATTATTAGGAAACACGAAAAGAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CAA 90 bp | GATGGTCTGACAGTCACCAGGAGTGTGTTCCAAAACGTCAAGCACTaGCTGCTGAAAGCCCATCTTCAACATGGTGTCAGCTTCGTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: DGLTVTRSVFQNVKH*LLKAHLQHGVSFVY Trigger: GTAGACGAAGCTGACACCATGTTGAAGATGGGCTTTCAGCAGCAAGTGCTTGACGTTTTGGAACACACTCCTGGTGACTGTCAGACCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS TCA 72 bp | CCAGGAGTGTGTTCCAAAACGTCAAGCACTTGCTGCTaGAAGCCCATCTTCAACATGGTGTCAGCTTCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGVCSKTSSTCC*KPIFNMVSASS Trigger: AGACGAAGCTGACACCATGTTGAAGATGGGCTTTCAGCAGCAAGTGCTTGACGTTTTGGAACACACTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS TCA 72 bp | CTTCAGGATGTCCCTCCTTTCCACCTGAGACTTCTCTaGGTGGATGGATGTGCTGTTCAGACCTGTGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LQDVPPFHLRLL*VDGCAVQTCDL Trigger: AAGATCACAGGTCTGAACAGCACATCCATCCACTCAGAGAAGTCTCAGGTGGAAAGGAGGGACATCCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 72 bp | CTGGGTTTTAGAAAACGACTTTACAGGCTCTTCAGATaGGTGGCTGTCCTTCACACCCTCATCAGGTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGFRKRLYRLFR*VAVLHTLIRSC Trigger: ACAGGACCTGATGAGGGTGTGAAGGACAGCCACCCATCTGAAGAGCCTGTAAAGTCGTTTTCTAAAACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CAA 90 bp | TTCTGTGAACTGCTCTTTTCGTGTTTCCTAATAATGTCCATGAGGTaGGCCCCCGTGACCAGGCTGTTCTGTGTCTGTCTGTCTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FCELLFSCFLIMSMR*APVTRLFCVCLSFC Trigger: GCAGAAAGACAGACAGACACAGAACAGCCTGGTCACGGGGGCCAACCTCATGGACATTATTAGGAAACACGAAAAGAGCAGTTCACAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 72 bp | GTTTTAGAAAACGACTTTACAGGCTCTTCAGATGGGTaGCTGTCCTTCACACCCTCATCAGGTCCTGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VLENDFTGSSDG*LSFTPSSGPVE Trigger: TTCCACAGGACCTGATGAGGGTGTGAAGGACAGCCACCCATCTGAAGAGCCTGTAAAGTCGTTTTCTAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 72 bp | ATGCAGAAGCTGGTCTGTGAGCTGTTCTATGCTATCTaGAATGGTGGCAGAAACCAAGATGGTCTGACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: MQKLVCELFYAI*NGGRNQDGLTV Trigger: GACTGTCAGACCATCTTGGTTTCTGCCACCATTCCAGATAGCATAGAACAGCTCACAGACCAGCTTCTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 72 bp | TCCCCAGTGATGATCCTCACAGGATTATGCAGAAGCTaGTCTGTGAGCTGTTCTATGCTATCTGGAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SPVMILTGLCRS*SVSCSMLSGMV Trigger: CACCATTCCAGATAGCATAGAACAGCTCACAGACCAGCTTCTGCATAATCCTGTGAGGATCATCACTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CAA 72 bp | TGTGGCGGGAGAATGGATCCCGTGGGCTTCACTCTTTaGGCAACATCCCAGAAGAGTCTTTTAGAGTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: CGGRMDPVGFTL*ATSQKSLLELL Trigger: TAACAACTCTAAAAGACTCTTCTGGGATGTTGCCAAAAGAGTGAAGCCCACGGGATCCATTCTCCCGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CAA 90 bp | CTTAATGATCCTTCCCCTTCCTTAACTTGTAGCAGATGCTTCGCTTaGCACTCCAAGCTACACACGTCTTCGTCCGTCTTGTCACAGATA | + |
|
Preference number: 6 (lower is better) Translates to: LNDPSPSLTCSRCFA*HSKLHTSSSVLSQI Trigger: TATCTGTGACAAGACGGACGAAGACGTGTGTAGCTTGGAGTGCAAAGCGAAGCATCTGCTACAAGTTAAGGAAGGGGAAGGATCATTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS TCA 72 bp | TCGAAGTCGATAATGGGCCTGGCAACGTCTTGTCCTTaGACTGAGATTCCTAGCTGCTGTTTAAGGGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SKSIMGLATSCP*TEIPSCCLRVS Trigger: TGAAACCCTTAAACAGCAGCTAGGAATCTCAGTTCAAGGACAAGACGTTGCCAGGCCCATTATCGACTTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 72 bp | ACTGAGATTCCTAGCTGCTGTTTAAGGGTTTCAATCTaGTCCTCCTTGAGGGTCACAATAAAGGGGTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TEIPSCCLRVSI*SSLRVTIKGCS Trigger: AGAGCACCCCTTTATTGTGACCCTCAAGGAGGACCAGATTGAAACCCTTAAACAGCAGCTAGGAATCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
||
| CDS CCA 72 bp | GTTCTATGCTATCTGGAATGGTGGCAGAAACCAAGATaGTCTGACAGTCACCAGGAGTGTGTTCCAAAACGT | + |
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Preference number: 6 (lower is better) Translates to: VLCYLEWWQKPR*SDSHQECVPKR Trigger: ACGTTTTGGAACACACTCCTGGTGACTGTCAGACCATCTTGGTTTCTGCCACCATTCCAGATAGCATAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS CCA 72 bp | CGTCAAGCACTTGCTGCTGAAAGCCCATCTTCAACATaGTGTCAGCTTCGTCTACTACGACAATTTTTATGC | + |
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Preference number: 6 (lower is better) Translates to: RQALAAESPSST*CQLRLLRQFLC Trigger: GCATAAAAATTGTCGTAGTAGACGAAGCTGACACCATGTTGAAGATGGGCTTTCAGCAGCAAGTGCTTGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS CAA 72 bp | AGAGTTGTTATTGATGAATGTGATTGCAGTTCCATTTaGACCGAGTCTCCCAACTCTGCCAACCTGGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: RVVIDECDCSSI*TESPNSANLVH Trigger: GTGCACCAGGTTGGCAGAGTTGGGAGACTCGGTCAAAATGGAACTGCAATCACATTCATCAATAACAACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS CAA 90 bp | GAGTCTTTTAGAGTTGTTATTGATGAATGTGATTGCAGTTCCATTTaGACCGAGTCTCCCAACTCTGCCAACCTGGTGCACATACTCATC | + |
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Preference number: 6 (lower is better) Translates to: ESFRVVIDECDCSSI*TESPNSANLVHILI Trigger: GATGAGTATGTGCACCAGGTTGGCAGAGTTGGGAGACTCGGTCAAAATGGAACTGCAATCACATTCATCAATAACAACTCTAAAAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS CAA 90 bp | TTTAATAGCTGTGGCGGGAGAATGGATCCCGTGGGCTTCACTCTTTaGGCAACATCCCAGAAGAGTCTTTTAGAGTTGTTATTGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: FNSCGGRMDPVGFTL*ATSQKSLLELLLMN Trigger: ATTCATCAATAACAACTCTAAAAGACTCTTCTGGGATGTTGCCAAAAGAGTGAAGCCCACGGGATCCATTCTCCCGCCACAGCTATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS GCA 72 bp | GAAGAGTCTTTTAGAGTTGTTATTGATGAATGTGATTaGAGTTCCATTTTGACCGAGTCTCCCAACTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: EESFRVVIDECD*SSILTESPNSA Trigger: GGCAGAGTTGGGAGACTCGGTCAAAATGGAACTGCAATCACATTCATCAATAACAACTCTAAAAGACTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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| CDS TCA 72 bp | AGCTTCGTCTACTACGACAATTTTTATGCCACTGAGTaGTACGGAGCTCTGTTTAATTATATCCAGAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: SFVYYDNFYATE*YGALFNYIQKS Trigger: CGACTTCTGGATATAATTAAACAGAGCTCCGTATCACTCAGTGGCATAAAAATTGTCGTAGTAGACGAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027655.8 |
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