Pregenerated sensors for DDX52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020677Ensembl transcript IDs: ENSMUST00000049257.8
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACACTAAAGGGAGTGCTAGGCTCCTTCCTGTGTCTGGCCTGTGCTaGTGCTCTTGTTTGCATCCCACACAGCGCTGGCTCTCCATACAC | + |
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Preference number: 1 (lower is better) Translates to: NTKGSARLLPVSGLC*CSCLHPTQRWLSIH Trigger: GTGTATGGAGAGCCAGCGCTGTGTGGGATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGAGCCTAGCACTCCCTTTAGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CCA 90 bp | GTGTCTGGCCTGTGCTGCTGCTCTTGTTTGCATCCCACACAGCGCTaGCTCTCCATACACACAAGTGTGGATGGTGCACTCAAACTCAAG | + |
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Preference number: 1 (lower is better) Translates to: VSGLCCCSCLHPTQR*LSIHTSVDGALKLK Trigger: CTTGAGTTTGAGTGCACCATCCACACTTGTGTGTATGGAGAGCCAGCGCTGTGTGGGATGCAAACAAGAGCAGCAGCACAGGCCAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CCA 90 bp | CTGCATACTGTGCACTGCCTTGGTCCAAATGATCACAGTTCTCTGTaGAGGGTGGCTGAAGCCCATCAAGTCTCAGCAAAGATAAGCATC | + |
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Preference number: 1 (lower is better) Translates to: LHTVHCLGPNDHSSL*RVAEAHQVSAKISI Trigger: GATGCTTATCTTTGCTGAGACTTGATGGGCTTCAGCCACCCTCCACAGAGAACTGTGATCATTTGGACCAAGGCAGTGCACAGTATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR TCA 90 bp | TTGCTGGCAGTCACTTATGTTGTAGTCCTGTGGCAGCACAGGCCCTaGGAAATTCTAGGCTCCAGTCTTAAGTGCTTCAACTTGTACCAA | + |
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Preference number: 1 (lower is better) Translates to: LLAVTYVVVLWQHRP*EILGSSLKCFNLYQ Trigger: TTGGTACAAGTTGAAGCACTTAAGACTGGAGCCTAGAATTTCTCAGGGCCTGTGCTGCCACAGGACTACAACATAAGTGACTGCCAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CCA 90 bp | TACAGGTCAATTTCAACAGGCTCAAGTTTCCAATCCTCTGGAATTTaGATAACCACAGATGGGGGACCTCCTTACTGTGGCTCCTACCAC | + |
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Preference number: 1 (lower is better) Translates to: YRSISTGSSFQSSGI*ITTDGGPPYCGSYH Trigger: GTGGTAGGAGCCACAGTAAGGAGGTCCCCCATCTGTGGTTATCCAAATTCCAGAGGATTGGAAACTTGAGCCTGTTGAAATTGACCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CCA 90 bp | AGTGCAGTACAGGTCAATTTCAACAGGCTCAAGTTTCCAATCCTCTaGAATTTGGATAACCACAGATGGGGGACCTCCTTACTGTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: SAVQVNFNRLKFPIL*NLDNHRWGTSLLWL Trigger: GAGCCACAGTAAGGAGGTCCCCCATCTGTGGTTATCCAAATTCCAGAGGATTGGAAACTTGAGCCTGTTGAAATTGACCTGTACTGCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR TCA 90 bp | TTCCAGACGCCTCTCCACAGCATGCATCACACTTTCCTTCACACTTaGAGGGCAAAATCCTTAAGAGTTCACCACACTTGGGTGTTATTT | + |
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Preference number: 1 (lower is better) Translates to: FQTPLHSMHHTFLHT*RAKSLRVHHTWVLF Trigger: AAATAACACCCAAGTGTGGTGAACTCTTAAGGATTTTGCCCTTCAAGTGTGAAGGAAAGTGTGATGCATGCTGTGGAGAGGCGTCTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR GCA 90 bp | GTATCGTGTAACGGGAATGTTCTTCCTCATCAGGATAGGATAGAGTaGTATCTGCTTTCAGGCAGTCATCTTGGTGGAAAGAGACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: VSCNGNVLPHQDRIE*YLLSGSHLGGKRQE Trigger: TTCCTGTCTCTTTCCACCAAGATGACTGCCTGAAAGCAGATAGCACTCTATCCTATCCTGATGAGGAAGAACATTCCCGTTACACGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR GCA 90 bp | TACAGTTGCAACATTATGACAGCTAAGCATAAGCTTCCTCCCCAGTaGAGTACAGGTCAATTTCAACAGGCTCAAGTTTCCAATCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: YSCNIMTAKHKLPPQ*STGQFQQAQVSNPL Trigger: CAGAGGATTGGAAACTTGAGCCTGTTGAAATTGACCTGTACTGCACTGGGGAGGAAGCTTATGCTTAGCTGTCATAATGTTGCAACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR TCA 90 bp | TGCCTGTTATTTTCATTGTATAAATCCCACCTACAAAGTGAAGCTTaGTGCATCACTACATCAGAACCATTCTGTCCTCTCATATCCTTG | + |
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Preference number: 1 (lower is better) Translates to: CLLFSLYKSHLQSEA*CITTSEPFCPLISL Trigger: CAAGGATATGAGAGGACAGAATGGTTCTGATGTAGTGATGCATCAAGCTTCACTTTGTAGGTGGGATTTATACAATGAAAATAACAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCATACTGTGCACTGCCTTGGTCCAAATGATCACAGTTCTCTGTGGAGGGCCTGTGTCTGGCCTGTaGTGCTGCTCTTGTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: TCILCTALVQMITVLCGGPVSGL*CCSCLH Trigger: ATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGG...CCCTCCACAGAGAACTGTGATCATTTGGACCAAGGCAGTGCACAGTATGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGTGCTAGGCTCCTTCCTGTGTCTGGCCTGTGCTGCTGCTCTTGTTTGCATCGGATTCAGGCAGAAATaGCAATGCCTGTTATTTTCA | + |
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Preference number: 2 (lower is better) Translates to: GVLGSFLCLACAAALVCIGFRQK*QCLLFS Trigger: TGAAAATAACAGGCATTGGCATTTCTGCCTGAATCC...GATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGAGCCTAGCACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CAA 90 bp | GTACAGGTCAATTTCAACAGGCTCAAGTTTCCAATCCTCTGGAATTaGGATAACCACAGATGGGGGACCTCCTTACTGTGGCTCCTACCA | + |
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Preference number: 2 (lower is better) Translates to: VQVNFNRLKFPILWN*DNHRWGTSLLWLLP Trigger: TGGTAGGAGCCACAGTAAGGAGGTCCCCCATCTGTGGTTATCCAAATTCCAGAGGATTGGAAACTTGAGCCTGTTGAAATTGACCTGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAATGATCACAGTTCTCTGTGGAGGGTGGCTGAAGCCCATCAAGTCTCAGCATTAAATGATGGAGAATaGAGTCAGACAGGGAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: PNDHSSLWRVAEAHQVSALNDGE*SQTGKG Trigger: GCCTTTCCCTGTCTGACTTCATTCTCCATCATTTAA...TGCTGAGACTTGATGGGCTTCAGCCACCCTCCACAGAGAACTGTGATCATTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CAA 90 bp | GTTCCAGACGCCTCTCCACAGCATGCATCACACTTTCCTTCACACTaGAAGGGCAAAATCCTTAAGAGTTCACCACACTTGGGTGTTATT | + |
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Preference number: 2 (lower is better) Translates to: VPDASPQHASHFPSH*KGKILKSSPHLGVI Trigger: AATAACACCCAAGTGTGGTGAACTCTTAAGGATTTTGCCCTTCAAGTGTGAAGGAAAGTGTGATGCATGCTGTGGAGAGGCGTCTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CAA 90 bp | CTAAAGTATCAACTGCCTAGAGTAAAGGAAACAGGCTTAATTCAGTaGCTGGCAGTCACTTATGTTGTAGTCCTGTGGCAGCACAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LKYQLPRVKETGLIQ*LAVTYVVVLWQHRP Trigger: GGGCCTGTGCTGCCACAGGACTACAACATAAGTGACTGCCAGCAACTGAATTAAGCCTGTTTCCTTTACTCTAGGCAGTTGATACTTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCTTAATTCAGTTGCTGGCAGTCACTTATGTTGTAGTCCTGTGGCAGCACAGCAGGATAGGATAGAGTaGTATCTGCTTTCAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: RLNSVAGSHLCCSPVAAQQDRIE*YLLSGS Trigger: ACTGCCTGAAAGCAGATAGCACTCTATCCTATCCTG...CTGTGCTGCCACAGGACTACAACATAAGTGACTGCCAGCAACTGAATTAAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR GCA 90 bp | AACATTATGACAGCTAAGCATAAGCTTCCTCCCCAGTGCAGTACAGGTCAATTTCGCCTCTCCACAGCATaGATCACACTTTCCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: NIMTAKHKLPPQCSTGQFRLSTA*ITLSFT Trigger: TGTGAAGGAAAGTGTGATGCATGCTGTGGAGAGGCG...AAATTGACCTGTACTGCACTGGGGAGGAAGCTTATGCTTAGCTGTCATAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAATATCAGTCTCATGTCTGTATTCTCAGCAGTAAAGGGGCTGAAACAGGAGAAAACCTGCATACTGTaGACTGCCTTGGTCCAAATG | + |
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Preference number: 2 (lower is better) Translates to: FNISLMSVFSAVKGLKQEKTCIL*TALVQM Trigger: CATTTGGACCAAGGCAGTGCACAGTATGCAGGTTTT...CTCCTGTTTCAGCCCCTTTACTGCTGAGAATACAGACATGAGACTGATATTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR TCA 90 bp | AAACGAGGTGTATCGTGTAACGGGAATGTTCTTCCTCATCAGGATAGGATAGAGACTTTCCTTCACACTTaGAGGGCAAAATCCTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: KRGVSCNGNVLPHQDRIETFLHT*RAKSLR Trigger: TCTTAAGGATTTTGCCCTTCAAGTGTGAAGGAAAGT...CTCTATCCTATCCTGATGAGGAAGAACATTCCCGTTACACGATACACCTCGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR GCA 90 bp | TACTGTGCTGATTTTAGACTAAAGTATCAACTGCCTAGAGTAAAGGAAACAGGCCACAAGTGTGGATGGTaGACTCAAACTCAAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: YCADFRLKYQLPRVKETGHKCGW*TQTQGF Trigger: AAAACCTTGAGTTTGAGTGCACCATCCACACTTGTG...GCCTGTTTCCTTTACTCTAGGCAGTTGATACTTTAGTCTAAAATCAGCACAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAATATCAGTCTCATGTCTGTATTCTCAGCAGTAAAGGGGCTGAAACAGGAGAAGTTTCCAATCCTCTaGAATTTGGATAACCACAGA | + |
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Preference number: 2 (lower is better) Translates to: FNISLMSVFSAVKGLKQEKFPIL*NLDNHR Trigger: TCTGTGGTTATCCAAATTCCAGAGGATTGGAAACTT...CTCCTGTTTCAGCCCCTTTACTGCTGAGAATACAGACATGAGACTGATATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR GCA 90 bp | GATTTTAGACTAAAGTATCAACTGCCTAGAGTAAAGGAAACAGGCTTAATTCAGAAGCTTCCTCCCCAGTaGAGTACAGGTCAATTTCAA | + |
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Preference number: 2 (lower is better) Translates to: DFRLKYQLPRVKETGLIQKLPPQ*STGQFQ Trigger: TTGAAATTGACCTGTACTGCACTGGGGAGGAAGCTT...CTGAATTAAGCCTGTTTCCTTTACTCTAGGCAGTTGATACTTTAGTCTAAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR GCA 72 bp | GGGAGTGCTAGGCTCCTTCCTGTGTCTGGCCTGTGCTaGTGCTCTTGTTTGCATCCCACACAGCGCTGGCTC | + |
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Preference number: 3 (lower is better) Translates to: GSARLLPVSGLC*CSCLHPTQRWL Trigger: GAGCCAGCGCTGTGTGGGATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGAGCCTAGCACTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR GCA 72 bp | AGTGCTAGGCTCCTTCCTGTGTCTGGCCTGTGCTGCTaGTCTTGTTTGCATCCCACACAGCGCTGGCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: SARLLPVSGLCC*SCLHPTQRWLS Trigger: GGAGAGCCAGCGCTGTGTGGGATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGAGCCTAGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR GCA 72 bp | AAAGGGAGTGCTAGGCTCCTTCCTGTGTCTGGCCTGTaGTGCTGCTCTTGTTTGCATCCCACACAGCGCTGG | + |
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Preference number: 3 (lower is better) Translates to: KGSARLLPVSGL*CCSCLHPTQRW Trigger: CCAGCGCTGTGTGGGATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGAGCCTAGCACTCCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR GCA 72 bp | TCCTTCCTGTGTCTGGCCTGTGCTGCTGCTCTTGTTTaGATCCCACACAGCGCTGGCTCTCCATACACACAA | + |
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Preference number: 3 (lower is better) Translates to: SFLCLACAAALV*IPHSAGSPYTQ Trigger: TTGTGTGTATGGAGAGCCAGCGCTGTGTGGGATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR CAA 90 bp | GATGGGGGACCTCCTTACTGTGGCTCCTACCACAAAGAAACACTAAAGGGAGTGCCTGTGCTGCTGCTCTaGTTTGCATCCCACACAGCG | + |
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Preference number: 3 (lower is better) Translates to: DGGPPYCGSYHKETLKGVPVLLL*FASHTA Trigger: CGCTGTGTGGGATGCAAACAAGAGCAGCAGCACAGG...CACTCCCTTTAGTGTTTCTTTGTGGTAGGAGCCACAGTAAGGAGGTCCCCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CCA 72 bp | GTGCACTGCCTTGGTCCAAATGATCACAGTTCTCTGTaGAGGGTGGCTGAAGCCCATCAAGTCTCAGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: VHCLGPNDHSSL*RVAEAHQVSAK Trigger: CTTTGCTGAGACTTGATGGGCTTCAGCCACCCTCCACAGAGAACTGTGATCATTTGGACCAAGGCAGTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGTGCTAGGCTCCTTCCTGTGTCTGGCCTGTGCTGCTGCTCTTGTTTGCATCTGTCCTCTCATATCCTaGTGGATTTCAAATGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: GVLGSFLCLACAAALVCICPLIS*WISNVW Trigger: CCAAACATTTGAAATCCACAAGGATATGAGAGGACA...GATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGAGCCTAGCACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR TCA 72 bp | GTCACTTATGTTGTAGTCCTGTGGCAGCACAGGCCCTaGGAAATTCTAGGCTCCAGTCTTAAGTGCTTCAAC | + |
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Preference number: 3 (lower is better) Translates to: VTYVVVLWQHRP*EILGSSLKCFN Trigger: GTTGAAGCACTTAAGACTGGAGCCTAGAATTTCTCAGGGCCTGTGCTGCCACAGGACTACAACATAAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR TCA 72 bp | CCTCTCCACAGCATGCATCACACTTTCCTTCACACTTaGAGGGCAAAATCCTTAAGAGTTCACCACACTTGG | + |
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Preference number: 3 (lower is better) Translates to: PLHSMHHTFLHT*RAKSLRVHHTW Trigger: CCAAGTGTGGTGAACTCTTAAGGATTTTGCCCTTCAAGTGTGAAGGAAAGTGTGATGCATGCTGTGGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CCA 72 bp | AATTTGGATAACCACAGATGGGGGACCTCCTTACTGTaGCTCCTACCACAAAGAAACACTAAAGGGAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: NLDNHRWGTSLL*LLPQRNTKGSA Trigger: AGCACTCCCTTTAGTGTTTCTTTGTGGTAGGAGCCACAGTAAGGAGGTCCCCCATCTGTGGTTATCCAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CCA 72 bp | AAGTTTCCAATCCTCTGGAATTTGGATAACCACAGATaGGGGACCTCCTTACTGTGGCTCCTACCACAAAGA | + |
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Preference number: 3 (lower is better) Translates to: KFPILWNLDNHR*GTSLLWLLPQR Trigger: TCTTTGTGGTAGGAGCCACAGTAAGGAGGTCCCCCATCTGTGGTTATCCAAATTCCAGAGGATTGGAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CCA 72 bp | ATTTCAACAGGCTCAAGTTTCCAATCCTCTGGAATTTaGATAACCACAGATGGGGGACCTCCTTACTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: ISTGSSFQSSGI*ITTDGGPPYCG Trigger: GCCACAGTAAGGAGGTCCCCCATCTGTGGTTATCCAAATTCCAGAGGATTGGAAACTTGAGCCTGTTGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR GCA 72 bp | AAGCAGGTAATTAAGGAAAACCTGCATACTGTGCACTaGCTTGGTCCAAATGATCACAGTTCTCTGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: KQVIKENLHTVH*LGPNDHSSLWR Trigger: CCTCCACAGAGAACTGTGATCATTTGGACCAAGGCAGTGCACAGTATGCAGGTTTTCCTTAATTACCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR GCA 72 bp | AACATTATGACAGCTAAGCATAAGCTTCCTCCCCAGTaGAGTACAGGTCAATTTCAACAGGCTCAAGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: NIMTAKHKLPPQ*STGQFQQAQVS Trigger: GGAAACTTGAGCCTGTTGAAATTGACCTGTACTGCACTGGGGAGGAAGCTTATGCTTAGCTGTCATAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CCA 72 bp | ATCCCACACAGCGCTGGCTCTCCATACACACAAGTGTaGATGGTGCACTCAAACTCAAGGTTTTATTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: IPHSAGSPYTQV*MVHSNSRFYFK Trigger: TTTAAAATAAAACCTTGAGTTTGAGTGCACCATCCACACTTGTGTGTATGGAGAGCCAGCGCTGTGTGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR-3UTR CAA 90 bp | AACATTATGACAGCTAAGCATAAGCTTCCTCCCCAGTGCAGTACAGGTCAATTTGTTACACTGCAGGGATaGCCTTCTAAGGTATTTATT | + |
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Preference number: 3 (lower is better) Translates to: NIMTAKHKLPPQCSTGQFVTLQG*PSKVFI Trigger: AATAAATACCTTAGAAGGCAATCCCTGCAGTGTAAC...AAATTGACCTGTACTGCACTGGGGAGGAAGCTTATGCTTAGCTGTCATAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR TCA 72 bp | TTTTCATTGTATAAATCCCACCTACAAAGTGAAGCTTaGTGCATCACTACATCAGAACCATTCTGTCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: FSLYKSHLQSEA*CITTSEPFCPL Trigger: GAGAGGACAGAATGGTTCTGATGTAGTGATGCATCAAGCTTCACTTTGTAGGTGGGATTTATACAATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CCA 90 bp | CCTGTGTCTGGCCTGTGCTGCTGCTCTTGTTTGCATCCCACACAGCGCTGGCTCTGCAAGTTCTCGGGTTaGGGATATAACCAGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PVSGLCCCSCLHPTQRWLCKFSG*GYNQGS Trigger: AGAGCCCTGGTTATATCCCCAACCCGAGAACTTGCA...GAGCCAGCGCTGTGTGGGATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CAA 72 bp | CTCCTTCCTGTGTCTGGCCTGTGCTGCTGCTCTTGTTaGCATCCCACACAGCGCTGGCTCTCCATACACACA | + |
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Preference number: 4 (lower is better) Translates to: LLPVSGLCCCSC*HPTQRWLSIHT Trigger: TGTGTGTATGGAGAGCCAGCGCTGTGTGGGATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR GCA 90 bp | GGAGTGCTAGGCTCCTTCCTGTGTCTGGCCTGTGCTGCTGCTCTTGTTTGCATCACAGGACAACCAGCCTaGTGGATAACATTGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: GVLGSFLCLACAAALVCITGQPA*WITLAT Trigger: TGTTGCCAATGTTATCCAGCAGGCTGGTTGTCCTGT...GATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGAGCCTAGCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR TCA 90 bp | GGAGTGCTAGGCTCCTTCCTGTGTCTGGCCTGTGCTGCTGCTCTTGTTTGCATCTCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: GVLGSFLCLACAAALVCISWSSC*NVAIGS Trigger: TGACCCAATTGCTACATTTCAGCAACTTGACCAGGA...GATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGAGCCTAGCACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR GCA 90 bp | GGAGTGCTAGGCTCCTTCCTGTGTCTGGCCTGTGCTGCTGCTCTTGTTTGCATCGAGTTTCTTTCTTCTTaGTGTTTTGGCCAGCAACCT | + |
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Preference number: 4 (lower is better) Translates to: GVLGSFLCLACAAALVCIEFLSS*CFGQQP Trigger: AGGTTGCTGGCCAAAACAGCAAGAAGAAAGAAACTC...GATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGAGCCTAGCACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR TCA 90 bp | GATGGGGGACCTCCTTACTGTGGCTCCTACCACAAAGAAACACTAAAGGGAGTGCCGTCAAAGTCTTCTTaGGCAGGAACTTCTGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: DGGPPYCGSYHKETLKGVPSKSS*AGTSEV Trigger: GACTTCAGAAGTTCCTGCTCAAGAAGACTTTGACGG...CACTCCCTTTAGTGTTTCTTTGTGGTAGGAGCCACAGTAAGGAGGTCCCCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CCA 90 bp | AGGCTTAATTCAGTTGCTGGCAGTCACTTATGTTGTAGTCCTGTGGCAGCACAGCTTCCCAGATCCGGTTaGAGCAGAAGCCAGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RLNSVAGSHLCCSPVAAQLPRSG*SRSQKF Trigger: GAACTTCTGGCTTCTGCTCCAACCGGATCTGGGAAG...CTGTGCTGCCACAGGACTACAACATAAGTGACTGCCAGCAACTGAATTAAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CCA 90 bp | CCAAATGATCACAGTTCTCTGTGGAGGGTGGCTGAAGCCCATCAAGTCTCAGCATGTTTTCTCCTCATTTaGGGGCTCCTGGTGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: PNDHSSLWRVAEAHQVSACFLLI*GLLVYL Trigger: CAAATACACCAGGAGCCCCCAAATGAGGAGAAAACA...TGCTGAGACTTGATGGGCTTCAGCCACCCTCCACAGAGAACTGTGATCATTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR GCA 90 bp | TCCAGACGCCTCTCCACAGCATGCATCACACTTTCCTTCACACTTGAAGGGCAAAAAATGGAAGCCAGCTaGTCTCTAAACCCAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRRLSTACITLSFTLEGQKMEAS*SLNPVL Trigger: CAAAACTGGGTTTAGAGAGCAGCTGGCTTCCATTTT...TTGCCCTTCAAGTGTGAAGGAAAGTGTGATGCATGCTGTGGAGAGGCGTCTGGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR TCA 90 bp | TCCAGACGCCTCTCCACAGCATGCATCACACTTTCCTTCACACTTGAAGGGCAAACTTCTTCTCTCCACTaGCTTTTTCATCTTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRRLSTACITLSFTLEGQTSSLH*LFHLEA Trigger: AGCTTCAAGATGAAAAAGTCAGTGGAGAGAAGAAGT...TTGCCCTTCAAGTGTGAAGGAAAGTGTGATGCATGCTGTGGAGAGGCGTCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR TCA 90 bp | TTCAATATCAGTCTCATGTCTGTATTCTCAGCAGTAAAGGGGCTGAAACAGGAGCGACGTTGTCCAGGTTaGGCTTGCACCACTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FNISLMSVFSAVKGLKQERRCPG*ACTTVQ Trigger: TTGAACAGTGGTGCAAGCTCAACCTGGACAACGTCG...CTCCTGTTTCAGCCCCTTTACTGCTGAGAATACAGACATGAGACTGATATTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR GCA 90 bp | AGGCTTAATTCAGTTGCTGGCAGTCACTTATGTTGTAGTCCTGTGGCAGCACAGGGCTCCTGGTGTATTTaGAATGCTCCACATTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RLNSVAGSHLCCSPVAAQGSWCI*NAPHSS Trigger: AGATGAATGTGGAGCATTGCAAATACACCAGGAGCC...CTGTGCTGCCACAGGACTACAACATAAGTGACTGCCAGCAACTGAATTAAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR GCA 90 bp | ACCTGCATACTGTGCACTGCCTTGGTCCAAATGATCACAGTTCTCTGTGGAGGGTTCATCTTGAAGCTTTaGTTCTACAGAGGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TCILCTALVQMITVLCGGFILKL*FYRGCP Trigger: TGGACATCCTCTGTAGAAGCAAAGCTTCAAGATGAA...CCCTCCACAGAGAACTGTGATCATTTGGACCAAGGCAGTGCACAGTATGCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR GCA 90 bp | TCCAGACGCCTCTCCACAGCATGCATCACACTTTCCTTCACACTTGAAGGGCAAGTTGGTTGTTTCAGCTaGATTAAAATGGGGATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SRRLSTACITLSFTLEGQVGCFS*IKMGML Trigger: TAGCATCCCCATTTTAATGCAGCTGAAACAACCAAC...TTGCCCTTCAAGTGTGAAGGAAAGTGTGATGCATGCTGTGGAGAGGCGTCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAATTCAGTTGCTGGCAGTCACTTATGTTGTAGTCCTGTGGCAGCACAGTTGGAGTTGTACAAATaGTCTCCCTTTCCAACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLNSVAGSHLCCSPVAAQLELYK*SPFPTA Trigger: AGCCGTTGGAAAGGGAGAGCATTTGTACAACTCCAA...CTGTGCTGCCACAGGACTACAACATAAGTGACTGCCAGCAACTGAATTAAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CCA 90 bp | CCAAATGATCACAGTTCTCTGTGGAGGGTGGCTGAAGCCCATCAAGTCTCAGCAGTAGATCAGTCGATTTaGAGTAGTCACAAGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: PNDHSSLWRVAEAHQVSAVDQSI*SSHKDI Trigger: GATATCCTTGTGACTACTCCAAATCGACTGATCTAC...TGCTGAGACTTGATGGGCTTCAGCCACCCTCCACAGAGAACTGTGATCATTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CAA 72 bp | GCCTCTCCACAGCATGCATCACACTTTCCTTCACACTaGAAGGGCAAAATCCTTAAGAGTTCACCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASPQHASHFPSH*KGKILKSSPHL Trigger: CAAGTGTGGTGAACTCTTAAGGATTTTGCCCTTCAAGTGTGAAGGAAAGTGTGATGCATGCTGTGGAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR TCA 90 bp | AAACGAGGTGTATCGTGTAACGGGAATGTTCTTCCTCATCAGGATAGGATAGAGTGCTCCACATTCATCTaGGACGGACTTCTTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRGVSCNGNVLPHQDRIECSTFI*DGLLVS Trigger: GGAAACAAGAAGTCCGTCTCAGATGAATGTGGAGCA...CTCTATCCTATCCTGATGAGGAAGAACATTCCCGTTACACGATACACCTCGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR GCA 90 bp | TTCAATATCAGTCTCATGTCTGTATTCTCAGCAGTAAAGGGGCTGAAACAGGAGTCTGTGAATCTGGCTTaGAAGTTCTCGGGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FNISLMSVFSAVKGLKQESVNLA*KFSGWG Trigger: TCCCCAACCCGAGAACTTGCAAGCCAGATTCACAGA...CTCCTGTTTCAGCCCCTTTACTGCTGAGAATACAGACATGAGACTGATATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGCATACTGTGCACTGCCTTGGTCCAAATGATCACAGTTCTCTGTGGAGGGTCCAAATTTCTTAGCTaGTATTGCAGCTTTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TCILCTALVQMITVLCGGSKFLS*YCSFVD Trigger: ATCCACAAAGCTGCAATAGCAGCTAAGAAATTTGGA...CCCTCCACAGAGAACTGTGATCATTTGGACCAAGGCAGTGCACAGTATGCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR GCA 90 bp | AAACGAGGTGTATCGTGTAACGGGAATGTTCTTCCTCATCAGGATAGGATAGAGGACTGCAGAATTCCTTaGTCCAATGGACACGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRGVSCNGNVLPHQDRIEDCRIP*SNGHGN Trigger: GTTTCCGTGTCCATTGGAGCAAGGAATTCTGCAGTC...CTCTATCCTATCCTGATGAGGAAGAACATTCCCGTTACACGATACACCTCGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGACGCCTCTCCACAGCATGCATCACACTTTCCTTCACACTTGAAGGGCAAGAAAACAAGAACAGGTaGCTTGAAACCCTTTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRRLSTACITLSFTLEGQENKNR*LETLFN Trigger: GTTAAAAAGGGTTTCAAGCCACCTGTTCTTGTTTTC...TTGCCCTTCAAGTGTGAAGGAAAGTGTGATGCATGCTGTGGAGAGGCGTCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAGAGTTCACCACACTTGGGTGTTATTTTAGCATCGGCTCTTGTTCTTCTACCTGCTCTGAAGCTGTaGACTGTGTTATCTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSSPHLGVILASALVLLPALKL*TVLSRC Trigger: GCAGCGAGATAACACAGTCCACAGCTTCAGAGCAGG...TAGAAGAACAAGAGCCGATGCTAAAATAACACCCAAGTGTGGTGAACTCTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CAA 72 bp | AATTTCAACAGGCTCAAGTTTCCAATCCTCTGGAATTaGGATAACCACAGATGGGGGACCTCCTTACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFNRLKFPILWN*DNHRWGTSLLW Trigger: CCACAGTAAGGAGGTCCCCCATCTGTGGTTATCCAAATTCCAGAGGATTGGAAACTTGAGCCTGTTGAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| 3UTR CAA 72 bp | CAACTGCCTAGAGTAAAGGAAACAGGCTTAATTCAGTaGCTGGCAGTCACTTATGTTGTAGTCCTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLPRVKETGLIQ*LAVTYVVVLWQ Trigger: CTGCCACAGGACTACAACATAAGTGACTGCCAGCAACTGAATTAAGCCTGTTTCCTTTACTCTAGGCAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR TCA 90 bp | AGGCTTAATTCAGTTGCTGGCAGTCACTTATGTTGTAGTCCTGTGGCAGCACAGTTGAGCAGGAACTTCTaGAGTCATCTTCTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLNSVAGSHLCCSPVAAQLSRNF*SHLLSL Trigger: AAGAGAAAGAAGATGACTTCAGAAGTTCCTGCTCAA...CTGTGCTGCCACAGGACTACAACATAAGTGACTGCCAGCAACTGAATTAAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CCA 90 bp | CCAAATGATCACAGTTCTCTGTGGAGGGTGGCTGAAGCCCATCAAGTCTCAGCAGCGTCTAGAATATTCTaGAGCAATCTAGAATTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PNDHSSLWRVAEAHQVSAASRIF*SNLELI Trigger: AATCAATTCTAGATTGCTCCAGAATATTCTAGACGC...TGCTGAGACTTGATGGGCTTCAGCCACCCTCCACAGAGAACTGTGATCATTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR TCA 90 bp | ACACTTGGGTGTTATTTTAGCATCGGCTCTTGTTCTTCTATAAGAAGTATCTCTGGAATGGCTTGCATCTaGATTGGTGTGGGCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLGCYFSIGSCSSIRSISGMACI*IGVGTW Trigger: CCAAGTGCCCACACCAATTCAGATGCAAGCCATTCC...AGAGATACTTCTTATAGAAGAACAAGAGCCGATGCTAAAATAACACCCAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR GCA 90 bp | TACTGTGCTGATTTTAGACTAAAGTATCAACTGCCTAGAGTAAAGGAAACAGGCCTTTCCCCTATTCCCTaGTCTTCCAGTCCGACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: YCADFRLKYQLPRVKETGLSPIP*SSSPTY Trigger: ATAGGTCGGACTGGAAGAGCAGGGAATAGGGGAAAG...GCCTGTTTCCTTTACTCTAGGCAGTTGATACTTTAGTCTAAAATCAGCACAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CCA 90 bp | TTCAATATCAGTCTCATGTCTGTATTCTCAGCAGTAAAGGGGCTGAAACAGGAGCTGAAATGTAGCAATTaGGTCAGGAAGATCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FNISLMSVFSAVKGLKQELKCSN*VRKISS Trigger: GGAACTGATCTTCCTGACCCAATTGCTACATTTCAG...CTCCTGTTTCAGCCCCTTTACTGCTGAGAATACAGACATGAGACTGATATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CCA 90 bp | AACATTATGACAGCTAAGCATAAGCTTCCTCCCCAGTGCAGTACAGGTCAATTTACCATGCAGCATAACTaGAATGGCTTGCATCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NIMTAKHKLPPQCSTGQFTMQHN*NGLHLN Trigger: ATTCAGATGCAAGCCATTCCAGTTATGCTGCATGGT...AAATTGACCTGTACTGCACTGGGGAGGAAGCTTATGCTTAGCTGTCATAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| 3UTR CAA 72 bp | CACTTGAAGGGCAAAATCCTTAAGAGTTCACCACACTaGGGTGTTATTTTAGCATCGGCTCTTGTTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HLKGKILKSSPH*GVILASALVLL Trigger: TAGAAGAACAAGAGCCGATGCTAAAATAACACCCAAGTGTGGTGAACTCTTAAGGATTTTGCCCTTCAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR GCA 90 bp | AACATTATGACAGCTAAGCATAAGCTTCCTCCCCAGTGCAGTACAGGTCAATTTCTGCTGTGTTCTTTCTaGATGAATGACATCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: NIMTAKHKLPPQCSTGQFLLCSF*MNDIHI Trigger: AATGTGGATGTCATTCATGCAGAAAGAACACAGCAG...AAATTGACCTGTACTGCACTGGGGAGGAAGCTTATGCTTAGCTGTCATAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CCA 90 bp | GATTTTAGACTAAAGTATCAACTGCCTAGAGTAAAGGAAACAGGCTTAATTCAGGTCCGACCTATCCTATaGATGTACTCCACTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DFRLKYQLPRVKETGLIQVRPIL*MYSTEL Trigger: CAGCTCAGTGGAGTACATCCATAGGATAGGTCGGAC...CTGAATTAAGCCTGTTTCCTTTACTCTAGGCAGTTGATACTTTAGTCTAAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CCA 90 bp | ACACTTGGGTGTTATTTTAGCATCGGCTCTTGTTCTTCTATAAGAAGTATCTCTGGACAACCAGCCTGCTaGATAACATTGGCAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: TLGCYFSIGSCSSIRSISGQPAC*ITLATL Trigger: AAGTGTTGCCAATGTTATCCAGCAGGCTGGTTGTCC...AGAGATACTTCTTATAGAAGAACAAGAGCCGATGCTAAAATAACACCCAAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR TCA 90 bp | TACTGTGCTGATTTTAGACTAAAGTATCAACTGCCTAGAGTAAAGGAAACAGGCTTCAAACAGTTTGTCTaGTTCATCTACTACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YCADFRLKYQLPRVKETGFKQFV*FIYYQP Trigger: TGGCTGGTAGTAGATGAATCAGACAAACTGTTTGAA...GCCTGTTTCCTTTACTCTAGGCAGTTGATACTTTAGTCTAAAATCAGCACAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR TCA 90 bp | TACTGTGCTGATTTTAGACTAAAGTATCAACTGCCTAGAGTAAAGGAAACAGGCAAATTTTTCCTGCTCTaGAGCTGTGGACTGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YCADFRLKYQLPRVKETGKFFLL*SCGLCY Trigger: ATAACACAGTCCACAGCTTCAGAGCAGGAAAAATTT...GCCTGTTTCCTTTACTCTAGGCAGTTGATACTTTAGTCTAAAATCAGCACAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CCA 90 bp | AACATTATGACAGCTAAGCATAAGCTTCCTCCCCAGTGCAGTACAGGTCAATTTGCTATTGCAGCTTTGTaGATCATATGTATTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NIMTAKHKLPPQCSTGQFAIAAL*IICILN Trigger: ATTCAGAATACATATGATCCACAAAGCTGCAATAGC...AAATTGACCTGTACTGCACTGGGGAGGAAGCTTATGCTTAGCTGTCATAATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR TCA 90 bp | ACACTTGGGTGTTATTTTAGCATCGGCTCTTGTTCTTCTATAAGAAGTATCTCTGGATCATATGTATTCTaGATCCTGTACCCTCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: TLGCYFSIGSCSSIRSISGSYVF*ILYPQI Trigger: TATCTGAGGGTACAGGATTCAGAATACATATGATCC...AGAGATACTTCTTATAGAAGAACAAGAGCCGATGCTAAAATAACACCCAAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR GCA 90 bp | ACACTTGGGTGTTATTTTAGCATCGGCTCTTGTTCTTCTATAAGAAGTATCTCTTTTCTTAGCTGCTATTaGAGCTTTGTGGATCATATG | + |
|
Preference number: 4 (lower is better) Translates to: TLGCYFSIGSCSSIRSISFLSCY*SFVDHM Trigger: CATATGATCCACAAAGCTGCAATAGCAGCTAAGAAA...AGAGATACTTCTTATAGAAGAACAAGAGCCGATGCTAAAATAACACCCAAGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS TCA 90 bp | GGAATCGAATTTCCTTTTTCCTACCTGGAATCGAGTAGCGTCTGCTaGGAAGCGCTTCACGTCGAACTTGGCGCCGGCTCCAAGCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GIEFPFSYLESSSVC*EALHVELGAGSKPA Trigger: CGCCGGCTTGGAGCCGGCGCCAAGTTCGACGTGAAGCGCTTCTCAGCAGACGCTACTCGATTCCAGGTAGGAAAAAGGAAATTCGATTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS GCA 90 bp | GTCCAGGTTGAGCTTGCACCACTGTTCAACGTCGTACGCAAAAGTTaGGCTGAACATTGCTCTTCTGACCTTGGGCGATGTGCAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VQVELAPLFNVVRKS*AEHCSSDLGRCAGQ Trigger: CTGGCCTGCACATCGCCCAAGGTCAGAAGAGCAATGTTCAGCGCAACTTTTGCGTACGACGTTGAACAGTGGTGCAAGCTCAACCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | GGAGTGCTAGGCTCCTTCCTGTGTCTGGCCTGTGCTGCTGCTCTTGTTTGCATCCGACTGCAGAATTCCTaGCTCCAATGGACACGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GVLGSFLCLACAAALVCIRLQNS*LQWTRK Trigger: TTTCCGTGTCCATTGGAGCAAGGAATTCTGCAGTCG...GATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGAGCCTAGCACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | CCAAATGATCACAGTTCTCTGTGGAGGGTGGCTGAAGCCCATCAAGTCTCAGCACTCTGTGAATCTGGCTaGCAAGTTCTCGGGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PNDHSSLWRVAEAHQVSALCESG*QVLGLG Trigger: CCCCAACCCGAGAACTTGCAAGCCAGATTCACAGAG...TGCTGAGACTTGATGGGCTTCAGCCACCCTCCACAGAGAACTGTGATCATTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS GCA 90 bp | CTTGCACCACTGTTCAACGTCGTACGCAAAAGTTGCGCTGAACATTaGTCTTCTGACCTTGGGCGATGTGCAGGCCAGGAAAATGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LAPLFNVVRKSCAEH*SSDLGRCAGQENGS Trigger: GCTTCCATTTTCCTGGCCTGCACATCGCCCAAGGTCAGAAGAGCAATGTTCAGCGCAACTTTTGCGTACGACGTTGAACAGTGGTGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR CAA 90 bp | CCAAATGATCACAGTTCTCTGTGGAGGGTGGCTGAAGCCCATCAAGTCTCAGCAACGACGTTGTCCAGGTaGAGCTTGCACCACTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PNDHSSLWRVAEAHQVSATTLSR*SLHHCS Trigger: TGAACAGTGGTGCAAGCTCAACCTGGACAACGTCGT...TGCTGAGACTTGATGGGCTTCAGCCACCCTCCACAGAGAACTGTGATCATTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTGTCTGGCCTGTGCTGCTGCTCTTGTTTGCATCCCACACAGCGCTGGCTCAGAAGTACTTTGGAGTaGTACAAATGCTCTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PVSGLCCCSCLHPTQRWLRSTLE*YKCSPF Trigger: AAAGGGAGAGCATTTGTACAACTCCAAAGTACTTCT...GAGCCAGCGCTGTGTGGGATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS TCA 90 bp | GCCAGAAGTTCCCGACCATGCAGCATAACTGGAATGGCTTGCATCTaGATTGGTGTGGGCACTTGGAAGCCTGCGTCTAGAATATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARSSRPCSITGMACI*IGVGTWKPASRIFW Trigger: CCAGAATATTCTAGACGCAGGCTTCCAAGTGCCCACACCAATTCAGATGCAAGCCATTCCAGTTATGCTGCATGGTCGGGAACTTCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGACGCCTCTCCACAGCATGCATCACACTTTCCTTCACACTTGAAGGGCAAGGGCTCCTGGTGTATTaGCAATGCTCCACATTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SRRLSTACITLSFTLEGQGLLVY*QCSTFI Trigger: GATGAATGTGGAGCATTGCAAATACACCAGGAGCCC...TTGCCCTTCAAGTGTGAAGGAAAGTGTGATGCATGCTGTGGAGAGGCGTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTGCTAGGCTCCTTCCTGTGTCTGGCCTGTGCTGCTGCTCTTGTTTGCATCTTGTTCCGAAAGAAGTaGACCTTTTCCTTTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GVLGSFLCLACAAALVCILFRKK*TFSFLR Trigger: TCTCAGAAAGGAAAAGGTCAACTTCTTTCGGAACAA...GATGCAAACAAGAGCAGCAGCACAGGCCAGACACAGGAAGGAGCCTAGCACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS GCA 90 bp | CTTCTGACCTTGGGCGATGTGCAGGCCAGGAAAATGGAAGCCAGCTaGTCTCTAAACCCAGTTTTGCCATCTTCAAACAGTTTGTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLTLGDVQARKMEAS*SLNPVLPSSNSLSD Trigger: ATCAGACAAACTGTTTGAAGATGGCAAAACTGGGTTTAGAGAGCAGCTGGCTTCCATTTTCCTGGCCTGCACATCGCCCAAGGTCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS CCA 90 bp | TTCAGGACCTCCAAAGACTCGGAATCGAATTTCCTTTTTCCTACCTaGAATCGAGTAGCGTCTGCTGAGAAGCGCTTCACGTCGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FRTSKDSESNFLFPT*NRVASAEKRFTSNL Trigger: CAAGTTCGACGTGAAGCGCTTCTCAGCAGACGCTACTCGATTCCAGGTAGGAAAAAGGAAATTCGATTCCGAGTCTTTGGAGGTCCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR CAA 90 bp | CCAAATGATCACAGTTCTCTGTGGAGGGTGGCTGAAGCCCATCAAGTCTCAGCATCTGAGACGGACTTCTaGTTTCCGAAGAAGTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PNDHSSLWRVAEAHQVSASETDF*FPKKSS Trigger: ACTAGACTTCTTCGGAAACAAGAAGTCCGTCTCAGA...TGCTGAGACTTGATGGGCTTCAGCCACCCTCCACAGAGAACTGTGATCATTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
||
| CDS-3UTR CAA 90 bp | GATGGGGGACCTCCTTACTGTGGCTCCTACCACAAAGAAACACTAAAGGGAGTGGCCTGCTGGATAACATaGGCAACACTTCTTAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: DGGPPYCGSYHKETLKGVACWIT*ATLLSN Trigger: ATTACTAAGAAGTGTTGCCAATGTTATCCAGCAGGC...CACTCCCTTTAGTGTTTCTTTGTGGTAGGAGCCACAGTAAGGAGGTCCCCCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS TCA 90 bp | ATTCCCTGCTCTTCCAGTCCGACCTATCCTATGGATGTACTCCACTaGGCTGGTGGGAAAATCATAATTGATGACCAGGTTTACGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IPCSSSPTYPMDVLH*AGGKIIIDDQVYAF Trigger: AAAGGCGTAAACCTGGTCATCAATTATGATTTTCCCACCAGCTCAGTGGAGTACATCCATAGGATAGGTCGGACTGGAAGAGCAGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | GATGGGGGACCTCCTTACTGTGGCTCCTACCACAAAGAAACACTAAAGGGAGTGGCTCTAAGAAGTACTTaGGAGTTGTACAAATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DGGPPYCGSYHKETLKGVALRST*ELYKCS Trigger: AGAGCATTTGTACAACTCCAAAGTACTTCTTAGAGC...CACTCCCTTTAGTGTTTCTTTGTGGTAGGAGCCACAGTAAGGAGGTCCCCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS GCA 90 bp | GATATAACCAGGGCTCTAAAGCCTTTATTTGTTGGTTGTTTCAGCTaGATTAAAATGGGGATGCTAAATGCCAACGTCTTCCCAGATCCG | + |
|
Preference number: 5 (lower is better) Translates to: DITRALKPLFVGCFS*IKMGMLNANVFPDP Trigger: CGGATCTGGGAAGACGTTGGCATTTAGCATCCCCATTTTAATGCAGCTGAAACAACCAACAAATAAAGGCTTTAGAGCCCTGGTTATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | AACATTATGACAGCTAAGCATAAGCTTCCTCCCCAGTGCAGTACAGGTCAATTTCCTTGGACATGTATCTaGTGCTTGTTCCGAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NIMTAKHKLPPQCSTGQFPWTCI*CLFRKK Trigger: CTTCTTTCGGAACAAGCACAAGATACATGTCCAAGG...AAATTGACCTGTACTGCACTGGGGAGGAAGCTTATGCTTAGCTGTCATAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | ACACTTGGGTGTTATTTTAGCATCGGCTCTTGTTCTTCTATAAGAAGTATCTCTTGGCTTGCATCTGAATaGGTGTGGGCACTTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLGCYFSIGSCSSIRSISWLASE*VWALGS Trigger: GCTTCCAAGTGCCCACACCAATTCAGATGCAAGCCA...AGAGATACTTCTTATAGAAGAACAAGAGCCGATGCTAAAATAACACCCAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | ACACTTGGGTGTTATTTTAGCATCGGCTCTTGTTCTTCTATAAGAAGTATCTCTTCTTCCCAGATCCGGTaGGAGCAGAAGCCAGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TLGCYFSIGSCSSIRSISSSQIR*EQKPEV Trigger: AACTTCTGGCTTCTGCTCCAACCGGATCTGGGAAGA...AGAGATACTTCTTATAGAAGAACAAGAGCCGATGCTAAAATAACACCCAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | GATTTTAGACTAAAGTATCAACTGCCTAGAGTAAAGGAAACAGGCTTAATTCAGTTGTCCAGGTTGAGCTaGCACCACTGTTCAACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DFRLKYQLPRVKETGLIQLSRLS*HHCSTS Trigger: CGACGTTGAACAGTGGTGCAAGCTCAACCTGGACAA...CTGAATTAAGCCTGTTTCCTTTACTCTAGGCAGTTGATACTTTAGTCTAAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS TCA 90 bp | AAGCTGTGGACTGTGTTATCTCGCTGCTGCTGTGTTCTTTCTGCATaGATGACATCCACATTAATACCTTCATATATGAGCTCATGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KLWTVLSRCCCVLSA*MTSTLIPSYMSSWK Trigger: TTTCCATGAGCTCATATATGAAGGTATTAATGTGGATGTCATTCATGCAGAAAGAACACAGCAGCAGCGAGATAACACAGTCCACAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CCA 90 bp | TTCTGGAAACCTTTTATGTATTCGGGCACAGGACAACCAGCCTGCTaGATAACATTGGCAACACTTCTTAGTAATGGTTTATCATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FWKPFMYSGTGQPAC*ITLATLLSNGLSSS Trigger: TGAAGATGATAAACCATTACTAAGAAGTGTTGCCAATGTTATCCAGCAGGCTGGTTGTCCTGTGCCCGAATACATAAAAGGTTTCCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | CTTAAGAGTTCACCACACTTGGGTGTTATTTTAGCATCGGCTCTTGTTCTTCTATTTCATCTTGAAGCTTaGCTTCTACAGAGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKSSPHLGVILASALVLLFHLEA*LLQRMS Trigger: GGACATCCTCTGTAGAAGCAAAGCTTCAAGATGAAA...TAGAAGAACAAGAGCCGATGCTAAAATAACACCCAAGTGTGGTGAACTCTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | TTCAATATCAGTCTCATGTCTGTATTCTCAGCAGTAAAGGGGCTGAAACAGGAGTCTCTAAACCCAGTTTaGCCATCTTCAAACAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FNISLMSVFSAVKGLKQESLNPV*PSSNSL Trigger: CAAACTGTTTGAAGATGGCAAAACTGGGTTTAGAGA...CTCCTGTTTCAGCCCCTTTACTGCTGAGAATACAGACATGAGACTGATATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | ACACTTGGGTGTTATTTTAGCATCGGCTCTTGTTCTTCTATAAGAAGTATCTCTAGAGTTTCTTTCTTCTaGCTGTTTTGGCCAGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: TLGCYFSIGSCSSIRSISRVSFF*LFWPAT Trigger: GGTTGCTGGCCAAAACAGCAAGAAGAAAGAAACTCT...AGAGATACTTCTTATAGAAGAACAAGAGCCGATGCTAAAATAACACCCAAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS TCA 90 bp | TTCTGGAGCAATCTAGAATTGATTTTATATTCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCAGGAAGATCAGTTCCTTGGACATGT | + |
|
Preference number: 5 (lower is better) Translates to: FWSNLELILYSWSSC*NVAIGSGRSVPWTC Trigger: ACATGTCCAAGGAACTGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAATTCTAGATTGCTCCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | CTTAAGAGTTCACCACACTTGGGTGTTATTTTAGCATCGGCTCTTGTTCTTCTAACTGACTTTTTCATCTaGAAGCTTTGCTTCTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LKSSPHLGVILASALVLLTDFFI*KLCFYR Trigger: TCTGTAGAAGCAAAGCTTCAAGATGAAAAAGTCAGT...TAGAAGAACAAGAGCCGATGCTAAAATAACACCCAAGTGTGGTGAACTCTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | TACTGTGCTGATTTTAGACTAAAGTATCAACTGCCTAGAGTAAAGGAAACAGGCCCATCTTCAAACAGTTaGTCTGATTCATCTACTACC | + |
|
Preference number: 5 (lower is better) Translates to: YCADFRLKYQLPRVKETGPSSNS*SDSSTT Trigger: GGTAGTAGATGAATCAGACAAACTGTTTGAAGATGG...GCCTGTTTCCTTTACTCTAGGCAGTTGATACTTTAGTCTAAAATCAGCACAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CCA 90 bp | AGAATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTaGGTCAGGAAGATCAGTTCCTTGGACATGTATCTTGTGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RIDFIFLVKLLKCSN*VRKISSLDMYLVLV Trigger: AACAAGCACAAGATACATGTCCAAGGAACTGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS-3UTR CAA 90 bp | GATTTTAGACTAAAGTATCAACTGCCTAGAGTAAAGGAAACAGGCTTAATTCAGACAAGAACAGGTGGCTaGAAACCCTTTTTAACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DFRLKYQLPRVKETGLIQTRTGG*KPFLTS Trigger: ACTTGTTAAAAAGGGTTTCAAGCCACCTGTTCTTGT...CTGAATTAAGCCTGTTTCCTTTACTCTAGGCAGTTGATACTTTAGTCTAAAATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS TCA 72 bp | TTTCCTTTTTCCTACCTGGAATCGAGTAGCGTCTGCTaGGAAGCGCTTCACGTCGAACTTGGCGCCGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FPFSYLESSSVC*EALHVELGAGS Trigger: GGAGCCGGCGCCAAGTTCGACGTGAAGCGCTTCTCAGCAGACGCTACTCGATTCCAGGTAGGAAAAAGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS TCA 72 bp | TCCCGACCATGCAGCATAACTGGAATGGCTTGCATCTaGATTGGTGTGGGCACTTGGAAGCCTGCGTCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SRPCSITGMACI*IGVGTWKPASR Trigger: TCTAGACGCAGGCTTCCAAGTGCCCACACCAATTCAGATGCAAGCCATTCCAGTTATGCTGCATGGTCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS GCA 72 bp | CTGTTCAACGTCGTACGCAAAAGTTGCGCTGAACATTaGTCTTCTGACCTTGGGCGATGTGCAGGCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LFNVVRKSCAEH*SSDLGRCAGQE Trigger: TTCCTGGCCTGCACATCGCCCAAGGTCAGAAGAGCAATGTTCAGCGCAACTTTTGCGTACGACGTTGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 72 bp | CCAATGGACACGGAAACGACGTTGTCCAGGTTGAGCTaGCACCACTGTTCAACGTCGTACGCAAAAGTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PMDTETTLSRLS*HHCSTSYAKVA Trigger: CGCAACTTTTGCGTACGACGTTGAACAGTGGTGCAAGCTCAACCTGGACAACGTCGTTTCCGTGTCCATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 72 bp | GCAGAATTCCTTGCTCCAATGGACACGGAAACGACGTaGTCCAGGTTGAGCTTGCACCACTGTTCAACGTCG | + |
|
Preference number: 6 (lower is better) Translates to: AEFLAPMDTETT*SRLSLHHCSTS Trigger: CGACGTTGAACAGTGGTGCAAGCTCAACCTGGACAACGTCGTTTCCGTGTCCATTGGAGCAAGGAATTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 90 bp | TCAACGTCGTACGCAAAAGTTGCGCTGAACATTGCTCTTCTGACCTaGGGCGATGTGCAGGCCAGGAAAATGGAAGCCAGCTGCTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: STSYAKVALNIALLT*GDVQARKMEASCSL Trigger: TAGAGAGCAGCTGGCTTCCATTTTCCTGGCCTGCACATCGCCCAAGGTCAGAAGAGCAATGTTCAGCGCAACTTTTGCGTACGACGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 90 bp | GCAGAATTCCTTGCTCCAATGGACACGGAAACGACGTTGTCCAGGTaGAGCTTGCACCACTGTTCAACGTCGTACGCAAAAGTTGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AEFLAPMDTETTLSR*SLHHCSTSYAKVAL Trigger: CAGCGCAACTTTTGCGTACGACGTTGAACAGTGGTGCAAGCTCAACCTGGACAACGTCGTTTCCGTGTCCATTGGAGCAAGGAATTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS TCA 72 bp | TTGCTCCAATGGACACGGAAACGACGTTGTCCAGGTTaGGCTTGCACCACTGTTCAACGTCGTACGCAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLQWTRKRRCPG*ACTTVQRRTQK Trigger: CTTTTGCGTACGACGTTGAACAGTGGTGCAAGCTCAACCTGGACAACGTCGTTTCCGTGTCCATTGGAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS GCA 72 bp | GAGCTTGCACCACTGTTCAACGTCGTACGCAAAAGTTaGGCTGAACATTGCTCTTCTGACCTTGGGCGATGT | + |
|
Preference number: 6 (lower is better) Translates to: ELAPLFNVVRKS*AEHCSSDLGRC Trigger: ACATCGCCCAAGGTCAGAAGAGCAATGTTCAGCGCAACTTTTGCGTACGACGTTGAACAGTGGTGCAAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 72 bp | CTTGCTCCAATGGACACGGAAACGACGTTGTCCAGGTaGAGCTTGCACCACTGTTCAACGTCGTACGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LAPMDTETTLSR*SLHHCSTSYAK Trigger: TTTTGCGTACGACGTTGAACAGTGGTGCAAGCTCAACCTGGACAACGTCGTTTCCGTGTCCATTGGAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 90 bp | TTCCTTGCTCCAATGGACACGGAAACGACGTTGTCCAGGTTGAGCTaGCACCACTGTTCAACGTCGTACGCAAAAGTTGCGCTGAACATT | + |
|
Preference number: 6 (lower is better) Translates to: FLAPMDTETTLSRLS*HHCSTSYAKVALNI Trigger: AATGTTCAGCGCAACTTTTGCGTACGACGTTGAACAGTGGTGCAAGCTCAACCTGGACAACGTCGTTTCCGTGTCCATTGGAGCAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 90 bp | GTTTCGACTGCAGAATTCCTTGCTCCAATGGACACGGAAACGACGTaGTCCAGGTTGAGCTTGCACCACTGTTCAACGTCGTACGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: VSTAEFLAPMDTETT*SRLSLHHCSTSYAK Trigger: TTTTGCGTACGACGTTGAACAGTGGTGCAAGCTCAACCTGGACAACGTCGTTTCCGTGTCCATTGGAGCAAGGAATTCTGCAGTCGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS GCA 72 bp | TTGGGCGATGTGCAGGCCAGGAAAATGGAAGCCAGCTaGTCTCTAAACCCAGTTTTGCCATCTTCAAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: LGDVQARKMEAS*SLNPVLPSSNS Trigger: ACTGTTTGAAGATGGCAAAACTGGGTTTAGAGAGCAGCTGGCTTCCATTTTCCTGGCCTGCACATCGCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 90 bp | TCCTGGTGTATTTGCAATGCTCCACATTCATCTGAGACGGACTTCTaGTTTCCGAAGAAGTCTAGTCCCTTCAGGACCTCCAAAGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: SWCICNAPHSSETDF*FPKKSSPFRTSKDS Trigger: CGAGTCTTTGGAGGTCCTGAAGGGACTAGACTTCTTCGGAAACAAGAAGTCCGTCTCAGATGAATGTGGAGCATTGCAAATACACCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 90 bp | GTGCAGGCCAGGAAAATGGAAGCCAGCTGCTCTCTAAACCCAGTTTaGCCATCTTCAAACAGTTTGTCTGATTCATCTACTACCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VQARKMEASCSLNPV*PSSNSLSDSSTTSH Trigger: GTGGCTGGTAGTAGATGAATCAGACAAACTGTTTGAAGATGGCAAAACTGGGTTTAGAGAGCAGCTGGCTTCCATTTTCCTGGCCTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS GCA 72 bp | TGTGTTTTCTCCTCATTTGGGGGCTCCTGGTGTATTTaGAATGCTCCACATTCATCTGAGACGGACTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CVFSSFGGSWCI*NAPHSSETDFL Trigger: CAAGAAGTCCGTCTCAGATGAATGTGGAGCATTGCAAATACACCAGGAGCCCCCAAATGAGGAGAAAACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 72 bp | ATTTGCAATGCTCCACATTCATCTGAGACGGACTTCTaGTTTCCGAAGAAGTCTAGTCCCTTCAGGACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ICNAPHSSETDF*FPKKSSPFRTS Trigger: GGAGGTCCTGAAGGGACTAGACTTCTTCGGAAACAAGAAGTCCGTCTCAGATGAATGTGGAGCATTGCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS GCA 72 bp | TCCAACAAAGAGAAGCTCTTGTTCAACAGTTTCGACTaGAGAATTCCTTGCTCCAATGGACACGGAAACGAC | + |
|
Preference number: 6 (lower is better) Translates to: SNKEKLLFNSFD*RIPCSNGHGND Trigger: GTCGTTTCCGTGTCCATTGGAGCAAGGAATTCTGCAGTCGAAACTGTTGAACAAGAGCTTCTCTTTGTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 72 bp | GTTTGTCTGATTCATCTACTACCAGCCACTCGACATTaGTTAGGTCAATCCCTGGTGGATCCTGCTTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: VCLIHLLPATRH*LGQSLVDPAST Trigger: TGTTGAAGCAGGATCCACCAGGGATTGACCTAACAAATGTCGAGTGGCTGGTAGTAGATGAATCAGACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 90 bp | GAAGCCAGCTGCTCTCTAAACCCAGTTTTGCCATCTTCAAACAGTTaGTCTGATTCATCTACTACCAGCCACTCGACATTTGTTAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EASCSLNPVLPSSNS*SDSSTTSHSTFVRS Trigger: TGACCTAACAAATGTCGAGTGGCTGGTAGTAGATGAATCAGACAAACTGTTTGAAGATGGCAAAACTGGGTTTAGAGAGCAGCTGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 90 bp | GCAATTGGGTCAGGAAGATCAGTTCCTTGGACATGTATCTTGTGCTaGTTCCGAAAGAAGTTGACCTTTTCCTTTCTGAGATGTTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: AIGSGRSVPWTCILC*FRKKLTFSFLRCSN Trigger: GTTGGAACATCTCAGAAAGGAAAAGGTCAACTTCTTTCGGAACAAGCACAAGATACATGTCCAAGGAACTGATCTTCCTGACCCAATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 90 bp | CTTCAAACAGTTTGTCTGATTCATCTACTACCAGCCACTCGACATTaGTTAGGTCAATCCCTGGTGGATCCTGCTTCAACAAGTAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: LQTVCLIHLLPATRH*LGQSLVDPASTSRS Trigger: TGATCTACTTGTTGAAGCAGGATCCACCAGGGATTGACCTAACAAATGTCGAGTGGCTGGTAGTAGATGAATCAGACAAACTGTTTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS GCA 72 bp | AAACCTTTTATGTATTCGGGCACAGGACAACCAGCCTaGTGGATAACATTGGCAACACTTCTTAGTAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: KPFMYSGTGQPA*WITLATLLSNG Trigger: ACCATTACTAAGAAGTGTTGCCAATGTTATCCAGCAGGCTGGTTGTCCTGTGCCCGAATACATAAAAGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 72 bp | AAGTTTTCCAGTCTCAGATCCAACAAAGAGAAGCTCTaGTTCAACAGTTTCGACTGCAGAATTCCTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KFSSLRSNKEKL*FNSFDCRIPCS Trigger: GGAGCAAGGAATTCTGCAGTCGAAACTGTTGAACAAGAGCTTCTCTTTGTTGGATCTGAGACTGGAAAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 90 bp | GTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCAGTTCCTaGGACATGTATCTTGTGCTTGTTCCGAAAGAAGTTGACCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VKLLKCSNWVRKISS*DMYLVLVPKEVDLF Trigger: GAAAAGGTCAACTTCTTTCGGAACAAGCACAAGATACATGTCCAAGGAACTGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 72 bp | TCAGGAAGATCAGTTCCTTGGACATGTATCTTGTGCTaGTTCCGAAAGAAGTTGACCTTTTCCTTTCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGRSVPWTCILC*FRKKLTFSFLR Trigger: TCTCAGAAAGGAAAAGGTCAACTTCTTTCGGAACAAGCACAAGATACATGTCCAAGGAACTGATCTTCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 72 bp | CTGAAATGTAGCAATTGGGTCAGGAAGATCAGTTCCTaGGACATGTATCTTGTGCTTGTTCCGAAAGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LKCSNWVRKISS*DMYLVLVPKEV Trigger: AACTTCTTTCGGAACAAGCACAAGATACATGTCCAAGGAACTGATCTTCCTGACCCAATTGCTACATTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CAA 72 bp | AGGAAAATGGAAGCCAGCTGCTCTCTAAACCCAGTTTaGCCATCTTCAAACAGTTTGTCTGATTCATCTACT | + |
|
Preference number: 6 (lower is better) Translates to: RKMEASCSLNPV*PSSNSLSDSST Trigger: AGTAGATGAATCAGACAAACTGTTTGAAGATGGCAAAACTGGGTTTAGAGAGCAGCTGGCTTCCATTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS GCA 72 bp | GTGGACTGTGTTATCTCGCTGCTGCTGTGTTCTTTCTaGATGAATGACATCCACATTAATACCTTCATATAT | + |
|
Preference number: 6 (lower is better) Translates to: VDCVISLLLCSF*MNDIHINTFIY Trigger: ATATATGAAGGTATTAATGTGGATGTCATTCATGCAGAAAGAACACAGCAGCAGCGAGATAACACAGTCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS CCA 72 bp | TTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTaGGTCAGGAAGATCAGTTCCTTGGACATGTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: FIFLVKLLKCSN*VRKISSLDMYL Trigger: AAGATACATGTCCAAGGAACTGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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| CDS TCA 72 bp | AATCTAGAATTGATTTTATATTCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCAGGAAGATCAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NLELILYSWSSC*NVAIGSGRSVP Trigger: AGGAACTGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAATTCTAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049257.8 |
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