Pregenerated sensors for DDX51 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029504Ensembl transcript IDs: ENSMUST00000031478.6, ENSMUST00000148773.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTATCTTCAAGGCTGCTGCCAACCTGTTCTTGGGCTCCAGTGACTTaGCTGGGGCAGGCTCGCCATAGCTTCTCTGTAGACAGGAGACGC | + |
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Preference number: 1 (lower is better) Translates to: VSSRLLPTCSWAPVT*LGQARHSFSVDRRR Trigger: GCGTCTCCTGTCTACAGAGAAGCTATGGCGAGCCTGCCCCAGGCAAGTCACTGGAGCCCAAGAACAGGTTGGCAGCAGCCTTGAAGATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR CCA 90 bp | AGACGACCAGATGCCCACGGCACTGGGGAGAAGGGTTGTTTCCACTaGAACCCCAAGGAACTTATCTTCTGTTCGCACGATCTTCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: RRPDAHGTGEKGCFH*NPKELIFCSHDLPS Trigger: GGAGGGAAGATCGTGCGAACAGAAGATAAGTTCCTTGGGGTTCCAGTGGAAACAACCCTTCTCCCCAGTGCCGTGGGCATCTGGTCGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031478.6 ENSMUST00000148773.2 |
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| 3UTR TCA 90 bp | TTGGCAGACAGTGTTTGGGAGATCTCTGGGTGTAGGGGAAGGGTCTaGTCCTGTGAGAAAGAAAGTGATGCTAGCTTGGGTCTAGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: LADSVWEISGCRGRV*SCEKESDASLGLGQ Trigger: TTGCCCTAGACCCAAGCTAGCATCACTTTCTTTCTCACAGGATCAGACCCTTCCCCTACACCCAGAGATCTCCCAAACACTGTCTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR CCA 90 bp | GAAGGCATCCTTCAGCTTCACCTGAGCTTATTTCCCAAGACCAACTaGACACCAGCAGTCCAACCCGAGAGCCATTACTTTTCAGGACGA | + |
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Preference number: 1 (lower is better) Translates to: EGILQLHLSLFPKTN*TPAVQPESHYFSGR Trigger: TCGTCCTGAAAAGTAATGGCTCTCGGGTTGGACTGCTGGTGTCCAGTTGGTCTTGGGAAATAAGCTCAGGTGAAGCTGAAGGATGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031478.6 ENSMUST00000148773.2 |
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| 3UTR TCA 90 bp | AGGGCCCTGTTCTCATCTAGGCTGCCTTCAGTTTCTGCTCCTCCTTaGCAGTTTTCTCCAACTGAGACAAGGCTGTCTCATAACGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: RALFSSRLPSVSAPP*QFSPTETRLSHNEQ Trigger: TTGCTCGTTATGAGACAGCCTTGTCTCAGTTGGAGAAAACTGTCAAGGAGGAGCAGAAACTGAAGGCAGCCTAGATGAGAACAGGGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148773.2 |
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| 3UTR GCA 90 bp | ACAATGATGGGCTGGAGAGATGGCTCAACAGTTAAGAACACTGGCTaGTTTTCCAAAGGACCCAGGTTCAATTCCCAGCACCTAAATGGT | + |
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Preference number: 1 (lower is better) Translates to: TMMGWRDGSTVKNTG*FSKGPRFNSQHLNG Trigger: ACCATTTAGGTGCTGGGAATTGAACCTGGGTCCTTTGGAAAAGCAGCCAGTGTTCTTAACTGTTGAGCCATCTCTCCAGCCCATCATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR GCA 90 bp | CTACCTGGCAGGGTTAATGTTGACATGAGCCCACGTTTGTTTCGGTaGTTCTGTGGAAACTATTCCCCCAGTTTTAACCTCTTCTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: LPGRVNVDMSPRLFR*FCGNYSPSFNLFCK Trigger: TTTGCAGAAGAGGTTAAAACTGGGGGAATAGTTTCCACAGAAGCACCGAAACAAACGTGGGCTCATGTCAACATTAACCCTGCCAGGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR CCA 90 bp | ACAACTGCCTGTAGTTCCAGTTCTAGGGGATCCAACAAACACTTCTaGCTTCCTTGGGCACTAGGCATATATGCTATACAGACATACATG | + |
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Preference number: 1 (lower is better) Translates to: TTACSSSSRGSNKHF*LPWALGIYAIQTYM Trigger: CATGTATGTCTGTATAGCATATATGCCTAGTGCCCAAGGAAGCCAGAAGTGTTTGTTGGATCCCCTAGAACTGGAACTACAGGCAGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR TCA 90 bp | GCACAAGACCTGTATAAGCTGAGGAACTACTGTTATTACTGCTACTaGAAGAGGGACTCAGTTTTCTTTGGTAGTGTGACCCCTAGTAGG | + |
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Preference number: 1 (lower is better) Translates to: AQDLYKLRNYCYYCY*KRDSVFFGSVTPSR Trigger: CCTACTAGGGGTCACACTACCAAAGAAAACTGAGTCCCTCTTTCAGTAGCAGTAATAACAGTAGTTCCTCAGCTTATACAGGTCTTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR CCA 90 bp | TGTAGTTCCAGTTCTAGGGGATCCAACAAACACTTCTGGCTTCCTTaGGCACTAGGCATATATGCTATACAGACATACATGCAGGTAAAC | + |
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Preference number: 1 (lower is better) Translates to: CSSSSRGSNKHFWLP*ALGIYAIQTYMQVN Trigger: GTTTACCTGCATGTATGTCTGTATAGCATATATGCCTAGTGCCCAAGGAAGCCAGAAGTGTTTGTTGGATCCCCTAGAACTGGAACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR CCA 90 bp | GTATTTACCCATAAAGGCTGTGATTTAAGGGACACAATGATGGGCTaGAGAGATGGCTCAACAGTTAAGAACACTGGCTGCTTTTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: VFTHKGCDLRDTMMG*RDGSTVKNTGCFSK Trigger: TTTGGAAAAGCAGCCAGTGTTCTTAACTGTTGAGCCATCTCTCCAGCCCATCATTGTGTCCCTTAAATCACAGCCTTTATGGGTAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR TCA 90 bp | TCAAGACACAATAGAGCAGTAAGGCATATGAACTCACAGAGACTGTaGTGGCATGCACAAGACCTGTATAAGCTGAGGAACTACTGTTAT | + |
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Preference number: 1 (lower is better) Translates to: SRHNRAVRHMNSQRL*WHAQDLYKLRNYCY Trigger: ATAACAGTAGTTCCTCAGCTTATACAGGTCTTGTGCATGCCATCACAGTCTCTGTGAGTTCATATGCCTTACTGCTCTATTGTGTCTTGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR-3UTR GCA 90 bp | CATCAACCAAGACGACCAGATGCCCACGGCACTGGGGAGAAGGGTTGTTTCCACTGTTCTCATCTAGGCTaGCTTCAGTTTCTGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: HQPRRPDAHGTGEKGCFHCSHLG*LQFLLL Trigger: GAGGAGCAGAAACTGAAGGCAGCCTAGATGAGAACA...GTGGAAACAACCCTTCTCCCCAGTGCCGTGGGCATCTGGTCGTCTTGGTTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148773.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTAGGAGTGAAGGTGGCACAGGCCTTTAATCTCAGCATTCAAGAGGCAGAGGGGCAATGCATGTTCTaGAAGGTCACAGAAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: WLGVKVAQAFNLSIQEAEGQCMF*KVTEEA Trigger: TGCCTCTTCTGTGACCTTTCAGAACATGCATTGCCC...CTCTGCCTCTTGAATGCTGAGATTAAAGGCCTGTGCCACCTTCACTCCTAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR-3UTR GCA 90 bp | AGGATCCAGCTTACAACTGCCTGTAGTTCCAGTTCTAGGGGATCCAACAAACACTATCTTCAAGGCTGCTaGCAACCTGTTCTTGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: RIQLTTACSSSSRGSNKHYLQGC*QPVLGL Trigger: GAGCCCAAGAACAGGTTGGCAGCAGCCTTGAAGATA...GTGTTTGTTGGATCCCCTAGAACTGGAACTACAGGCAGTTGTAAGCTGGATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR-3UTR GCA 90 bp | AGTCCAGTCACCATAGTGTTTGCTCACACTCCAGAAGGCATCCTTCAGCTTCACGCTGCCTTCAGTTTCTaGTCCTCCTTGACAGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: SPVTIVFAHTPEGILQLHAAFSF*SSLTVF Trigger: GAAAACTGTCAAGGAGGAGCAGAAACTGAAGGCAGC...GTGAAGCTGAAGGATGCCTTCTGGAGTGTGAGCAAACACTATGGTGACTGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148773.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTAGGAGTGAAGGTGGCACAGGCCTTTAATCTCAGCATTCAAGAGGCAGAGGATTTAAAAAGGACTTaGACAGGGACACAGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: WLGVKVAQAFNLSIQEAEDLKRT*TGTQRW Trigger: CCATCTCTGTGTCCCTGTCCAAGTCCTTTTTAAATC...CTCTGCCTCTTGAATGCTGAGATTAAAGGCCTGTGCCACCTTCACTCCTAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR-3UTR CCA 90 bp | TCTGACCTTCAGACCAGACTTCTCATCAGCAAGATCTTTCAGTTTTGGTCTGTGAATTCCACAGAGCTATaGTCCAGGGCAGAGAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: SDLQTRLLISKIFQFWSVNSTEL*SRAEKA Trigger: AGCTTTCTCTGCCCTGGACCATAGCTCTGTGGAATT...CACAGACCAAAACTGAAAGATCTTGCTGATGAGAAGTCTGGTCTGAAGGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR-3UTR CCA 90 bp | CTCATCAGCAAGATCTTTCAGTTTTGGTCTGTGAAAATCCTAGCTCTAATAACTGTTTCGGTGCTTCTGTaGAAACTATTCCCCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LISKIFQFWSVKILALITVSVLL*KLFPQF Trigger: AAACTGGGGGAATAGTTTCCACAGAAGCACCGAAAC...AGTTATTAGAGCTAGGATTTTCACAGACCAAAACTGAAAGATCTTGCTGATGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR CCA 72 bp | GCTGCATCAACCAAGACGACCAGATGCCCACGGCACTaGGGAGAAGGGTTGTTTCCACTGGAACCCCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: AASTKTTRCPRH*GEGLFPLEPQG Trigger: TCCTTGGGGTTCCAGTGGAAACAACCCTTCTCCCCAGTGCCGTGGGCATCTGGTCGTCTTGGTTGATGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031478.6 ENSMUST00000148773.2 |
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| 3UTR CCA 72 bp | AAGGAAGTATCTTCAAGGCTGCTGCCAACCTGTTCTTaGGCTCCAGTGACTTGCCTGGGGCAGGCTCGCCAT | + |
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Preference number: 3 (lower is better) Translates to: KEVSSRLLPTCS*APVTCLGQARH Trigger: ATGGCGAGCCTGCCCCAGGCAAGTCACTGGAGCCCAAGAACAGGTTGGCAGCAGCCTTGAAGATACTTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR GCA 72 bp | ACGATCTTCCCTCCAGGGCCCTGTTCTCATCTAGGCTaGCTTCAGTTTCTGCTCCTCCTTGACAGTTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: TIFPPGPCSHLG*LQFLLLLDSFL Trigger: GAGAAAACTGTCAAGGAGGAGCAGAAACTGAAGGCAGCCTAGATGAGAACAGGGCCCTGGAGGGAAGATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148773.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTTTCCACTGGAACCCCAAGGAACTTATCTTCTGTTCGCACGATCTTCCCTCCACTGGGGAGAAGGGTaGTTTCCACTGGAACCCCAA | + |
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Preference number: 3 (lower is better) Translates to: LFPLEPQGTYLLFARSSLHWGEG*FPLEPQ Trigger: TTGGGGTTCCAGTGGAAACAACCCTTCTCCCCAGTG...GAGGGAAGATCGTGCGAACAGAAGATAAGTTCCTTGGGGTTCCAGTGGAAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031478.6 ENSMUST00000148773.2 |
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| 3UTR TCA 72 bp | TTGCTCACACTCCAGAAGGCATCCTTCAGCTTCACCTaGGCTTATTTCCCAAGACCAACTGGACACCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LLTLQKASFSFT*AYFPRPTGHQQ Trigger: CTGCTGGTGTCCAGTTGGTCTTGGGAAATAAGCTCAGGTGAAGCTGAAGGATGCCTTCTGGAGTGTGAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031478.6 ENSMUST00000148773.2 |
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| 3UTR GCA 72 bp | GGCTGGAGAGATGGCTCAACAGTTAAGAACACTGGCTaGTTTTCCAAAGGACCCAGGTTCAATTCCCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: GWRDGSTVKNTG*FSKGPRFNSQH Trigger: GTGCTGGGAATTGAACCTGGGTCCTTTGGAAAAGCAGCCAGTGTTCTTAACTGTTGAGCCATCTCTCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR TCA 72 bp | AGTGTTTGGGAGATCTCTGGGTGTAGGGGAAGGGTCTaGTCCTGTGAGAAAGAAAGTGATGCTAGCTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: SVWEISGCRGRV*SCEKESDASLG Trigger: ACCCAAGCTAGCATCACTTTCTTTCTCACAGGATCAGACCCTTCCCCTACACCCAGAGATCTCCCAAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR TCA 72 bp | CAACAAGTCCAGAGTGAGAGTGTGTGTGTGGAGTGTTaGCCTCTAAGTGGAACATTTCACACCTCTCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: QQVQSESVCVEC*PLSGTFHTSLS Trigger: GGACAGAGAGGTGTGAAATGTTCCACTTAGAGGTCAACACTCCACACACACACTCTCACTCTGGACTTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR TCA 72 bp | AAGCTTTCAGATGACAGCTGCTCAACAAGTCCAGAGTaGGAGTGTGTGTGTGGAGTGTTGACCTCTAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: KLSDDSCSTSPE*ECVCGVLTSKW Trigger: CCACTTAGAGGTCAACACTCCACACACACACTCTCACTCTGGACTTGTTGAGCAGCTGTCATCTGAAAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR CCA 72 bp | CATAAAGGCTGTGATTTAAGGGACACAATGATGGGCTaGAGAGATGGCTCAACAGTTAAGAACACTGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: HKGCDLRDTMMG*RDGSTVKNTGC Trigger: GCAGCCAGTGTTCTTAACTGTTGAGCCATCTCTCCAGCCCATCATTGTGTCCCTTAAATCACAGCCTTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR-3UTR CAA 90 bp | AAACAAGCTTTGGAAAAACATTTCCTGGGCCCAACACACATGAACCAAACCTCAGAAAGTGATGCTAGCTaGGGTCTAGGGCAATGCATG | + |
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Preference number: 3 (lower is better) Translates to: KQALEKHFLGPTHMNQTSESDAS*GLGQCM Trigger: CATGCATTGCCCTAGACCCAAGCTAGCATCACTTTC...TGAGGTTTGGTTCATGTGTGTTGGGCCCAGGAAATGTTTTTCCAAAGCTTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR TCA 72 bp | GGTGTACTGCCAACTTTCATCAGAAAAGCTTTCAGATaGCAGCTGCTCAACAAGTCCAGAGTGAGAGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GVLPTFIRKAFR*QLLNKSRVRVC Trigger: ACACACTCTCACTCTGGACTTGTTGAGCAGCTGTCATCTGAAAGCTTTTCTGATGAAAGTTGGCAGTACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR GCA 72 bp | AGGGTTAATGTTGACATGAGCCCACGTTTGTTTCGGTaGTTCTGTGGAAACTATTCCCCCAGTTTTAACCTC | + |
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Preference number: 3 (lower is better) Translates to: RVNVDMSPRLFR*FCGNYSPSFNL Trigger: GAGGTTAAAACTGGGGGAATAGTTTCCACAGAAGCACCGAAACAAACGTGGGCTCATGTCAACATTAACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR CCA 72 bp | AGTTCTAGGGGATCCAACAAACACTTCTGGCTTCCTTaGGCACTAGGCATATATGCTATACAGACATACATG | + |
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Preference number: 3 (lower is better) Translates to: SSRGSNKHFWLP*ALGIYAIQTYM Trigger: CATGTATGTCTGTATAGCATATATGCCTAGTGCCCAAGGAAGCCAGAAGTGTTTGTTGGATCCCCTAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR TCA 72 bp | AAGCTTTGGAAAAACATTTCCTGGGCCCAACACACATaGACCAAACCTCATAACTGCAATCCTCATGCACTT | + |
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Preference number: 3 (lower is better) Translates to: KLWKNISWAQHT*TKPHNCNPHAL Trigger: AAGTGCATGAGGATTGCAGTTATGAGGTTTGGTTCATGTGTGTTGGGCCCAGGAAATGTTTTTCCAAAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR CCA 72 bp | CTAGCTCTAATAACTCACATTAAAACCATCTGTATCTaGCTAGGAGTGAAGGTGGCACAGGCCTTTAATCTC | + |
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Preference number: 3 (lower is better) Translates to: LALITHIKTICI*LGVKVAQAFNL Trigger: GAGATTAAAGGCCTGTGCCACCTTCACTCCTAGCCAGATACAGATGGTTTTAATGTGAGTTATTAGAGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR TCA 72 bp | CTGTATAAGCTGAGGAACTACTGTTATTACTGCTACTaGAAGAGGGACTCAGTTTTCTTTGGTAGTGTGACC | + |
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Preference number: 3 (lower is better) Translates to: LYKLRNYCYYCY*KRDSVFFGSVT Trigger: GGTCACACTACCAAAGAAAACTGAGTCCCTCTTTCAGTAGCAGTAATAACAGTAGTTCCTCAGCTTATACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR GCA 72 bp | CAAACACTTCTGGCTTCCTTGGGCACTAGGCATATATaGTATACAGACATACATGCAGGTAAACACTCATAT | + |
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Preference number: 3 (lower is better) Translates to: QTLLASLGTRHI*YTDIHAGKHSY Trigger: ATATGAGTGTTTACCTGCATGTATGTCTGTATAGCATATATGCCTAGTGCCCAAGGAAGCCAGAAGTGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR TCA 72 bp | GCCTTCTTAAAAGCACAGGTAAGCGCTAATTCTCCTTaGCTATATATATTCAGGGAAGGACTCTCACATCAT | + |
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Preference number: 3 (lower is better) Translates to: AFLKAQVSANSP*LYIFREGLSHH Trigger: ATGATGTGAGAGTCCTTCCCTGAATATATATAGTCAAGGAGAATTAGCGCTTACCTGTGCTTTTAAGAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR CCA 72 bp | CAGACCAGACTTCTCATCAGCAAGATCTTTCAGTTTTaGTCTGTGAAAATCCTAGCTCTAATAACTCACATT | + |
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Preference number: 3 (lower is better) Translates to: QTRLLISKIFQF*SVKILALITHI Trigger: AATGTGAGTTATTAGAGCTAGGATTTTCACAGACCAAAACTGAAAGATCTTGCTGATGAGAAGTCTGGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR TCA 72 bp | ATTAGTAACACAATGTTGATTACTCAAAAGGAAGTCTaGCCTTCAGACCAGACTTCTCATCAGCAAGATCTT | + |
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Preference number: 3 (lower is better) Translates to: ISNTMLITQKEV*PSDQTSHQQDL Trigger: AAGATCTTGCTGATGAGAAGTCTGGTCTGAAGGTCAGACTTCCTTTTGAGTAATCAACATTGTGTTACTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| 3UTR-3UTR CAA 90 bp | CTCATCAGCAAGATCTTTCAGTTTTGGTCTGTGAAAATCCTAGCTCTAATAACTGCTCTACCTAAGATTTaGTTAGAAAACAGGCATTTC | + |
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Preference number: 3 (lower is better) Translates to: LISKIFQFWSVKILALITALPKI*LENRHF Trigger: GAAATGCCTGTTTTCTAACAAAATCTTAGGTAGAGC...AGTTATTAGAGCTAGGATTTTCACAGACCAAAACTGAAAGATCTTGCTGATGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR CCA 90 bp | CTGCATCAACCAAGACGACCAGATGCCCACGGCACTGGGGAGAAGGGTTGTTTCGGGGGACACAGGTGCTaGCAGCAGTCAGAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LHQPRRPDAHGTGEKGCFGGHRC*QQSEPG Trigger: CCCAGGCTCTGACTGCTGCCAGCACCTGTGTCCCCC...GAAACAACCCTTCTCCCCAGTGCCGTGGGCATCTGGTCGTCTTGGTTGATGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR GCA 90 bp | GCTGGAGAGATGGCTCAACAGTTAAGAACACTGGCTGCTTTTCCAAAGGACCCACCGGCTGCCCGCCTCTaGGTCCGTATCCCCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: AGEMAQQLRTLAAFPKDPPAARL*VRIPLP Trigger: GGGCAGGGGGATACGGACGCAGAGGCGGGCAGCCGG...TGGGTCCTTTGGAAAAGCAGCCAGTGTTCTTAACTGTTGAGCCATCTCTCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR GCA 90 bp | GGCACTGGGGAGAAGGGTTGTTTCCACTGGAACCCCAAGGAACTTATCTTCTGTCCGCTTGCCTGCTGCTaGCGCTTCCCCTTCCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: GTGEKGCFHWNPKELIFCPLACC*RFPFPG Trigger: GCCGGGGAAGGGGAAGCGGCAGCAGCAGGCAAGCGG...ACAGAAGATAAGTTCCTTGGGGTTCCAGTGGAAACAACCCTTCTCCCCAGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR GCA 90 bp | AGGGTTGTTTCCACTGGAACCCCAAGGAACTTATCTTCTGTTCGCACGATCTTCGCCGCCGTCGCCGCTTaGCTGCTGCTGCCGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RVVSTGTPRNLSSVRTIFAAVAA*LLLPLP Trigger: GGGAAGCGGCAGCAGCAGGCAAGCGGCGACGGCGGC...GAAGATCGTGCGAACAGAAGATAAGTTCCTTGGGGTTCCAGTGGAAACAACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR GCA 90 bp | CTGCATCAACCAAGACGACCAGATGCCCACGGCACTGGGGAGAAGGGTTGTTTCCGGCGTCTTTCTTCTTaGAAAGTCCCCCAGCACCCG | + |
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Preference number: 4 (lower is better) Translates to: LHQPRRPDAHGTGEKGCFRRLSS*KVPQHP Trigger: CGGGTGCTGGGGGACTTTGCAAGAAGAAAGACGCCG...GAAACAACCCTTCTCCCCAGTGCCGTGGGCATCTGGTCGTCTTGGTTGATGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR TCA 90 bp | CTGCATCAACCAAGACGACCAGATGCCCACGGCACTGGGGAGAAGGGTTGTTTCTTCTGCAGGTCAGGGTaGACCTCAGGGATGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LHQPRRPDAHGTGEKGCFFCRSG*TSGMSS Trigger: TGAGGACATCCCTGAGGTTCACCCTGACCTGCAGAA...GAAACAACCCTTCTCCCCAGTGCCGTGGGCATCTGGTCGTCTTGGTTGATGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR GCA 90 bp | ACCAAGACGACCAGATGCCCACGGCACTGGGGAGAAGGGTTGTTTCCACTGGAAGGCGGGAATCACAGCTaGCTGGACTGGAAAGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKTTRCPRHWGEGLFPLEGGNHS*LDWKVG Trigger: TCCTACTTTCCAGTCCAGGCAGCTGTGATTCCCGCC...TTCCAGTGGAAACAACCCTTCTCCCCAGTGCCGTGGGCATCTGGTCGTCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | AGTAGCCAAGGAAGTATCTTCAAGGCTGCTGCCAACCTGTTCTTGGGCTCCAGTTGGGGCTGTGTCCTCTaGAGCAGGGCACAGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SSQGSIFKAAANLFLGSSWGCVL*SRAQEP Trigger: GGGTTCCTGTGCCCTGCTCCAGAGGACACAGCCCCA...ACTGGAGCCCAAGAACAGGTTGGCAGCAGCCTTGAAGATACTTCCTTGGCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR GCA 90 bp | AGGCATCCTTCAGCTTCACCTGAGCTTATTTCCCAAGACCAACTGGACACCAGCCCAGTGTTTTCCCACTaGCCGTTGGGGCAGAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: RHPSASPELISQDQLDTSPVFSH*PLGQRR Trigger: GCGTCTCTGCCCCAACGGGCAGTGGGAAAACACTGG...GCTGGTGTCCAGTTGGTCTTGGGAAATAAGCTCAGGTGAAGCTGAAGGATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR GCA 90 bp | CTGGAACCCCAAGGAACTTATCTTCTGTTCGCACGATCTTCCCTCCAGGGCCCTACCAGCTCCACACCCTaGACATCAATGCCTCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEPQGTYLLFARSSLQGPTSSTP*TSMPRA Trigger: TGCTCGAGGCATTGATGTGCAGGGTGTGGAGCTGGT...AGGGCCCTGGAGGGAAGATCGTGCGAACAGAAGATAAGTTCCTTGGGGTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGAGATGGCTCAACAGTTAAGAACACTGGCTGCTTTTCCAAAGGACCCACGAGCAACCAGCGGCTaGAGGAGCTTCCTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: AGEMAQQLRTLAAFPKDPRATSG*RSFLGI Trigger: GATCCCCAGGAAGCTCCTGCAGCCGCTGGTTGCTCG...TGGGTCCTTTGGAAAAGCAGCCAGTGTTCTTAACTGTTGAGCCATCTCTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | CAGTCCAGTCACCATAGTGTTTGCTCACACTCCAGAAGGCATCCTTCAGCTTCATGCCGCCACCACTCGTaGCAGCCAGGACTGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSSHHSVCSHSRRHPSASCRHHS*QPGLVH Trigger: ATGCACCAGTCCTGGCTGCCACGAGTGGTGGCGGCA...TGAAGCTGAAGGATGCCTTCTGGAGTGTGAGCAAACACTATGGTGACTGGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR TCA 90 bp | TTCTGTTCGCACGATCTTCCCTCCAGGGCCCTGTTCTCATCTAGGCTGCCTTCAAGGCACCCCAGCTTCTaGCACCATCTGAAGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FCSHDLPSRALFSSRLPSRHPSF*HHLKEL Trigger: AAGTTCCTTCAGATGGTGTCAGAAGCTGGGGTGCCT...TGAAGGCAGCCTAGATGAGAACAGGGCCCTGGAGGGAAGATCGTGCGAACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148773.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCAGTCACCATAGTGTTTGCTCACACTCCAGAAGGCATCCTTCAGCTTCACTTTCCCACTGCCCGTTaGGGCAGAGACGCAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPVTIVFAHTPEGILQLHFPTAR*GRDAEV Trigger: GACCTCTGCGTCTCTGCCCCAACGGGCAGTGGGAAA...GTGAAGCTGAAGGATGCCTTCTGGAGTGTGAGCAAACACTATGGTGACTGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | ACCAAGACGACCAGATGCCCACGGCACTGGGGAGAAGGGTTGTTTCCACTGGAACTGAATCCTGGAGTCTaGTCAATGTGGTCCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKTTRCPRHWGEGLFPLELNPGV*SMWSTK Trigger: CTTGGTGGACCACATTGACCAGACTCCAGGATTCAG...TTCCAGTGGAAACAACCCTTCTCCCCAGTGCCGTGGGCATCTGGTCGTCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | AGGCATCCTTCAGCTTCACCTGAGCTTATTTCCCAAGACCAACTGGACACCAGCAGGAAGCGGAGCTGCTaGAGGCTGAATCCTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RHPSASPELISQDQLDTSRKRSC*RLNPGV Trigger: GACTCCAGGATTCAGCCTCCAGCAGCTCCGCTTCCT...GCTGGTGTCCAGTTGGTCTTGGGAAATAAGCTCAGGTGAAGCTGAAGGATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | AGGCATCCTTCAGCTTCACCTGAGCTTATTTCCCAAGACCAACTGGACACCAGCTGTGGAGAAAAGCCGTaGCTGGTAGAGGCCAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RHPSASPELISQDQLDTSCGEKP*LVEAKA Trigger: CGCCTTGGCCTCTACCAGCCACGGCTTTTCTCCACA...GCTGGTGTCCAGTTGGTCTTGGGAAATAAGCTCAGGTGAAGCTGAAGGATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| 3UTR CAA 72 bp | AAGACGACCAGATGCCCACGGCACTGGGGAGAAGGGTaGTTTCCACTGGAACCCCAAGGAACTTATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTTRCPRHWGEG*FPLEPQGTYLL Trigger: CAGAAGATAAGTTCCTTGGGGTTCCAGTGGAAACAACCCTTCTCCCCAGTGCCGTGGGCATCTGGTCGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031478.6 ENSMUST00000148773.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATCCTTCAGCTTCACCTGAGCTTATTTCCCAAGACCAACTGGACACCAGCAGCCACCTCTGCCTATaGGAAACCCATGGTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHPSASPELISQDQLDTSSHLCL*ETHGQH Trigger: GTGCTGACCATGGGTTTCTCATAGGCAGAGGTGGCT...GCTGGTGTCCAGTTGGTCTTGGGAAATAAGCTCAGGTGAAGCTGAAGGATGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR GCA 90 bp | AGTAGCCAAGGAAGTATCTTCAAGGCTGCTGCCAACCTGTTCTTGGGCTCCAGTGGGAAGTACAACCAGTaGACGGATGTGGCAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSQGSIFKAAANLFLGSSGKYNQ*TDVADH Trigger: GTGGTCTGCCACATCCGTGCACTGGTTGTACTTCCC...ACTGGAGCCCAAGAACAGGTTGGCAGCAGCCTTGAAGATACTTCCTTGGCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR GCA 90 bp | CTACAGAGCAAGTTCCAGAACAGCCAGGCTATGCAGAGAACCCTGCTCAGTAAAGGCAGCCAGGACTGGTaGATGCTGTCTATCATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSKFQNSQAMQRTLLSKGSQDW*MLSIIR Trigger: CCGGATGATAGACAGCATGCACCAGTCCTGGCTGCC...TTTACTGAGCAGGGTTCTCTGCATAGCCTGGCTGTTCTGGAACTTGCTCTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR GCA 90 bp | AGGGTTGTTTCCACTGGAACCCCAAGGAACTTATCTTCTGTTCGCACGATCTTCTCTGGGGGACACAGGTaGTGGCAGCAGTCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVVSTGTPRNLSSVRTIFSGGHR*WQQSEP Trigger: AGGCTCTGACTGCTGCCAGCACCTGTGTCCCCCAGA...GAAGATCGTGCGAACAGAAGATAAGTTCCTTGGGGTTCCAGTGGAAACAACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGAGATGGCTCAACAGTTAAGAACACTGGCTGCTTTTCCAAAGGACCCAGGAGTCTGGTCAATGTaGTCCACCAAGCGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGEMAQQLRTLAAFPKDPGVWSM*STKRPG Trigger: ACCTGGCCGCTTGGTGGACCACATTGACCAGACTCC...TGGGTCCTTTGGAAAAGCAGCCAGTGTTCTTAACTGTTGAGCCATCTCTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | AGTTCCAGTTCTAGGGGATCCAACAAACACTTCTGGCTTCCTTGGGCACTAGGCCGTGGCAGCCAGGACTaGTGCATGCTGTCTATCATC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSRGSNKHFWLPWALGRGSQD*CMLSII Trigger: GATGATAGACAGCATGCACCAGTCCTGGCTGCCACG...GCCTAGTGCCCAAGGAAGCCAGAAGTGTTTGTTGGATCCCCTAGAACTGGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR TCA 90 bp | CAGTCCAGTCACCATAGTGTTTGCTCACACTCCAGAAGGCATCCTTCAGCTTCACCTGTACCACGGGGATaGCAAAGGCCAGTGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSSHHSVCSHSRRHPSASPVPRG*QRPVFS Trigger: GGAAAACACTGGCCTTTGTCATCCCCGTGGTACAGG...TGAAGCTGAAGGATGCCTTCTGGAGTGTGAGCAAACACTATGGTGACTGGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR TCA 90 bp | AGGATCCAGCTTACAACTGCCTGTAGTTCCAGTTCTAGGGGATCCAACAAACACGTGGGGCATCGTAGTTaGTCACCAGCTCCACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIQLTTACSSSSRGSNKHVGHRS*SPAPHP Trigger: AGGGTGTGGAGCTGGTGATCAACTACGATGCCCCAC...GTGTTTGTTGGATCCCCTAGAACTGGAACTACAGGCAGTTGTAAGCTGGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | CTACAGAGCAAGTTCCAGAACAGCCAGGCTATGCAGAGAACCCTGCTCAGTAAAACCAGTGCACGGATGTaGCAGACCACTCGATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSKFQNSQAMQRTLLSKTSARM*QTTRCN Trigger: GTTGCATCGAGTGGTCTGCCACATCCGTGCACTGGT...TTTACTGAGCAGGGTTCTCTGCATAGCCTGGCTGTTCTGGAACTTGCTCTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | CTGGAACCCCAAGGAACTTATCTTCTGTTCGCACGATCTTCCCTCCAGGGCCCTAATAGGTACAGCCTGTaGGAGTTTTCTCGGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEPQGTYLLFARSSLQGPNRYSL*EFSREL Trigger: CAACTCCCGAGAAAACTCCCACAGGCTGTACCTATT...AGGGCCCTGGAGGGAAGATCGTGCGAACAGAAGATAAGTTCCTTGGGGTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR TCA 90 bp | CAGTCCAGTCACCATAGTGTTTGCTCACACTCCAGAAGGCATCCTTCAGCTTCAAGGCACCCCAGCTTCTaGCACCATCTGAAGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QSSHHSVCSHSRRHPSASRHPSF*HHLKEL Trigger: AAGTTCCTTCAGATGGTGTCAGAAGCTGGGGTGCCT...TGAAGCTGAAGGATGCCTTCTGGAGTGTGAGCAAACACTATGGTGACTGGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031478.6 ENSMUST00000148773.2 |
||
| CDS-3UTR TCA 90 bp | CTTATCTTCTGTTCGCACGATCTTCCCTCCAGGGCCCTGTTCTCATCTAGGCTGGCTTCTGACACCATCTaGAGGAACTTCCTTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LIFCSHDLPSRALFSSRLASDTI*RNFLSC Trigger: ACAGGAAAGGAAGTTCCTTCAGATGGTGTCAGAAGC...CAGCCTAGATGAGAACAGGGCCCTGGAGGGAAGATCGTGCGAACAGAAGATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148773.2 |
||
| CDS-3UTR GCA 90 bp | AGGATCCAGCTTACAACTGCCTGTAGTTCCAGTTCTAGGGGATCCAACAAACACGCCAGGACTGGTGCATaGTGTCTATCATCCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RIQLTTACSSSSRGSNKHARTGA*CLSSGQ Trigger: CTGACCGGATGATAGACAGCATGCACCAGTCCTGGC...GTGTTTGTTGGATCCCCTAGAACTGGAACTACAGGCAGTTGTAAGCTGGATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR GCA 90 bp | AGTTCCAGTTCTAGGGGATCCAACAAACACTTCTGGCTTCCTTGGGCACTAGGCCAAGAGAAGTGTGAATaGCTGTCCAGTTTTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSRGSNKHFWLPWALGQEKCE*LSSFPG Trigger: GCCGGGAAAACTGGACAGGCATTCACACTTCTCTTG...GCCTAGTGCCCAAGGAAGCCAGAAGTGTTTGTTGGATCCCCTAGAACTGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR CCA 90 bp | CAGTCCAGTCACCATAGTGTTTGCTCACACTCCAGAAGGCATCCTTCAGCTTCAACTTTGCTCACCTGTTaGGCCAGCTCCTTAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSSHHSVCSHSRRHPSASTLLTC*ASSLVG Trigger: TCCCACTAAGGAGCTGGCCCAACAGGTGAGCAAAGT...TGAAGCTGAAGGATGCCTTCTGGAGTGTGAGCAAACACTATGGTGACTGGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR CCA 90 bp | CAGTCCAGTCACCATAGTGTTTGCTCACACTCCAGAAGGCATCCTTCAGCTTCACCATCTGCTGTCTTCTaGACAAGACTCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSSHHSVCSHSRRHPSASPSAVF*TRLSCS Trigger: GGAGCAGGAGAGTCTTGTCCAGAAGACAGCAGATGG...TGAAGCTGAAGGATGCCTTCTGGAGTGTGAGCAAACACTATGGTGACTGGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR CCA 90 bp | GCTGGAGAGATGGCTCAACAGTTAAGAACACTGGCTGCTTTTCCAAAGGACCCACTGGAGGCTGAATCCTaGAGTCTGGTCAATGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGEMAQQLRTLAAFPKDPLEAES*SLVNVV Trigger: GACCACATTGACCAGACTCCAGGATTCAGCCTCCAG...TGGGTCCTTTGGAAAAGCAGCCAGTGTTCTTAACTGTTGAGCCATCTCTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR CCA 90 bp | AAACAAGCTTTGGAAAAACATTTCCTGGGCCCAACACACATGAACCAAACCTCAGCAGCAGTCAGAGCCTaGGGCTGTGTCCTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQALEKHFLGPTHMNQTSAAVRA*GCVLWS Trigger: GCTCCAGAGGACACAGCCCCAGGCTCTGACTGCTGC...TGAGGTTTGGTTCATGTGTGTTGGGCCCAGGAAATGTTTTTCCAAAGCTTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR GCA 90 bp | AGGATCCAGCTTACAACTGCCTGTAGTTCCAGTTCTAGGGGATCCAACAAACACGAGAACAGTAGCTTCTaGAGAGGCATCTGGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RIQLTTACSSSSRGSNKHENSSF*RGIWGT Trigger: TGTCCCCCAGATGCCTCTGCAGAAGCTACTGTTCTC...GTGTTTGTTGGATCCCCTAGAACTGGAACTACAGGCAGTTGTAAGCTGGATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | CTACAGAGCAAGTTCCAGAACAGCCAGGCTATGCAGAGAACCCTGCTCAGTAAACCTATGAGAAACCCATaGTCAGCACTTTCGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSKFQNSQAMQRTLLSKPMRNP*SALSRR Trigger: CCTCCTCGAAAGTGCTGACCATGGGTTTCTCATAGG...TTTACTGAGCAGGGTTCTCTGCATAGCCTGGCTGTTCTGGAACTTGCTCTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | TCTGACCTTCAGACCAGACTTCTCATCAGCAAGATCTTTCAGTTTTGGTCTGTGAGCTTCTCGGGGTCCTaGGTCAGTGTGGCTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SDLQTRLLISKIFQFWSVSFSGS*VSVAEN Trigger: GTTCTCAGCCACACTGACCCAGGACCCCGAGAAGCT...CACAGACCAAAACTGAAAGATCTTGCTGATGAGAAGTCTGGTCTGAAGGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGTCACCATAGTGTTTGCTCACACTCCAGAAGGCATCCTTCAGCTTCACGTTTCTGCTCCTCCTTaGCAGTTTTCTCCAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPVTIVFAHTPEGILQLHVSAPP*QFSPTE Trigger: CTCAGTTGGAGAAAACTGTCAAGGAGGAGCAGAAAC...GTGAAGCTGAAGGATGCCTTCTGGAGTGTGAGCAAACACTATGGTGACTGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGAGATGGCTCAACAGTTAAGAACACTGGCTGCTTTTCCAAAGGACCCAGCTGCCTTCAGTTTCTaGTCCTCCTTGACAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGEMAQQLRTLAAFPKDPAAFSF*SSLTVF Trigger: GAAAACTGTCAAGGAGGAGCAGAAACTGAAGGCAGC...TGGGTCCTTTGGAAAAGCAGCCAGTGTTCTTAACTGTTGAGCCATCTCTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | TCTGACCTTCAGACCAGACTTCTCATCAGCAAGATCTTTCAGTTTTGGTCTGTGGTTGTCCCAGCCTTGTaGAGAAAAGCCGTGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDLQTRLLISKIFQFWSVVVPAL*RKAVAG Trigger: ACCAGCCACGGCTTTTCTCCACAAGGCTGGGACAAC...CACAGACCAAAACTGAAAGATCTTGCTGATGAGAAGTCTGGTCTGAAGGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR GCA 90 bp | TTGTTTCCACTGGAACCCCAAGGAACTTATCTTCTGTTCGCACGATCTTCCCTCGCAACGGAAACCATCTaGTGTCTTCTGGACAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LFPLEPQGTYLLFARSSLATETI*CLLDKT Trigger: AGTCTTGTCCAGAAGACAGCAGATGGTTTCCGTTGC...GAGGGAAGATCGTGCGAACAGAAGATAAGTTCCTTGGGGTTCCAGTGGAAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | AAACAAGCTTTGGAAAAACATTTCCTGGGCCCAACACACATGAACCAAACCTCATTCCTGGGGATCTCATaGTGTGTCAGCTCAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KQALEKHFLGPTHMNQTSFLGIS*CVSSGT Trigger: GGTGCCTGAGCTGACACACCATGAGATCCCCAGGAA...TGAGGTTTGGTTCATGTGTGTTGGGCCCAGGAAATGTTTTTCCAAAGCTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR TCA 90 bp | TCTGACCTTCAGACCAGACTTCTCATCAGCAAGATCTTTCAGTTTTGGTCTGTGTTGAGCAGCTCATCCTaGGGACCAGGTGTAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SDLQTRLLISKIFQFWSVLSSSS*GPGVRQ Trigger: TTGTCTTACACCTGGTCCTCAGGATGAGCTGCTCAA...CACAGACCAAAACTGAAAGATCTTGCTGATGAGAAGTCTGGTCTGAAGGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR GCA 90 bp | AGTCACCATAGTGTTTGCTCACACTCCAGAAGGCATCCTTCAGCTTCACCTGAGAGGAACTTCCTTTCCTaGACTTTCAAGAGAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHHSVCSHSRRHPSASPERNFLS*TFKRSV Trigger: CACACTTCTCTTGAAAGTGCAGGAAAGGAAGTTCCT...CTCAGGTGAAGCTGAAGGATGCCTTCTGGAGTGTGAGCAAACACTATGGTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | CTACAGAGCAAGTTCCAGAACAGCCAGGCTATGCAGAGAACCCTGCTCAGTAAAGTGCTGATAAGGAGCTaGATCTTTCCTTGTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSKFQNSQAMQRTLLSKVLIRS*IFPCSN Trigger: GTTTGAACAAGGAAAGATCCAGCTCCTTATCAGCAC...TTTACTGAGCAGGGTTCTCTGCATAGCCTGGCTGTTCTGGAACTTGCTCTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| 3UTR CAA 72 bp | CCAGTTTTAACCTCTTCTGCAAAATGCCTGATGCTGTaGTCAGTCTTGAACCTCCCACAATGGCTTTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PVLTSSAKCLML*SVLNLPQWLCL Trigger: TAGGCAAAGCCATTGTGGGAGGTTCAAGACTGACAACAGCATCAGGCATTTTGCAGAAGAGGTTAAAACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CCA 90 bp | GGCACTAGGCATATATGCTATACAGACATACATGCAGGTAAACACTCATATATGGGTCCTGGGTCAGTGTaGCTGAGAACAGTAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTRHICYTDIHAGKHSYMGPGSV*LRTVAS Trigger: AGAAGCTACTGTTCTCAGCCACACTGACCCAGGACC...CATATATGAGTGTTTACCTGCATGTATGTCTGTATAGCATATATGCCTAGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR TCA 90 bp | AAACAAGCTTTGGAAAAACATTTCCTGGGCCCAACACACATGAACCAAACCTCACTTTCAAGAGAAGTGTaGATGCCTGTCCAGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQALEKHFLGPTHMNQTSLSREV*MPVQFS Trigger: GGAAAACTGGACAGGCATTCACACTTCTCTTGAAAG...TGAGGTTTGGTTCATGTGTGTTGGGCCCAGGAAATGTTTTTCCAAAGCTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR TCA 90 bp | TCTGACCTTCAGACCAGACTTCTCATCAGCAAGATCTTTCAGTTTTGGTCTGTGTGTCTGTGTAGATGTTaGATACTTTGCTCACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SDLQTRLLISKIFQFWSVCLCRC*ILCSPV Trigger: AACAGGTGAGCAAAGTATTCAACATCTACACAGACA...CACAGACCAAAACTGAAAGATCTTGCTGATGAGAAGTCTGGTCTGAAGGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR TCA 90 bp | CTCATCAGCAAGATCTTTCAGTTTTGGTCTGTGAAAATCCTAGCTCTAATAACTGCTTCTGACACCATCTaGAGGAACTTCCTTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LISKIFQFWSVKILALITASDTI*RNFLSC Trigger: GCAGGAAAGGAAGTTCCTTCAGATGGTGTCAGAAGC...AGTTATTAGAGCTAGGATTTTCACAGACCAAAACTGAAAGATCTTGCTGATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| 3UTR CAA 72 bp | TCAGACCAGACTTCTCATCAGCAAGATCTTTCAGTTTaGGTCTGTGAAAATCCTAGCTCTAATAACTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SDQTSHQQDLSV*VCENPSSNNSH Trigger: ATGTGAGTTATTAGAGCTAGGATTTTCACAGACCAAAACTGAAAGATCTTGCTGATGAGAAGTCTGGTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 90 bp | AGCAGCACTCGAGCCCGGCTGCCCGCCTCTGCGTCCGTATCCCCCTaGCCCGCGGCCTCTGGGCCCGCGTACCGCGCTATGTGGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSTRARLPASASVSP*PAASGPAYRAMWNS Trigger: GCTGTTCCACATAGCGCGGTACGCGGGCCCAGAGGCCGCGGGGCAGGGGGATACGGACGCAGAGGCGGGCAGCCGGGCTCGAGTGCTGCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 90 bp | GTCTCGAGCTCCGGCTCCCGCTGCTGTCGCTCACGGGCTCTGTTCTaGAGCCGCTCGAGCAGCACTCGAGCCCGGCTGCCCGCCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VSSSGSRCCRSRALF*SRSSSTRARLPASA Trigger: CGCAGAGGCGGGCAGCCGGGCTCGAGTGCTGCTCGAGCGGCTGCAGAACAGAGCCCGTGAGCGACAGCAGCGGGAGCCGGAGCTCGAGAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 90 bp | GCCGCTTGCCTGCTGCTGCCGCTTCCCCTTCCCCGGCCGTTCCTGTaGTCTCGAGCTCCGGCTCCCGCTGCTGTCGCTCACGGGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AACLLLPLPLPRPFL*SRAPAPAAVAHGLC Trigger: ACAGAGCCCGTGAGCGACAGCAGCGGGAGCCGGAGCTCGAGACCACAGGAACGGCCGGGGAAGGGGAAGCGGCAGCAGCAGGCAAGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 90 bp | CGGGGGTCTCTGGACATCCTCCTGAGGGTTCGCACCCGGGTCCTCTaGGCCGGCACTGAGCTCCTCCGGAGCCTCCTCACCTCTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGSLDILLRVRTRVL*AGTELLRSLLTSPC Trigger: GCAGGGAGAGGTGAGGAGGCTCCGGAGGAGCTCAGTGCCGGCGCAGAGGACCCGGGTGCGAACCCTCAGGAGGATGTCCAGAGACCCCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS TCA 90 bp | GGACATCCTCCTGAGGGTTCGCACCCGGGTCCTCTGCGCCGGCACTaGGCTCCTCCGGAGCCTCCTCACCTCTCCCTGCGTCCACGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GHPPEGSHPGPLRRH*APPEPPHLSLRPRP Trigger: AGGACGTGGACGCAGGGAGAGGTGAGGAGGCTCCGGAGGAGCTCAGTGCCGGCGCAGAGGACCCGGGTGCGAACCCTCAGGAGGATGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 90 bp | TCCCCTTCCCCGGCCGTTCCTGTGGTCTCGAGCTCCGGCTCCCGCTaGTGTCGCTCACGGGCTCTGTTCTGCAGCCGCTCGAGCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SPSPAVPVVSSSGSR*CRSRALFCSRSSST Trigger: AGTGCTGCTCGAGCGGCTGCAGAACAGAGCCCGTGAGCGACAGCAGCGGGAGCCGGAGCTCGAGACCACAGGAACGGCCGGGGAAGGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 90 bp | TCAGAGCCTGGGGCTGTGTCCTCTGGAGCAGGGCACAGGAACCCGTaGGGCCCTCACTGTAGAAGGCTGCCGCCACCACTCGTGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SEPGAVSSGAGHRNP*GPHCRRLPPPLVAA Trigger: GGCTGCCACGAGTGGTGGCGGCAGCCTTCTACAGTGAGGGCCCCACGGGTTCCTGTGCCCTGCTCCAGAGGACACAGCCCCAGGCTCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 90 bp | CTGGAGCAGGGCACAGGAACCCGTGGGGCCCTCACTGTAGAAGGCTaGCGCCACCACTCGTGGCAGCCAGGACTGGTGCATGCTGTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LEQGTGTRGALTVEG*RHHSWQPGLVHAVY Trigger: ATAGACAGCATGCACCAGTCCTGGCTGCCACGAGTGGTGGCGGCAGCCTTCTACAGTGAGGGCCCCACGGGTTCCTGTGCCCTGCTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 90 bp | GGAACCCGTGGGGCCCTCACTGTAGAAGGCTGCCGCCACCACTCGTaGCAGCCAGGACTGGTGCATGCTGTCTATCATCCGGTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTRGALTVEGCRHHS*QPGLVHAVYHPVSL Trigger: GAGGCTGACCGGATGATAGACAGCATGCACCAGTCCTGGCTGCCACGAGTGGTGGCGGCAGCCTTCTACAGTGAGGGCCCCACGGGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 90 bp | AGGAAGCGGAGCTGCTGGAGGCTGAATCCTGGAGTCTGGTCAATGTaGTCCACCAAGCGGCCAGGTGTGGCCACCACAATGTCGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKRSCWRLNPGVWSM*STKRPGVATTMSAR Trigger: CCTGGCCGACATTGTGGTGGCCACACCTGGCCGCTTGGTGGACCACATTGACCAGACTCCAGGATTCAGCCTCCAGCAGCTCCGCTTCCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 90 bp | TGTTGGGCCAGCTCCTTAGTGGGAAGTACAACCAGTGCACGGATGTaGCAGACCACTCGATGCAACAGGGCCTGTACCACGGGGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: CWASSLVGSTTSARM*QTTRCNRACTTGMT Trigger: TGTCATCCCCGTGGTACAGGCCCTGTTGCATCGAGTGGTCTGCCACATCCGTGCACTGGTTGTACTTCCCACTAAGGAGCTGGCCCAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 90 bp | ACAAGGCTGTCTCATAACGAGCAACCAGCGGCTGCAGGAGCTTCCTaGGGATCTCATGGTGTGTCAGCTCAGGCACCCCAGCTTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: TRLSHNEQPAAAGAS*GSHGVSAQAPQLLT Trigger: TGTCAGAAGCTGGGGTGCCTGAGCTGACACACCATGAGATCCCCAGGAAGCTCCTGCAGCCGCTGGTTGCTCGTTATGAGACAGCCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 90 bp | GCCACCACAATGTCGGCCAGGCAACGGAAACCATCTGCTGTCTTCTaGACAAGACTCTCCTGCTCCTTAGCCAGCGACTTCTGTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ATTMSARQRKPSAVF*TRLSCSLASDFCPV Trigger: GACTGGACAGAAGTCGCTGGCTAAGGAGCAGGAGAGTCTTGTCCAGAAGACAGCAGATGGTTTCCGTTGCCTGGCCGACATTGTGGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 90 bp | TCTATCATCCGGTCAGCCTCATCAATGATCAGGAAGCGGAGCTGCTaGAGGCTGAATCCTGGAGTCTGGTCAATGTGGTCCACCAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SIIRSASSMIRKRSC*RLNPGVWSMWSTKR Trigger: CCGCTTGGTGGACCACATTGACCAGACTCCAGGATTCAGCCTCCAGCAGCTCCGCTTCCTGATCATTGATGAGGCTGACCGGATGATAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS TCA 90 bp | TTTTTGACACAGCTTGGCTTAGCCAACCATGCTGGCAGGAAAGGCTaGACCTTCGGCGTCTTTCTTCTTGCAAAGTCCCCCAGCACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FLTQLGLANHAGRKG*TFGVFLLAKSPSTR Trigger: CCGGGTGCTGGGGGACTTTGCAAGAAGAAAGACGCCGAAGGTTCAGCCTTTCCTGCCAGCATGGTTGGCTAAGCCAAGCTGTGTCAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 90 bp | TCGAGCTGTTCTCCCGACCCTGTGCACATAGGTCCTCAGATATTGTaGGGCATCGTAGTTGATCACCAGCTCCACACCCTGCACATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSCSPDPVHIGPQIL*GIVVDHQLHTLHIN Trigger: ATTGATGTGCAGGGTGTGGAGCTGGTGATCAACTACGATGCCCCACAATATCTGAGGACCTATGTGCACAGGGTCGGGAGAACAGCTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS TCA 90 bp | ACACCATCTGAAGGAACTTCCTTTCCTGCACTTTCAAGAGAAGTGTaGATGCCTGTCCAGTTTTCCCGGCTCGAGCTGTTCTCCCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: TPSEGTSFPALSREV*MPVQFSRLELFSRP Trigger: GGGTCGGGAGAACAGCTCGAGCCGGGAAAACTGGACAGGCATTCACACTTCTCTTGAAAGTGCAGGAAAGGAAGTTCCTTCAGATGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS TCA 90 bp | CTTCCTGGGGATCTCATGGTGTGTCAGCTCAGGCACCCCAGCTTCTaGCACCATCTGAAGGAACTTCCTTTCCTGCACTTTCAAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPGDLMVCQLRHPSF*HHLKELPFLHFQEK Trigger: CTTCTCTTGAAAGTGCAGGAAAGGAAGTTCCTTCAGATGGTGTCAGAAGCTGGGGTGCCTGAGCTGACACACCATGAGATCCCCAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 90 bp | CATCTGAAGGAACTTCCTTTCCTGCACTTTCAAGAGAAGTGTGAATaGCTGTCCAGTTTTCCCGGCTCGAGCTGTTCTCCCGACCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HLKELPFLHFQEKCE*LSSFPGSSCSPDPV Trigger: CACAGGGTCGGGAGAACAGCTCGAGCCGGGAAAACTGGACAGGCATTCACACTTCTCTTGAAAGTGCAGGAAAGGAAGTTCCTTCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 90 bp | CTCAATGGGAGTGAGATCTTCGGTGACACTCTTTTTGACACAGCTTaGCTTAGCCAACCATGCTGGCAGGAAAGGCTGAACCTTCGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LNGSEIFGDTLFDTA*LSQPCWQERLNLRR Trigger: ACGCCGAAGGTTCAGCCTTTCCTGCCAGCATGGTTGGCTAAGCCAAGCTGTGTCAAAAAGAGTGTCACCGAAGATCTCACTCCCATTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CAA 90 bp | CAGTCCAGTCACCATAGTGTTTGCTCACACTCCAGAAGGCATCCTTCAGCTTCAGCAGAGGTCACTAGGTaGGTAGCCACCTCTGCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: QSSHHSVCSHSRRHPSASAEVTR*VATSAY Trigger: ATAGGCAGAGGTGGCTACCAACCTAGTGACCTCTGC...TGAAGCTGAAGGATGCCTTCTGGAGTGTGAGCAAACACTATGGTGACTGGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CAA 90 bp | ATGAGTGAGTTACTCCAAATGTTTCACTGTCTTGTGTCCTCCTGTGGGGTAGCTTTTTCCCACTGCCCGTaGGGGCAGAGACGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MSELLQMFHCLVSSCGVAFSHCP*GQRRRG Trigger: ACCTCTGCGTCTCTGCCCCAACGGGCAGTGGGAAAA...AGCTACCCCACAGGAGGACACAAGACAGTGAAACATTTGGAGTAACTCACTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CAA 90 bp | AGTCACCATAGTGTTTGCTCACACTCCAGAAGGCATCCTTCAGCTTCACCTGAGTTTGTTGTCCCAGCCTaGTGGAGAAAAGCCGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHHSVCSHSRRHPSASPEFVVPA*WRKAVA Trigger: AGCCACGGCTTTTCTCCACAAGGCTGGGACAACAAA...CTCAGGTGAAGCTGAAGGATGCCTTCTGGAGTGTGAGCAAACACTATGGTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS TCA 90 bp | ATCTCATGGTGTGTCAGCTCAGGCACCCCAGCTTCTGACACCATCTaGAGGAACTTCCTTTCCTGCACTTTCAAGAGAAGTGTGAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISWCVSSGTPASDTI*RNFLSCTFKRSVNA Trigger: GGCATTCACACTTCTCTTGAAAGTGCAGGAAAGGAAGTTCCTTCAGATGGTGTCAGAAGCTGGGGTGCCTGAGCTGACACACCATGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CAA 90 bp | AGTTCCAGTTCTAGGGGATCCAACAAACACTTCTGGCTTCCTTGGGCACTAGGCTGTGTCTTTAGGACTTaGTTGTCCCAGCCTTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSRGSNKHFWLPWALGCVFRT*LSQPCG Trigger: TCCACAAGGCTGGGACAACAAAGTCCTAAAGACACA...GCCTAGTGCCCAAGGAAGCCAGAAGTGTTTGTTGGATCCCCTAGAACTGGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS GCA 90 bp | ATCTTCGGTGACACTCTTTTTGACACAGCTTGGCTTAGCCAACCATaGTGGCAGGAAAGGCTGAACCTTCGGCGTCTTTCTTCTTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: IFGDTLFDTAWLSQP*WQERLNLRRLSSCK Trigger: TTTGCAAGAAGAAAGACGCCGAAGGTTCAGCCTTTCCTGCCAGCATGGTTGGCTAAGCCAAGCTGTGTCAAAAAGAGTGTCACCGAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS-3UTR CAA 90 bp | AGTAGCCAAGGAAGTATCTTCAAGGCTGCTGCCAACCTGTTCTTGGGCTCCAGTGAGCTGGATCTTTCCTaGTTCAAACTGCTTCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSQGSIFKAAANLFLGSSELDLS*FKLLQD Trigger: ATCTTGAAGCAGTTTGAACAAGGAAAGATCCAGCTC...ACTGGAGCCCAAGAACAGGTTGGCAGCAGCCTTGAAGATACTTCCTTGGCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CCA 90 bp | TGCACATCAATGCCTCGAGCAGTAGCATCTGTGCTGATAAGGAGCTaGATCTTTCCTTGTTCAAACTGCTTCAAGATTTTCTTCCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CTSMPRAVASVLIRS*IFPCSNCFKIFFLW Trigger: CCAAAGGAAGAAAATCTTGAAGCAGTTTGAACAAGGAAAGATCCAGCTCCTTATCAGCACAGATGCTACTGCTCGAGGCATTGATGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS-3UTR CAA 90 bp | CCCAACACACATGAACCAAACCTCATAACTGCAATCCTCATGCACTTTATATATCAAGATTTTCTTCCTTaGGCCAGGCCCATAGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PNTHEPNLITAILMHFIYQDFLP*ARPIAG Trigger: TCCCGCTATGGGCCTGGCCAAAGGAAGAAAATCTTG...ATATATAAAGTGCATGAGGATTGCAGTTATGAGGTTTGGTTCATGTGTGTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 72 bp | CCGCTCGAGCAGCACTCGAGCCCGGCTGCCCGCCTCTaGGTCCGTATCCCCCTGCCCCGCGGCCTCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLEQHSSPAARL*VRIPLPRGLWA Trigger: GGCCCAGAGGCCGCGGGGCAGGGGGATACGGACGCAGAGGCGGGCAGCCGGGCTCGAGTGCTGCTCGAGCGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS TCA 72 bp | ACCCGGCCTGGAGCCGGGGGTCTCTGGACATCCTCCTaGGGGTTCGCACCCGGGTCCTCTGCGCCGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: TRPGAGGLWTSS*GFAPGSSAPAL Trigger: CAGTGCCGGCGCAGAGGACCCGGGTGCGAACCCTCAGGAGGATGTCCAGAGACCCCCGGCTCCAGGCCGGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 72 bp | TCCGGCTCCCGCTGCTGTCGCTCACGGGCTCTGTTCTaGAGCCGCTCGAGCAGCACTCGAGCCCGGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGSRCCRSRALF*SRSSSTRARLP Trigger: GGGCAGCCGGGCTCGAGTGCTGCTCGAGCGGCTGCAGAACAGAGCCCGTGAGCGACAGCAGCGGGAGCCGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 72 bp | CGCCTCTGCGTCCGTATCCCCCTGCCCCGCGGCCTCTaGGCCCGCGTACCGCGCTATGTGGAACAGCGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RLCVRIPLPRGL*ARVPRYVEQRH Trigger: ATGGCGCTGTTCCACATAGCGCGGTACGCGGGCCCAGAGGCCGCGGGGCAGGGGGATACGGACGCAGAGGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS TCA 72 bp | CCTGAGGGTTCGCACCCGGGTCCTCTGCGCCGGCACTaGGCTCCTCCGGAGCCTCCTCACCTCTCCCTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: PEGSHPGPLRRH*APPEPPHLSLR Trigger: ACGCAGGGAGAGGTGAGGAGGCTCCGGAGGAGCTCAGTGCCGGCGCAGAGGACCCGGGTGCGAACCCTCAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 72 bp | CCGGCCGTTCCTGTGGTCTCGAGCTCCGGCTCCCGCTaGTGTCGCTCACGGGCTCTGTTCTGCAGCCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PAVPVVSSSGSR*CRSRALFCSRS Trigger: CGAGCGGCTGCAGAACAGAGCCCGTGAGCGACAGCAGCGGGAGCCGGAGCTCGAGACCACAGGAACGGCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 72 bp | GGCACTGAGCTCCTCCGGAGCCTCCTCACCTCTCCCTaGGTCCACGTCCTTGTCCGCTTTCCGCCGCTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GTELLRSLLTSP*VHVLVRFPPLR Trigger: GCGAAGCGGCGGAAAGCGGACAAGGACGTGGACGCAGGGAGAGGTGAGGAGGCTCCGGAGGAGCTCAGTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 72 bp | GGGGCTGTGTCCTCTGGAGCAGGGCACAGGAACCCGTaGGGCCCTCACTGTAGAAGGCTGCCGCCACCACTC | + |
|
Preference number: 6 (lower is better) Translates to: GAVSSGAGHRNP*GPHCRRLPPPL Trigger: GAGTGGTGGCGGCAGCCTTCTACAGTGAGGGCCCCACGGGTTCCTGTGCCCTGCTCCAGAGGACACAGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 72 bp | GGCACAGGAACCCGTGGGGCCCTCACTGTAGAAGGCTaGCGCCACCACTCGTGGCAGCCAGGACTGGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GTGTRGALTVEG*RHHSWQPGLVH Trigger: ATGCACCAGTCCTGGCTGCCACGAGTGGTGGCGGCAGCCTTCTACAGTGAGGGCCCCACGGGTTCCTGTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 72 bp | GGGGCCCTCACTGTAGAAGGCTGCCGCCACCACTCGTaGCAGCCAGGACTGGTGCATGCTGTCTATCATCCG | + |
|
Preference number: 6 (lower is better) Translates to: GALTVEGCRHHS*QPGLVHAVYHP Trigger: CGGATGATAGACAGCATGCACCAGTCCTGGCTGCCACGAGTGGTGGCGGCAGCCTTCTACAGTGAGGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CAA 72 bp | CTGGCAGGAAAGGCTGAACCTTCGGCGTCTTTCTTCTaGCAAAGTCCCCCAGCACCCGGCCTGGAGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LAGKAEPSASFF*QSPPAPGLEPG Trigger: CCCCGGCTCCAGGCCGGGTGCTGGGGGACTTTGCAAGAAGAAAGACGCCGAAGGTTCAGCCTTTCCTGCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CAA 90 bp | CCAACCATGCTGGCAGGAAAGGCTGAACCTTCGGCGTCTTTCTTCTaGCAAAGTCCCCCAGCACCCGGCCTGGAGCCGGGGGTCTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PTMLAGKAEPSASFF*QSPPAPGLEPGVSG Trigger: TCCAGAGACCCCCGGCTCCAGGCCGGGTGCTGGGGGACTTTGCAAGAAGAAAGACGCCGAAGGTTCAGCCTTTCCTGCCAGCATGGTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 72 bp | CGTCTTTCTTCTTGCAAAGTCCCCCAGCACCCGGCCTaGAGCCGGGGGTCTCTGGACATCCTCCTGAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RLSSCKVPQHPA*SRGSLDILLRV Trigger: AACCCTCAGGAGGATGTCCAGAGACCCCCGGCTCCAGGCCGGGTGCTGGGGGACTTTGCAAGAAGAAAGACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 72 bp | GCAACCAGCGGCTGCAGGAGCTTCCTGGGGATCTCATaGTGTGTCAGCTCAGGCACCCCAGCTTCTGACACC | + |
|
Preference number: 6 (lower is better) Translates to: ATSGCRSFLGIS*CVSSGTPASDT Trigger: GGTGTCAGAAGCTGGGGTGCCTGAGCTGACACACCATGAGATCCCCAGGAAGCTCCTGCAGCCGCTGGTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 72 bp | AAGGCTGCCGCCACCACTCGTGGCAGCCAGGACTGGTaGATGCTGTCTATCATCCGGTCAGCCTCATCAATG | + |
|
Preference number: 6 (lower is better) Translates to: KAAATTRGSQDW*MLSIIRSASSM Trigger: CATTGATGAGGCTGACCGGATGATAGACAGCATGCACCAGTCCTGGCTGCCACGAGTGGTGGCGGCAGCCTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 72 bp | GAGTCTGGTCAATGTGGTCCACCAAGCGGCCAGGTGTaGCCACCACAATGTCGGCCAGGCAACGGAAACCAT | + |
|
Preference number: 6 (lower is better) Translates to: ESGQCGPPSGQV*PPQCRPGNGNH Trigger: ATGGTTTCCGTTGCCTGGCCGACATTGTGGTGGCCACACCTGGCCGCTTGGTGGACCACATTGACCAGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 72 bp | AGGACTTTGTTGTCCCAGCCTTGTGGAGAAAAGCCGTaGCTGGTAGAGGCCAAGGCGCTGCAGCTTCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RTLLSQPCGEKP*LVEAKALQLLG Trigger: CCCGAGAAGCTGCAGCGCCTTGGCCTCTACCAGCCACGGCTTTTCTCCACAAGGCTGGGACAACAAAGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS CCA 72 bp | TCTCATAACGAGCAACCAGCGGCTGCAGGAGCTTCCTaGGGATCTCATGGTGTGTCAGCTCAGGCACCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SHNEQPAAAGAS*GSHGVSAQAPQ Trigger: CTGGGGTGCCTGAGCTGACACACCATGAGATCCCCAGGAAGCTCCTGCAGCCGCTGGTTGCTCGTTATGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
||
| CDS GCA 72 bp | AGTACAACCAGTGCACGGATGTGGCAGACCACTCGATaGAACAGGGCCTGTACCACGGGGATGACAAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: STTSARMWQTTR*NRACTTGMTKA Trigger: GGCCTTTGTCATCCCCGTGGTACAGGCCCTGTTGCATCGAGTGGTCTGCCACATCCGTGCACTGGTTGTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CAA 72 bp | ACTGCCCGTTGGGGCAGAGACGCAGAGGTCACTAGGTaGGTAGCCACCTCTGCCTATGAGAAACCCATGGTC | + |
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Preference number: 6 (lower is better) Translates to: TARWGRDAEVTR*VATSAYEKPMV Trigger: GACCATGGGTTTCTCATAGGCAGAGGTGGCTACCAACCTAGTGACCTCTGCGTCTCTGCCCCAACGGGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CAA 90 bp | GGCTCGAGCTGTTCTCCCGACCCTGTGCACATAGGTCCTCAGATATaGTGGGGCATCGTAGTTGATCACCAGCTCCACACCCTGCACATC | + |
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Preference number: 6 (lower is better) Translates to: GSSCSPDPVHIGPQI*WGIVVDHQLHTLHI Trigger: GATGTGCAGGGTGTGGAGCTGGTGATCAACTACGATGCCCCACAATATCTGAGGACCTATGTGCACAGGGTCGGGAGAACAGCTCGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CCA 72 bp | AGCTCCTTAGTGGGAAGTACAACCAGTGCACGGATGTaGCAGACCACTCGATGCAACAGGGCCTGTACCACG | + |
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Preference number: 6 (lower is better) Translates to: SSLVGSTTSARM*QTTRCNRACTT Trigger: CGTGGTACAGGCCCTGTTGCATCGAGTGGTCTGCCACATCCGTGCACTGGTTGTACTTCCCACTAAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CCA 72 bp | CGGTCAGCCTCATCAATGATCAGGAAGCGGAGCTGCTaGAGGCTGAATCCTGGAGTCTGGTCAATGTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RSASSMIRKRSC*RLNPGVWSMWS Trigger: GGACCACATTGACCAGACTCCAGGATTCAGCCTCCAGCAGCTCCGCTTCCTGATCATTGATGAGGCTGACCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CAA 90 bp | TGTTTTCCCACTGCCCGTTGGGGCAGAGACGCAGAGGTCACTAGGTaGGTAGCCACCTCTGCCTATGAGAAACCCATGGTCAGCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: CFPTARWGRDAEVTR*VATSAYEKPMVSTF Trigger: GAAAGTGCTGACCATGGGTTTCTCATAGGCAGAGGTGGCTACCAACCTAGTGACCTCTGCGTCTCTGCCCCAACGGGCAGTGGGAAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS TCA 72 bp | CAGCTTGGCTTAGCCAACCATGCTGGCAGGAAAGGCTaGACCTTCGGCGTCTTTCTTCTTGCAAAGTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: QLGLANHAGRKG*TFGVFLLAKSP Trigger: GGGGGACTTTGCAAGAAGAAAGACGCCGAAGGTTCAGCCTTTCCTGCCAGCATGGTTGGCTAAGCCAAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CCA 72 bp | TCTCCCGACCCTGTGCACATAGGTCCTCAGATATTGTaGGGCATCGTAGTTGATCACCAGCTCCACACCCTG | + |
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Preference number: 6 (lower is better) Translates to: SPDPVHIGPQIL*GIVVDHQLHTL Trigger: CAGGGTGTGGAGCTGGTGATCAACTACGATGCCCCACAATATCTGAGGACCTATGTGCACAGGGTCGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CAA 72 bp | TGTTCTCCCGACCCTGTGCACATAGGTCCTCAGATATaGTGGGGCATCGTAGTTGATCACCAGCTCCACACC | + |
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Preference number: 6 (lower is better) Translates to: CSPDPVHIGPQI*WGIVVDHQLHT Trigger: GGTGTGGAGCTGGTGATCAACTACGATGCCCCACAATATCTGAGGACCTATGTGCACAGGGTCGGGAGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS TCA 72 bp | GCACATAGGTCCTCAGATATTGTGGGGCATCGTAGTTaGTCACCAGCTCCACACCCTGCACATCAATGCCTC | + |
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Preference number: 6 (lower is better) Translates to: AHRSSDIVGHRS*SPAPHPAHQCL Trigger: GAGGCATTGATGTGCAGGGTGTGGAGCTGGTGATCAACTACGATGCCCCACAATATCTGAGGACCTATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CAA 72 bp | GCTAATAGGTACAGCCTGTGGGAGTTTTCTCGGGAGTaGGTGAAGCAAAGAGCCCTTGAGCAGCTCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: ANRYSLWEFSRE*VKQRALEQLIL Trigger: CAGGATGAGCTGCTCAAGGGCTCTTTGCTTCACCAACTCCCGAGAAAACTCCCACAGGCTGTACCTATTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CAA 90 bp | AAAGCTTGTGCTAATAGGTACAGCCTGTGGGAGTTTTCTCGGGAGTaGGTGAAGCAAAGAGCCCTTGAGCAGCTCATCCTGAGGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: KACANRYSLWEFSRE*VKQRALEQLILRTR Trigger: CCTGGTCCTCAGGATGAGCTGCTCAAGGGCTCTTTGCTTCACCAACTCCCGAGAAAACTCCCACAGGCTGTACCTATTAGCACAAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS TCA 72 bp | ATGCCATTAGCTCTCAACTGCTTCTGCAGGTCAGGGTaGACCTCAGGGATGTCCTCAATGGGAGTGAGATCT | + |
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Preference number: 6 (lower is better) Translates to: MPLALNCFCRSG*TSGMSSMGVRS Trigger: AGATCTCACTCCCATTGAGGACATCCCTGAGGTTCACCCTGACCTGCAGAAGCAGTTGAGAGCTAATGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS GCA 72 bp | GAACTTCCTTTCCTGCACTTTCAAGAGAAGTGTGAATaGCTGTCCAGTTTTCCCGGCTCGAGCTGTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: ELPFLHFQEKCE*LSSFPGSSCSP Trigger: GGGAGAACAGCTCGAGCCGGGAAAACTGGACAGGCATTCACACTTCTCTTGAAAGTGCAGGAAAGGAAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CAA 72 bp | TCCTCAATGGGAGTGAGATCTTCGGTGACACTCTTTTaGACACAGCTTGGCTTAGCCAACCATGCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSMGVRSSVTLF*TQLGLANHAGR Trigger: CCTGCCAGCATGGTTGGCTAAGCCAAGCTGTGTCAAAAAGAGTGTCACCGAAGATCTCACTCCCATTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CAA 90 bp | GAGCTGGATCTTTCCTTGTTCAAACTGCTTCAAGATTTTCTTCCTTaGGCCAGGCCCATAGCGGGAGGAGAATTCAGCCACACTCACACC | + |
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Preference number: 6 (lower is better) Translates to: ELDLSLFKLLQDFLP*ARPIAGGEFSHTHT Trigger: GGTGTGAGTGTGGCTGAATTCTCCTCCCGCTATGGGCCTGGCCAAAGGAAGAAAATCTTGAAGCAGTTTGAACAAGGAAAGATCCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS TCA 72 bp | TGTGTCAGCTCAGGCACCCCAGCTTCTGACACCATCTaGAGGAACTTCCTTTCCTGCACTTTCAAGAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: CVSSGTPASDTI*RNFLSCTFKRS Trigger: ACTTCTCTTGAAAGTGCAGGAAAGGAAGTTCCTTCAGATGGTGTCAGAAGCTGGGGTGCCTGAGCTGACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CCA 72 bp | AGTGAGATCTTCGGTGACACTCTTTTTGACACAGCTTaGCTTAGCCAACCATGCTGGCAGGAAAGGCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: SEIFGDTLFDTA*LSQPCWQERLN Trigger: GTTCAGCCTTTCCTGCCAGCATGGTTGGCTAAGCCAAGCTGTGTCAAAAAGAGTGTCACCGAAGATCTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CAA 72 bp | GTTTTCATCCACCTCAGCTGTGTCTTTAGGACTTTGTaGTCCCAGCCTTGTGGAGAAAAGCCGTGGCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: VFIHLSCVFRTL*SQPCGEKPWLV Trigger: TACCAGCCACGGCTTTTCTCCACAAGGCTGGGACAACAAAGTCCTAAAGACACAGCTGAGGTGGATGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CAA 72 bp | CTTTCCTTGTTCAAACTGCTTCAAGATTTTCTTCCTTaGGCCAGGCCCATAGCGGGAGGAGAATTCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LSLFKLLQDFLP*ARPIAGGEFSH Trigger: GTGGCTGAATTCTCCTCCCGCTATGGGCCTGGCCAAAGGAAGAAAATCTTGAAGCAGTTTGAACAAGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CAA 90 bp | GCCTCGAGCAGTAGCATCTGTGCTGATAAGGAGCTGGATCTTTCCTaGTTCAAACTGCTTCAAGATTTTCTTCCTTTGGCCAGGCCCATA | + |
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Preference number: 6 (lower is better) Translates to: ASSSSICADKELDLS*FKLLQDFLPLARPI Trigger: TATGGGCCTGGCCAAAGGAAGAAAATCTTGAAGCAGTTTGAACAAGGAAAGATCCAGCTCCTTATCAGCACAGATGCTACTGCTCGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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| CDS CCA 72 bp | ATGCCTCGAGCAGTAGCATCTGTGCTGATAAGGAGCTaGATCTTTCCTTGTTCAAACTGCTTCAAGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: MPRAVASVLIRS*IFPCSNCFKIF Trigger: GAAAATCTTGAAGCAGTTTGAACAAGGAAAGATCCAGCTCCTTATCAGCACAGATGCTACTGCTCGAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031478.6 |
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