Pregenerated sensors for DDX5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020719Ensembl transcript IDs: ENSMUST00000021062.12, ENSMUST00000123339.2, ENSMUST00000127481.8, ENSMUST00000129585.8, ENSMUST00000133426.8
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGGAGGAACTTTCAAGGCACTTTCTTTTCCCACTGACTATGTGTaGGAAGTTGGTCCTGCTCTAGGTCTCATGTGCCAGTACTCACCA | + |
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Preference number: 1 (lower is better) Translates to: EGGTFKALSFPTDYV*EVGPALGLMCQYSP Trigger: TGGTGAGTACTGGCACATGAGACCTAGAGCAGGACCAACTTCTCACACATAGTCAGTGGGAAAAGAAAGTGCCTTGAAAGTTCCTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR TCA 90 bp | CCGGAGAGAACAGTTTATGGGGCAGAGGTGGTATGTTCTGCCCTTTaGAGATTACTGGCACACTTTCAGCTTTTCACCTCTCTAATCGAC | + |
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Preference number: 1 (lower is better) Translates to: PERTVYGAEVVCSAL*RLLAHFQLFTSLID Trigger: GTCGATTAGAGAGGTGAAAAGCTGAAAGTGTGCCAGTAATCTTCAAAGGGCAGAACATACCACCTCTGCCCCATAAACTGTTCTCTCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR GCA 90 bp | ATTACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCTTaGCAAGACCTTACAACTGCAGCTGCAAGAAAAACATACCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: ITLIRSSKLWPHCLS*QDLTTAAARKTYLS Trigger: GGACAGGTATGTTTTTCTTGCAGCTGCAGTTGTAAGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR CCA 90 bp | AATGTAAAGGTCCTTTGCATTACACTCATCAGAAGTTCAAAACTCTaGCCACACTGCTTGTCTTGCCAAGACCTTACAACTGCAGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: NVKVLCITLIRSSKL*PHCLSCQDLTTAAA Trigger: TGCAGCTGCAGTTGTAAGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTAATGCAAAGGACCTTTACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR GCA 90 bp | TCCCAAATTGACAGTCCCCTTACAGATCATCAAGTGACATCTGAATaGTTCTGCGCAGTAGGGCCAATTAAAAGTTTCTCAGCAATCTCT | + |
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Preference number: 1 (lower is better) Translates to: SQIDSPLTDHQVTSE*FCAVGPIKSFSAIS Trigger: AGAGATTGCTGAGAAACTTTTAATTGGCCCTACTGCGCAGAAGCATTCAGATGTCACTTGATGATCTGTAAGGGGACTGTCAATTTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR CCA 90 bp | TCCATATTGCTGAGTGCTATCATAACCGTTCTGGTAAGTCCCTGTTaGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGATACAAA | + |
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Preference number: 1 (lower is better) Translates to: SILLSAIITVLVSPC*ITSPKTGLYASRYK Trigger: TTTGTATCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAGAACGGTTATGATAGCACTCAGCAATATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR GCA 90 bp | CTGAAACTCAAAGACCCACAGATCACAGTGAACAGTTTGAAACAATaGTGTACCATGGCAATCATGCAAAGCATGGGACAGATGAAATAC | + |
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Preference number: 1 (lower is better) Translates to: LKLKDPQITVNSLKQ*CTMAIMQSMGQMKY Trigger: GTATTTCATCTGTCCCATGCTTTGCATGATTGCCATGGTACAGCATTGTTTCAAACTGTTCACTGTGATCTGTGGGTCTTTGAGTTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR GCA 90 bp | ATTGACAGTCCCCTTACAGATCATCAAGTGACATCTGAATGCTTCTaGGCAGTAGGGCCAATTAAAAGTTTCTCAGCAATCTCTTCATGT | + |
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Preference number: 1 (lower is better) Translates to: IDSPLTDHQVTSECF*AVGPIKSFSAISSC Trigger: ACATGAAGAGATTGCTGAGAAACTTTTAATTGGCCCTACTGCGCAGAAGCATTCAGATGTCACTTGATGATCTGTAAGGGGACTGTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR CAA 90 bp | GCAGCCAGCCGATCACTAGTCCTCCATCCCCCTCGAGTCCTCCGATaGTCATGCCTAGGCCTTGCCACAAAGACTGCACCTTTATGTGAA | + |
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Preference number: 2 (lower is better) Translates to: AASRSLVLHPPRVLR*SCLGLATKTAPLCE Trigger: TTCACATAAAGGTGCAGTCTTTGTGGCAAGGCCTAGGCATGACAATCGGAGGACTCGAGGGGGATGGAGGACTAGTGATCGGCTGGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTACCCACCCCTGGAACGACCTaGACCTCTGTCTTCGACCAA | + |
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Preference number: 2 (lower is better) Translates to: LLPAEYLSRRSSFMPPLPTPGTT*TSVFDQ Trigger: TTGGTCGAAGACAGAGGTTCAGGTCGTTCCAGGGGT...GGGTAGAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTACCCGACGATCGTCCTTCATaGCTCCTCTACCCCTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: LLPAEYLSRRSSFMPPLPDDRPS*LLYPWN Trigger: GTTCCAGGGGTAGAGGAGGCATGAAGGACGATCGTC...GGGTAGAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTACCCCTGGAAGTCCTCCGATTGTCATaGCTAGGCCTTGCCACAAAG | + |
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Preference number: 2 (lower is better) Translates to: PAEYLSRRSSFMPPLPLEVLRLS*LGLATK Trigger: CTTTGTGGCAAGGCCTAGGCATGACAATCGGAGGAC...TTCCAGGGGTAGAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR TCA 90 bp | CACCCCTTTTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTCATCAAGTGACATCTaGATGCTTCTGCGCAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: HPFCLQSICHDDRPSCLLSSSDI*MLLRSR Trigger: CCTACTGCGCAGAAGCATTCAGATGTCACTTGATGA...GAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAAAAGGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR CAA 90 bp | ACTGTGTCTCGTCTAGGCAAGCGCTTCCAAGAAGCCAGGATTCACTaGAGAATGTGTCTCTCTCTGGCAGGTCTCGACATGACGACTACT | + |
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Preference number: 2 (lower is better) Translates to: TVSRLGKRFQEARIH*RMCLSLAGLDMTTT Trigger: AGTAGTCGTCATGTCGAGACCTGCCAGAGAGAGACACATTCTCAAGTGAATCCTGGCTTCTTGGAAGCGCTTGCCTAGACGAGACACAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | CACCCCTTTTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTGCCTGTTTTGGTACTaGGAGCAGTTCTTCCAATTC | + |
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Preference number: 2 (lower is better) Translates to: HPFCLQSICHDDRPSCLLCLFWY*EQFFQF Trigger: GAATTGGAAGAACTGCTCGCAGTACCAAAACAGGCA...GAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAAAAGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
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| 3UTR-3UTR CCA 90 bp | CACCCCTTTTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCCTATGTGTGAGAAGTTaGTCCTGCTCTAGGTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: HPFCLQSICHDDRPSCLLLCVRS*SCSRSH Trigger: ATGAGACCTAGAGCAGGACCAACTTCTCACACATAG...GAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAAAAGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTACCCCTGGAACTGTCTTCGACCAACTaGAGCAACTTGGGATTAATT | + |
|
Preference number: 2 (lower is better) Translates to: PAEYLSRRSSFMPPLPLELSSTN*SNLGLI Trigger: AATTAATCCCAAGTTGCTTCAGTTGGTCGAAGACAG...TTCCAGGGGTAGAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTACCCCTGGAACAACTTGGGATTAATTaGTTGATTAGCTTCCCGAAG | + |
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Preference number: 2 (lower is better) Translates to: PAEYLSRRSSFMPPLPLEQLGIN*LISFPK Trigger: CTTCGGGAAGCTAATCAAGCAATTAATCCCAAGTTG...TTCCAGGGGTAGAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | CACCCCTTTTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCCCAAGACCTTACAACTaGAGCTGCAAGAAAAACATA | + |
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Preference number: 2 (lower is better) Translates to: HPFCLQSICHDDRPSCLLPRPYN*SCKKNI Trigger: TATGTTTTTCTTGCAGCTGCAGTTGTAAGGTCTTGG...GAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAAAAGGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCATTACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCTTGCCATGCCTCCTCTACCCCTaGAACGACCTGAACCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: LHYTHQKFKTLATLLVLPCLLYP*NDLNLC Trigger: ACAGAGGTTCAGGTCGTTCCAGGGGTAGAGGAGGCA...TGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTAATGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTACCCCTGGTAAGTCCCTGTTaGATTACCAGTCCTAAAACT | + |
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Preference number: 2 (lower is better) Translates to: LLPAEYLSRRSSFMPPLPLVSPC*ITSPKT Trigger: AGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG...GGGTAGAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
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| 3UTR-3UTR CCA 90 bp | CACCCCTTTTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCCCCTTTGAAGATTACTaGCACACTTTCAGCTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: HPFCLQSICHDDRPSCLLPFEDY*HTFSFS Trigger: TGAAAAGCTGAAAGTGTGCCAGTAATCTTCAAAGGG...GAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAAAAGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR CAA 90 bp | CCCGGAGAGAACAGTTTATGGGGCAGAGGTGGTATGTTCTGCCCTTaGAAGATTACTGGCACACTTTCAGCTTTTCACCTCTCTAATCGA | + |
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Preference number: 2 (lower is better) Translates to: PGENSLWGRGGMFCP*KITGTLSAFHLSNR Trigger: TCGATTAGAGAGGTGAAAAGCTGAAAGTGTGCCAGTAATCTTCAAAGGGCAGAACATACCACCTCTGCCCCATAAACTGTTCTCTCCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTACCCCTGTGTAAAGAAAGTGTATaGTGTGCCTGTTTTGGTACT | + |
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Preference number: 2 (lower is better) Translates to: LPAEYLSRRSSFMPPLPLCKESV*CACFGT Trigger: AGTACCAAAACAGGCACAGCATACACTTTCTTTACA...CAGGGGTAGAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAAACTCTGGCCACACTGCTTGTCTTGCCAAGACCTTACAACTGCAGCTGCAGCTCTAGGTCTCATGTaGCAGTACTCACCAATTTGT | + |
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Preference number: 2 (lower is better) Translates to: SKLWPHCLSCQDLTTAAAALGLM*QYSPIC Trigger: ACAAATTGGTGAGTACTGGCACATGAGACCTAGAGC...TGCAGCTGCAGTTGTAAGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | TACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCTTGCCAAGACCTGTGAGAAGTTGGTCCTaGTCTAGGTCTCATGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: YTHQKFKTLATLLVLPRPVRSWS*SRSHVP Trigger: TGGCACATGAGACCTAGAGCAGGACCAACTTCTCAC...AGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR TCA 90 bp | TACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCTTGCCAAGACCTAAAGCATGGGACAGATaGAATACCACGGCAGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: YTHQKFKTLATLLVLPRPKAWDR*NTTAVN Trigger: GTTCACTGCCGTGGTATTTCATCTGTCCCATGCTTT...AGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGTAAGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGATTGGGATTAATTGCTTaGTTAGCTTCCCGAAGCACA | + |
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Preference number: 2 (lower is better) Translates to: LVSPCWITSPKTGLYASRLGLIA*LASRST Trigger: TGTGCTTCGGGAAGCTAATCAAGCAATTAATCCCAA...TCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCCACCATAATTACTGCTaGACTGCAGTCATTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RTRNLQGNPALKTQCTQLHHNYC*TAVISA Trigger: TGCAGAAATGACTGCAGTGCAGCAGTAATTATGGTG...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAAGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGACACCATAATTACTGCTaGACTGCAGTCATTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: LVSPCWITSPKTGLYASRHHNYC*TAVISA Trigger: TGCAGAAATGACTGCAGTGCAGCAGTAATTATGGTG...TCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCGTGCACCATAATTACTaGTGCACTGCAGTCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: RTRNLQGNPALKTQCTQLVHHNY*CTAVIS Trigger: AGAAATGACTGCAGTGCAGCAGTAATTATGGTGCAC...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAAGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGAGTGCACCATAATTACTaGTGCACTGCAGTCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: LVSPCWITSPKTGLYASRVHHNY*CTAVIS Trigger: AGAAATGACTGCAGTGCAGCAGTAATTATGGTGCAC...TCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAAACTCTGGCCACACTGCTTGTCTTGCCAAGACCTTACAACTGCAGCTGCACCCATTGGTGTAATTTaGAGCACTGTAAACACCATT | + |
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Preference number: 2 (lower is better) Translates to: SKLWPHCLSCQDLTTAAAPIGVI*STVNTI Trigger: AATGGTGTTTACAGTGCTGCAAATTACACCAATGGG...TGCAGCTGCAGTTGTAAGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTTTGAAACAATGCTGTACCATGGCAATCATGCAAAGCATGGGACAGATGAAGTCATGCCTAGGCCTTaGCACAAAGACTGCACCTTT | + |
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Preference number: 2 (lower is better) Translates to: QFETMLYHGNHAKHGTDEVMPRP*HKDCTF Trigger: AAAGGTGCAGTCTTTGTGGCAAGGCCTAGGCATGAC...TTCATCTGTCCCATGCTTTGCATGATTGCCATGGTACAGCATTGTTTCAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCCTTTGCATTACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCAGAGGTGGTATGTTCTaGCCTTTGAAGATTACTGGC | + |
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Preference number: 2 (lower is better) Translates to: GPLHYTHQKFKTLATLLVRGGMF*PLKITG Trigger: GCCAGTAATCTTCAAAGGGCAGAACATACCACCTCT...GACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTAATGCAAAGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCTTCGACCAACTGAAGCAACTTGGGATTAATTGCTTGATTAGCTTCCCGATGCTGTGCCTGTTTTaGTACTGCGAGCAGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SVFDQLKQLGINCLISFPMLCLF*YCEQFF Trigger: GAAGAACTGCTCGCAGTACCAAAACAGGCACAGCAT...CGGGAAGCTAATCAAGCAATTAATCCCAAGTTGCTTCAGTTGGTCGAAGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGTAAGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGATTCCAAAGCTCCCATTaGTGTAATTTGCAGCACTGT | + |
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Preference number: 2 (lower is better) Translates to: LVSPCWITSPKTGLYASRFQSSH*CNLQHC Trigger: ACAGTGCTGCAAATTACACCAATGGGAGCTTTGGAA...TCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGATACAAAGGAGAGAACAGTTTATaGGGCAGAGGTGGTATGTTC | + |
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Preference number: 2 (lower is better) Translates to: SPCWITSPKTGLYASRYKGENSL*GRGGMF Trigger: GAACATACCACCTCTGCCCCATAAACTGTTCTCTCC...TTTGTATCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR CAA 90 bp | GCAAACTCACTGAAACTCAAAGACCCACAGATCACAGTGAACAGTTaGAAACAATGCTGTACCATGGCAATCATGCAAAGCATGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: ANSLKLKDPQITVNS*KQCCTMAIMQSMGQ Trigger: CTGTCCCATGCTTTGCATGATTGCCATGGTACAGCATTGTTTCAAACTGTTCACTGTGATCTGTGGGTCTTTGAGTTTCAGTGAGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR TCA 90 bp | GGTCCTTTGCATTACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCCTGTCTTCGACCAACTaGAGCAACTTGGGATTAATT | + |
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Preference number: 2 (lower is better) Translates to: GPLHYTHQKFKTLATLLVLSSTN*SNLGLI Trigger: AATTAATCCCAAGTTGCTTCAGTTGGTCGAAGACAG...GACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTAATGCAAAGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGCAACTTGGGATTAATTGCTTGATTAGCTTCCCGAAGCACAGAGATAAGATGCTGTGCCTGTTTTaGTACTGCGAGCAGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LKQLGINCLISFPKHRDKMLCLF*YCEQFF Trigger: GAAGAACTGCTCGCAGTACCAAAACAGGCACAGCAT...CTTATCTCTGTGCTTCGGGAAGCTAATCAAGCAATTAATCCCAAGTTGCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
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| 3UTR CAA 90 bp | CTTTGCATTACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTaGTCTTGCCAAGACCTTACAACTGCAGCTGCAAGAAAAACATAC | + |
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Preference number: 2 (lower is better) Translates to: LCITLIRSSKLWPHC*SCQDLTTAAARKTY Trigger: GTATGTTTTTCTTGCAGCTGCAGTTGTAAGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTAATGCAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTGCACATTTCGGCAGTTaGCAACAAAACCAAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: TFRPTYSHSETKLFAGDPAHFGS*QQNQEM Trigger: CATCTCTTGGTTTTGTTGTCAACTGCCGAAATGTGC...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| 3UTR-3UTR GCA 90 bp | TTGAAGATTACTGGCACACTTTCAGCTTTTCACCTCTCTAATCGACTGGAAGCATGTAAAGAAAGTGTATaGTGTGCCTGTTTTGGTACT | + |
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Preference number: 2 (lower is better) Translates to: LKITGTLSAFHLSNRLEACKESV*CACFGT Trigger: AGTACCAAAACAGGCACAGCATACACTTTCTTTACA...TGCTTCCAGTCGATTAGAGAGGTGAAAAGCTGAAAGTGTGCCAGTAATCTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR GCA 90 bp | ACATCTGAATGCTTCTGCGCAGTAGGGCCAATTAAAAGTTTCTCAGCAATCTCTAACAGTTTGAAACAATaGTGTACCATGGCAATCATG | + |
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Preference number: 2 (lower is better) Translates to: TSECFCAVGPIKSFSAISNSLKQ*CTMAIM Trigger: CATGATTGCCATGGTACAGCATTGTTTCAAACTGTT...AGAGATTGCTGAGAAACTTTTAATTGGCCCTACTGCGCAGAAGCATTCAGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCATTACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCTTGCCATCAAATATCTTTTATTaGAAGGCCATGCATTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LHYTHQKFKTLATLLVLPSNIFY*KAMHCL Trigger: AAGGCAATGCATGGCCTTCCAATAAAAGATATTTGA...TGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTAATGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR-3UTR CCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTTCAAATATCTTTTATTaGAAGGCCATGCATTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: TFRPTYSHSETKLFAGDPSNIFY*KAMHCL Trigger: AAGGCAATGCATGGCCTTCCAATAAAAGATATTTGA...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| 3UTR GCA 72 bp | TGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATaGCTCCTCTACCCCTGGAACGACCTGAACCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CLQSICHDDRPS*LLYPWNDLNLC Trigger: ACAGAGGTTCAGGTCGTTCCAGGGGTAGAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
||
| 3UTR GCA 72 bp | CTAGTCCTCCATCCCCCTCGAGTCCTCCGATTGTCATaGCTAGGCCTTGCCACAAAGACTGCACCTTTATGT | + |
|
Preference number: 3 (lower is better) Translates to: LVLHPPRVLRLS*LGLATKTAPLC Trigger: ACATAAAGGTGCAGTCTTTGTGGCAAGGCCTAGGCATGACAATCGGAGGACTCGAGGGGGATGGAGGACTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR-3UTR CAA 90 bp | TACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCTTGCCAAGACCTCCTCGAGTCCTCCGATaGTCATGCCTAGGCCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: YTHQKFKTLATLLVLPRPPRVLR*SCLGLA Trigger: GGCAAGGCCTAGGCATGACAATCGGAGGACTCGAGG...AGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCTTTTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCGATAAGGTCGCTCACTaGCTTTATGTTATTAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: HPFCLQSICHDDRPSCLLDKVAH*LYVIRC Trigger: ACACCTAATAACATAAAGCAAGTGAGCGACCTTATC...GAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAAAAGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTAAGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGATATGCTGTGCCTGTTTaGGTACTGCGAGCAGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LVSPCWITSPKTGLYASRYAVPV*VLRAVL Trigger: AAGAACTGCTCGCAGTACCAAAACAGGCACAGCATA...TCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTAAGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGACTTGGGATTAATTGCTaGATTAGCTTCCCGAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LVSPCWITSPKTGLYASRLGINC*ISFPKH Trigger: GTGCTTCGGGAAGCTAATCAAGCAATTAATCCCAAG...TCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATCTGAATGCTTCTGCGCAGTAGGGCCAATTAAAAGTTTCTCAGCAATCTCTGCCACACTGCTTGTCTaGCCAAGACCTTACAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: TSECFCAVGPIKSFSAISATLLV*PRPYNC Trigger: GCAGTTGTAAGGTCTTGGCAAGACAAGCAGTGTGGC...AGAGATTGCTGAGAAACTTTTAATTGGCCCTACTGCGCAGAAGCATTCAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR TCA 72 bp | ACTTTCAAGGCACTTTCTTTTCCCACTGACTATGTGTaGGAAGTTGGTCCTGCTCTAGGTCTCATGTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TFKALSFPTDYV*EVGPALGLMCQ Trigger: CTGGCACATGAGACCTAGAGCAGGACCAACTTCTCACACATAGTCAGTGGGAAAAGAAAGTGCCTTGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR TCA 72 bp | AATTTGCACATGTCAGCTGTCTTAACACCCACCCACTaGCAGCCTATCAAGGGAATGTGTGTTCTCCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: NLHMSAVLTPTH*QPIKGMCVLLS Trigger: GCTAAGGAGAACACACATTCCCTTGATAGGCTGTCAGTGGGTGGGTGTTAAGACAGCTGACATGTGCAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR CCA 72 bp | CTGAGTGCTATCATAACCGTTCTGGTAAGTCCCTGTTaGATTACCAGTCCTAAAACTGGTCTGTATGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSAIITVLVSPC*ITSPKTGLYAS Trigger: GCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAGAACGGTTATGATAGCACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGATACAAATATGCTGTGCCTGTTTaGGTACTGCGAGCAGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SPCWITSPKTGLYASRYKYAVPV*VLRAVL Trigger: AAGAACTGCTCGCAGTACCAAAACAGGCACAGCATA...TTTGTATCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTAAGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGATCCCATTGGTGTAATTaGCAGCACTGTAAACACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LVSPCWITSPKTGLYASRSHWCN*QHCKHH Trigger: ATGGTGTTTACAGTGCTGCAAATTACACCAATGGGA...TCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
||
| 3UTR-3UTR CAA 90 bp | TACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCTTGCCAAGACCTGGTATGTTCTGCCCTTaGAAGATTACTGGCACACTT | + |
|
Preference number: 3 (lower is better) Translates to: YTHQKFKTLATLLVLPRPGMFCP*KITGTL Trigger: AAGTGTGCCAGTAATCTTCAAAGGGCAGAACATACC...AGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR TCA 72 bp | ACAGTTTATGGGGCAGAGGTGGTATGTTCTGCCCTTTaGAGATTACTGGCACACTTTCAGCTTTTCACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TVYGAEVVCSAL*RLLAHFQLFTS Trigger: AGAGGTGAAAAGCTGAAAGTGTGCCAGTAATCTTCAAAGGGCAGAACATACCACCTCTGCCCCATAAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR GCA 72 bp | GGAGAGAACAGTTTATGGGGCAGAGGTGGTATGTTCTaGCCTTTGAAGATTACTGGCACACTTTCAGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GENSLWGRGGMF*PLKITGTLSAF Trigger: AAAAGCTGAAAGTGTGCCAGTAATCTTCAAAGGGCAGAACATACCACCTCTGCCCCATAAACTGTTCTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCATTACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCTTGCCACTTGGGATTAATTGCTaGATTAGCTTCCCGAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LHYTHQKFKTLATLLVLPLGINC*ISFPKH Trigger: GTGCTTCGGGAAGCTAATCAAGCAATTAATCCCAAG...TGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTAATGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR GCA 72 bp | TCTGTCTTCGACCAACTGAAGCAACTTGGGATTAATTaGTTGATTAGCTTCCCGAAGCACAGAGATAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SVFDQLKQLGIN*LISFPKHRDKV Trigger: GACCTTATCTCTGTGCTTCGGGAAGCTAATCAAGCAATTAATCCCAAGTTGCTTCAGTTGGTCGAAGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
||
| 3UTR GCA 72 bp | AAAGACCCACAGATCACAGTGAACAGTTTGAAACAATaGTGTACCATGGCAATCATGCAAAGCATGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: KDPQITVNSLKQ*CTMAIMQSMGQ Trigger: CTGTCCCATGCTTTGCATGATTGCCATGGTACAGCATTGTTTCAAACTGTTCACTGTGATCTGTGGGTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR GCA 72 bp | ATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCTTaGCAAGACCTTACAACTGCAGCTGCAAGAAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: IRSSKLWPHCLS*QDLTTAAARKT Trigger: TGTTTTTCTTGCAGCTGCAGTTGTAAGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR GCA 72 bp | GACAGTCCCCTTACAGATCATCAAGTGACATCTGAATaGTTCTGCGCAGTAGGGCCAATTAAAAGTTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DSPLTDHQVTSE*FCAVGPIKSFS Trigger: TGAGAAACTTTTAATTGGCCCTACTGCGCAGAAGCATTCAGATGTCACTTGATGATCTGTAAGGGGACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR CCA 72 bp | GTCCTTTGCATTACACTCATCAGAAGTTCAAAACTCTaGCCACACTGCTTGTCTTGCCAAGACCTTACAACT | + |
|
Preference number: 3 (lower is better) Translates to: VLCITLIRSSKL*PHCLSCQDLTT Trigger: AGTTGTAAGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTAATGCAAAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCTTCAAATATCTTTTATaGGAAGGCCATGCATTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RTRNLQGNPALKTQCTQLFKYLL*EGHALP Trigger: AGGCAATGCATGGCCTTCCAATAAAAGATATTTGAA...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| 3UTR CCA 72 bp | TGCCAGCAGATACAAAATTACTTCCAAAGCTCCCATTaGTGTAATTTGCAGCACTGTAAACACCATTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CQQIQNYFQSSH*CNLQHCKHHSE Trigger: CTCAGAATGGTGTTTACAGTGCTGCAAATTACACCAATGGGAGCTTTGGAAGTAATTTTGTATCTGCTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATCTGAATGCTTCTGCGCAGTAGGGCCAATTAAAAGTTTCTCAGCAATCTCTTTCAAATATCTTTTATaGGAAGGCCATGCATTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TSECFCAVGPIKSFSAISFKYLL*EGHALP Trigger: AGGCAATGCATGGCCTTCCAATAAAAGATATTTGAA...AGAGATTGCTGAGAAACTTTTAATTGGCCCTACTGCGCAGAAGCATTCAGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR GCA 90 bp | CCGATCACTAGTCCTCCATCCCCCTCGAGTCCTCCGATTGTCATGCCTAGGCCTGCCACTTGCTGCACCTaGTGTGCCAGTTCTCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PITSPPSPSSPPIVMPRPATCCT*CASSRV Trigger: AACTCGAGAACTGGCACAGCAGGTGCAGCAAGTGGC...AGGCCTAGGCATGACAATCGGAGGACTCGAGGGGGATGGAGGACTAGTGATCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTACCCCTGCACCATGGATGCCCATaGCAGGCCACCCATCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPAEYLSRRSSFMPPLPLHHGCP*QATHLS Trigger: GGAGAGATGGGTGGCCTGCCATGGGCATCCATGGTG...CAGGGGTAGAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTACCCCTGCCCTCCAAATCGAGGTaGACCAAACCCTCGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPAEYLSRRSSFMPPLPLPSKSR*TKPSIP Trigger: CGGGATCGAGGGTTTGGTGCACCTCGATTTGGAGGG...CAGGGGTAGAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
||
| 3UTR CAA 72 bp | CGATCACTAGTCCTCCATCCCCCTCGAGTCCTCCGATaGTCATGCCTAGGCCTTGCCACAAAGACTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLVLHPPRVLR*SCLGLATKTAP Trigger: AGGTGCAGTCTTTGTGGCAAGGCCTAGGCATGACAATCGGAGGACTCGAGGGGGATGGAGGACTAGTGATCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCCACCATGGATGCCCATaGCAGGCCACCCATCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLHHGCP*QATHLS Trigger: GGAGAGATGGGTGGCCTGCCATGGGCATCCATGGTG...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCCCCTCCAAATCGAGGTaGACCAAACCCTCGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLPSKSR*TKPSIP Trigger: CGGGATCGAGGGTTTGGTGCACCTCGATTTGGAGGG...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR TCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCACCCCTGGAACGACCTaGACCTCTGTCTTCGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLTPGTT*TSVFDQ Trigger: TTGGTCGAAGACAGAGGTTCAGGTCGTTCCAGGGGT...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | GGTCCTTTGCATTACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCCCCTCCAAATCGAGGTaGACCAAACCCTCGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GPLHYTHQKFKTLATLLVPSKSR*TKPSIP Trigger: CGGGATCGAGGGTTTGGTGCACCTCGATTTGGAGGG...GACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTAATGCAAAGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCTTGCTGCACCTGCTGTaGCAGTTCTCGAGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLLLHLL*QFSSWC Trigger: GCACCAACTCGAGAACTGGCACAGCAGGTGCAGCAA...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | CTGGTAAGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGATTGCTGCACCTGCTGTaGCAGTTCTCGAGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSPCWITSPKTGLYASRLLHLL*QFSSWC Trigger: GCACCAACTCGAGAACTGGCACAGCAGGTGCAGCAA...TCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCGCCACTTGCTGCACCTaGTGTGCCAGTTCTCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLATCCT*CASSRV Trigger: AACTCGAGAACTGGCACAGCAGGTGCAGCAAGTGGC...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR TCA 90 bp | TTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTACCCCTGGGTTTTGGACAGTTGTaGCCTCTAACTGTAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPAEYLSRRSSFMPPLPLGFGQL*PLTVIS Trigger: GGAAATTACAGTTAGAGGTCACAACTGTCCAAAACC...CAGGGGTAGAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCCATAGGCGCAGCAGCTaGGGTAGCAGGATATGCATA | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLHRRSS*GSRICI Trigger: TATGCATATCCTGCTACCGCAGCTGCTGCGCCTATG...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR CCA 90 bp | TCAAAACTCTGGCCACACTGCTTGTCTTGCCAAGACCTTACAACTGCAGCTGCATGCCAGTTCTCGAGTTaGTGCCAGCACCAAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKLWPHCLSCQDLTTAAACQFSS*CQHQAN Trigger: ATTTGCTTGGTGCTGGCACCAACTCGAGAACTGGCA...TGCAGCTGCAGTTGTAAGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCTTTGCATTACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCCAGTCACGTTCCTGCTaGCTCTTGTCACCATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GPLHYTHQKFKTLATLLVQSRSC*LLSPWM Trigger: CATCCATGGTGACAAGAGTCAGCAGGAACGTGACTG...GACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTAATGCAAAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCTGCCAGTTCTCGAGTTaGTGCCAGCACCAAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLCQFSS*CQHQAN Trigger: ATTTGCTTGGTGCTGGCACCAACTCGAGAACTGGCA...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR TCA 90 bp | CTGAAGCAACTTGGGATTAATTGCTTGATTAGCTTCCCGAAGCACAGAGATAAGCCATATCCAATCCACTaGGAGCAACTGGCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKQLGINCLISFPKHRDKPYPIH*EQLASP Trigger: AGGGCTGGCCAGTTGCTCTCAGTGGATTGGATATGG...CTTATCTCTGTGCTTCGGGAAGCTAATCAAGCAATTAATCCCAAGTTGCTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTTCGACCAACTGAAGCAACTTGGGATTAATTGCTTGATTAGCTTCCCGTTGTGCGGTGCGCCTTaGCAAATCAGGGTGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVFDQLKQLGINCLISFPLCGAP*QIRVFL Trigger: CAAGAACACCCTGATTTGGCAAGGCGCACCGCACAA...CGGGAAGCTAATCAAGCAATTAATCCCAAGTTGCTTCAGTTGGTCGAAGACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGATACAAACATTGCGGTGCGCCTTaGCAAATCAGGGTGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPCWITSPKTGLYASRYKHCGAP*QIRVFL Trigger: CAAGAACACCCTGATTTGGCAAGGCGCACCGCAATG...TTTGTATCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127481.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCATGCTGTGCCTGTTTTaGTACTGCGAGCAGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLMLCLF*YCEQFF Trigger: GAAGAACTGCTCGCAGTACCAAAACAGGCACAGCAT...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCCAGTCTTCCAGGTGTTaGAATACAGATTTCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLQSSRC*NTDFHT Trigger: GGTGTGGAAATCTGTATTGCAACACCTGGAAGACTG...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | CTGGTAAGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGACAGTCTTCCAGGTGTTaGAATACAGATTTCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LVSPCWITSPKTGLYASRQSSRC*NTDFHT Trigger: GGTGTGGAAATCTGTATTGCAACACCTGGAAGACTG...TCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR TCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCGGTTTTGGACAGTTGTaGCCTCTAACTGTAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLGFGQL*PLTVIS Trigger: GGAAATTACAGTTAGAGGTCACAACTGTCCAAAACC...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR TCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTCCATATCCAATCCACTaGGAGCAACTGGCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPPYPIH*EQLASP Trigger: AGGGCTGGCCAGTTGCTCTCAGTGGATTGGATATGG...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTGACGATCGTCCTTCATaGCTCCTCTACCCCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPDDRPS*LLYPWN Trigger: GTTCCAGGGGTAGAGGAGGCATGAAGGACGATCGTC...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR CCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCTCTAGGAATGGCTGGTaGTTTATGTGTACAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLSRNGW*FMCTMA Trigger: TGCCATTGTACACATAAACCACCAGCCATTCCTAGA...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR CCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCCTCTCTAGGAATGGCTaGTGGTTTATGTGTACAATG | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLLSRNG*WFMCTM Trigger: CATTGTACACATAAACCACCAGCCATTCCTAGAGAG...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR CCA 90 bp | CTGGTAAGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGACTCTCTAGGAATGGCTaGTGGTTTATGTGTACAATG | + |
|
Preference number: 4 (lower is better) Translates to: LVSPCWITSPKTGLYASRLSRNG*WFMCTM Trigger: CATTGTACACATAAACCACCAGCCATTCCTAGAGAG...TCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTTGCCTCCTCTACCCCTaGAACGACCTGAACCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPCLLYP*NDLNLC Trigger: ACAGAGGTTCAGGTCGTTCCAGGGGTAGAGGAGGCA...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR CCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCCTGGTAAGTCCCTGTTaGATTACCAGTCCTAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLLVSPC*ITSPKT Trigger: AGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| 3UTR CAA 72 bp | TTTTCCCTGTCTCTAAAGGTATTAAATCCACCCCTTTaGCCTGCAGAGTATCTGTCACGACGATCGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSLSLKVLNPPL*PAEYLSRRSSF Trigger: GAAGGACGATCGTCGTGACAGATACTCTGCAGGCAAAAGGGGTGGATTTAATACCTTTAGAGACAGGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
||
| 3UTR CAA 72 bp | AACAGTTTATGGGGCAGAGGTGGTATGTTCTGCCCTTaGAAGATTACTGGCACACTTTCAGCTTTTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSLWGRGGMFCP*KITGTLSAFHL Trigger: GAGGTGAAAAGCTGAAAGTGTGCCAGTAATCTTCAAAGGGCAGAACATACCACCTCTGCCCCATAAACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR TCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTCAGTCACGTTCCTGCTaGCTCTTGTCACCATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPQSRSC*LLSPWM Trigger: CATCCATGGTGACAAGAGTCAGCAGGAACGTGACTG...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTTTGTGCGGTGCGCCTTaGCAAATCAGGGTGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPLCGAP*QIRVFL Trigger: CAAGAACACCCTGATTTGGCAAGGCGCACCGCACAA...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | TCAAAACTCTGGCCACACTGCTTGTCTTGCCAAGACCTTACAACTGCAGCTGCAAGTAAAGTTCTGCCTTaGAATCACATCCATGACATT | + |
|
Preference number: 4 (lower is better) Translates to: SKLWPHCLSCQDLTTAAASKVLP*NHIHDI Trigger: AATGTCATGGATGTGATTGCAAGGCAGAACTTTACT...TGCAGCTGCAGTTGTAAGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTCTGCCCTTTGAAGATTACTGGCACACTTTCAGCTTTTCACCTCTCTAATCAGTTCTCGAGTTGGTaGCAGCACCAAGCAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: MFCPLKITGTLSAFHLSNQFSSW*QHQANR Trigger: CCTATTTGCTTGGTGCTGGCACCAACTCGAGAACTG...ATTAGAGAGGTGAAAAGCTGAAAGTGTGCCAGTAATCTTCAAAGGGCAGAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCCAACTTGGGATTAATTaGTTGATTAGCTTCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLQLGIN*LISFPK Trigger: CTTCGGGAAGCTAATCAAGCAATTAATCCCAAGTTG...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR CCA 90 bp | ATGTTCTGCCCTTTGAAGATTACTGGCACACTTTCAGCTTTTCACCTCTCTAATCAAATCACGAATCTGTaGTCCTTTGGGAGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: MFCPLKITGTLSAFHLSNQITNL*SFGSTT Trigger: GGTGGTGCTCCCAAAGGACCACAGATTCGTGATTTG...ATTAGAGAGGTGAAAAGCTGAAAGTGTGCCAGTAATCTTCAAAGGGCAGAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR TCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCCATACATCCACAATCTaGAGAATGTTATGGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLHTSTI*RMLWFA Trigger: TGCAAACCATAACATTCTTCAGATTGTGGATGTATG...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTCAGTTCTCGAGTTGGTaGCAGCACCAAGCAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPQFSSW*QHQANR Trigger: CCTATTTGCTTGGTGCTGGCACCAACTCGAGAACTG...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCTGCACTCAGTTCCAGTaGACCAATATTGATATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLCTQFQ*TNIDMN Trigger: ATTCATATCAATATTGGTGCACTGGAACTGAGTGCA...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR CCA 90 bp | CTGGTAAGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGAAATTCTTCTCAAATTTaGGCAGCTCATCAAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSPCWITSPKTGLYASRNSSQI*AAHQDS Trigger: GGAATCTTGATGAGCTGCCCAAATTTGAGAAGAATT...TCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127481.8 ENSMUST00000133426.8 |
||
| CDS-3UTR CCA 90 bp | TACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCTTGCCAAGACCTATTCAGAACAGGTTTTaGACAGTTGTGACCTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YTHQKFKTLATLLVLPRPIQNRF*TVVTSN Trigger: GTTAGAGGTCACAACTGTCCAAAACCTGTTCTGAAT...AGGTCTTGGCAAGACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCGGTTTATGTGTACAATaGCAGGCAGCAAATAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLGLCVQ*QAANKI Trigger: TATCTTATTTGCTGCCTGCCATTGTACACATAAACC...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| CDS-3UTR CCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTCAAATCACGAATCTGTaGTCCTTTGGGAGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPQITNL*SFGSTT Trigger: GGTGGTGCTCCCAAAGGACCACAGATTCGTGATTTG...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| 3UTR CAA 72 bp | CTGAAACTCAAAGACCCACAGATCACAGTGAACAGTTaGAAACAATGCTGTACCATGGCAATCATGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKLKDPQITVNS*KQCCTMAIMQS Trigger: GCTTTGCATGATTGCCATGGTACAGCATTGTTTCAAACTGTTCACTGTGATCTGTGGGTCTTTGAGTTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| CDS-3UTR CCA 90 bp | ACATCTGAATGCTTCTGCGCAGTAGGGCCAATTAAAAGTTTCTCAGCAATCTCTTCTAGGAATGGCTGGTaGTTTATGTGTACAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSECFCAVGPIKSFSAISSRNGW*FMCTMA Trigger: TGCCATTGTACACATAAACCACCAGCCATTCCTAGA...AGAGATTGCTGAGAAACTTTTAATTGGCCCTACTGCGCAGAAGCATTCAGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCTTGTTCTTCTCAGATTaGTTTTCCCACACTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RTRNLQGNPALKTQCTQLLFFSD*FSHTLK Trigger: TTTTAGAGTGTGGGAAAACCAATCTGAGAAGAACAA...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTTGCCTGTTTTGGTACTaGGAGCAGTTCTTCCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPCLFWY*EQFFQF Trigger: GAATTGGAAGAACTGCTCGCAGTACCAAAACAGGCA...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTTGCGGTAGCAGGATATaGATATGCCTGTTGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPCGSRI*ICLLVH Trigger: ATGAACCAACAGGCATATGCATATCCTGCTACCGCA...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR TCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTTTGGGATTAATTGCTTaGTTAGCTTCCCGAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPLGLIA*LASRST Trigger: TGTGCTTCGGGAAGCTAATCAAGCAATTAATCCCAA...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR TCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTCTGTCTTCGACCAACTaGAGCAACTTGGGATTAATT | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPLSSTN*SNLGLI Trigger: AATTAATCCCAAGTTGCTTCAGTTGGTCGAAGACAG...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | CAGTTTGAAACAATGCTGTACCATGGCAATCATGCAAAGCATGGGACAGATGAATGCACTCAGTTCCAGTaGACCAATATTGATATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QFETMLYHGNHAKHGTDECTQFQ*TNIDMN Trigger: ATTCATATCAATATTGGTGCACTGGAACTGAGTGCA...TTCATCTGTCCCATGCTTTGCATGATTGCCATGGTACAGCATTGTTTCAAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTTCGACCAACTGAAGCAACTTGGGATTAATTGCTTGATTAGCTTCCCGTTGTTCTTCTCAGATTaGTTTTCCCACACTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVFDQLKQLGINCLISFPLFFSD*FSHTLK Trigger: TTTTAGAGTGTGGGAAAACCAATCTGAGAAGAACAA...CGGGAAGCTAATCAAGCAATTAATCCCAAGTTGCTTCAGTTGGTCGAAGACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTTTCCAAAGCTCCCATTaGTGTAATTTGCAGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPFQSSH*CNLQHC Trigger: ACAGTGCTGCAAATTACACCAATGGGAGCTTTGGAA...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTCCCATTGGTGTAATTTaGAGCACTGTAAACACCATT | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPPIGVI*STVNTI Trigger: AATGGTGTTTACAGTGCTGCAAATTACACCAATGGG...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTTTCCATATTGCTGAGTaGTATCATAACCGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPFHIAE*YHNRSG Trigger: ACCAGAACGGTTATGATAGCACTCAGCAATATGGAA...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR CCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTATTCAGAACAGGTTTTaGACAGTTGTGACCTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPIQNRF*TVVTSN Trigger: GTTAGAGGTCACAACTGTCCAAAACCTGTTCTGAAT...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTAGTAAAGTTCTGCCTTaGAATCACATCCATGACATT | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPSKVLP*NHIHDI Trigger: AATGTCATGGATGTGATTGCAAGGCAGAACTTTACT...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR GCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTTGTAAAGAAAGTGTATaGTGTGCCTGTTTTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPCKESV*CACFGT Trigger: AGTACCAAAACAGGCACAGCATACACTTTCTTTACA...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR CCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTAATTCTTCTCAAATTTaGGCAGCTCATCAAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPNSSQI*AAHQDS Trigger: GGAATCTTGATGAGCTGCCCAAATTTGAGAAGAATT...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR CCA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTTATGCATATGCCTGTTaGTTCATACCATTGTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: TFRPTYSHSETKLFAGDPYAYAC*FIPLCI Trigger: TATGCACAATGGTATGAACCAACAGGCATATGCATA...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR CAA 90 bp | CACCCCTTTTGCCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTGGCCAGCCCTGAGCTaGAATAGCAGTGGGTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HPFCLQSICHDDRPSCLLWPALS*NSSGFS Trigger: ACTGAACCCACTGCTATTCAAGCTCAGGGCTGGCCA...GAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGGCAAAAGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGAGTATCTGTCACGACGATCGTCCTTCATGCCTCCTCTACCCCTGGAAACATTGCGGTGCGCCTaGCCAAATCAGGGTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PAEYLSRRSSFMPPLPLETLRCA*PNQGVL Trigger: AAGAACACCCTGATTTGGCAAGGCGCACCGCAATGT...TTCCAGGGGTAGAGGAGGCATGAAGGACGATCGTCGTGACAGATACTCTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127481.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCCTTGTGCGGTGCGCCTaGCCAAATCAGGGTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RTRNLQGNPALKTQCTQLLVRCA*PNQGVL Trigger: AAGAACACCCTGATTTGGCAAGGCGCACCGCACAAG...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
||
| CDS-3UTR CAA 90 bp | CTGGTAAGTCCCTGTTGGATTACCAGTCCTAAAACTGGTCTGTATGCCAGCAGACTTGTGCGGTGCGCCTaGCCAAATCAGGGTGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LVSPCWITSPKTGLYASRLVRCA*PNQGVL Trigger: AAGAACACCCTGATTTGGCAAGGCGCACCGCACAAG...TCTGCTGGCATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| CDS-3UTR CAA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCTATGCTGTGCCTGTTTaGGTACTGCGAGCAGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: RTRNLQGNPALKTQCTQLYAVPV*VLRAVL Trigger: AAGAACTGCTCGCAGTACCAAAACAGGCACAGCATA...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| CDS-3UTR CAA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCTCAGTCTTCCAGGTGTaGCAATACAGATTTCCACAC | + |
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Preference number: 5 (lower is better) Translates to: RTRNLQGNPALKTQCTQLSVFQV*QYRFPH Trigger: GTGTGGAAATCTGTATTGCAACACCTGGAAGACTGA...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| CDS-3UTR CAA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCGAAGAATGTTATGGTTaGCACTCAGTTCCAGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: RTRNLQGNPALKTQCTQLEECYG*HSVPVH Trigger: GTGCACTGGAACTGAGTGCAAACCATAACATTCTTC...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| CDS-3UTR CAA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTTGGCCAGCCCTGAGCTaGAATAGCAGTGGGTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: TFRPTYSHSETKLFAGDPWPALS*NSSGFS Trigger: ACTGAACCCACTGCTATTCAAGCTCAGGGCTGGCCA...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| CDS-3UTR CAA 90 bp | GGTCCTTTGCATTACACTCATCAGAAGTTCAAAACTCTGGCCACACTGCTTGTCGAAGAATGTTATGGTTaGCACTCAGTTCCAGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: GPLHYTHQKFKTLATLLVEECYG*HSVPVH Trigger: GTGCACTGGAACTGAGTGCAAACCATAACATTCTTC...GACAAGCAGTGTGGCCAGAGTTTTGAACTTCTGATGAGTGTAATGCAAAGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| CDS-3UTR CAA 90 bp | AGGACTAGGAACCTACAAGGTAATCCTGCACTAAAGACACAGTGCACACAGCTCGATAAGGTCGCTCACTaGCTTTATGTTATTAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: RTRNLQGNPALKTQCTQLDKVAH*LYVIRC Trigger: ACACCTAATAACATAAAGCAAGTGAGCGACCTTATC...GAGCTGTGTGCACTGTGTCTTTAGTGCAGGATTACCTTGTAGGTTCCTAGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| CDS-3UTR CAA 90 bp | TTGAAGATTACTGGCACACTTTCAGCTTTTCACCTCTCTAATCGACTGGAAGCACAAGGACAAGGTAAGTaGTTCTTCTCAGATTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LKITGTLSAFHLSNRLEAQGQGK*FFSDWF Trigger: AAACCAATCTGAGAAGAACAACTTACCTTGTCCTTG...TGCTTCCAGTCGATTAGAGAGGTGAAAAGCTGAAAGTGTGCCAGTAATCTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| CDS-3UTR CAA 90 bp | CAGTTTGAAACAATGCTGTACCATGGCAATCATGCAAAGCATGGGACAGATGAAGGAGCTTTTCCATGTTaGAATTCATTTAGAACCCAG | + |
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Preference number: 5 (lower is better) Translates to: QFETMLYHGNHAKHGTDEGAFPC*NSFRTQ Trigger: CTGGGTTCTAAATGAATTCAAACATGGAAAAGCTCC...TTCATCTGTCCCATGCTTTGCATGATTGCCATGGTACAGCATTGTTTCAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133426.8 |
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| CDS-3UTR CAA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTCTTGGGATTAATTGCTaGATTAGCTTCCCGAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: TFRPTYSHSETKLFAGDPLGINC*ISFPKH Trigger: GTGCTTCGGGAAGCTAATCAAGCAATTAATCCCAAG...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| CDS-3UTR CAA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTTCCCATTGGTGTAATTaGCAGCACTGTAAACACCAT | + |
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Preference number: 5 (lower is better) Translates to: TFRPTYSHSETKLFAGDPSHWCN*QHCKHH Trigger: ATGGTGTTTACAGTGCTGCAAATTACACCAATGGGA...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| CDS-3UTR CAA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTCAAGGACAAGGTAAGTaGTTCTTCTCAGATTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: TFRPTYSHSETKLFAGDPQGQGK*FFSDWF Trigger: AAACCAATCTGAGAAGAACAACTTACCTTGTCCTTG...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| CDS-3UTR CAA 90 bp | ACATTTAGACCTACTTATAGCCATTCTGAAACAAAGCTGTTTGCTGGTGATCCTGGAGCTTTTCCATGTTaGAATTCATTTAGAACCCAG | + |
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Preference number: 5 (lower is better) Translates to: TFRPTYSHSETKLFAGDPGAFPC*NSFRTQ Trigger: CTGGGTTCTAAATGAATTCAAACATGGAAAAGCTCC...AGGATCACCAGCAAACAGCTTTGTTTCAGAATGGCTATAAGTAGGTCTAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021062.12 |
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| CDS GCA 90 bp | TTCGACATCATGACATACATCCACAATCTGAAGAATGTTATGGTTTaGACTCAGTTCCAGTGCACCAATATTGATATGAATATAGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: FDIMTYIHNLKNVMV*TQFQCTNIDMNIVF Trigger: AAAGACTATATTCATATCAATATTGGTGCACTGGAACTGAGTGCAAACCATAACATTCTTCAGATTGTGGATGTATGTCATGATGTCGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021062.12 ENSMUST00000133426.8 |
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| CDS TCA 72 bp | TGTTTGAATTCATTTAGAACCCAGTCACGTTCCTGCTaGCTCTTGTCACCATGGATGCCCATGGCAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: CLNSFRTQSRSC*LLSPWMPMAGH Trigger: GTGGCCTGCCATGGGCATCCATGGTGACAAGAGTCAGCAGGAACGTGACTGGGTTCTAAATGAATTCAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021062.12 ENSMUST00000133426.8 |
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| CDS CAA 90 bp | TCCAACCATATCCAATCCACTGAGAGCAACTGGCCAGCCCTGAGCTaGAATAGCAGTGGGTTCAGTAAAGTTCTGCCTTGCAATCACATC | + |
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Preference number: 6 (lower is better) Translates to: SNHIQSTESNWPALS*NSSGFSKVLPCNHI Trigger: GATGTGATTGCAAGGCAGAACTTTACTGAACCCACTGCTATTCAAGCTCAGGGCTGGCCAGTTGCTCTCAGTGGATTGGATATGGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021062.12 ENSMUST00000123339.2 ENSMUST00000129585.8 ENSMUST00000133426.8 |
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| CDS GCA 72 bp | AGCTTGAATAGCAGTGGGTTCAGTAAAGTTCTGCCTTaGAATCACATCCATGACATTCGCAGGAAAGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SLNSSGFSKVLP*NHIHDIRRKVC Trigger: GCAAACTTTCCTGCGAATGTCATGGATGTGATTGCAAGGCAGAACTTTACTGAACCCACTGCTATTCAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021062.12 ENSMUST00000123339.2 ENSMUST00000129585.8 ENSMUST00000133426.8 |
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| CDS GCA 72 bp | TCTTCTGTATGTATCTACCTCTTGTGCGGTGCGCCTTaGCAAATCAGGGTGTTCTTGATAAAAATTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSVCIYLLCGAP*QIRVFLIKILL Trigger: GAGAAGAATTTTTATCAAGAACACCCTGATTTGGCAAGGCGCACCGCACAAGAGGTAGATACATACAGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021062.12 ENSMUST00000123339.2 ENSMUST00000129585.8 ENSMUST00000133426.8 |
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| CDS CAA 72 bp | TTCTTCTGTATGTATCTACCTCTTGTGCGGTGCGCCTaGCCAAATCAGGGTGTTCTTGATAAAAATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FFCMYLPLVRCA*PNQGVLDKNSS Trigger: AGAAGAATTTTTATCAAGAACACCCTGATTTGGCAAGGCGCACCGCACAAGAGGTAGATACATACAGAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021062.12 ENSMUST00000123339.2 ENSMUST00000129585.8 ENSMUST00000133426.8 |
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| CDS CCA 72 bp | CTTCATCAAGGACAAGGTAAGTTGTTCTTCTCAGATTaGTTTTCCCACACTCTAAAAAGTCAATCAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LHQGQGKLFFSD*FSHTLKSQSVF Trigger: GAAGACTGATTGACTTTTTAGAGTGTGGGAAAACCAATCTGAGAAGAACAACTTACCTTGTCCTTGATGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021062.12 ENSMUST00000133426.8 |
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| CDS GCA 72 bp | AATCTGAAGAATGTTATGGTTTGCACTCAGTTCCAGTaGACCAATATTGATATGAATATAGTCTTTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: NLKNVMVCTQFQ*TNIDMNIVFQE Trigger: TTCCTGAAAGACTATATTCATATCAATATTGGTGCACTGGAACTGAGTGCAAACCATAACATTCTTCAGATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021062.12 ENSMUST00000133426.8 |
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