Pregenerated sensors for DDX47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030204Ensembl transcript IDs: ENSMUST00000032326.11, ENSMUST00000130851.8, ENSMUST00000154558.3, ENSMUST00000155022.3, ENSMUST00000204646.3, ENSMUST00000205055.3, ENSMUST00000205244.3
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATaGAGAGCACACGGCACTTGTGTCACAGGTGAGGAATGCAAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: IRQAVACRWEGRGAA*RAHGTCVTGEECKL Trigger: CAGCTTGCATTCCTCACCTGTGACACAAGTGCCGTGTGCTCTTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| 3UTR TCA 90 bp | CTCCGTGCTCCCTTAACTCCTGCAAGGCAGCAAACACGATGTGACTaGCTGGAGTTAACAGCAACCCCCGTGCCCCATCCTCAGGTCAGA | + |
|
Preference number: 1 (lower is better) Translates to: LRAPLTPARQQTRCD*LELTATPVPHPQVR Trigger: TCTGACCTGAGGATGGGGCACGGGGGTTGCTGTTAACTCCAGTCAGTCACATCGTGTTTGCTGCCTTGCAGGAGTTAAGGGAGCACGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 90 bp | TCGATGCGCTGGAAGAGTTCCACGTCATACCTGAGGAAGGACAGTTaGCCTGGCTTTGCTGAGCCGCTAATGTGGCACCTTCCACTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: SMRWKSSTSYLRKDS*PGFAEPLMWHLPLA Trigger: AGCCAGTGGAAGGTGCCACATTAGCGGCTCAGCAAAGCCAGGCCAACTGTCCTTCCTCAGGTATGACGTGGAACTCTTCCAGCGCATCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 90 bp | AGGCAGAGGTGCAGCATGAAGAGCACACGGCACTTGTGTCACAGGTaGGGAATGCAAGCTGAAGAGCGGCCAGTCCTGTGTCAACACTGT | + |
|
Preference number: 1 (lower is better) Translates to: RQRCSMKSTRHLCHR*GMQAEERPVLCQHC Trigger: ACAGTGTTGACACAGGACTGGCCGCTCTTCAGCTTGCATTCCTCACCTGTGACACAAGTGCCGTGTGCTCTTCATGCTGCACCTCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| 3UTR TCA 90 bp | ACATGGCAGTTCATAACTGTCTCTAACTCCGGGCCCTGGGGAATCTaGCTTCTTCTAGCCTCTGCAGGCACAAGACATTCATGTGGTACA | + |
|
Preference number: 1 (lower is better) Translates to: TWQFITVSNSGPWGI*LLLASAGTRHSCGT Trigger: TGTACCACATGAATGTCTTGTGCCTGCAGAGGCTAGAAGAAGTCAGATTCCCCAGGGCCCGGAGTTAGAGACAGTTATGAACTGCCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 90 bp | AAGCACCAAAGTGAAATGAGACTGGCTGGCCCAGATGTGGTCACATaGCCTGCTCTGGCTTTTCTAGGGGACAATCAGGCATTCTGTATG | + |
|
Preference number: 1 (lower is better) Translates to: KHQSEMRLAGPDVVT*PALAFLGDNQAFCM Trigger: CATACAGAATGCCTGATTGTCCCCTAGAAAAGCCAGAGCAGGTCATGTGACCACATCTGGGCCAGCCAGTCTCATTTCACTTTGGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR GCA 90 bp | TTAAAATGGGCCTGGGCAGATGGCTTGCTGCTTAAGAGCACTGACTaGTCTTCTAAAGACCATGGTTCAATTCCCGTCACCCACATGGCA | + |
|
Preference number: 1 (lower is better) Translates to: LKWAWADGLLLKSTD*SSKDHGSIPVTHMA Trigger: TGCCATGTGGGTGACGGGAATTGAACCATGGTCTTTAGAAGAGCAGTCAGTGCTCTTAAGCAGCAAGCCATCTGCCCAGGCCCATTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 90 bp | GCTACTGCTACTACCCCTAGTAGTACCCTAGACTCGTGGTTCACATaGGCTTGCCTGGTGTTCAGAACACACAGAAGGTATTCAAGGTAT | + |
|
Preference number: 1 (lower is better) Translates to: ATATTPSSTLDSWFT*ACLVFRTHRRYSRY Trigger: ATACCTTGAATACCTTCTGTGTGTTCTGAACACCAGGCAAGCTCATGTGAACCACGAGTCTAGGGTACTACTAGGGGTAGTAGCAGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 90 bp | ATGTGGCACCTTCCACTGGCTAGTGATCCTTTGTGCCCGGACAACTaGGAAATTACCCATGGTATGGTTTACTCACAGAAAACACTAGGT | + |
|
Preference number: 1 (lower is better) Translates to: MWHLPLASDPLCPDN*EITHGMVYSQKTLG Trigger: ACCTAGTGTTTTCTGTGAGTAAACCATACCATGGGTAATTTCCCAGTTGTCCGGGCACAAAGGATCACTAGCCAGTGGAAGGTGCCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 90 bp | TTTGTGAAATTTTTCCCCAGGCACAGATCTGGCCCAAACTCTCACTaGTCCCGACTCAGCTTCAGAAGTGCTAGGATCATGGTATATGTC | + |
|
Preference number: 1 (lower is better) Translates to: FVKFFPRHRSGPNSH*SRLSFRSARIMVYV Trigger: GACATATACCATGATCCTAGCACTTCTGAAGCTGAGTCGGGATCAGTGAGAGTTTGGGCCAGATCTGTGCCTGGGGAAAAATTTCACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 90 bp | ACCATTGTAAACCATGCTACAGCATGCGATATAGCCATCAAAAAGTaGTTACATGTGCTGGTCATGGTGGTGCACAGCTGTAATCCCAGC | + |
|
Preference number: 1 (lower is better) Translates to: TIVNHATACDIAIKK*LHVLVMVVHSCNPS Trigger: GCTGGGATTACAGCTGTGCACCACCATGACCAGCACATGTAATCACTTTTTGATGGCTATATCGCATGCTGTAGCATGGTTTACAATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 90 bp | CAAACTCTCACTGATCCCGACTCAGCTTCAGAAGTGCTAGGATCATaGTATATGTCATTACAGGACCATGGTATATGTCATTACAGGACC | + |
|
Preference number: 1 (lower is better) Translates to: QTLTDPDSASEVLGS*YMSLQDHGICHYRT Trigger: GGTCCTGTAATGACATATACCATGGTCCTGTAATGACATATACCATGATCCTAGCACTTCTGAAGCTGAGTCGGGATCAGTGAGAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 90 bp | CCACTATACTTAACTACAGGTAGCACCTGTGTGCTTGTGCATGCCTaGCTAACTTTCTTCCCCACCACAGATAGCATGTTTATAAACAAA | + |
|
Preference number: 1 (lower is better) Translates to: PLYLTTGSTCVLVHA*LTFFPTTDSMFINK Trigger: TTTGTTTATAAACATGCTATCTGTGGTGGGGAAGAAAGTTAGCCAGGCATGCACAAGCACACAGGTGCTACCTGTAGTTAAGTATAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 90 bp | TATACATGTATGAAACTGGCAAAGAGTAAGCTTTTAAAATGGGCCTaGGCAGATGGCTTGCTGCTTAAGAGCACTGACTGCTCTTCTAAA | + |
|
Preference number: 1 (lower is better) Translates to: YTCMKLAKSKLLKWA*ADGLLLKSTDCSSK Trigger: TTTAGAAGAGCAGTCAGTGCTCTTAAGCAGCAAGCCATCTGCCCAGGCCCATTTTAAAAGCTTACTCTTTGCCAGTTTCATACATGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 90 bp | GGTATATGTCATTATAGGACCATGGTATATGTCATTATAGGACCATaGTATATGCCACTATACTTAACTACAGGTAGCACCTGTGTGCTT | + |
|
Preference number: 1 (lower is better) Translates to: GICHYRTMVYVIIGP*YMPLYLTTGSTCVL Trigger: AAGCACACAGGTGCTACCTGTAGTTAAGTATAGTGGCATATACCATGGTCCTATAATGACATATACCATGGTCCTATAATGACATATACC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 90 bp | GGACAATCAGGCATTCTGTATGAATTCTACTGTATGTGTACTCTCTaGTCAATCTCACTTCTAGAAGTTTCCTTTAAGGAAATAAGAGGC | + |
|
Preference number: 1 (lower is better) Translates to: GQSGILYEFYCMCTL*SISLLEVSFKEIRG Trigger: GCCTCTTATTTCCTTAAAGGAAACTTCTAGAAGTGAGATTGACCAGAGAGTACACATACAGTAGAATTCATACAGAATGCCTGATTGTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 90 bp | GGTATATGTCATTACAGGACCATGGTATATGTCATTATAGGACCATaGTATATGTCATTACAGGACCATGGTATATGTCATTATAGGACC | + |
|
Preference number: 1 (lower is better) Translates to: GICHYRTMVYVIIGP*YMSLQDHGICHYRT Trigger: GGTCCTATAATGACATATACCATGGTCCTGTAATGACATATACCATGGTCCTATAATGACATATACCATGGTCCTGTAATGACATATACC 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGTCCCAGCTGGCCGAGTaGTCTCTGGACAGAATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: ALHPPGRGLQVGRQRCSMSQLAE*SLDRIS Trigger: TGAGATTCTGTCCAGAGACCACTCGGCCAGCTGGGA...CATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGCCATCCGCCAGGCCGTaGCTTGCAGGTGGGAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SHCNDTAIPRNVLPAGRVPSARP*LAGGKA Trigger: TGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGG...CACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGGTTGTCCCATTGCAATaGCACTGCAATCCCGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ALHPPGRGLQVGRQRCSMVVPLQ*HCNPEE Trigger: TTCCTCGGGATTGCAGTGTCATTGCAATGGGACAAC...CATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGCACTTGTGTCACAGGTaGGGAATGCAAGCTGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: ALHPPGRGLQVGRQRCSMHLCHR*GMQAEE Trigger: CTCTTCAGCTTGCATTCCTCACCTGTGACACAAGTG...CATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAATGGCCGAGTGGTCTCTaGACAGAATCTCACAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SPSARPWLAGGKAEVQHEWPSGL*TESHSW Trigger: CCAGCTGTGAGATTCTGTCCAGAGACCACTCGGCCA...TTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| 3UTR-3UTR TCA 90 bp | GCCTCATTCACACGTTCCGTGAGCATCATGACCTCCTCATCCTGCGTCGGAAAGGGGCCCTGGGGAATCTaGCTTCTTCTAGCCTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ASFTRSVSIMTSSSCVGKGPWGI*LLLASA Trigger: TGCAGAGGCTAGAAGAAGTCAGATTCCCCAGGGCCC...CTTTCCGACGCAGGATGAGGAGGTCATGATGCTCACGGAACGTGTGAATGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGACCAAAGCACCAAAGTaGAATGAGACTGGCTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: SHCNDTAIPRNVLPAGRVTKAPK*NETGWP Trigger: GGGCCAGCCAGTCTCATTTCACTTTGGTGCTTTGGT...CACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR GCA 90 bp | CCAGGAAGGACACAGCATTCCAAGGTTTCCTCTAGAATCTTCTCTCATGCTGCTGTCACAGGTGAGGAATaGAAGCTGAAGAGCGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PGRTQHSKVSSRIFSHAAVTGEE*KLKSGQ Trigger: CTGGCCGCTCTTCAGCTTGCATTCCTCACCTGTGAC...AGCAGCATGAGAGAAGATTCTAGAGGAAACCTTGGAATGCTGTGTCCTTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGAAGGACACAGCATTCCAAGGTTTCCTCTAGAATCTTCTCTCATGCTGCTTCCCAGCTGGCCGAGTaGTCTCTGGACAGAATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PGRTQHSKVSSRIFSHAASQLAE*SLDRIS Trigger: TGAGATTCTGTCCAGAGACCACTCGGCCAGCTGGGA...AGCAGCATGAGAGAAGATTCTAGAGGAAACCTTGGAATGCTGTGTCCTTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGATAGCCATCAAAAAGTaGTTACATGTGCTGGTCATG | + |
|
Preference number: 2 (lower is better) Translates to: SHCNDTAIPRNVLPAGRVIAIKK*LHVLVM Trigger: CATGACCAGCACATGTAATCACTTTTTGATGGCTAT...CACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTAAGAATCAACTCCAAATGAACAGAAACGCTGACCTCATACAGAGACCAAAGGCACCAGGCAGAAGGTaGAGTCTGTTGCTCAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: AKNQLQMNRNADLIQRPKAPGRR*SLLLSP Trigger: GGGACTGAGCAACAGACTGCACCTTCTGCCTGGTGC...CTTTGGTCTCTGTATGAGGTCAGCGTTTCTGTTCATTTGGAGTTGATTCTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTATCCACCACACTTCAGAGTTCTCTCCAGGAAGGACACAGCATTCCAAGGTTCCCGTCACCCACATaGCAGTTCATAACTGTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: EVSTTLQSSLQEGHSIPRFPSPT*QFITVS Trigger: AGAGACAGTTATGAACTGCCATGTGGGTGACGGGAA...CCTTGGAATGCTGTGTCCTTCCTGGAGAGAACTCTGAAGTGTGGTGGATACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGAAGGACACAGCATTCCAAGGTTTCCTCTAGAATCTTCTCTCATGCTGCTAAGTGCTCGATGCGCTaGAAGAGTTCCACGTCATAC | + |
|
Preference number: 2 (lower is better) Translates to: PGRTQHSKVSSRIFSHAAKCSMR*KSSTSY Trigger: GTATGACGTGGAACTCTTCCAGCGCATCGAGCACTT...AGCAGCATGAGAGAAGATTCTAGAGGAAACCTTGGAATGCTGTGTCCTTCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGAAGGACACAGCATTCCAAGGTTTCCTCTAGAATCTTCTCTCATGCTGCTACCCAGATTCAGTGGTaGATTTCCCATAAGCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PGRTQHSKVSSRIFSHAATQIQW*ISHKPS Trigger: TGAGGGCTTATGGGAAATTCACCACTGAATCTGGGT...AGCAGCATGAGAGAAGATTCTAGAGGAAACCTTGGAATGCTGTGTCCTTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGGTCATTATAGGATCATaGTATATGTCATTACAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SHCNDTAIPRNVLPAGRVVIIGS*YMSLQD Trigger: GTCCTGTAATGACATATACCATGATCCTATAATGAC...CACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTAAGAATCAACTCCAAATGAACAGAAACGCTGACCTCATACAGAGACCAAAGTCTGTACAACAGCACTaGACCAGGCAGAAGGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: AKNQLQMNRNADLIQRPKSVQQH*TRQKVQ Trigger: CTGCACCTTCTGCCTGGTGCAGTGCTGTTGTACAGA...CTTTGGTCTCTGTATGAGGTCAGCGTTTCTGTTCATTTGGAGTTGATTCTTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTCAGACACAGTTATTCTAGCCCATCGGAATTAAGGGAAACAAAGGTCACCGTTGTCCCATTGCAATaGCACTGCAATCCCGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KVRHSYSSPSELRETKVTVVPLQ*HCNPEE Trigger: TTCCTCGGGATTGCAGTGTCATTGCAATGGGACAAC...GGTGACCTTTGTTTCCCTTAATTCCGATGGGCTAGAATAACTGTGTCTGACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | AGACAGGCAGCTTCTTTCCAATCAAGTGCTCGATGCGCTGGAAGAGTTCCACGTCATTGTGTTTCTGTATaGCACAACGTGATGTATGAA | + |
|
Preference number: 2 (lower is better) Translates to: RQAASFQSSARCAGRVPRHCVSV*HNVMYE Trigger: TTCATACATCACGTTGTGCCATACAGAAACACAATG...ACGTGGAACTCTTCCAGCGCATCGAGCACTTGATTGGAAAGAAGCTGCCTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGCATTCTGTATGAATTCTACTGTATGTGTACTCTCTGGTCAATCTCACTTTGGTTCTCCAGAGCCTaGTTCCCCTCTTCAGCTACC | + |
|
Preference number: 2 (lower is better) Translates to: SGILYEFYCMCTLWSISLWFSRA*FPSSAT Trigger: GGTAGCTGAAGAGGGGAACCAGGCTCTGGAGAACCA...AAGTGAGATTGACCAGAGAGTACACATACAGTAGAATTCATACAGAATGCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTAAGAATCAACTCCAAATGAACAGAAACGCTGACCTCATACAGAGACCAAAGCTTTTAAAATGGGCCTaGGCAGATGGCTTGCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: AKNQLQMNRNADLIQRPKLLKWA*ADGLLL Trigger: AAGCAGCAAGCCATCTGCCCAGGCCCATTTTAAAAG...CTTTGGTCTCTGTATGAGGTCAGCGTTTCTGTTCATTTGGAGTTGATTCTTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTAAGAATCAACTCCAAATGAACAGAAACGCTGACCTCATACAGAGACCAAAGTTCTTTCCAATCAAGTaGTCGATGCGCTGGAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: AKNQLQMNRNADLIQRPKFFPIK*SMRWKS Trigger: ACTCTTCCAGCGCATCGAGCACTTGATTGGAAAGAA...CTTTGGTCTCTGTATGAGGTCAGCGTTTCTGTTCATTTGGAGTTGATTCTTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGTGTACTCTCTGGTCAATCTCACTTCTAGAAGTTTCCTTTAAGGAAATAGTGCTTGTGCATGCCTaGCTAACTTTCTTCCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: CMCTLWSISLLEVSFKEIVLVHA*LTFFPT Trigger: GGTGGGGAAGAAAGTTAGCCAGGCATGCACAAGCAC...TATTTCCTTAAAGGAAACTTCTAGAAGTGAGATTGACCAGAGAGTACACATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTATGTGTACTCTCTGGTCAATCTCACTTCTAGAAGTTTCCTTTAAGGAAATACAATCAAGTGCTCGATaGGCTGGAAGAGTTCCACGT | + |
|
Preference number: 2 (lower is better) Translates to: CMCTLWSISLLEVSFKEIQSSAR*AGRVPR Trigger: ACGTGGAACTCTTCCAGCGCATCGAGCACTTGATTG...TATTTCCTTAAAGGAAACTTCTAGAAGTGAGATTGACCAGAGAGTACACATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGCATTCTGTATGAATTCTACTGTATGTGTACTCTCTGGTCAATCTCACTTGGGAGAGGGGATATTTaGGGAAATATGATCAAGATA | + |
|
Preference number: 2 (lower is better) Translates to: SGILYEFYCMCTLWSISLGRGDI*GNMIKI Trigger: TATCTTGATCATATTTCCCCAAATATCCCCTCTCCC...AAGTGAGATTGACCAGAGAGTACACATACAGTAGAATTCATACAGAATGCCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | GGAAATAAGAGGCTACTAGGATATTTATTAAGCACAGCCCTAGTTAAAGTGGAGGTCATTACAGGACCATaGTATATGTCATTACAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GNKRLLGYLLSTALVKVEVITGP*YMSLQD Trigger: GTCCTGTAATGACATATACCATGGTCCTGTAATGAC...CTCCACTTTAACTAGGGCTGTGCTTAATAAATATCCTAGTAGCCTCTTATTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGTGTACTCTCTGGTCAATCTCACTTCTAGAAGTTTCCTTTAAGGAAATACACAAGACATTCATGTaGTACACACACAGGCATACA | + |
|
Preference number: 2 (lower is better) Translates to: CMCTLWSISLLEVSFKEIHKTFM*YTHRHT Trigger: TGTATGCCTGTGTGTGTACCACATGAATGTCTTGTG...TATTTCCTTAAAGGAAACTTCTAGAAGTGAGATTGACCAGAGAGTACACATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | CTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTaGTCTCTGGACAGAATCTCACAGCTGGCGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQSRGTFSQLAE*SLDRISQLASR Trigger: CCTGCTCGCCAGCTGTGAGATTCTGTCCAGAGACCACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| 3UTR TCA 72 bp | GCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATaGAGAGCACACGGCACTTGTGTCACAGGTGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AVACRWEGRGAA*RAHGTCVTGEE Trigger: TTCCTCACCTGTGACACAAGTGCCGTGTGCTCTTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | GTTAACTACAGTCAGCGCTCTCCATCCGCCAGGCCGTaGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: VNYSQRSPSARP*LAGGKAEVQHE Trigger: TTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGAGCGCTGACTGTAGTTAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| 3UTR TCA 72 bp | AGTGCTCGATGCGCTGGAAGAGTTCCACGTCATACCTaGGGAAGGACAGTTGGCCTGGCTTTGCTGAGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: SARCAGRVPRHT*GRTVGLALLSR Trigger: GCGGCTCAGCAAAGCCAGGCCAACTGTCCTTCCTCAGGTATGACGTGGAACTCTTCCAGCGCATCGAGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 72 bp | CCCTTAACTCCTGCAAGGCAGCAAACACGATGTGACTaGCTGGAGTTAACAGCAACCCCCGTGCCCCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: PLTPARQQTRCD*LELTATPVPHP Trigger: AGGATGGGGCACGGGGGTTGCTGTTAACTCCAGTCAGTCACATCGTGTTTGCTGCCTTGCAGGAGTTAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 72 bp | TGCTCCCTTAACTCCTGCAAGGCAGCAAACACGATGTaGCTGACTGGAGTTAACAGCAACCCCCGTGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CSLNSCKAANTM*LTGVNSNPRAP Trigger: TGGGGCACGGGGGTTGCTGTTAACTCCAGTCAGTCACATCGTGTTTGCTGCCTTGCAGGAGTTAAGGGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | TGGAAGAGTTCCACGTCATACCTGAGGAAGGACAGTTaGCCTGGCTTTGCTGAGCCGCTAATGTGGCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: WKSSTSYLRKDS*PGFAEPLMWHL Trigger: AAGGTGCCACATTAGCGGCTCAGCAAAGCCAGGCCAACTGTCCTTCCTCAGGTATGACGTGGAACTCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 72 bp | CCCAGCACTTGGGAGGCTGAAGCAAGAGGCTGGATATaGATTCAAGGGCAACCTGGACTACACAGTAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PSTWEAEARGWI*IQGQPGLHSKC Trigger: GCACTTACTGTGTAGTCCAGGTTGCCCTTGAATTCATATCCAGCCTCTTGCTTCAGCCTCCCAAGTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 72 bp | AGTGAAATGAGACTGGCTGGCCCAGATGTGGTCACATaGCCTGCTCTGGCTTTTCTAGGGGACAATCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SEMRLAGPDVVT*PALAFLGDNQA Trigger: TGCCTGATTGTCCCCTAGAAAAGCCAGAGCAGGTCATGTGACCACATCTGGGCCAGCCAGTCTCATTTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR GCA 72 bp | GCCTGGGCAGATGGCTTGCTGCTTAAGAGCACTGACTaGTCTTCTAAAGACCATGGTTCAATTCCCGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: AWADGLLLKSTD*SSKDHGSIPVT Trigger: GGTGACGGGAATTGAACCATGGTCTTTAGAAGAGCAGTCAGTGCTCTTAAGCAGCAAGCCATCTGCCCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR GCA 72 bp | AATGAGACTGGCTGGCCCAGATGTGGTCACATGACCTaGTCTGGCTTTTCTAGGGGACAATCAGGCATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NETGWPRCGHMT*SGFSRGQSGIL Trigger: CAGAATGCCTGATTGTCCCCTAGAAAAGCCAGAGCAGGTCATGTGACCACATCTGGGCCAGCCAGTCTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 72 bp | TTTTTCCCCAGGCACAGATCTGGCCCAAACTCTCACTaGTCCCGACTCAGCTTCAGAAGTGCTAGGATCATG | + |
|
Preference number: 3 (lower is better) Translates to: FFPRHRSGPNSH*SRLSFRSARIM Trigger: CATGATCCTAGCACTTCTGAAGCTGAGTCGGGATCAGTGAGAGTTTGGGCCAGATCTGTGCCTGGGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR GCA 72 bp | TTCACACGTTCCGTGAGCATCATGACCTCCTCATCCTaGGTCGGAAAGACAGGCAGCTTCTTTCCAATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: FTRSVSIMTSSS*VGKTGSFFPIK Trigger: CTTGATTGGAAAGAAGCTGCCTGTCTTTCCGACGCAGGATGAGGAGGTCATGATGCTCACGGAACGTGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | CTTCTAAAGACCATGGTTCAATTCCCGTCACCCACATaGCAGTTCATAACTGTCTCTAACTCCGGGCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLKTMVQFPSPT*QFITVSNSGPW Trigger: CCAGGGCCCGGAGTTAGAGACAGTTATGAACTGCCATGTGGGTGACGGGAATTGAACCATGGTCTTTAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | ACAGGCAGCTTCTTTCCAATCAAGTGCTCGATGCGCTaGAAGAGTTCCACGTCATACCTGAGGAAGGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: TGSFFPIKCSMR*KSSTSYLRKDS Trigger: ACTGTCCTTCCTCAGGTATGACGTGGAACTCTTCCAGCGCATCGAGCACTTGATTGGAAAGAAGCTGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 72 bp | TTCATAACTGTCTCTAACTCCGGGCCCTGGGGAATCTaGCTTCTTCTAGCCTCTGCAGGCACAAGACATTCA | + |
|
Preference number: 3 (lower is better) Translates to: FITVSNSGPWGI*LLLASAGTRHS Trigger: TGAATGTCTTGTGCCTGCAGAGGCTAGAAGAAGTCAGATTCCCCAGGGCCCGGAGTTAGAGACAGTTATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR GCA 72 bp | CTAATGTGGCACCTTCCACTGGCTAGTGATCCTTTGTaGCCGGACAACTGGGAAATTACCCATGGTATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LMWHLPLASDPL*PDNWEITHGMV Trigger: AACCATACCATGGGTAATTTCCCAGTTGTCCGGGCACAAAGGATCACTAGCCAGTGGAAGGTGCCACATTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAAATAAGAGGCTACTAGGATATTTATTAAGCACAGCCCTAGTTAAAGTGGAGGCCTGGGCAGATGGCTaGCTGCTTAAGAGCACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GNKRLLGYLLSTALVKVEAWADG*LLKSTD Trigger: GTCAGTGCTCTTAAGCAGCAAGCCATCTGCCCAGGC...CTCCACTTTAACTAGGGCTGTGCTTAATAAATATCCTAGTAGCCTCTTATTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | TTAACTACAGGTAGCACCTGTGTGCTTGTGCATGCCTaGCTAACTTTCTTCCCCACCACAGATAGCATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTTGSTCVLVHA*LTFFPTTDSMF Trigger: AAACATGCTATCTGTGGTGGGGAAGAAAGTTAGCCAGGCATGCACAAGCACACAGGTGCTACCTGTAGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | TCTATACTTTGTGAAATTTTTCCCCAGGCACAGATCTaGCCCAAACTCTCACTGATCCCGACTCAGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SILCEIFPQAQI*PKLSLIPTQLQ Trigger: CTGAAGCTGAGTCGGGATCAGTGAGAGTTTGGGCCAGATCTGTGCCTGGGGAAAAATTTCACAAAGTATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 72 bp | AACCATGCTACAGCATGCGATATAGCCATCAAAAAGTaGTTACATGTGCTGGTCATGGTGGTGCACAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: NHATACDIAIKK*LHVLVMVVHSC Trigger: ACAGCTGTGCACCACCATGACCAGCACATGTAATCACTTTTTGATGGCTATATCGCATGCTGTAGCATGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | TTCTCCAACAAGCAGCAGCGCCATTGTGTTTCTGTATaGCACAACGTGATGTATGAAAACCAGGTAACCACA | + |
|
Preference number: 3 (lower is better) Translates to: FSNKQQRHCVSV*HNVMYENQVTT Trigger: TGTGGTTACCTGGTTTTCATACATCACGTTGTGCCATACAGAAACACAATGGCGCTGCTGCTTGTTGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | ACATGTATGAAACTGGCAAAGAGTAAGCTTTTAAAATaGGCCTGGGCAGATGGCTTGCTGCTTAAGAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: TCMKLAKSKLLK*AWADGLLLKST Trigger: AGTGCTCTTAAGCAGCAAGCCATCTGCCCAGGCCCATTTTAAAAGCTTACTCTTTGCCAGTTTCATACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTCAGAACACACAGAAGGTATTCAAGGTATTCAAGGGAGGGACTGGTTCTGATAAGCCCTCAACTTTaGCTAGCTCATTTCAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: VFRTHRRYSRYSREGLVLISPQL*LAHFNS Trigger: AGAGTTGAAATGAGCTAGCAAAAGTTGAGGGCTTAT...CAGAACCAGTCCCTCCCTTGAATACCTTGAATACCTTCTGTGTGTTCTGAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR TCA 72 bp | CAGTTCTTACTATGCCTTAAAAACCAAAAATTAGCTTaGTGCTCTCAATGGTTCTCCAGAGCCTGGTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QFLLCLKNQKLA*CSQWFSRAWFP Trigger: GGGGAACCAGGCTCTGGAGAACCATTGAGAGCATCAAGCTAATTTTTGGTTTTTAAGGCATAGTAAGAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | ACTGATCCCGACTCAGCTTCAGAAGTGCTAGGATCATaGTATATGTCATTACAGGACCATGGTATATGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TDPDSASEVLGS*YMSLQDHGICH Trigger: ATGACATATACCATGGTCCTGTAATGACATATACCATGATCCTAGCACTTCTGAAGCTGAGTCGGGATCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | CATTATAGGACCATGGTATATGTCATTATAGGACCATaGTATATGCCACTATACTTAACTACAGGTAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: HYRTMVYVIIGP*YMPLYLTTGST Trigger: GGTGCTACCTGTAGTTAAGTATAGTGGCATATACCATGGTCCTATAATGACATATACCATGGTCCTATAATG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | CATTACAGGACCATGGTATATGTCATTATAGGACCATaGTATATGTCATTACAGGACCATGGTATATGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: HYRTMVYVIIGP*YMSLQDHGICH Trigger: ATGACATATACCATGGTCCTGTAATGACATATACCATGGTCCTATAATGACATATACCATGGTCCTGTAATG 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | GGCATTCTGTATGAATTCTACTGTATGTGTACTCTCTaGTCAATCTCACTTCTAGAAGTTTCCTTTAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GILYEFYCMCTL*SISLLEVSFKE Trigger: TTCCTTAAAGGAAACTTCTAGAAGTGAGATTGACCAGAGAGTACACATACAGTAGAATTCATACAGAATGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| 3UTR CCA 72 bp | ATGTTTATAAACAAAAGCTCACACATAAATTCCACGTaGGCAAAAACCCACAGCAAGTCTGTATCTCAATTA | + |
|
Preference number: 3 (lower is better) Translates to: MFINKSSHINST*AKTHSKSVSQL Trigger: TAATTGAGATACAGACTTGCTGTGGGTTTTTGCCCACGTGGAATTTATGTGTGAGCTTTTGTTTATAAACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| CDS-3UTR TCA 90 bp | CTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAAGCTGCACTCCAATAGATaGCCCCAGGGCCTCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LHPPGRGLQVGRQRCSMKLHSNR*PQGLEL Trigger: CAGTTCGAGGCCCTGGGGTCATCTATTGGAGTGCAG...CTTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CCA 90 bp | GCTCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGGCAGGGCATTCAGGATaGGCAAAGCAAAGGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALHPPGRGLQVGRQRCSMAGHSG*AKQRHL Trigger: CAGGTGCCTTTGCTTTGCCCATCCTGAATGCCCTGC...CATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| 3UTR CAA 72 bp | ACTACAGTCAGCGCTCTCCATCCGCCAGGCCGTGGCTaGCAGGTGGGAAGGCAGAGGTGCAGCATGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TTVSALHPPGRG*QVGRQRCSMKS Trigger: GCTCTTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGAGCGCTGACTGTAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| CDS-3UTR GCA 90 bp | CTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAAGGATCTTGGTGGGCTTTaGCCATCCCAACTGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LHPPGRGLQVGRQRCSMKDLGGL*PSQLVT Trigger: TGTGACCAGTTGGGATGGGCAAAGCCCACCAAGATC...CTTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CCA 90 bp | CTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAAGCGATCTGGATCTTGGTaGGCTTTGCCCATCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LHPPGRGLQVGRQRCSMKRSGSW*ALPIPT Trigger: AGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCG...CTTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CCA 90 bp | CTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAAGTGTCCAGACCTCTGCTaGCGACATCAGTCGCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHPPGRGLQVGRQRCSMKCPDLC*RHQSLE Trigger: TTCTAGCGACTGATGTCGCCAGCAGAGGTCTGGACA...CTTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| CDS-3UTR TCA 90 bp | CATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGGTCTCTTCCGCAGCTGTCTaGAGGGCTCCAGAGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HCNDTAIPRNVLPAGRVVSSAAV*RAPEGE Trigger: TTCCCCCTCTGGAGCCCTTCAGACAGCTGCGGAAGA...GACCACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR GCA 90 bp | GCTCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGCCCAGATCCCGTTTCTaGCAACCCAATAATATCACG | + |
|
Preference number: 4 (lower is better) Translates to: ALHPPGRGLQVGRQRCSMPRSRF*QPNNIT Trigger: CGTGATATTATTGGGTTGGCAGAAACGGGATCTGGG...CATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR GCA 90 bp | TCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAATCCGCTTCTTCATTTTaGCCCCAGCCACCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSARPWLAGGKAEVQHESASSF*PQPPCS Trigger: GGAACAAGGTGGCTGGGGGCAAAATGAAGAAGCGGA...TTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CCA 90 bp | CTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAAGAAGTGCTCGATGCGCTaGAAGAGTTCCACGTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LHPPGRGLQVGRQRCSMKKCSMR*KSSTSY Trigger: GTATGACGTGGAACTCTTCCAGCGCATCGAGCACTT...CTTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR GCA 90 bp | GCTCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGTTCTTTCCAATCAAGTaGTCGATGCGCTGGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALHPPGRGLQVGRQRCSMFFPIK*SMRWKS Trigger: ACTCTTCCAGCGCATCGAGCACTTGATTGGAAAGAA...CATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR GCA 90 bp | CTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAAGTTCTTCTTTTCTCCGTaGTCCCTTAACTCCATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LHPPGRGLQVGRQRCSMKFFFSP*SLNSIR Trigger: CCGGATGGAGTTAAGGGAGCACGGAGAAAAGAAGAA...CTTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CCA 90 bp | TCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGATCCGGGCAAACCTCTaGGCCTCATTCACACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHCNDTAIPRNVLPAGRVIRANL*ASFTRS Trigger: GGAACGTGTGAATGAGGCCCAGAGGTTTGCCCGGAT...CACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CCA 90 bp | TCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAATGTTCCTCACACCAATaGCGCCCTCCTTATCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPSARPWLAGGKAEVQHECSSHQ*RPPYHH Trigger: ATGATGATAAGGAGGGCGCCATTGGTGTGAGGAACA...TTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CCA 90 bp | CATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGGTCCTTCGATCTGGATCTTaGTGGGCTTTGCCCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HCNDTAIPRNVLPAGRVVLRSGS*WALPIP Trigger: TGGGATGGGCAAAGCCCACCAAGATCCAGATCGAAG...GACCACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| 3UTR CAA 72 bp | CGGCCTTTCCGCTTCTTCATTTTGCCCCCAGCCACCTaGTTCCTCACACCAATGGCGCCCTCCTTATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RPFRFFILPPAT*FLTPMAPSLSS Trigger: TGATGATAAGGAGGGCGCCATTGGTGTGAGGAACAAGGTGGCTGGGGGCAAAATGAAGAAGCGGAAAGGCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| CDS-3UTR GCA 90 bp | TCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAAAGGGTTCTTAAGAGCTaGACGCTGAAGTTTTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SPSARPWLAGGKAEVQHERVLKS*TLKFLY Trigger: GTACAAAAACTTCAGCGTGCAGCTCTTAAGAACCCT...TTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CCA 90 bp | TCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAAGTACCTTCTTGGTCATaGTGGCAGAAAAGAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SPSARPWLAGGKAEVQHEVPSWS*WQKREM Trigger: CATTTCTCTTTTCTGCCACCATGACCAAGAAGGTAC...TTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR TCA 90 bp | TCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGAACTGCTCAGAGATCTaGAAGGCCAACTCTCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SHCNDTAIPRNVLPAGRVNCSEI*KANSRV Trigger: TACTCGAGAGTTGGCCTTTCAGATCTCTGAGCAGTT...CACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR TCA 90 bp | TCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGCAATTCCACCAACAATaGCAGCACACTGCACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SHCNDTAIPRNVLPAGRVQFHQQ*QHTALQ Trigger: TTGGAGTGCAGTGTGCTGTCATTGTTGGTGGAATTG...CACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR TCA 90 bp | CACTGTAAAAGTTGTCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCGGAGGGGGATGGCAGTaGACCCGAGATTTCGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HCKSCPIAMTLQSRGTFSGGGWQ*TRDFGA Trigger: TGCTCCGAAATCTCGGGTTCACTGCCATCCCCCTCC...GGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGACAACTTTTACAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR GCA 90 bp | TCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGAAATAATATCACGACCTTaGAAGGCCAAAGGAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPSARPWLAGGKAEVQHEIISRP*KAKGIA Trigger: AGCTATTCCTTTGGCCTTGCAAGGTCGTGATATTAT...TTCATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR TCA 90 bp | CTGTGTCAACACTGTAAAAGTTGTCCCATTGCAATGACACTGCAATCCCGAGGACCGAGGCGCTTGCTCTaGCTCATCTGTCCATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCQHCKSCPIAMTLQSRGPRRLL*LICPWR Trigger: CCTCCATGGACAGATGAGTCAGAGCAAGCGCCTCGG...TCCTCGGGATTGCAGTGTCATTGCAATGGGACAACTTTTACAGTGTTGACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR GCA 90 bp | CATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGGTCGTTCAGTATCCGGTCTaGTTCATCCATGACCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HCNDTAIPRNVLPAGRVVVQYPV*FIHDQV Trigger: TACTTGGTCATGGATGAAGCAGACCGGATACTGAAC...GACCACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CCA 90 bp | TCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGTTTGCCCATCCCAACTaGTCACAAGCTTCACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SHCNDTAIPRNVLPAGRVFAHPN*SQASHN Trigger: ATTGTGTGAAGCTTGTGACCAGTTGGGATGGGCAAA...CACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CCA 90 bp | CATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGGTCAGTTTCTCCACAGTCTaGTACTTAGAGGACACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HCNDTAIPRNVLPAGRVVSFSTV*YLEDTA Trigger: TGCTGTGTCCTCTAAGTACCAGACTGTGGAGAAACT...GACCACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR TCA 90 bp | TCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGTTCCAGCCAGTTCATTaGGAATATAAACCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHCNDTAIPRNVLPAGRVFQPVH*EYKPGR Trigger: CCTACCTGGTTTATATTCTCAATGAACTGGCTGGAA...CACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR TCA 90 bp | CACTGTAAAAGTTGTCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCTCGGGGAATCACTTTaGGGATCTTGTCAACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HCKSCPIAMTLQSRGTFSLGESL*GSCQPL Trigger: CAGAGGTTGACAAGATCCTCAAAGTGATTCCCCGAG...GGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGACAACTTTTACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR TCA 90 bp | CACTGTAAAAGTTGTCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCAGCAAAGCTGTTCTCTaGGTGTTGTTACAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HCKSCPIAMTLQSRGTFSSKAVL*VLLQVL Trigger: CAGCACCTGTAACAACACTCAGAGAACAGCTTTGCT...GGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGACAACTTTTACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCAACACTGTAAAAGTTGTCCCATTGCAATGACACTGCAATCCCGAGGACAATCAAGTGCTCGATaGGCTGGAAGAGTTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LCQHCKSCPIAMTLQSRGQSSAR*AGRVPR Trigger: ACGTGGAACTCTTCCAGCGCATCGAGCACTTGATTG...TCCTCGGGATTGCAGTGTCATTGCAATGGGACAACTTTTACAGTGTTGACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CCA 90 bp | GGTTTACTCACAGAAAACACTAGGTATCCCACACTCAATCATACGCAGCAACACTGTCCAGACCTCTGCTaGCGACATCAGTCGCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLLTENTRYPTLNHTQQHCPDLC*RHQSLE Trigger: TTCTAGCGACTGATGTCGCCAGCAGAGGTCTGGACA...GTGTTGCTGCGTATGATTGAGTGTGGGATACCTAGTGTTTTCTGTGAGTAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| CDS-3UTR GCA 90 bp | CACTGTAAAAGTTGTCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCATCATCATCATCTCCTaGATCCTCTCGCTTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HCKSCPIAMTLQSRGTFSIIIIS*ILSLPF Trigger: AAACGGAAGCGAGAGGATGCAGGAGATGATGATGAT...GGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGACAACTTTTACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCAACACTGTAAAAGTTGTCCCATTGCAATGACACTGCAATCCCGAGGATTGGTATTTTCCAAGTaGTCAATCAGTCGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCQHCKSCPIAMTLQSRGLVFSK*SISRPG Trigger: TCCTGGCCGACTGATTGACCACTTGGAAAATACCAA...TCCTCGGGATTGCAGTGTCATTGCAATGGGACAACTTTTACAGTGTTGACACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| 3UTR CAA 72 bp | AAGAGTAAGCTTTTAAAATGGGCCTGGGCAGATGGCTaGCTGCTTAAGAGCACTGACTGCTCTTCTAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSKLLKWAWADG*LLKSTDCSSKD Trigger: GTCTTTAGAAGAGCAGTCAGTGCTCTTAAGCAGCAAGCCATCTGCCCAGGCCCATTTTAAAAGCTTACTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| CDS-3UTR CCA 90 bp | CACTGTAAAAGTTGTCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCGTTTTTGTACCTTCTTaGTCATGGTGGCAGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HCKSCPIAMTLQSRGTFSVFVPS*SWWQKR Trigger: TCTTTTCTGCCACCATGACCAAGAAGGTACAAAAAC...GGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGACAACTTTTACAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| 3UTR CAA 72 bp | AGATTCAGTGGTGAATTTCCCATAAGCCCTCAACTTTaGCTAGCTCATTTCAACTCTGGACAAAACCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFSGEFPISPQL*LAHFNSGQNLK Trigger: CTTGAGGTTTTGTCCAGAGTTGAAATGAGCTAGCAAAAGTTGAGGGCTTATGGGAAATTCACCACTGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGTTGCCCCCAGCCACCTaGTTCCTCACACCAATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ALHPPGRGLQVGRQRCSMLPPAT*FLTPMA Trigger: CGCCATTGGTGTGAGGAACAAGGTGGCTGGGGGCAA...CATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS CCA 90 bp | AAGGCCAACTCTCGAGTAGGGGTGAGGACCAGGGCGAACAGTCGCTaGGGCGTCTCCAGCAGGGCATTCAGGATGGGCAAAGCAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KANSRVGVRTRANSR*GVSSRAFRMGKAKA Trigger: TGCCTTTGCTTTGCCCATCCTGAATGCCCTGCTGGAGACGCCCCAGCGACTGTTCGCCCTGGTCCTCACCCCTACTCGAGAGTTGGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 ENSMUST00000205055.3 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCATCCGCCAGGCCGTGGCTTGCAGGTGGGAAGGCAGAGGTGCAGCATGTTCCGCTTCTTCATTTaGCCCCCAGCCACCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALHPPGRGLQVGRQRCSMFRFFI*PPATLF Trigger: GAACAAGGTGGCTGGGGGCAAAATGAAGAAGCGGAA...CATGCTGCACCTCTGCCTTCCCACCTGCAAGCCACGGCCTGGCGGATGGAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CAA 90 bp | TCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGGGATCTTGGTGGGCTTaGCCCATCCCAACTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SHCNDTAIPRNVLPAGRVGSWWA*PIPTGH Trigger: GTGACCAGTTGGGATGGGCAAAGCCCACCAAGATCC...CACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS TCA 90 bp | CGAGGCGCTTGCTCTGACTCATCTGTCCATGGAGGGGGATGGCAGTaGACCCGAGATTTCGGAGCAGCAAAGCTGTTCTCTGAGTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RGACSDSSVHGGGWQ*TRDFGAAKLFSECC Trigger: ACAACACTCAGAGAACAGCTTTGCTGCTCCGAAATCTCGGGTTCACTGCCATCCCCCTCCATGGACAGATGAGTCAGAGCAAGCGCCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032326.11 ENSMUST00000130851.8 ENSMUST00000204646.3 |
||
| CDS GCA 90 bp | TCATCATCTCCTGCATCCTCTCGCTTCCGTTTCTTCTTTTCTCCGTaGTCCCTTAACTCCATCCGGGCAAACCTCTGGGCCTCATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSSPASSRFRFFFSP*SLNSIRANLWASFT Trigger: TGTGAATGAGGCCCAGAGGTTTGCCCGGATGGAGTTAAGGGAGCACGGAGAAAAGAAGAAACGGAAGCGAGAGGATGCAGGAGATGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CAA 90 bp | TCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGTGCACGCTGAAGTTTTaGTACCTTCTTGGTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SHCNDTAIPRNVLPAGRVCTLKF*YLLGHG Trigger: ACCATGACCAAGAAGGTACAAAAACTTCAGCGTGCA...CACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS CCA 90 bp | CCACCAACAATGACAGCTTGCAAGGCCAAAGGAATAGCTTCGATCTaGATCTTGGTGGGCTTTGCCCATCCCAACTGGTCACAAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPTMTACKAKGIASI*ILVGFAHPNWSQAS Trigger: TGAAGCTTGTGACCAGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCGAAGCTATTCCTTTGGCCTTGCAAGCTGTCATTGTTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205244.3 |
||
| CDS GCA 90 bp | CAGGATGGGCAAAGCAAAGGCACCTGTTTTCCCAGATCCCGTTTCTaGCAACCCAATAATATCACGACCTTGCAAGGCCAAAGGAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: QDGQSKGTCFPRSRF*QPNNITTLQGQRNS Trigger: GCTATTCCTTTGGCCTTGCAAGGTCGTGATATTATTGGGTTGGCAGAAACGGGATCTGGGAAAACAGGTGCCTTTGCTTTGCCCATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 ENSMUST00000205055.3 |
||
| CDS-3UTR CAA 90 bp | CATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCAGCTGGCCGAGTGGTCATCACTTTGAGGATCTaGTCAACCTCTGTCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HCNDTAIPRNVLPAGRVVITLRI*STSVSK Trigger: TTTTGAGACAGAGGTTGACAAGATCCTCAAAGTGAT...GACCACTCGGCCAGCTGGGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS GCA 90 bp | TTGCAAGGCCAAAGGAATAGCTTCGATCTGGATCTTGGTGGGCTTTaGCCATCCCAACTGGTCACAAGCTTCACACAATACATCCGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LQGQRNSFDLDLGGL*PSQLVTSFTQYIRN Trigger: GTTACGGATGTATTGTGTGAAGCTTGTGACCAGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCGAAGCTATTCCTTTGGCCTTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 ENSMUST00000205055.3 ENSMUST00000205244.3 |
||
| CDS CCA 90 bp | GGAATAGCTTCGATCTGGATCTTGGTGGGCTTTGCCCATCCCAACTaGTCACAAGCTTCACACAATACATCCGTAACACCCAGGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GIASIWILVGFAHPN*SQASHNTSVTPRSL Trigger: TAAAGACCTGGGTGTTACGGATGTATTGTGTGAAGCTTGTGACCAGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCGAAGCTATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 ENSMUST00000205055.3 ENSMUST00000205244.3 |
||
| CDS CCA 90 bp | CCAATAATATCACGACCTTGCAAGGCCAAAGGAATAGCTTCGATCTaGATCTTGGTGGGCTTTGCCCATCCCAACTGGTCACAAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PIISRPCKAKGIASI*ILVGFAHPNWSQAS Trigger: TGAAGCTTGTGACCAGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCGAAGCTATTCCTTTGGCCTTGCAAGGTCGTGATATTATTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 ENSMUST00000205055.3 |
||
| CDS TCA 90 bp | GGGATGGCAGTGAACCCGAGATTTCGGAGCAGCAAAGCTGTTCTCTaGGTGTTGTTACAGGTGCTGCAGAATATCATAAAGGAGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GMAVNPRFRSSKAVL*VLLQVLQNIIKEFP Trigger: TGGAAACTCCTTTATGATATTCTGCAGCACCTGTAACAACACTCAGAGAACAGCTTTGCTGCTCCGAAATCTCGGGTTCACTGCCATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032326.11 ENSMUST00000130851.8 ENSMUST00000204646.3 |
||
| CDS-3UTR CAA 90 bp | CTGTGTCAACACTGTAAAAGTTGTCCCATTGCAATGACACTGCAATCCCGAGGATCTCGGGGAATCACTTaGAGGATCTTGTCAACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCQHCKSCPIAMTLQSRGSRGIT*RILSTS Trigger: AGAGGTTGACAAGATCCTCAAAGTGATTCCCCGAGA...TCCTCGGGATTGCAGTGTCATTGCAATGGGACAACTTTTACAGTGTTGACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CAA 90 bp | CACTGTAAAAGTTGTCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCGTCGGAATGTCAAAATaGACCACTACATCCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: HCKSCPIAMTLQSRGTFSVGMSK*TTTSTW Trigger: CCATGTGGATGTAGTGGTCAATTTTGACATTCCGAC...GGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGACAACTTTTACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000155022.3 |
||
| CDS-3UTR CAA 90 bp | CACTGTAAAAGTTGTCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCAATAATATCACGACCTaGCAAGGCCAAAGGAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: HCKSCPIAMTLQSRGTFSNNITT*QGQRNS Trigger: GCTATTCCTTTGGCCTTGCAAGGTCGTGATATTATT...GGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGACAACTTTTACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CAA 90 bp | CACTGTAAAAGTTGTCCCATTGCAATGACACTGCAATCCCGAGGAACGTTCTCCCTTAAGTTGAAGCCTTaGGTATTTTCCAAGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HCKSCPIAMTLQSRGTFSLKLKP*VFSKWS Trigger: TGACCACTTGGAAAATACCAAAGGCTTCAACTTAAG...GGAGAACGTTCCTCGGGATTGCAGTGTCATTGCAATGGGACAACTTTTACAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS-3UTR CAA 90 bp | TGTATGTGTACTCTCTGGTCAATCTCACTTCTAGAAGTTTCCTTTAAGGAAATAGTCGGAATGTCAAAATaGACCACTACATCCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: CMCTLWSISLLEVSFKEIVGMSK*TTTSTW Trigger: CCATGTGGATGTAGTGGTCAATTTTGACATTCCGAC...TATTTCCTTAAAGGAAACTTCTAGAAGTGAGATTGACCAGAGAGTACACATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155022.3 |
||
| CDS GCA 72 bp | CCTGCATCCTCTCGCTTCCGTTTCTTCTTTTCTCCGTaGTCCCTTAACTCCATCCGGGCAAACCTCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PASSRFRFFFSP*SLNSIRANLWA Trigger: GGCCCAGAGGTTTGCCCGGATGGAGTTAAGGGAGCACGGAGAAAAGAAGAAACGGAAGCGAGAGGATGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032326.11 |
||
| CDS TCA 72 bp | CAGTCGGCCAGGAGTAGCACACTGCACTCCAATAGATaGCCCCAGGGCCTCGAACTGCTCAGAGATCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QSARSSTLHSNR*PQGLELLRDLK Trigger: TTTCAGATCTCTGAGCAGTTCGAGGCCCTGGGGTCATCTATTGGAGTGCAGTGTGCTACTCCTGGCCGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204646.3 |
||
| CDS CCA 72 bp | CCACTACATCCACATGGGGTATGTCCAGACCTCTGCTaGCGACATCAGTCGCTAGAAGAATGGACCTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLHPHGVCPDLC*RHQSLEEWTSP Trigger: AGGCGAGGTCCATTCTTCTAGCGACTGATGTCGCCAGCAGAGGTCTGGACATACCCCATGTGGATGTAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000155022.3 ENSMUST00000204646.3 |
||
| CDS TCA 72 bp | TTAAATGTTTTCGTTTCCTCCTCTTCCGCAGCTGTCTaGAGGGCTCCAGAGGGGGAATCGGGTTCCTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LNVFVSSSSAAV*RAPEGESGSSS Trigger: GGACGAGGAACCCGATTCCCCCTCTGGAGCCCTTCAGACAGCTGCGGAAGAGGAGGAAACGAAAACATTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000032326.11 ENSMUST00000130851.8 ENSMUST00000204646.3 ENSMUST00000205055.3 ENSMUST00000205244.3 |
||
| CDS TCA 72 bp | TGCTCTGACTCATCTGTCCATGGAGGGGGATGGCAGTaGACCCGAGATTTCGGAGCAGCAAAGCTGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSDSSVHGGGWQ*TRDFGAAKLFS Trigger: AGAGAACAGCTTTGCTGCTCCGAAATCTCGGGTTCACTGCCATCCCCCTCCATGGACAGATGAGTCAGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032326.11 ENSMUST00000130851.8 ENSMUST00000204646.3 |
||
| CDS CCA 72 bp | TCACGACCTTGCAAGGCCAAAGGAATAGCTTCGATCTaGATCTTGGTGGGCTTTGCCCATCCCAACTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRPCKAKGIASI*ILVGFAHPNWS Trigger: TGACCAGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCGAAGCTATTCCTTTGGCCTTGCAAGGTCGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 ENSMUST00000205055.3 |
||
| CDS CAA 72 bp | CCTTGCAAGGCCAAAGGAATAGCTTCGATCTGGATCTaGGTGGGCTTTGCCCATCCCAACTGGTCACAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PCKAKGIASIWI*VGFAHPNWSQA Trigger: AGCTTGTGACCAGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCGAAGCTATTCCTTTGGCCTTGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 ENSMUST00000205055.3 |
||
| CDS CAA 72 bp | GCTTGCAAGGCCAAAGGAATAGCTTCGATCTGGATCTaGGTGGGCTTTGCCCATCCCAACTGGTCACAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ACKAKGIASIWI*VGFAHPNWSQA Trigger: AGCTTGTGACCAGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCGAAGCTATTCCTTTGGCCTTGCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205244.3 |
||
| CDS TCA 72 bp | TCCACCAACAATGACAGCACACTGCACTCCAATAGATaGCCCCAGGGCCTCGAACTGCTCAGAGATCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: STNNDSTLHSNR*PQGLELLRDLK Trigger: TTTCAGATCTCTGAGCAGTTCGAGGCCCTGGGGTCATCTATTGGAGTGCAGTGTGCTGTCATTGTTGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 |
||
| CDS CCA 72 bp | TCGATCTGGATCTTGGTGGGCTTTGCCCATCCCAACTaGTCACAAGCTTCACACAATACATCCGTAACACCC | + |
|
Preference number: 6 (lower is better) Translates to: SIWILVGFAHPN*SQASHNTSVTP Trigger: GGGTGTTACGGATGTATTGTGTGAAGCTTGTGACCAGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 ENSMUST00000205055.3 ENSMUST00000205244.3 |
||
| CDS CCA 72 bp | ATGACAGCTTGCAAGGCCAAAGGAATAGCTTCGATCTaGATCTTGGTGGGCTTTGCCCATCCCAACTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: MTACKAKGIASI*ILVGFAHPNWS Trigger: TGACCAGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCGAAGCTATTCCTTTGGCCTTGCAAGCTGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205244.3 |
||
| CDS CAA 90 bp | ATATCACGACCTTGCAAGGCCAAAGGAATAGCTTCGATCTGGATCTaGGTGGGCTTTGCCCATCCCAACTGGTCACAAGCTTCACACAAT | + |
|
Preference number: 6 (lower is better) Translates to: ISRPCKAKGIASIWI*VGFAHPNWSQASHN Trigger: ATTGTGTGAAGCTTGTGACCAGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCGAAGCTATTCCTTTGGCCTTGCAAGGTCGTGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 ENSMUST00000205055.3 |
||
| CDS CAA 90 bp | ACAATGACAGCTTGCAAGGCCAAAGGAATAGCTTCGATCTGGATCTaGGTGGGCTTTGCCCATCCCAACTGGTCACAAGCTTCACACAAT | + |
|
Preference number: 6 (lower is better) Translates to: TMTACKAKGIASIWI*VGFAHPNWSQASHN Trigger: ATTGTGTGAAGCTTGTGACCAGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCGAAGCTATTCCTTTGGCCTTGCAAGCTGTCATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205244.3 |
||
| CDS TCA 72 bp | AAGAGCTGCACGCTGAAGTTTTTGTACTCCAATAGATaGCCCCAGGGCCTCGAACTGCTCAGAGATCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KSCTLKFLYSNR*PQGLELLRDLK Trigger: TTTCAGATCTCTGAGCAGTTCGAGGCCCTGGGGTCATCTATTGGAGTACAAAAACTTCAGCGTGCAGCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205055.3 |
||
| CDS TCA 72 bp | ACAGCACATTTCACAGGGTTCTTAAGAGCTGCACGCTaGAGTTTTTGTACTCCAATAGATGACCCCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TAHFTGFLRAAR*SFCTPIDDPRA Trigger: GGCCCTGGGGTCATCTATTGGAGTACAAAAACTTCAGCGTGCAGCTCTTAAGAACCCTGTGAAATGTGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205055.3 |
||
| CDS GCA 72 bp | CAAAGGAATAGCTTCGATCTGGATCTTGGTGGGCTTTaGCCATCCCAACTGGTCACAAGCTTCACACAATAC | + |
|
Preference number: 6 (lower is better) Translates to: QRNSFDLDLGGL*PSQLVTSFTQY Trigger: GTATTGTGTGAAGCTTGTGACCAGTTGGGATGGGCAAAGCCCACCAAGATCCAGATCGAAGCTATTCCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 ENSMUST00000205055.3 ENSMUST00000205244.3 |
||
| CDS CAA 90 bp | GCTTCATCCATGACCAAGTACTTAAGAGCTCTTAAGTTGAAGCCTTaGGTATTTTCCAAGTGGTCAATCAGTCGGCCAGGAGTAGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: ASSMTKYLRALKLKP*VFSKWSISRPGVAH Trigger: GTGTGCTACTCCTGGCCGACTGATTGACCACTTGGAAAATACCAAAGGCTTCAACTTAAGAGCTCTTAAGTACTTGGTCATGGATGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204646.3 |
||
| CDS TCA 72 bp | ACAGCACATTTCACAGGGTTCTTAAGAGCTGCACGCTaGAGTTTTTGTACCTTCTTGGTCATGGTGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TAHFTGFLRAAR*SFCTFLVMVAE Trigger: TTCTGCCACCATGACCAAGAAGGTACAAAAACTTCAGCGTGCAGCTCTTAAGAACCCTGTGAAATGTGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 ENSMUST00000205244.3 |
||
| CDS TCA 72 bp | GTGAACCCGAGATTTCGGAGCAGCAAAGCTGTTCTCTaGGTGTTGTTACAGGTGCTGCAGAATATCATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VNPRFRSSKAVL*VLLQVLQNIIK Trigger: CTTTATGATATTCTGCAGCACCTGTAACAACACTCAGAGAACAGCTTTGCTGCTCCGAAATCTCGGGTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032326.11 ENSMUST00000130851.8 ENSMUST00000204646.3 |
||
| CDS CCA 72 bp | ACAGGCAGCTTCTTTCCAATCAAGTGCTCGATGCGCTaGAAGAGTTCCACGTCATACTGTGTTACAAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: TGSFFPIKCSMR*KSSTSYCVTKV Trigger: TACTTTTGTAACACAGTATGACGTGGAACTCTTCCAGCGCATCGAGCACTTGATTGGAAAGAAGCTGCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 |
||
| CDS CAA 90 bp | GCTTCATCCATGACCAAGTACTTAAGAGCTCTTAAGTTGAAGCCTTaGGTATTTTCCAAGTGGTCAATCAGTCGGCCAGGAGTAGCTATT | + |
|
Preference number: 6 (lower is better) Translates to: ASSMTKYLRALKLKP*VFSKWSISRPGVAI Trigger: AATAGCTACTCCTGGCCGACTGATTGACCACTTGGAAAATACCAAAGGCTTCAACTTAAGAGCTCTTAAGTACTTGGTCATGGATGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000205244.3 |
||
| CDS CAA 72 bp | ATGACCAAGTACTTAAGAGCTCTTAAGTTGAAGCCTTaGGTATTTTCCAAGTGGTCAATCAGTCGGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: MTKYLRALKLKP*VFSKWSISRPG Trigger: TCCTGGCCGACTGATTGACCACTTGGAAAATACCAAAGGCTTCAACTTAAGAGCTCTTAAGTACTTGGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032326.11 ENSMUST00000154558.3 ENSMUST00000204646.3 ENSMUST00000205244.3 |
||
| CDS TCA 72 bp | ACAGCACATTTCACAGGGTTCTTAAGAGCTGCACGCTaGAGTTTTTGTACCAGGTCTTTAAATGTTTTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: TAHFTGFLRAAR*SFCTRSLNVFV Trigger: AACGAAAACATTTAAAGACCTGGTACAAAAACTTCAGCGTGCAGCTCTTAAGAACCCTGTGAAATGTGCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130851.8 |
||