Pregenerated sensors for DDX42 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020705Ensembl transcript IDs: ENSMUST00000021046.6
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAAGCCTGTGTCTGGAAGGCTGTCTTTCCTACGTGTCTCAGGGCTaGAAACAGTCTGGGGAACCTGAGCGCTCAGGCATCTTCCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: QSLCLEGCLSYVSQG*KQSGEPERSGIFPA Trigger: TGCAGGGAAGATGCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAGCCTTCCAGACACAGGCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| 3UTR TCA 90 bp | CTGTCTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTaGGCGCTCAGGCATCTTCCCTGCAAACATCTGAAAGCACCACTG | + |
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Preference number: 1 (lower is better) Translates to: LSFLRVSGLETVWGT*ALRHLPCKHLKAPL Trigger: CAGTGGTGCTTTCAGATGTTTGCAGGGAAGATGCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| 3UTR TCA 90 bp | CTCTGCTTTCCAGGGCCAGCTCAGGTTCCCAAGGAAACCTCTGAATaGACACCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAA | + |
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Preference number: 1 (lower is better) Translates to: LCFPGPAQVPKETSE*TPDEGTIHSPVLHQ Trigger: TTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGGTGTTCATTCAGAGGTTTCCTTGGGAACCTGAGCTGGCCCTGGAAAGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| 3UTR TCA 72 bp | GAACCTGAGCGCTCAGGCATCTTCCCTGCAAACATCTaGAAGCACCACTGCTCCCCAAGCATCCCTAACAGG | + |
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Preference number: 3 (lower is better) Translates to: EPERSGIFPANI*KHHCSPSIPNR Trigger: CCTGTTAGGGATGCTTGGGGAGCAGTGGTGCTTTCAGATGTTTGCAGGGAAGATGCCTGAGCGCTCAGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| 3UTR TCA 72 bp | CCAGGGCCAGCTCAGGTTCCCAAGGAAACCTCTGAATaGACACCAGATGAAGGTACAATCCACTCTCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: PGPAQVPKETSE*TPDEGTIHSPV Trigger: AACTGGAGAGTGGATTGTACCTTCATCTGGTGTTCATTCAGAGGTTTCCTTGGGAACCTGAGCTGGCCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| 3UTR-3UTR CAA 90 bp | AGTGAGTTTTTGTGCCCTAAAAGGCCCTTTCTCCCTAAGTATTCTACTTACCCTGGGGGTCTGTATATCTaGGACCCCAACCCAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: SEFLCPKRPFLPKYSTYPGGLYI*DPNPAL Trigger: CAGGGCTGGGTTGGGGTCCAAGATATACAGACCCCC...AGGGTAAGTAGAATACTTAGGGAGAAAGGGCCTTTTAGGGCACAAAAACTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | GCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCATCTTCCCTGCAAACATCTGGCTCTCTCCGTGTCTaGCGGCACTTCCTCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: AGNSLGNLSAQASSLQTSGSLRV*RHFLHA Trigger: GGCATGGAGGAAGTGCCGGCAGACACGGAGAGAGCC...AGATGTTTGCAGGGAAGATGCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | TTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCAGCCCTGAGCGGTATCCATCTCCATaGCGCCCACCATCTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: FSTKGRGSVYLGPQPSPERYPSP*RPPSPC Trigger: GCATGGAGATGGTGGGCGCCATGGAGATGGATACCG...CTCAGGGCTGGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | ACTGCTCCCCAAGCATCCCTAACAGGGCAGAAGTTGGGACTGCCTGGCCACAGCCAGAGACCCGAAGGTTaGGCTTATGTCGCAGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: TAPQASLTGQKLGLPGHSQRPEG*AYVAGL Trigger: TAGACCTGCGACATAAGCTCAACCTTCGGGTCTCTG...GCTGTGGCCAGGCAGTCCCAACTTCTGCCCTGTTAGGGATGCTTGGGGAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | TTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCAGCCCTGAGCGGTGGCCATCAGTATaGCGGCTACCACTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: FSTKGRGSVYLGPQPSPERWPSV*RLPLSG Trigger: TCCAGAAAGTGGTAGCCGTCATACTGATGGCCACCG...CTCAGGGCTGGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | GCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCATCTTCCCTGCAAACATCTTGGCCTGCTCCCACATaGTCCCTCCTCCATACACGG | + |
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Preference number: 4 (lower is better) Translates to: AGNSLGNLSAQASSLQTSWPAPT*SLLHTR Trigger: CCGTGTATGGAGGAGGGAGCATGTGGGAGCAGGCCA...AGATGTTTGCAGGGAAGATGCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | GCTGTCTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTCCATCCACTTGCCCCTaGAGAAGAGGTTCCGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: AVFPTCLRAGNSLGNLSAPSTCP*RRGSGL Trigger: AAGGCCGGAACCTCTTCTGCAGGGGCAAGTGGATGG...AGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | ACACCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCCCGGCACTTCCTCCATaGCTGGTCTCTCCATGTCGG | + |
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Preference number: 4 (lower is better) Translates to: TPDEGTIHSPVLHQGQGVPALPP*LVSPCR Trigger: CCGACATGGAGAGACCAGGCATGGAGGAAGTGCCGG...GACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | CTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCGCCCCAAAGGCACTATaGGACTGCTGTGGCAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LSYVSQGWKQSGEPERSGAPKAL*DCCGSL Trigger: CAAACTGCCACAGCAGTCCCATAGTGCCTTTGGGGC...GCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | CCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTGGGCTGCAACATCAGTaGCCACCAGGACGGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: PDEGTIHSPVLHQGQGVCGLQHQ*PPGRGC Trigger: ACATCCCCGTCCTGGTGGCCACTGATGTTGCAGCCC...ACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| 3UTR CAA 72 bp | TCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTaGGACCCCAACCCAGCCCTGAGACGCCTCATTACC | + |
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Preference number: 4 (lower is better) Translates to: SSSPPRAGGLYI*DPNPALRRLIT Trigger: GGTAATGAGGCGTCTCAGGGCTGGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | GCTGTCTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTGTCCGGCCAATCCTGTaGGTGTGCGTATCAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: AVFPTCLRAGNSLGNLSAVRPIL*VCVSMS Trigger: GGACATTGATACGCACACTCACAGGATTGGCCGGAC...AGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | CTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCGGCTTGGAATGGAACTaGTGGCGGGTAGGTGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LSYVSQGWKQSGEPERSGGLEWN*WRVGEF Trigger: AAACTCACCTACCCGCCAGCAGTTCCATTCCAAGCC...GCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | ACACCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCATCCAGACCACGGGCTaGAACATCAGTGGCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: TPDEGTIHSPVLHQGQGVIQTTG*NISGHQ Trigger: CTGGTGGCCACTGATGTTGCAGCCCGTGGTCTGGAT...GACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | ACTGCTCCCCAAGCATCCCTAACAGGGCAGAAGTTGGGACTGCCTGGCCACAGCATCCAGAAGAAGAGCTaGCTGCCCCAAAGGCACTAT | + |
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Preference number: 4 (lower is better) Translates to: TAPQASLTGQKLGLPGHSIQKKS*LPQRHY Trigger: ATAGTGCCTTTGGGGCAGCCAGCTCTTCTTCTGGAT...GCTGTGGCCAGGCAGTCCCAACTTCTGCCCTGTTAGGGATGCTTGGGGAGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | GCTGTCTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTAGCAAAGCTACTTCCTaGTCTGGGAGGTGCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: AVFPTCLRAGNSLGNLSASKATS*SGRCST Trigger: GGTGCTGCACCTCCCAGACCAGGAAGTAGCTTTGCT...AGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | ACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCTTCCTGAAGGGCCTTaGCCTGCTCCCACATGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TIHSPVLHQGQGVCISWTLPEGP*PAPTCS Trigger: GGAGCATGTGGGAGCAGGCCAAGGCCCTTCAGGAAG...GGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | ACTGCTCCCCAAGCATCCCTAACAGGGCAGAAGTTGGGACTGCCTGGCCACAGCTCAACTGCTGTGGAGTaGGGTTGGTTATCTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: TAPQASLTGQKLGLPGHSSTAVE*GWLSPH Trigger: ATGAGGAGATAACCAACCTCACTCCACAGCAGTTGA...GCTGTGGCCAGGCAGTCCCAACTTCTGCCCTGTTAGGGATGCTTGGGGAGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | TTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCAGCCCTGAGGAGGTTCCGGCCTTCTaGTTACTTAAACTGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FSTKGRGSVYLGPQPSPEEVPAF*LLKLAA Trigger: TGCAGCCAGTTTAAGTAATCAGAAGGCCGGAACCTC...CTCAGGGCTGGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | TTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCAGCCCTGAGGGGCCAAATAAAGGCTaGAGTTTTCCCACTGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: FSTKGRGSVYLGPQPSPEGPNKG*SFPTAC Trigger: ACAGGCAGTGGGAAAACTGCAGCCTTTATTTGGCCC...CTCAGGGCTGGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | ACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCAACCACCCCAGCAGTTaGGTTCTCTGCCATGTATCG | + |
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Preference number: 4 (lower is better) Translates to: TLQFSTKGRGSVYLGPQPNHPSS*VLCHVS Trigger: CGATACATGGCAGAGAACCCAACTGCTGGGGTGGTT...GGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | CTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCCCTGCTTCAGGTTACTaGCTAGCTCTTCAGCATTGG | + |
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Preference number: 4 (lower is better) Translates to: LSYVSQGWKQSGEPERSGPASGY*LALQHW Trigger: CCAATGCTGAAGAGCTAGCCAGTAACCTGAAGCAGG...GCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | GCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCATCTTCCCTGCAAACATCTCCTCCACTTCAGCCATaGATGCCTCTAAGGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: AGNSLGNLSAQASSLQTSPPLQP*MPLRGH Trigger: ATGACCCCTTAGAGGCATTCATGGCTGAAGTGGAGG...AGATGTTTGCAGGGAAGATGCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | CTGGAAGGCTGTCTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTCTGTCAGGACGAACATaGCTTGCTATGGACCGAACC | + |
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Preference number: 4 (lower is better) Translates to: LEGCLSYVSQGWKQSGEPLSGRT*LAMDRT Trigger: GGTTCGGTCCATAGCAAGTCATGTTCGTCCTGACAG...AGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAGCCTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | TTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCAGCCCTGAGTATTCCCAGAGTTGTTaGAGCCTGGGATGTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FSTKGRGSVYLGPQPSPEYSQSC*SLGCSW Trigger: CCAAGAACATCCCAGGCTTCAACAACTCTGGGAATA...CTCAGGGCTGGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | CCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTAGAAGAAGAGCTGGCTaGCCCAAAGGCACTATGGGA | + |
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Preference number: 4 (lower is better) Translates to: PDEGTIHSPVLHQGQGVCRRRAG*PKGTMG Trigger: TCCCATAGTGCCTTTGGGGCAGCCAGCTCTTCTTCT...ACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | ACACCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCACTAGTCCATCCACTTaGCCCTGCAGAAGAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: TPDEGTIHSPVLHQGQGVTSPST*PCRRGS Trigger: GGAACCTCTTCTGCAGGGGCAAGTGGATGGACTAGT...GACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | ACTGCTCCCCAAGCATCCCTAACAGGGCAGAAGTTGGGACTGCCTGGCCACAGCGAAAGAAGGAAGCTGTaGTGGAGCAGACTTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TAPQASLTGQKLGLPGHSERRKL*WSRLSK Trigger: TTTGGAAAGTCTGCTCCACCACAGCTTCCTTCTTTC...GCTGTGGCCAGGCAGTCCCAACTTCTGCCCTGTTAGGGATGCTTGGGGAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | ACTGCTCCCCAAGCATCCCTAACAGGGCAGAAGTTGGGACTGCCTGGCCACAGCGTCTATCAACTGCTGTaGAGTGAGGTTGGTTATCTC | + |
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Preference number: 4 (lower is better) Translates to: TAPQASLTGQKLGLPGHSVYQLL*SEVGYL Trigger: GAGATAACCAACCTCACTCCACAGCAGTTGATAGAC...GCTGTGGCCAGGCAGTCCCAACTTCTGCCCTGTTAGGGATGCTTGGGGAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | TTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCAGCCCTGAGTCCATACACGGCCACTaGTCGAAGATTATACGCTTT | + |
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Preference number: 4 (lower is better) Translates to: FSTKGRGSVYLGPQPSPESIHGH*SKIIRF Trigger: AAAGCGTATAATCTTCGATCAGTGGCCGTGTATGGA...CTCAGGGCTGGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | CTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCCTCTTGTACTGGGACTaGAAAGCTGCTTTCATTGCT | + |
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Preference number: 4 (lower is better) Translates to: LSYVSQGWKQSGEPERSGLLYWD*KAAFIA Trigger: AGCAATGAAAGCAGCTTTTCAGTCCCAGTACAAGAG...GCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | ACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCACATACAACAATCTCTaGCCCTTCCTGAAGGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TLQFSTKGRGSVYLGPQPTYNNL*PFLKGL Trigger: AAGGCCCTTCAGGAAGGGGCAGAGATTGTTGTATGT...GGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | TTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCAGCCCTGAGAGGACGAACATGACTTaGTATGGACCGAACCTGATA | + |
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Preference number: 4 (lower is better) Translates to: FSTKGRGSVYLGPQPSPERTNMT*YGPNLI Trigger: TATCAGGTTCGGTCCATAGCAAGTCATGTTCGTCCT...CTCAGGGCTGGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | ACTGCTCCCCAAGCATCCCTAACAGGGCAGAAGTTGGGACTGCCTGGCCACAGCGGTCACCAGCAAAATTaGTGTCCTTTGGAGTCAATA | + |
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Preference number: 4 (lower is better) Translates to: TAPQASLTGQKLGLPGHSGHQQN*CPLESI Trigger: TATTGACTCCAAAGGACAGCAATTTTGCTGGTGACC...GCTGTGGCCAGGCAGTCCCAACTTCTGCCCTGTTAGGGATGCTTGGGGAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | TTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCAGCCCTGAGCGAAACCAGGCATTCTaGATTGCAAGATCTAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: FSTKGRGSVYLGPQPSPERNQAF*IARSKS Trigger: GCTCTTAGATCTTGCAATGCAGAATGCCTGGTTTCG...CTCAGGGCTGGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | CTGGAAGGCTGTCTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTACTATGGGACTGCTGTaGCAGTTTGGCTTCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LEGCLSYVSQGWKQSGEPTMGLL*QFGFLL Trigger: AAGGAGGAAGCCAAACTGCCACAGCAGTCCCATAGT...AGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAGCCTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | ACTGCTCCCCAAGCATCCCTAACAGGGCAGAAGTTGGGACTGCCTGGCCACAGCGAACATGACTTGCTATaGACCGAACCTGATACTCAA | + |
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Preference number: 4 (lower is better) Translates to: TAPQASLTGQKLGLPGHSEHDLL*TEPDTQ Trigger: TTGAGTATCAGGTTCGGTCCATAGCAAGTCATGTTC...GCTGTGGCCAGGCAGTCCCAACTTCTGCCCTGTTAGGGATGCTTGGGGAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | CTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCTCCTTAGAAACATGTTaGTTGGCTCCTTCCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LSYVSQGWKQSGEPERSGSLETC*LAPSRF Trigger: GAACCTGGAAGGAGCCAACCAACATGTTTCTAAGGA...GCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | ACACCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCAGAAGGGTAGGTCACTaGGGCACTACTGATATTCCC | + |
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Preference number: 4 (lower is better) Translates to: TPDEGTIHSPVLHQGQGVRRVGH*GTTDIP Trigger: GGGAATATCAGTAGTGCCCCAGTGACCTACCCTTCT...GACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | CCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTTCTTTTGGGTGGCTCTaGAACAGCAAAGCCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: PDEGTIHSPVLHQGQGVCSFGWL*NSKAIR Trigger: CCTGATGGCTTTGCTGTTCCAGAGCCACCCAAAAGA...ACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | ACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCATCACTGTCAGAGTCTaGGGGCTTGGAATGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: TIHSPVLHQGQGVCISWTITVRV*GLGMEL Trigger: CAGTTCCATTCCAAGCCCGCAGACTCTGACAGTGAT...GGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR GCA 90 bp | CTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCAGCAGTTGGGTTCTCTaGCATGTATCGAAAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSYVSQGWKQSGEPERSGSSWVL*HVSKIS Trigger: GCTTATTTTCGATACATGGCAGAGAACCCAACTGCT...GCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | CTGGAAGGCTGTCTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTAGAAGGAAGCTGTGGTaGAGCAGACTTTCCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LEGCLSYVSQGWKQSGEPRRKLW*SRLSKS Trigger: GGATTTGGAAAGTCTGCTCCACCACAGCTTCCTTCT...AGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAGCCTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | CTGGAAGGCTGTCTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTTTGGAATGGAACTGCTaGCGGGTAGGTGAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEGCLSYVSQGWKQSGEPLEWNC*RVGEFS Trigger: TGAAAACTCACCTACCCGCCAGCAGTTCCATTCCAA...AGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAGCCTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | ACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCTTACTGGGTCCGGAATaGAGAATCTCCACAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLQFSTKGRGSVYLGPQPLLGPE*RISTIC Trigger: ACAGATTGTGGAGATTCTCCATTCCGGACCCAGTAA...GGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | CCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTGCCAGTTCCATTTACTaGGTCCGGAATGGAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PDEGTIHSPVLHQGQGVCASSIY*VRNGES Trigger: AGATTCTCCATTCCGGACCCAGTAAATGGAACTGGC...ACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR GCA 90 bp | CCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTAAACCGCTTACACTCTaGGTGGATCTGTTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PDEGTIHSPVLHQGQGVCKPLTL*VDLLTK Trigger: CTTTGTCAACAGATCCACGCAGAGTGTAAGCGGTTT...ACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | ACACCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCGTGTCTTATCTGTCTTaGTGTCCACTTTGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TPDEGTIHSPVLHQGQGVVSYLS*CPLCPS Trigger: GGATGGACAAAGTGGACAGCAAGACAGATAAGACAC...GACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCTTGTCAGGACTATTATaGCCCTGCTGTGCTGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: TLQFSTKGRGSVYLGPQPLSGLL*PCCAEL Trigger: TAATTCAGCACAGCAGGGCCATAATAGTCCTGACAA...GGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | CTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCTTCGAAAAGTTGCACTaGATAAGAGAGTTTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSYVSQGWKQSGEPERSGFEKLH*IREFVC Trigger: ACAGACAAACTCTCTTATTCAGTGCAACTTTTCGAA...GCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCCGTATCAATGTCCCGTaGTACATCATAGTTAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLQFSTKGRGSVYLGPQPRINVP*YIIVND Trigger: GTCATTAACTATGATGTAGCACGGGACATTGATACG...GGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | AGTGAGTTTTTGTGCCCTAAAAGGCCCTTTCTCCCTAAGTATTCTACTTACCCTTCTGCGGGCTTGGAATaGAACTGCTGGCGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SEFLCPKRPFLPKYSTYPSAGLE*NCWRVG Trigger: ACCTACCCGCCAGCAGTTCCATTCCAAGCCCGCAGA...AGGGTAAGTAGAATACTTAGGGAGAAAGGGCCTTTTAGGGCACAAAAACTCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | TATGTAGCAACTAACTTGTATGGTAGAAACGACAGCCCTCAGGTCCCAGTAGTAAGCTACTTCCTGGTCTaGGAGGTGCAGCACCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YVATNLYGRNDSPQVPVVSYFLV*EVQHQR Trigger: TCTCTGGTGCTGCACCTCCCAGACCAGGAAGTAGCT...TACTACTGGGACCTGAGGGCTGTCGTTTCTACCATACAAGTTAGTTGCTACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CCA 90 bp | GCTGTCTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTTCTGATTACTTAAACTaGCTGCAACAAAGTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVFPTCLRAGNSLGNLSASDYLN*LQQSDS Trigger: AGAGTCACTTTGTTGCAGCCAGTTTAAGTAATCAGA...AGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR TCA 90 bp | AGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGTCATCAAACCCAAAATaGGCAAAGCTACTTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RYNPLSSSPPRAGGLYILSSNPK*AKLLPG Trigger: ACCAGGAAGTAGCTTTGCTCATTTTGGGTTTGATGA...CAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | ACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCGATTTCCTAATCTGGTaGATAAGTTGTTCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLQFSTKGRGSVYLGPQPDFLIW*ISCSSN Trigger: GTTTGATGAACAACTTATGCACCAGATTAGGAAATC...GGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR GCA 90 bp | AGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGAAAAGCTGCTTTCATTaGTGTGAGCCTATCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RYNPLSSSPPRAGGLYILKSCFH*CEPISH Trigger: ATGGGAGATAGGCTCACAGCAATGAAAGCAGCTTTT...CAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | TATGTAGCAACTAACTTGTATGGTAGAAACGACAGCCCTCAGGTCCCAGTAGTACTTTGTCCATCCTGCTaGTATCCACCTTGGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YVATNLYGRNDSPQVPVVLCPSC*YPPWGP Trigger: TGGACCCCAAGGTGGATAGCAGCAGGATGGACAAAG...TACTACTGGGACCTGAGGGCTGTCGTTTCTACCATACAAGTTAGTTGCTACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | TATGTAGCAACTAACTTGTATGGTAGAAACGACAGCCCTCAGGTCCCAGTAGTAACCCTGACACTGTATTaGGGTCGGCTGTGTGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: YVATNLYGRNDSPQVPVVTLTLY*GRLCVL Trigger: GAGTACACACAGCCGACCCCAATACAGTGTCAGGGT...TACTACTGGGACCTGAGGGCTGTCGTTTCTACCATACAAGTTAGTTGCTACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CCA 90 bp | AGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGCACAATAACTGCAATTaGTCCATCACCTGGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RYNPLSSSPPRAGGLYILHNNCN*SITWFQ Trigger: TTGGAACCAGGTGATGGACCAATTGCAGTTATTGTG...CAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | CTGGAAGGCTGTCTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTCAATCAAGATGTCTCTaGCCAACTTTTCAATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEGCLSYVSQGWKQSGEPQSRCL*PTFQSS Trigger: AGAAGATTGAAAAGTTGGCCAGAGACATCTTGATTG...AGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAGCCTTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | AGTGAGTTTTTGTGCCCTAAAAGGCCCTTTCTCCCTAAGTATTCTACTTACCCTCTGCTTTCATTGCTGTaGGCCTATCTCCCATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SEFLCPKRPFLPKYSTYPLLSLL*AYLPWL Trigger: GAGCCATGGGAGATAGGCTCACAGCAATGAAAGCAG...AGGGTAAGTAGAATACTTAGGGAGAAAGGGCCTTTTAGGGCACAAAAACTCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | AGTGAGTTTTTGTGCCCTAAAAGGCCCTTTCTCCCTAAGTATTCTACTTACCCTAACCAAATCCCCGCTTaGTTCCAGGGCCGCCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SEFLCPKRPFLPKYSTYPNQIPA*FQGRLY Trigger: ATAAAGGCGGCCCTGGAACCAAGCGGGGATTTGGTT...AGGGTAAGTAGAATACTTAGGGAGAAAGGGCCTTTTAGGGCACAAAAACTCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | ACACCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCGTAAATCTACATTGCTaGAGTCTTCTTCTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPDEGTIHSPVLHQGQGVVNLHC*SLLLHL Trigger: AAGATGAAGAAGAAGACTCCAGCAATGTAGATTTAC...GACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | ACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCTTTGGAAGGTGCAATTaGATTTCCATCACTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TIHSPVLHQGQGVCISWTFGRCN*ISITVI Trigger: TATGACAGTGATGGAAATCCAATTGCACCTTCCAAA...GGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | AGTGAGTTTTTGTGCCCTAAAAGGCCCTTTCTCCCTAAGTATTCTACTTACCCTTGCCTTTCCCTCCTTTaGAGCGAGATTTCCGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: SEFLCPKRPFLPKYSTYPCLSLL*SEISET Trigger: GGTTTCGGAAATCTCGCTTCAAAGGAGGGAAAGGCA...AGGGTAAGTAGAATACTTAGGGAGAAAGGGCCTTTTAGGGCACAAAAACTCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | ACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCAAGGTAAATCTACATTaGTGGAGTCTTCTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TIHSPVLHQGQGVCISWTKVNLH*WSLLLH Trigger: ATGAAGAAGAAGACTCCAGCAATGTAGATTTACCTT...GGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | AGTGAGTTTTTGTGCCCTAAAAGGCCCTTTCTCCCTAAGTATTCTACTTACCCTCGCAGGTCTATCAACTaGTGTGGAGTGAGGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SEFLCPKRPFLPKYSTYPRRSIN*CGVRLV Trigger: AACCAACCTCACTCCACAGCAGTTGATAGACCTGCG...AGGGTAAGTAGAATACTTAGGGAGAAAGGGCCTTTTAGGGCACAAAAACTCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR TCA 90 bp | TATGTAGCAACTAACTTGTATGGTAGAAACGACAGCCCTCAGGTCCCAGTAGTAATGGCCCTGCTGTGCTaGATTAGTTGGAACAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: YVATNLYGRNDSPQVPVVMALLC*ISWNRI Trigger: AATTCTGTTCCAACTAATTCAGCACAGCAGGGCCAT...TACTACTGGGACCTGAGGGCTGTCGTTTCTACCATACAAGTTAGTTGCTACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | TATGTAGCAACTAACTTGTATGGTAGAAACGACAGCCCTCAGGTCCCAGTAGTAAGGACACACAATAACTaGAATTGGTCCATCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YVATNLYGRNDSPQVPVVRTHNN*NWSITW Trigger: CCAGGTGATGGACCAATTGCAGTTATTGTGTGTCCT...TACTACTGGGACCTGAGGGCTGTCGTTTCTACCATACAAGTTAGTTGCTACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR GCA 90 bp | AGTGAGTTTTTGTGCCCTAAAAGGCCCTTTCTCCCTAAGTATTCTACTTACCCTCTGGGACTGAAAAGCTaGTTTCATTGCTGTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEFLCPKRPFLPKYSTYPLGLKS*FHCCEP Trigger: AGGCTCACAGCAATGAAAGCAGCTTTTCAGTCCCAG...AGGGTAAGTAGAATACTTAGGGAGAAAGGGCCTTTTAGGGCACAAAAACTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | AGTGAGTTTTTGTGCCCTAAAAGGCCCTTTCTCCCTAAGTATTCTACTTACCCTACGGCTACCACTTTCTaGATAACGGTATCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEFLCPKRPFLPKYSTYPTATTF*ITVSIS Trigger: GGAGATGGATACCGTTATCCAGAAAGTGGTAGCCGT...AGGGTAAGTAGAATACTTAGGGAGAAAGGGCCTTTTAGGGCACAAAAACTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | TATGTAGCAACTAACTTGTATGGTAGAAACGACAGCCCTCAGGTCCCAGTAGTAAGAGTTGTTGAAGCCTaGGATGTTCTTGGTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: YVATNLYGRNDSPQVPVVRVVEA*DVLGRT Trigger: AGTTCTACCAAGAACATCCCAGGCTTCAACAACTCT...TACTACTGGGACCTGAGGGCTGTCGTTTCTACCATACAAGTTAGTTGCTACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CCA 90 bp | TATGTAGCAACTAACTTGTATGGTAGAAACGACAGCCCTCAGGTCCCAGTAGTATCAGATTTCCTAATCTaGTGCATAAGTTGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YVATNLYGRNDSPQVPVVSDFLI*CISCSS Trigger: TGATGAACAACTTATGCACCAGATTAGGAAATCTGA...TACTACTGGGACCTGAGGGCTGTCGTTTCTACCATACAAGTTAGTTGCTACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS CCA 90 bp | TTGCACCCCGGCTCTCTCCGTGTCTGCCGGCACTTCCTCCATGCCTaGTCTCTCCATGTCGGTGGCCATCAGTATGACGGCTACCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHPGSLRVCRHFLHA*SLHVGGHQYDGYHF Trigger: AAAGTGGTAGCCGTCATACTGATGGCCACCGACATGGAGAGACCAGGCATGGAGGAAGTGCCGGCAGACACGGAGAGAGCCGGGGTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS GCA 90 bp | TTTCTCCATTCCTGCCATCATTTGCACCCCGGCTCTCTCCGTGTCTaGCGGCACTTCCTCCATGCCTGGTCTCTCCATGTCGGTGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLHSCHHLHPGSLRV*RHFLHAWSLHVGGH Trigger: ATGGCCACCGACATGGAGAGACCAGGCATGGAGGAAGTGCCGGCAGACACGGAGAGAGCCGGGGTGCAAATGATGGCAGGAATGGAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 90 bp | GACCTGGGGTACATACAACAATCTCTGCCCCTTCCTGAAGGGCCTTaGCCTGCTCCCACATGCTCCCTCCTCCATACACGGCCACTGATC | + |
|
Preference number: 5 (lower is better) Translates to: DLGYIQQSLPLPEGP*PAPTCSLLHTRPLI Trigger: GATCAGTGGCCGTGTATGGAGGAGGGAGCATGTGGGAGCAGGCCAAGGCCCTTCAGGAAGGGGCAGAGATTGTTGTATGTACCCCAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS-3UTR CAA 90 bp | ACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCCAACCCCATTCCTGCCATCATTaGCACCCCGGCTCTCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TLQFSTKGRGSVYLGPQPHSCHH*HPGSLR Trigger: ACGGAGAGAGCCGGGGTGCAAATGATGGCAGGAATG...GGGTTGGGGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS TCA 90 bp | GGCCTTGGCCTGCTCCCACATGCTCCCTCCTCCATACACGGCCACTaGTCGAAGATTATACGCTTTCCCAAACCGCTTACACTCTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLGLLPHAPSSIHGH*SKIIRFPKPLTLCV Trigger: CACGCAGAGTGTAAGCGGTTTGGGAAAGCGTATAATCTTCGATCAGTGGCCGTGTATGGAGGAGGGAGCATGTGGGAGCAGGCCAAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS TCA 90 bp | TGGCGCCCACCATCTCCATGCCGATTGCCACCATCTCCATGGCTATaGCGGCTACCACCCCGGTTCTCAGTATATCTCTCTCTCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WRPPSPCRLPPSPWL*RLPPRFSVYLSLFP Trigger: TGGGAAGAGAGAGAGATATACTGAGAACCGGGGTGGTAGCCGTCATAGCCATGGAGATGGTGGCAATCGGCATGGAGATGGTGGGCGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 90 bp | CCAAATCCAGAAGAAGAGCTGGCTGCCCCAAAGGCACTATGGGACTaGTGTGGCAGTTTGGCTTCCTCCTTCTTCCCAGCACTGATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PNPEEELAAPKALWD*CGSLASSFFPALIA Trigger: TGCTATCAGTGCTGGGAAGAAGGAGGAAGCCAAACTGCCACAGCAGTCCCATAGTGCCTTTGGGGCAGCCAGCTCTTCTTCTGGATTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 90 bp | AAGCTGTGGTGGAGCAGACTTTCCAAATCCAGAAGAAGAGCTGGCTaGCCCAAAGGCACTATGGGACTGCTGTGGCAGTTTGGCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KLWWSRLSKSRRRAG*PKGTMGLLWQFGFL Trigger: GAGGAAGCCAAACTGCCACAGCAGTCCCATAGTGCCTTTGGGGCAGCCAGCTCTTCTTCTGGATTTGGAAAGTCTGCTCCACCACAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 90 bp | GACGGCTACCACCCCGGTTCTCAGTATATCTCTCTCTCTTCCCATTaGCACCCCCAATCCCTTCACGGCTGTTATTCCCTGAAGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DGYHPGSQYISLSSH*HPQSLHGCYSLKLC Trigger: ACACAGCTTCAGGGAATAACAGCCGTGAAGGGATTGGGGGTGGCAATGGGAAGAGAGAGAGATATACTGAGAACCGGGGTGGTAGCCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCCTCCTTAGAAACATGTaGGTTGGCTCCTTCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSYVSQGWKQSGEPERSGLLRNM*VGSFQV Trigger: AACCTGGAAGGAGCCAACCAACATGTTTCTAAGGAG...GCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 90 bp | AAGGAAGCTGTGGTGGAGCAGACTTTCCAAATCCAGAAGAAGAGCTaGCTGCCCCAAAGGCACTATGGGACTGCTGTGGCAGTTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KEAVVEQTFQIQKKS*LPQRHYGTAVAVWL Trigger: AAGCCAAACTGCCACAGCAGTCCCATAGTGCCTTTGGGGCAGCCAGCTCTTCTTCTGGATTTGGAAAGTCTGCTCCACCACAGCTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | GCTGTCTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTTGCTGTGGAGTGAGGTaGGTTATCTCCTCATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AVFPTCLRAGNSLGNLSACCGVR*VISSCS Trigger: TGAACATGAGGAGATAACCAACCTCACTCCACAGCA...AGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | AGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGCACCCTGACACTGTATaGGGGTCGGCTGTGTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: RYNPLSSSPPRAGGLYILHPDTV*GSAVCT Trigger: AGTACACACAGCCGACCCCAATACAGTGTCAGGGTG...CAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | AGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGCTCTCTCTCTTCCCATaGCCACCCCCAATCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RYNPLSSSPPRAGGLYILLSLFP*PPPIPS Trigger: TGAAGGGATTGGGGGTGGCAATGGGAAGAGAGAGAG...CAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS TCA 90 bp | TCTCTTCCCATTGCCACCCCCAATCCCTTCACGGCTGTTATTCCCTaGAGCTGTGTTGTTGACTCCTTGGGCTCCAATAGAAGGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLPIATPNPFTAVIP*SCVVDSLGSNRRVG Trigger: ACCTACCCTTCTATTGGAGCCCAAGGAGTCAACAACACAGCTTCAGGGAATAACAGCCGTGAAGGGATTGGGGGTGGCAATGGGAAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 90 bp | TCCACCAGACGCCGAGTCAGCCAGTTCCATTTACTGGGTCCGGAATaGAGAATCTCCACAATCTGTGTCACATCTTCATTCGCCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: STRRRVSQFHLLGPE*RISTICVTSSFASP Trigger: TGGAGAGGCGAATGAAGATGTGACACAGATTGTGGAGATTCTCCATTCCGGACCCAGTAAATGGAACTGGCTGACTCGGCGTCTGGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | GCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCATCTTCCCTGCAAACATCTACCAGGCATTCTGCATaGCAAGATCTAAGAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGNSLGNLSAQASSLQTSTRHSA*QDLRAP Trigger: AGGAGCTCTTAGATCTTGCAATGCAGAATGCCTGGT...AGATGTTTGCAGGGAAGATGCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | GCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCATCTTCCCTGCAAACATCTTTGCCTTTCCCTCCTTaGAAGCGAGATTTCCGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AGNSLGNLSAQASSLQTSLPFPP*KRDFRN Trigger: GTTTCGGAAATCTCGCTTCAAAGGAGGGAAAGGCAA...AGATGTTTGCAGGGAAGATGCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | AGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGAAGCCTGGGATGTTCTaGGTAGAACTGGTCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RYNPLSSSPPRAGGLYILKPGMF*VELVMG Trigger: CCCCATGACCAGTTCTACCAAGAACATCCCAGGCTT...CAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | GCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCATCTTCCCTGCAAACATCTTGTGTTGTTGACTCCTaGGGCTCCAATAGAAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AGNSLGNLSAQASSLQTSCVVDS*GSNRRV Trigger: TACCCTTCTATTGGAGCCCAAGGAGTCAACAACACA...AGATGTTTGCAGGGAAGATGCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | GCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCATCTTCCCTGCAAACATCTGGTGTCTTATCTGTCTaGCTGTCCACTTTGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: AGNSLGNLSAQASSLQTSGVLSV*LSTLSI Trigger: GATGGACAAAGTGGACAGCAAGACAGATAAGACACC...AGATGTTTGCAGGGAAGATGCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | GCTGTCTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTGCTAGCTCTTCAGCATaGGCTTTCTTAGTAACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AVFPTCLRAGNSLGNLSAASSSA*AFLVTN Trigger: GTTTGTTACTAAGAAAGCCAATGCTGAAGAGCTAGC...AGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | CCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTAGGTCACCAGCAAAATaGCTGTCCTTTGGAGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PDEGTIHSPVLHQGQGVCRSPAK*LSFGVN Trigger: ATTGACTCCAAAGGACAGCAATTTTGCTGGTGACCT...ACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | AGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGCCTGAAGCTGTGTTGTaGACTCCTTGGGCTCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: RYNPLSSSPPRAGGLYILPEAVL*TPWAPI Trigger: TATTGGAGCCCAAGGAGTCAACAACACAGCTTCAGG...CAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 90 bp | AGCTGTGTTGTTGACTCCTTGGGCTCCAATAGAAGGGTAGGTCACTaGGGCACTACTGATATTCCCAGAGTTGTTGAAGCCTGGGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SCVVDSLGSNRRVGH*GTTDIPRVVEAWDV Trigger: AACATCCCAGGCTTCAACAACTCTGGGAATATCAGTAGTGCCCCAGTGACCTACCCTTCTATTGGAGCCCAAGGAGTCAACAACACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTACGTGTCTCAGGGCTGGAAACAGTCTGGGGAACCTGAGCGCTCAGGCAATCTGGTGCATAAGTaGTTCATCAAACCCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LSYVSQGWKQSGEPERSGNLVHK*FIKPKM Trigger: CATTTTGGGTTTGATGAACAACTTATGCACCAGATT...GCCTGAGCGCTCAGGTTCCCCAGACTGTTTCCAGCCCTGAGACACGTAGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 90 bp | GTTGGTTGGCTCCTTCCAGGTTCCGTACAAGGTCACCAGCAAAATTaGTGTCCTTTGGAGTCAATAAGGTATAGGCTACACCCTTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VGWLLPGSVQGHQQN*CPLESIRYRLHPSH Trigger: GTGAGAAGGGTGTAGCCTATACCTTATTGACTCCAAAGGACAGCAATTTTGCTGGTGACCTTGTACGGAACCTGGAAGGAGCCAACCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 90 bp | GTGCATAAGTTGTTCATCAAACCCAAAATGAGCAAAGCTACTTCCTaGTCTGGGAGGTGCAGCACCAGAGACCCGAAGGTTGAGCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: VHKLFIKPKMSKATS*SGRCSTRDPKVELM Trigger: CATAAGCTCAACCTTCGGGTCTCTGGTGCTGCACCTCCCAGACCAGGAAGTAGCTTTGCTCATTTTGGGTTTGATGAACAACTTATGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 90 bp | CACTTGCCCCTGCAGAAGAGGTTCCGGCCTTCTGATTACTTAAACTaGCTGCAACAAAGTGACTCTTGTACTGGGACTGAAAAGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HLPLQKRFRPSDYLN*LQQSDSCTGTEKLL Trigger: AAGCAGCTTTTCAGTCCCAGTACAAGAGTCACTTTGTTGCAGCCAGTTTAAGTAATCAGAAGGCCGGAACCTCTTCTGCAGGGGCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | CCAGATGAAGGTACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTTTTTGGAAGGTGCAATaGGATTTCCATCACTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PDEGTIHSPVLHQGQGVCFWKVQ*DFHHCH Trigger: ATGACAGTGATGGAAATCCAATTGCACCTTCCAAAA...ACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGTACCTTCATCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 90 bp | AAAGTTGGCCCGTTTAGATCCAATTTTGTAGAAAGAAGGAAGCTGTaGTGGAGCAGACTTTCCAAATCCAGAAGAAGAGCTGGCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KVGPFRSNFVERRKL*WSRLSKSRRRAGCP Trigger: GGGGCAGCCAGCTCTTCTTCTGGATTTGGAAAGTCTGCTCCACCACAGCTTCCTTCTTTCTACAAAATTGGATCTAAACGGGCCAACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | ACAATCCACTCTCCAGTTCTCCACCAAGGGCAGGGGGTCTGTATATCTTGGACCCAAAATTGCTGTCCTTaGGAGTCAATAAGGTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: TIHSPVLHQGQGVCISWTQNCCP*ESIRYR Trigger: CCTATACCTTATTGACTCCAAAGGACAGCAATTTTG...GGTCCAAGATATACAGACCCCCTGCCCTTGGTGGAGAACTGGAGAGTGGATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | TATGTAGCAACTAACTTGTATGGTAGAAACGACAGCCCTCAGGTCCCAGTAGTATTCCCTGAAGCTGTGTaGTTGACTCCTTGGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YVATNLYGRNDSPQVPVVFPEAV*LTPWAP Trigger: TGGAGCCCAAGGAGTCAACAACACAGCTTCAGGGAA...TACTACTGGGACCTGAGGGCTGTCGTTTCTACCATACAAGTTAGTTGCTACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | TATGTAGCAACTAACTTGTATGGTAGAAACGACAGCCCTCAGGTCCCAGTAGTAGTCTTGCTGTCCACTTaGTCCATCCTGCTGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: YVATNLYGRNDSPQVPVVVLLST*SILLLS Trigger: GGATAGCAGCAGGATGGACAAAGTGGACAGCAAGAC...TACTACTGGGACCTGAGGGCTGTCGTTTCTACCATACAAGTTAGTTGCTACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS TCA 90 bp | TCAGATTTCCTAATCTGGTGCATAAGTTGTTCATCAAACCCAAAATaGGCAAAGCTACTTCCTGGTCTGGGAGGTGCAGCACCAGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: SDFLIWCISCSSNPK*AKLLPGLGGAAPET Trigger: GGTCTCTGGTGCTGCACCTCCCAGACCAGGAAGTAGCTTTGCTCATTTTGGGTTTGATGAACAACTTATGCACCAGATTAGGAAATCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 90 bp | GCCTATCTCCCATGGCTCCTGTGGAGGGCTTGTAGGCTTCATAATTaGTCATTACATTGTTATTATTTCCTCGGTCCGAATTCTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AYLPWLLWRACRLHN*SLHCYYFLGPNSQS Trigger: GCTCTGAGAATTCGGACCGAGGAAATAATAACAATGTAATGAGCAATTATGAAGCCTACAAGCCCTCCACAGGAGCCATGGGAGATAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 90 bp | CAGGCATTCTGCATTGCAAGATCTAAGAGCTCCTTAGAAACATGTTaGTTGGCTCCTTCCAGGTTCCGTACAAGGTCACCAGCAAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: QAFCIARSKSSLETC*LAPSRFRTRSPAKL Trigger: CAATTTTGCTGGTGACCTTGTACGGAACCTGGAAGGAGCCAACCAACATGTTTCTAAGGAGCTCTTAGATCTTGCAATGCAGAATGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 90 bp | ATTGTCCTCTTCTTCCTCCTGAACCACCCCAGCAGTTGGGTTCTCTaGCATGTATCGAAAATAAGCTTCTTGGTCATCTTCCTCTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: IVLFFLLNHPSSWVL*HVSKISFLVIFLFN Trigger: ATTGAAGAGGAAGATGACCAAGAAGCTTATTTTCGATACATGGCAGAGAACCCAACTGCTGGGGTGGTTCAGGAGGAAGAAGAGGACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 90 bp | ATACTCCAAATTGTCCTCTTCTTCCTCCTGAACCACCCCAGCAGTTaGGTTCTCTGCCATGTATCGAAAATAAGCTTCTTGGTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILQIVLFFLLNHPSS*VLCHVSKISFLVIF Trigger: GAAGATGACCAAGAAGCTTATTTTCGATACATGGCAGAGAACCCAACTGCTGGGGTGGTTCAGGAGGAAGAAGAGGACAATTTGGAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | AGTGAGTTTTTGTGCCCTAAAAGGCCCTTTCTCCCTAAGTATTCTACTTACCCTCAGGACGAACATGACTaGCTATGGACCGAACCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SEFLCPKRPFLPKYSTYPQDEHD*LWTEPD Trigger: ATCAGGTTCGGTCCATAGCAAGTCATGTTCGTCCTG...AGGGTAAGTAGAATACTTAGGGAGAAAGGGCCTTTTAGGGCACAAAAACTCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 90 bp | TTCTTGGTAGAACTGGTCATGGGGTTGTCAGGACTATTATGGCCCTaGTGTGCTGAATTAGTTGGAACAGAATTTAAGCTTCCTGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: FLVELVMGLSGLLWP*CAELVGTEFKLPAL Trigger: TAGTGCAGGAAGCTTAAATTCTGTTCCAACTAATTCAGCACAGCAGGGCCATAATAGTCCTGACAACCCCATGACCAGTTCTACCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS-3UTR CAA 90 bp | AGTGAGTTTTTGTGCCCTAAAAGGCCCTTTCTCCCTAAGTATTCTACTTACCCTTCGAAAATAAGCTTCTaGGTCATCTTCCTCTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SEFLCPKRPFLPKYSTYPSKISF*VIFLFN Trigger: ATTGAAGAGGAAGATGACCAAGAAGCTTATTTTCGA...AGGGTAAGTAGAATACTTAGGGAGAAAGGGCCTTTTAGGGCACAAAAACTCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 72 bp | GGCTCTCTCCGTGTCTGCCGGCACTTCCTCCATGCCTaGTCTCTCCATGTCGGTGGCCATCAGTATGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSLRVCRHFLHA*SLHVGGHQYDG Trigger: GCCGTCATACTGATGGCCACCGACATGGAGAGACCAGGCATGGAGGAAGTGCCGGCAGACACGGAGAGAGCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 72 bp | CTGCCCCTTCCTGAAGGGCCTTGGCCTGCTCCCACATaGTCCCTCCTCCATACACGGCCACTGATCGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LPLPEGPWPAPT*SLLHTRPLIED Trigger: ATCTTCGATCAGTGGCCGTGTATGGAGGAGGGAGCATGTGGGAGCAGGCCAAGGCCCTTCAGGAAGGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 72 bp | GAAGAAGAGCTGGCTGCCCCAAAGGCACTATGGGACTaGTGTGGCAGTTTGGCTTCCTCCTTCTTCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: EEELAAPKALWD*CGSLASSFFPA Trigger: TGCTGGGAAGAAGGAGGAAGCCAAACTGCCACAGCAGTCCCATAGTGCCTTTGGGGCAGCCAGCTCTTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 72 bp | TACATACAACAATCTCTGCCCCTTCCTGAAGGGCCTTaGCCTGCTCCCACATGCTCCCTCCTCCATACACGG | + |
|
Preference number: 6 (lower is better) Translates to: YIQQSLPLPEGP*PAPTCSLLHTR Trigger: CCGTGTATGGAGGAGGGAGCATGTGGGAGCAGGCCAAGGCCCTTCAGGAAGGGGCAGAGATTGTTGTATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS TCA 72 bp | CCATCTCCATGCCGATTGCCACCATCTCCATGGCTATaGCGGCTACCACCCCGGTTCTCAGTATATCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPCRLPPSPWL*RLPPRFSVYLS Trigger: AGAGAGATATACTGAGAACCGGGGTGGTAGCCGTCATAGCCATGGAGATGGTGGCAATCGGCATGGAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 72 bp | CACCCCGGTTCTCAGTATATCTCTCTCTCTTCCCATTaGCACCCCCAATCCCTTCACGGCTGTTATTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HPGSQYISLSSH*HPQSLHGCYSL Trigger: CAGGGAATAACAGCCGTGAAGGGATTGGGGGTGGCAATGGGAAGAGAGAGAGATATACTGAGAACCGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 72 bp | AATCCAGAAGAAGAGCTGGCTGCCCCAAAGGCACTATaGGACTGCTGTGGCAGTTTGGCTTCCTCCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NPEEELAAPKAL*DCCGSLASSFF Trigger: GAAGAAGGAGGAAGCCAAACTGCCACAGCAGTCCCATAGTGCCTTTGGGGCAGCCAGCTCTTCTTCTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS TCA 72 bp | CTGCTCCCACATGCTCCCTCCTCCATACACGGCCACTaGTCGAAGATTATACGCTTTCCCAAACCGCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: LLPHAPSSIHGH*SKIIRFPKPLT Trigger: TGTAAGCGGTTTGGGAAAGCGTATAATCTTCGATCAGTGGCCGTGTATGGAGGAGGGAGCATGTGGGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 72 bp | TGGAGCAGACTTTCCAAATCCAGAAGAAGAGCTGGCTaGCCCAAAGGCACTATGGGACTGCTGTGGCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: WSRLSKSRRRAG*PKGTMGLLWQF Trigger: AAACTGCCACAGCAGTCCCATAGTGCCTTTGGGGCAGCCAGCTCTTCTTCTGGATTTGGAAAGTCTGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 72 bp | ACTCCACCAGACGCCGAGTCAGCCAGTTCCATTTACTaGGTCCGGAATGGAGAATCTCCACAATCTGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TPPDAESASSIY*VRNGESPQSVS Trigger: TGACACAGATTGTGGAGATTCTCCATTCCGGACCCAGTAAATGGAACTGGCTGACTCGGCGTCTGGTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CAA 90 bp | ATGAATGCCTCTAAGGGGTCATCATCACTGTCAGAGTCTGCGGGCTaGGAATGGAACTGCTGGCGGGTAGGTGAGTTTTCAGCAGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: MNASKGSSSLSESAG*EWNCWRVGEFSAGM Trigger: CATTCCTGCTGAAAACTCACCTACCCGCCAGCAGTTCCATTCCAAGCCCGCAGACTCTGACAGTGATGATGACCCCTTAGAGGCATTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CAA 90 bp | GGGGCACTACTGATATTCCCAGAGTTGTTGAAGCCTGGGATGTTCTaGGTAGAACTGGTCATGGGGTTGTCAGGACTATTATGGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GALLIFPELLKPGMF*VELVMGLSGLLWPC Trigger: GCAGGGCCATAATAGTCCTGACAACCCCATGACCAGTTCTACCAAGAACATCCCAGGCTTCAACAACTCTGGGAATATCAGTAGTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 72 bp | TTGTTCATCAAACCCAAAATGAGCAAAGCTACTTCCTaGTCTGGGAGGTGCAGCACCAGAGACCCGAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LFIKPKMSKATS*SGRCSTRDPKV Trigger: AACCTTCGGGTCTCTGGTGCTGCACCTCCCAGACCAGGAAGTAGCTTTGCTCATTTTGGGTTTGATGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CCA 72 bp | TGGGGCACTACTGATATTCCCAGAGTTGTTGAAGCCTaGGATGTTCTTGGTAGAACTGGTCATGGGGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: WGTTDIPRVVEA*DVLGRTGHGVV Trigger: GACAACCCCATGACCAGTTCTACCAAGAACATCCCAGGCTTCAACAACTCTGGGAATATCAGTAGTGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS CAA 90 bp | CTCCTTCCAGGTTCCGTACAAGGTCACCAGCAAAATTGCTGTCCTTaGGAGTCAATAAGGTATAGGCTACACCCTTCTCACCAGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLPGSVQGHQQNCCP*ESIRYRLHPSHQLF Trigger: GAAGAGCTGGTGAGAAGGGTGTAGCCTATACCTTATTGACTCCAAAGGACAGCAATTTTGCTGGTGACCTTGTACGGAACCTGGAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 72 bp | ACCCGAAGGTTGAGCTTATGTCGCAGGTCTATCAACTaGTGTGGAGTGAGGTTGGTTATCTCCTCATGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TRRLSLCRRSIN*CGVRLVISSCS Trigger: TGAACATGAGGAGATAACCAACCTCACTCCACAGCAGTTGATAGACCTGCGACATAAGCTCAACCTTCGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 72 bp | TGTGTCACATCTTCATTCGCCTCTCCAATGTCTCCCTaGACCACTCGAATAGGGTCAATCAAGATGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CVTSSFASPMSP*TTRIGSIKMSL Trigger: CAGAGACATCTTGATTGACCCTATTCGAGTGGTGCAGGGAGACATTGGAGAGGCGAATGAAGATGTGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
||
| CDS GCA 72 bp | TGCAACAAAGTGACTCTTGTACTGGGACTGAAAAGCTaGTTTCATTGCTGTGAGCCTATCTCCCATGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CNKVTLVLGLKS*FHCCEPISHGS Trigger: GGAGCCATGGGAGATAGGCTCACAGCAATGAAAGCAGCTTTTCAGTCCCAGTACAAGAGTCACTTTGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS GCA 72 bp | GTGTCTTATCTGTCTTGCTGTCCACTTTGTCCATCCTaGTGCTATCCACCTTGGGGTCCATCTTGTTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: VSYLSCCPLCPS*CYPPWGPSCFH Trigger: GTGAAAACAAGATGGACCCCAAGGTGGATAGCAGCAGGATGGACAAAGTGGACAGCAAGACAGATAAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS CAA 72 bp | AAGCCTGGGATGTTCTTGGTAGAACTGGTCATGGGGTaGTCAGGACTATTATGGCCCTGCTGTGCTGAATTA | + |
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Preference number: 6 (lower is better) Translates to: KPGMFLVELVMG*SGLLWPCCAEL Trigger: TAATTCAGCACAGCAGGGCCATAATAGTCCTGACAACCCCATGACCAGTTCTACCAAGAACATCCCAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS CAA 90 bp | TGGGGTCGGCTGTGTGTACTCAGATTTCCTAATCTGGTGCATAAGTaGTTCATCAAACCCAAAATGAGCAAAGCTACTTCCTGGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: WGRLCVLRFPNLVHK*FIKPKMSKATSWSG Trigger: CCCAGACCAGGAAGTAGCTTTGCTCATTTTGGGTTTGATGAACAACTTATGCACCAGATTAGGAAATCTGAGTACACACAGCCGACCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS GCA 72 bp | TTCTTCCTCCTGAACCACCCCAGCAGTTGGGTTCTCTaGCATGTATCGAAAATAAGCTTCTTGGTCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: FFLLNHPSSWVL*HVSKISFLVIF Trigger: GAAGATGACCAAGAAGCTTATTTTCGATACATGGCAGAGAACCCAACTGCTGGGGTGGTTCAGGAGGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS GCA 72 bp | TCGAAGATTATACGCTTTCCCAAACCGCTTACACTCTaGGTGGATCTGTTGACAAAGCTCCCTAGTAGGACA | + |
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Preference number: 6 (lower is better) Translates to: SKIIRFPKPLTL*VDLLTKLPSRT Trigger: TGTCCTACTAGGGAGCTTTGTCAACAGATCCACGCAGAGTGTAAGCGGTTTGGGAAAGCGTATAATCTTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS GCA 72 bp | CCGGCCAATCCTGTGAGTGTGCGTATCAATGTCCCGTaGTACATCATAGTTAATGACTGTCTTAATGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PANPVSVRINVP*YIIVNDCLNGR Trigger: CCTTCCATTAAGACAGTCATTAACTATGATGTAGCACGGGACATTGATACGCACACTCACAGGATTGGCCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS GCA 72 bp | CTCCTTCCAGGTTCCGTACAAGGTCACCAGCAAAATTaGTGTCCTTTGGAGTCAATAAGGTATAGGCTACAC | + |
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Preference number: 6 (lower is better) Translates to: LLPGSVQGHQQN*CPLESIRYRLH Trigger: GTGTAGCCTATACCTTATTGACTCCAAAGGACAGCAATTTTGCTGGTGACCTTGTACGGAACCTGGAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS CCA 72 bp | ATTGTCCTCTTCTTCCTCCTGAACCACCCCAGCAGTTaGGTTCTCTGCCATGTATCGAAAATAAGCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: IVLFFLLNHPSS*VLCHVSKISFL Trigger: CAAGAAGCTTATTTTCGATACATGGCAGAGAACCCAACTGCTGGGGTGGTTCAGGAGGAAGAAGAGGACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS CCA 72 bp | CTGCAGAAGAGGTTCCGGCCTTCTGATTACTTAAACTaGCTGCAACAAAGTGACTCTTGTACTGGGACTGAA | + |
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Preference number: 6 (lower is better) Translates to: LQKRFRPSDYLN*LQQSDSCTGTE Trigger: TTCAGTCCCAGTACAAGAGTCACTTTGTTGCAGCCAGTTTAAGTAATCAGAAGGCCGGAACCTCTTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS CAA 72 bp | GGTTCCGTACAAGGTCACCAGCAAAATTGCTGTCCTTaGGAGTCAATAAGGTATAGGCTACACCCTTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GSVQGHQQNCCP*ESIRYRLHPSH Trigger: GTGAGAAGGGTGTAGCCTATACCTTATTGACTCCAAAGGACAGCAATTTTGCTGGTGACCTTGTACGGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS CAA 90 bp | CATACTCCAAATTGTCCTCTTCTTCCTCCTGAACCACCCCAGCAGTaGGGTTCTCTGCCATGTATCGAAAATAAGCTTCTTGGTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: HTPNCPLLPPEPPQQ*GSLPCIENKLLGHL Trigger: AAGATGACCAAGAAGCTTATTTTCGATACATGGCAGAGAACCCAACTGCTGGGGTGGTTCAGGAGGAAGAAGAGGACAATTTGGAGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS TCA 72 bp | CTAATCTGGTGCATAAGTTGTTCATCAAACCCAAAATaGGCAAAGCTACTTCCTGGTCTGGGAGGTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LIWCISCSSNPK*AKLLPGLGGAA Trigger: TGCTGCACCTCCCAGACCAGGAAGTAGCTTTGCTCATTTTGGGTTTGATGAACAACTTATGCACCAGATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS GCA 72 bp | CTGTTGACAAAGCTCCCTAGTAGGACACACAATAACTaGAATTGGTCCATCACCTGGTTCCAATTCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLTKLPSRTHNN*NWSITWFQFLL Trigger: CAGAAGGAATTGGAACCAGGTGATGGACCAATTGCAGTTATTGTGTGTCCTACTAGGGAGCTTTGTCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS CCA 72 bp | ACTATCCCATCGGCTTTTCTTTCTTTTGGGTGGCTCTaGAACAGCAAAGCCATCAGGTGTCTTATCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: TIPSAFLSFGWL*NSKAIRCLICL Trigger: AAGACAGATAAGACACCTGATGGCTTTGCTGTTCCAGAGCCACCCAAAAGAAAGAAAAGCCGATGGGATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS GCA 72 bp | GAACTGGTCATGGGGTTGTCAGGACTATTATGGCCCTaGTGTGCTGAATTAGTTGGAACAGAATTTAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: ELVMGLSGLLWP*CAELVGTEFKL Trigger: AAGCTTAAATTCTGTTCCAACTAATTCAGCACAGCAGGGCCATAATAGTCCTGACAACCCCATGACCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS CCA 72 bp | AAGGTTGAGCTTATGTCGCAGGTCTATCAACTGCTGTaGAGTGAGGTTGGTTATCTCCTCATGTTCATTGTA | + |
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Preference number: 6 (lower is better) Translates to: KVELMSQVYQLL*SEVGYLLMFIV Trigger: TACAATGAACATGAGGAGATAACCAACCTCACTCCACAGCAGTTGATAGACCTGCGACATAAGCTCAACCTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS CCA 72 bp | AGAGAGTTTGTCTGTCAGGACGAACATGACTTGCTATaGACCGAACCTGATACTCAAATCCCATGTCAAACA | + |
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Preference number: 6 (lower is better) Translates to: REFVCQDEHDLL*TEPDTQIPCQT Trigger: TGTTTGACATGGGATTTGAGTATCAGGTTCGGTCCATAGCAAGTCATGTTCGTCCTGACAGACAAACTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS CCA 72 bp | CCGTTTAGATCCAATTTTGTAGAAAGAAGGAAGCTGTaGTGGAGCAGACTTTCCAAATCCAGAAGAAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: PFRSNFVERRKL*WSRLSKSRRRA Trigger: AGCTCTTCTTCTGGATTTGGAAAGTCTGCTCCACCACAGCTTCCTTCTTTCTACAAAATTGGATCTAAACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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| CDS TCA 72 bp | TGGCCAACTTTTCAATCTTCTTTCGAAAAGTTGCACTaGATAAGAGAGTTTGTCTGTCAGGACGAACATGAC | + |
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Preference number: 6 (lower is better) Translates to: WPTFQSSFEKLH*IREFVCQDEHD Trigger: GTCATGTTCGTCCTGACAGACAAACTCTCTTATTCAGTGCAACTTTTCGAAAGAAGATTGAAAAGTTGGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021046.6 |
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