Pregenerated sensors for DDX39B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019432Ensembl transcript IDs: ENSMUST00000068056.12, ENSMUST00000172549.2, ENSMUST00000173731.8
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCCTCGGTCCCATCTaGCCCAGCGGCTGTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYSLGPI*PSGCLH Trigger: GTGGAGACAGCCGCTGGGGCAGATGGGACCGAGGCT...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR GCA 90 bp | CGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCAGCCTCGGTCCCATCTaGCCCAGCGGCTGTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RCRVGRQCLLLTRVLFYSSLGPI*PSGCLH Trigger: GTGGAGACAGCCGCTGGGGCAGATGGGACCGAGGCT...GCTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR GCA 90 bp | CGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCGCTGGGCCAGGGCGATaGAGCGCTGCACGGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: RCRVGRQCLLLTRVLFYSAGPGR*SAARTS Trigger: TGAAGTCCGTGCAGCGCTGCATCGCCCTGGCCCAGC...GCTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR GCA 90 bp | CGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCTGGCCAAGCCCTTGGTaGCAAACCGGCCCGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RCRVGRQCLLLTRVLFYSWPSPW*QTGPLW Trigger: CCAGAGCGGGCCGGTTTGGCACCAAGGGCTTGGCCA...GCTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACCAAACCGGCCCGCTCTaGCCACCCTGTGCAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYQTGPL*PPCAGR Trigger: CCTACCTGCACAGGGTGGCCAGAGCGGGCCGGTTTG...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | CGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCCAAACCGGCCCGCTCTaGCCACCCTGTGCAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RCRVGRQCLLLTRVLFYSQTGPL*PPCAGR Trigger: CCTACCTGCACAGGGTGGCCAGAGCGGGCCGGTTTG...GCTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR GCA 90 bp | TCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGAGCCTCGGTCCCATCTaGCCCAGCGGCTGTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SVSGGAAVSPPDPCPLLQSLGPI*PSGCLH Trigger: GTGGAGACAGCCGCTGGGGCAGATGGGACCGAGGCT...CTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR GCA 90 bp | TCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGGCTGGGCCAGGGCGATaGAGCGCTGCACGGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: SVSGGAAVSPPDPCPLLQAGPGR*SAARTS Trigger: TGAAGTCCGTGCAGCGCTGCATCGCCCTGGCCCAGC...CTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR GCA 90 bp | TCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGTGGCCAAGCCCTTGGTaGCAAACCGGCCCGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SVSGGAAVSPPDPCPLLQWPSPW*QTGPLW Trigger: CCAGAGCGGGCCGGTTTGGCACCAAGGGCTTGGCCA...CTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | TCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCAAACCGGCCCGCTCTaGCCACCCTGTGCAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SVSGGAAVSPPDPCPLLQQTGPL*PPCAGR Trigger: CCTACCTGCACAGGGTGGCCAGAGCGGGCCGGTTTG...CTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR TCA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGACGTAGGAGCCCTTaGCGTCTTTCTTGGCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYRRRSP*RLSWRE Trigger: CTCCCGCCAAGAAAGACGTCAAGGGCTCCTACGTCT...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | CGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCATGCCTGACTTGGCCTaGCACAGGACATCCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: RCRVGRQCLLLTRVLFYSMPDLA*HRTSIP Trigger: GGGGATGGATGTCCTGTGCCAGGCCAAGTCAGGCAT...GCTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | CGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCCCAGCTGCTGCAGTGTaGCCAGGACAAACACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RCRVGRQCLLLTRVLFYSPAAAV*PGQTLL Trigger: CAGCAGTGTTTGTCCTGGCCACACTGCAGCAGCTGG...GCTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR TCA 90 bp | TCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGAGACGTAGGAGCCCTTaGCGTCTTTCTTGGCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SVSGGAAVSPPDPCPLLQRRRSP*RLSWRE Trigger: CTCCCGCCAAGAAAGACGTCAAGGGCTCCTACGTCT...CTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR GCA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGGGCGATGCAGCGCTaGACGGACTTCACAAAGATC | + |
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Preference number: 4 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYRAMQR*TDFTKI Trigger: GATCTTTGTGAAGTCCGTGCAGCGCTGCATCGCCCT...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACCATCCATCCCCAGAATaGCCTGCGGGATGCACTCAT | + |
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Preference number: 4 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYHPSPE*PAGCTH Trigger: ATGAGTGCATCCCGCAGGCCATTCTGGGGATGGATG...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | CGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCCATCCATCCCCAGAATaGCCTGCGGGATGCACTCAT | + |
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Preference number: 4 (lower is better) Translates to: RCRVGRQCLLLTRVLFYSHPSPE*PAGCTH Trigger: ATGAGTGCATCCCGCAGGCCATTCTGGGGATGGATG...GCTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | TCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGATGCCTGACTTGGCCTaGCACAGGACATCCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: SVSGGAAVSPPDPCPLLQMPDLA*HRTSIP Trigger: GGGGATGGATGTCCTGTGCCAGGCCAAGTCAGGCAT...CTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | TCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCCAGCTGCTGCAGTGTaGCCAGGACAAACACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SVSGGAAVSPPDPCPLLQPAAAV*PGQTLL Trigger: CAGCAGTGTTTGTCCTGGCCACACTGCAGCAGCTGG...CTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | CGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCGAGAGCCTCTCCTCCTaGGGCATTCCACGATGGATA | + |
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Preference number: 4 (lower is better) Translates to: RCRVGRQCLLLTRVLFYSESLSS*GIPRWI Trigger: TATCCATCGTGGAATGCCCCAGGAGGAGAGGCTCTC...GCTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACGAGAGCCTCTCCTCCTaGGGCATTCCACGATGGATA | + |
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Preference number: 4 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYESLSS*GIPRWI Trigger: TATCCATCGTGGAATGCCCCAGGAGGAGAGGCTCTC...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR TCA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACCTCATGCTGGACCTCTaGTGGATGCTCAAAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYLMLDL*WMLKAT Trigger: TGTGGCTTTGAGCATCCATCAGAGGTCCAGCATGAG...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR GCA 90 bp | CGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCCACGCTCAATATCCATaGCTCGGCCAAACAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: RCRVGRQCLLLTRVLFYSHAQYP*LGQTGW Trigger: CCAACCTGTTTGGCCGAGGCATGGATATTGAGCGTG...GCTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR GCA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACCACGCTCAATATCCATaGCTCGGCCAAACAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYHAQYP*LGQTGW Trigger: CCAACCTGTTTGGCCGAGGCATGGATATTGAGCGTG...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACGGGATGCACTCATGCTaGACCTCTGATGGATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYGMHSC*TSDGCS Trigger: TGAGCATCCATCAGAGGTCCAGCATGAGTGCATCCC...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | CGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCGGGATGCACTCATGCTaGACCTCTGATGGATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RCRVGRQCLLLTRVLFYSGMHSC*TSDGCS Trigger: TGAGCATCCATCAGAGGTCCAGCATGAGTGCATCCC...GCTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | TCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCATCCATCCCCAGAATaGCCTGCGGGATGCACTCAT | + |
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Preference number: 4 (lower is better) Translates to: SVSGGAAVSPPDPCPLLQHPSPE*PAGCTH Trigger: ATGAGTGCATCCCGCAGGCCATTCTGGGGATGGATG...CTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR TCA 90 bp | TCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCTCATGCTGGACCTCTaGTGGATGCTCAAAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: SVSGGAAVSPPDPCPLLQLMLDL*WMLKAT Trigger: TGTGGCTTTGAGCATCCATCAGAGGTCCAGCATGAG...CTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | CGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCACAAAGATCACCACCTaGTTGAACTCGAGGACATCG | + |
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Preference number: 4 (lower is better) Translates to: RCRVGRQCLLLTRVLFYSTKITT*LNSRTS Trigger: CGATGTCCTCGAGTTCAACCAGGTGGTGATCTTTGT...GCTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CCA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACACAAAGATCACCACCTaGTTGAACTCGAGGACATCG | + |
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Preference number: 4 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYTKITT*LNSRTS Trigger: CGATGTCCTCGAGTTCAACCAGGTGGTGATCTTTGT...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR GCA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACATCTCCATAGGATCTTaGATGAACTTGCGGCAGACT | + |
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Preference number: 4 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYISIGS*MNLRQT Trigger: AGTCTGCCGCAAGTTCATGCAAGATCCTATGGAGAT...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS GCA 90 bp | GTAGGAGCCCTTGACGTCTTTCTTGGCGGGAGCCTCGGTCCCATCTaGCCCAGCGGCTGTCTCCACCTCGTCGTCTTCGTAGTCCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: VGALDVFLGGSLGPI*PSGCLHLVVFVVQE Trigger: CTCTTGGACTACGAAGACGACGAGGTGGAGACAGCCGCTGGGGCAGATGGGACCGAGGCTCCCGCCAAGAAAGACGTCAAGGGCTCCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CAA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACACCTCTTCGTCCTTCTaGATAGACAGACCGCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYTSSSF*IDRPPK Trigger: TTTTGGCGGTCTGTCTATCAAGAAGGACGAAGAGGT...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CAA 90 bp | TCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGGATCTCCATAGGATCTaGCATGAACTTGCGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: SVSGGAAVSPPDPCPLLQDLHRI*HELAAD Trigger: GTCTGCCGCAAGTTCATGCAAGATCCTATGGAGATC...CTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CAA 90 bp | TCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGACCTCTTCGTCCTTCTaGATAGACAGACCGCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: SVSGGAAVSPPDPCPLLQTSSSF*IDRPPK Trigger: TTTTGGCGGTCTGTCTATCAAGAAGGACGAAGAGGT...CTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CAA 90 bp | CGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAGCAAAAACACTGCCACCTaGACATTCGGCATGTACTTA | + |
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Preference number: 5 (lower is better) Translates to: RCRVGRQCLLLTRVLFYSKNTAT*TFGMYL Trigger: TAAGTACATGCCGAATGTCAAGGTGGCAGTGTTTTT...GCTGTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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| CDS-3UTR CAA 90 bp | CGTCGGTGTCGGGTGGGGCGGCAGTGTCTCCTCCTGACCCGTGTCCTCTTCTACAAAAACACTGCCACCTaGACATTCGGCATGTACTTA | + |
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Preference number: 5 (lower is better) Translates to: RRCRVGRQCLLLTRVLFYKNTAT*TFGMYL Trigger: TAAGTACATGCCGAATGTCAAGGTGGCAGTGTTTTT...GTAGAAGAGGACACGGGTCAGGAGGAGACACTGCCGCCCCACCCGACACCGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068056.12 ENSMUST00000172549.2 ENSMUST00000173731.8 |
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