Pregenerated sensors for DDX31 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026806Ensembl transcript IDs: ENSMUST00000113853.3
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGCTTGGCCAAAGGTGGGTGACTGTCTAGCACCGGCCGGCCCCTaGCTACTTTGTTTCGTTCGGGGCTCCTCCTCCAACAGGCGAGGA | + |
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Preference number: 1 (lower is better) Translates to: EAWPKVGDCLAPAGP*LLCFVRGSSSNRRG Trigger: TCCTCGCCTGTTGGAGGAGGAGCCCCGAACGAAACAAAGTAGGCAGGGGCCGGCCGGTGCTAGACAGTCACCCACCTTTGGCCAAGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR TCA 90 bp | TTGCTGTCCATGAGCAATCTCACAAGAAGCTTGGCCAAAGGTGGGTaGCTGTCTAGCACCGGCCGGCCCCTGCCTACTTTGTTTCGTTCG | + |
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Preference number: 1 (lower is better) Translates to: LLSMSNLTRSLAKGG*LSSTGRPLPTLFRS Trigger: CGAACGAAACAAAGTAGGCAGGGGCCGGCCGGTGCTAGACAGTCACCCACCTTTGGCCAAGCTTCTTGTGAGATTGCTCATGGACAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR TCA 90 bp | GGAGCTCCACTCATCCAGGCTGACACACAGAATGCTTGCTGTCCATaGGCAATCTCACAAGAAGCTTGGCCAAAGGTGGGTGACTGTCTA | + |
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Preference number: 1 (lower is better) Translates to: GAPLIQADTQNACCP*AISQEAWPKVGDCL Trigger: TAGACAGTCACCCACCTTTGGCCAAGCTTCTTGTGAGATTGCTCATGGACAGCAAGCATTCTGTGTGTCAGCCTGGATGAGTGGAGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR CCA 90 bp | GAGAAGGCGAGTAGTCTGTGGATAGGGAAGGAGAGGCAGCGCACATaGTGCTATGCTGTGCTTAAGGAAGAAGGAAGTGGCTTCCAACAT | + |
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Preference number: 1 (lower is better) Translates to: EKASSLWIGKERQRT*CYAVLKEEGSGFQH Trigger: ATGTTGGAAGCCACTTCCTTCTTCCTTAAGCACAGCATAGCACCATGTGCGCTGCCTCTCCTTCCCTATCCACAGACTACTCGCCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR CCA 90 bp | AAAGGCACAAGTCAATCAATTAGCCCAGAGAAGGCGAGTAGTCTGTaGATAGGGAAGGAGAGGCAGCGCACATGGTGCTATGCTGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: KGTSQSISPEKASSL*IGKERQRTWCYAVL Trigger: AAGCACAGCATAGCACCATGTGCGCTGCCTCTCCTTCCCTATCCACAGACTACTCGCCTTCTCTGGGCTAATTGATTGACTTGTGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR CCA 90 bp | GCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTaGATTCTGGGTCTAGGTCACACACAAAGACCTCAGATCCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: APGVLFQTSRKHNGV*ILGLGHTQRPQILK Trigger: CTTCAGGATCTGAGGTCTTTGTGTGTGACCTAGACCCAGAATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR GCA 90 bp | ACAACACTCATACGATACACATGTGGCTGCTTAATCTGGCAAGCTTaGCAGGAGCTCCACTCATCCAGGCTGACACACAGAATGCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: TTLIRYTCGCLIWQA*QELHSSRLTHRMLA Trigger: AGCAAGCATTCTGTGTGTCAGCCTGGATGAGTGGAGCTCCTGGCAAGCTTGCCAGATTAAGCAGCCACATGTGTATCGTATGAGTGTTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTGACTGTCTAGCACCGGCCGGCCCCTGCCTACTTTGTTTCGTTCGGGGCCAACAGGCGAGGATCTaGCCTCTTGAGAGTCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: VGDCLAPAGPCLLCFVRGQQARI*PLESLY Trigger: ATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTG...GCCCCGAACGAAACAAAGTAGGCAGGGGCCGGCCGGTGCTAGACAGTCACCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR-3UTR CCA 90 bp | CGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTCTAAGGCGAGTAGTCTGTaGATAGGGAAGGAGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: RSRGPLSNLSETQWCVDSKASSL*IGKERQ Trigger: CTGCCTCTCCTTCCCTATCCACAGACTACTCGCCTT...AGAATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR CAA 90 bp | TACAACACTCATACGATACACATGTGGCTGCTTAATCTGGCAAGCTaGCCAGGAGCTCCACTCATCCAGGCTGACACACAGAATGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: YNTHTIHMWLLNLAS*PGAPLIQADTQNAC Trigger: GCAAGCATTCTGTGTGTCAGCCTGGATGAGTGGAGCTCCTGGCAAGCTTGCCAGATTAAGCAGCCACATGTGTATCGTATGAGTGTTGTA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR-3UTR CCA 90 bp | CATGGCCAGGTTTTAACCCAAGGTAAAAGCCCTTGGGCCTTTCTAACAGAACATATCTCACAAGAAGCTTaGCCAAAGGTGGGTGACTGT | + |
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Preference number: 2 (lower is better) Translates to: HGQVLTQGKSPWAFLTEHISQEA*PKVGDC Trigger: ACAGTCACCCACCTTTGGCCAAGCTTCTTGTGAGAT...ATGTTCTGTTAGAAAGGCCCAAGGGCTTTTACCTTGGGTTAAAACCTGGCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR-3UTR GCA 90 bp | ATTCCAGTTTTTAACATCTTTTATCCTACAACACTCATACGATACACATGTGGCCAACCAAAAGAAGCTTaGTGGCTGGTGGTGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: IPVFNIFYPTTLIRYTCGQPKEA*WLVVSL Trigger: AAGGCTCACCACCAGCCAGCAAGCTTCTTTTGGTTG...GCCACATGTGTATCGTATGAGTGTTGTAGGATAAAAGATGTTAAAAACTGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR TCA 72 bp | GGGGCTCCTCCTCCAACAGGCGAGGATCTGCCCTCTTaGGAGTCTGTATTCAGGGAGCGGTGCCAGTTATTT | + |
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Preference number: 3 (lower is better) Translates to: GAPPPTGEDLPS*ESVFRERCQLF Trigger: AAATAACTGGCACCGCTCCCTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR TCA 72 bp | ATGAGCAATCTCACAAGAAGCTTGGCCAAAGGTGGGTaGCTGTCTAGCACCGGCCGGCCCCTGCCTACTTTG | + |
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Preference number: 3 (lower is better) Translates to: MSNLTRSLAKGG*LSSTGRPLPTL Trigger: CAAAGTAGGCAGGGGCCGGCCGGTGCTAGACAGTCACCCACCTTTGGCCAAGCTTCTTGTGAGATTGCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR CCA 72 bp | AGTAGTCTGTGGATAGGGAAGGAGAGGCAGCGCACATaGTGCTATGCTGTGCTTAAGGAAGAAGGAAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: SSLWIGKERQRT*CYAVLKEEGSG Trigger: GCCACTTCCTTCTTCCTTAAGCACAGCATAGCACCATGTGCGCTGCCTCTCCTTCCCTATCCACAGACTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR TCA 72 bp | CTCATCCAGGCTGACACACAGAATGCTTGCTGTCCATaGGCAATCTCACAAGAAGCTTGGCCAAAGGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: LIQADTQNACCP*AISQEAWPKVG Trigger: ACCCACCTTTGGCCAAGCTTCTTGTGAGATTGCTCATGGACAGCAAGCATTCTGTGTGTCAGCCTGGATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR CCA 72 bp | AGTCAATCAATTAGCCCAGAGAAGGCGAGTAGTCTGTaGATAGGGAAGGAGAGGCAGCGCACATGGTGCTAT | + |
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Preference number: 3 (lower is better) Translates to: SQSISPEKASSL*IGKERQRTWCY Trigger: ATAGCACCATGTGCGCTGCCTCTCCTTCCCTATCCACAGACTACTCGCCTTCTCTGGGCTAATTGATTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR CCA 72 bp | GTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTaGATTCTGGGTCTAGGTCACACACAAAGACCTCAG | + |
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Preference number: 3 (lower is better) Translates to: VLFQTSRKHNGV*ILGLGHTQRPQ Trigger: CTGAGGTCTTTGTGTGTGACCTAGACCCAGAATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR-3UTR CAA 90 bp | ATTCCAGTTTTTAACATCTTTTATCCTACAACACTCATACGATACACATGTGGCACAACCAAAAGAAGCTaGCTGGCTGGTGGTGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: IPVFNIFYPTTLIRYTCGTTKRS*LAGGEP Trigger: AGGCTCACCACCAGCCAGCAAGCTTCTTTTGGTTGT...GCCACATGTGTATCGTATGAGTGTTGTAGGATAAAAGATGTTAAAAACTGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | GTGGGTGACTGTCTAGCACCGGCCGGCCCCTGCCTACTTTGTTTCGTTCGGGGCGCTTTCTGCACTTCGTaGCACCACCCTCCAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VGDCLAPAGPCLLCFVRGAFCTS*HHPPAH Trigger: GTGGGCTGGAGGGTGGTGCCACGAAGTGCAGAAAGC...GCCCCGAACGAAACAAAGTAGGCAGGGGCCGGCCGGTGCTAGACAGTCACCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | CGGGGCTCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGACGGCCCCGGCTTGCTaGGTGCCACCTGAAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RGSSSNRRGSALLRVCIQTAPAC*VPPEGP Trigger: AGGGCCTTCAGGTGGCACCCAGCAAGCCGGGGCCGT...CTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGAGCCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | GTGGGTGACTGTCTAGCACCGGCCGGCCCCTGCCTACTTTGTTTCGTTCGGGGCCCGAAGGAGCCAAAATaGGCAGGCTGCTCCCATGAC | + |
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Preference number: 4 (lower is better) Translates to: VGDCLAPAGPCLLCFVRGPKEPK*AGCSHD Trigger: GTCATGGGAGCAGCCTGCTCATTTTGGCTCCTTCGG...GCCCCGAACGAAACAAAGTAGGCAGGGGCCGGCCGGTGCTAGACAGTCACCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | CGGGGCTCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGTTTCCTGGGGGCCACTaGCACGGGATTTCTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RGSSSNRRGSALLRVCIQFPGGH*HGISGL Trigger: GAGCCCAGAAATCCCGTGCCAGTGGCCCCCAGGAAA...CTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGAGCCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | GTGGGTGACTGTCTAGCACCGGCCGGCCCCTGCCTACTTTGTTTCGTTCGGGGCCTGGTCGAGACTCTCTaGTATGGCAAAGCTGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: VGDCLAPAGPCLLCFVRGLVETL*YGKAVE Trigger: CTCAACAGCTTTGCCATACCAGAGAGTCTCGACCAG...GCCCCGAACGAAACAAAGTAGGCAGGGGCCGGCCGGTGCTAGACAGTCACCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | GTGGGTGACTGTCTAGCACCGGCCGGCCCCTGCCTACTTTGTTTCGTTCGGGGCACAGCGATGAAGTCTTaGTGCATGGCTTCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VGDCLAPAGPCLLCFVRGTAMKS*CMASPL Trigger: AAGAGGAGAAGCCATGCATCAAGACTTCATCGCTGT...GCCCCGAACGAAACAAAGTAGGCAGGGGCCGGCCGGTGCTAGACAGTCACCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | GCAATCTCACAAGAAGCTTGGCCAAAGGTGGGTGACTGTCTAGCACCGGCCGGCTTCTGTGAGTGTCGCTaGCAGGAGGACATTCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: AISQEAWPKVGDCLAPAGFCECR*QEDILP Trigger: CGGCAGAATGTCCTCCTGTCAGCGACACTCACAGAA...GCCGGCCGGTGCTAGACAGTCACCCACCTTTGGCCAAGCTTCTTGTGAGATTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| 3UTR CAA 72 bp | CGGGGCTCCTCCTCCAACAGGCGAGGATCTGCCCTCTaGAGAGTCTGTATTCAGGGAGCGGTGCCAGTTATT | + |
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Preference number: 4 (lower is better) Translates to: RGSSSNRRGSAL*RVCIQGAVPVI Trigger: AATAACTGGCACCGCTCCCTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGAGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | CGATACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGCGTTCTCGGATTTCCTaGGGGCCACTGGCACGGGAT | + |
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Preference number: 4 (lower is better) Translates to: RYAPGVLFQTSRKHNGVWRSRIS*GPLARD Trigger: ATCCCGTGCCAGTGGCCCCCAGGAAATCCGAGAACG...CCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | GCAATCTCACAAGAAGCTTGGCCAAAGGTGGGTGACTGTCTAGCACCGGCCGGCGGGATACTCTGCTTCTaGACACTGGTCATACTGGAC | + |
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Preference number: 4 (lower is better) Translates to: AISQEAWPKVGDCLAPAGGILCF*TLVILD Trigger: GTCCAGTATGACCAGTGTTCAGAAGCAGAGTATCCC...GCCGGCCGGTGCTAGACAGTCACCCACCTTTGGCCAAGCTTCTTGTGAGATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | CGGGGCTCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGTTTGATGTCAGTGCTTaGAGAGACTGGACCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: RGSSSNRRGSALLRVCIQFDVSA*RDWTTG Trigger: CCCTGTGGTCCAGTCTCTTCAAGCACTGACATCAAA...CTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGAGCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | GCAATCTCACAAGAAGCTTGGCCAAAGGTGGGTGACTGTCTAGCACCGGCCGGCGTTCTTCCGATGCGGTaGATGTACTCTGCAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: AISQEAWPKVGDCLAPAGVLPMR*MYSAGE Trigger: TTCACCTGCAGAGTACATTCACCGCATCGGAAGAAC...GCCGGCCGGTGCTAGACAGTCACCCACCTTTGGCCAAGCTTCTTGTGAGATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | GCAATCTCACAAGAAGCTTGGCCAAAGGTGGGTGACTGTCTAGCACCGGCCGGCCTCCTGGAAAGCTTCTaGAGAGAACACTTGCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: AISQEAWPKVGDCLAPAGLLESF*REHLLS Trigger: CGAGAGCAAGTGTTCTCTCCAGAAGCTTTCCAGGAG...GCCGGCCGGTGCTAGACAGTCACCCACCTTTGGCCAAGCTTCTTGTGAGATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | CGATACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGTTACCTGAGCCCGTCTaGGACCGCACTAGGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: RYAPGVLFQTSRKHNGVWLPEPV*DRTRAS Trigger: AGATGCCCTAGTGCGGTCCCAGACGGGCTCAGGTAA...CCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | TACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTAGCAGGCTGCTCCCATaGCAGCCAATCCGGGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: YAPGVLFQTSRKHNGVWISRLLP*QPIRAV Trigger: AACTGCCCGGATTGGCTGTCATGGGAGCAGCCTGCT...AATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | CGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTCTTTGCTGGGTGCCACCTaGAGGCCCTGTTGTTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RSRGPLSNLSETQWCVDSLLGAT*RPCCLP Trigger: AGGCAAACAACAGGGCCTTCAGGTGGCACCCAGCAA...AGAATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR GCA 90 bp | CGGGGCTCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGCATGGCTTCTCCTCTTaGCTTCCATTGCCTATACTG | + |
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Preference number: 4 (lower is better) Translates to: RGSSSNRRGSALLRVCIQHGFSS*LPLPIL Trigger: CAGTATAGGCAATGGAAGGCAAGAGGAGAAGCCATG...CTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGAGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR GCA 90 bp | TCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGGGAGCGGAAGGCCCTGTTGTTTaGCTTGCTTTCTGCACTTCG | + |
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Preference number: 4 (lower is better) Translates to: SSSNRRGSALLRVCIQGAEGPVV*LAFCTS Trigger: CGAAGTGCAGAAAGCAAGGCAAACAACAGGGCCTTC...CGCTCCCTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR GCA 90 bp | CATGGCCAGGTTTTAACCCAAGGTAAAAGCCCTTGGGCCTTTCTAACAGAACATCCCCGGCTTGCTGGGTaGCACCTGAAGGCCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: HGQVLTQGKSPWAFLTEHPRLAG*HLKALL Trigger: CAACAGGGCCTTCAGGTGGCACCCAGCAAGCCGGGG...ATGTTCTGTTAGAAAGGCCCAAGGGCTTTTACCTTGGGTTAAAACCTGGCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | CGGGGCTCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGGAAATTAGATGTGGGTaGAGGTCCAGCTCCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: RGSSSNRRGSALLRVCIQEIRCG*RSSSWK Trigger: TTTCCAGGAGCTGGACCTCCACCCACATCTAATTTC...CTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGAGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | GCAATCTCACAAGAAGCTTGGCCAAAGGTGGGTGACTGTCTAGCACCGGCCGGCCTGTCTGCAATACTGTaGCTCGTTCTCGGATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: AISQEAWPKVGDCLAPAGLSAIL*LVLGFP Trigger: AGGAAATCCGAGAACGAGCCACAGTATTGCAGACAG...GCCGGCCGGTGCTAGACAGTCACCCACCTTTGGCCAAGCTTCTTGTGAGATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR GCA 90 bp | TCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGGGAGCGTCACTGGACACTTGGTaGTTTCTCTTGGTAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SSSNRRGSALLRVCIQGASLDTW*FLLVAS Trigger: AGAGGCTACCAAGAGAAAGCACCAAGTGTCCAGTGA...CGCTCCCTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR GCA 90 bp | ACAGGACATCAATCTAAAGCCTCGAGGCCATGTTGGATCCACCCTGACCCGGTCCTTGAGTGTTCTGAGTaGAGGACTTCAGCAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: TGHQSKASRPCWIHPDPVLECSE*RTSAGT Trigger: TGTGCCTGCTGAAGTCCTGCACTCAGAACACTCAAG...GACCGGGTCAGGGTGGATCCAACATGGCCTCGAGGCTTTAGATTGATGTCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | GCAATCTCACAAGAAGCTTGGCCAAAGGTGGGTGACTGTCTAGCACCGGCCGGCAGTGCTGTGGAGTTCTaGGATCTCAGGGTTGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: AISQEAWPKVGDCLAPAGSAVEF*DLRVVF Trigger: AAAAACAACCCTGAGATCCCAGAACTCCACAGCACT...GCCGGCCGGTGCTAGACAGTCACCCACCTTTGGCCAAGCTTCTTGTGAGATTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | GTGGGTGACTGTCTAGCACCGGCCGGCCCCTGCCTACTTTGTTTCGTTCGGGGCTCTGCTTCTGAACACTaGTCATACTGGACATTTTTA | + |
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Preference number: 4 (lower is better) Translates to: VGDCLAPAGPCLLCFVRGSASEH*SYWTFL Trigger: TAAAAATGTCCAGTATGACCAGTGTTCAGAAGCAGA...GCCCCGAACGAAACAAAGTAGGCAGGGGCCGGCCGGTGCTAGACAGTCACCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | TCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGGGAGCGGGCTTAAGTAGCTTCTaGACAGTGTCAAAGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: SSSNRRGSALLRVCIQGAGLSSF*TVSKLC Trigger: GCAAAGCTTTGACACTGTTCAGAAGCTACTTAAGCC...CGCTCCCTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | CGATACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGTGCACTTTTGCAGGATaGAGGCTGCAAGGCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: RYAPGVLFQTSRKHNGVWCTFAG*RLQGRQ Trigger: TTGTCTGCCTTGCAGCCTTCATCCTGCAAAAGTGCA...CCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR GCA 90 bp | TCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGGGAGCGTCAAACTTGCACTTTTaGAGGATGAAGGCTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSNRRGSALLRVCIQGASNLHF*RMKAAR Trigger: CCTTGCAGCCTTCATCCTGCAAAAGTGCAAGTTTGA...CGCTCCCTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | TACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTGCAGAGCCAACTCTCTaGTGGGCACTAGGACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YAPGVLFQTSRKHNGVWIAEPTL*WALGPK Trigger: CTTTGGTCCTAGTGCCCACCAGAGAGTTGGCTCTGC...AATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR TCA 90 bp | CGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTCTGACGGAGCACTGTACTaGACAATCCAGGTGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSRGPLSNLSETQWCVDSDGALY*TIQVTC Trigger: ACAAGTCACCTGGATTGTTCAGTACAGTGCTCCGTC...AGAATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR GCA 90 bp | GTGTGGATTCTGGGTCTAGGTCACACACAAAGACCTCAGATCCTGAAGAGCCAAGTTTGCCTTGCTTTCTaGACTTCGTGGCACCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: VWILGLGHTQRPQILKSQVCLAF*TSWHHP Trigger: AGGGTGGTGCCACGAAGTGCAGAAAGCAAGGCAAAC...TTGGCTCTTCAGGATCTGAGGTCTTTGTGTGTGACCTAGACCCAGAATCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CCA 90 bp | CGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTCTCTGGTGGAGCATCACTaGACACTTGGTGCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSRGPLSNLSETQWCVDSLVEHH*TLGAFS Trigger: AGAGAAAGCACCAAGTGTCCAGTGATGCTCCACCAG...AGAATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CCA 90 bp | GTGTGGATTCTGGGTCTAGGTCACACACAAAGACCTCAGATCCTGAAGAGCCAAGCCTTCCAGCAGCACTaGGATACTCTGCTTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VWILGLGHTQRPQILKSQAFQQH*DTLLLN Trigger: GTTCAGAAGCAGAGTATCCCAGTGCTGCTGGAAGGC...TTGGCTCTTCAGGATCTGAGGTCTTTGTGTGTGACCTAGACCCAGAATCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | TCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGGGAGCGGCAAAGCTGTTGAGCTaGATACTAGCAACTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSSNRRGSALLRVCIQGAAKLLS*ILATSL Trigger: TAAGGAAGTTGCTAGTATCCAGCTCAACAGCTTTGC...CGCTCCCTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR TCA 90 bp | CGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTCTACATTCTGCCGTTTCTaGCACTCAGCATTGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSRGPLSNLSETQWCVDSTFCRF*HSALTA Trigger: TGCTGTCAATGCTGAGTGTCAGAAACGGCAGAATGT...AGAATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR TCA 90 bp | GTGTGGATTCTGGGTCTAGGTCACACACAAAGACCTCAGATCCTGAAGAGCCAAGAGAAGCCAACGAGTTaGCATATTCTGCCTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VWILGLGHTQRPQILKSQEKPTS*HILPPK Trigger: CTTCGGAGGCAGAATATGTCAACTCGTTGGCTTCTC...TTGGCTCTTCAGGATCTGAGGTCTTTGTGTGTGACCTAGACCCAGAATCCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR GCA 90 bp | TACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTTTCACTCCTCCGTTTTaGTGGTGGAGCATCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YAPGVLFQTSRKHNGVWIFTPPF*WWSITG Trigger: TCCAGTGATGCTCCACCAGCAAAACGGAGGAGTGAA...AATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CCA 90 bp | TACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTACCAACACCACATGCTaGTCGAGACTCTCTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: YAPGVLFQTSRKHNGVWITNTTC*SRLSGM Trigger: CATACCAGAGAGTCTCGACCAGCATGTGGTGTTGGT...AATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR TCA 90 bp | CGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTCTTCTGACACTCAGCATTaGCAGCATTCAGAATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RSRGPLSNLSETQWCVDSSDTQH*QHSESL Trigger: CAGTGATTCTGAATGCTGTCAATGCTGAGTGTCAGA...AGAATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR TCA 90 bp | CGATACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGCCAACATTGATTTTGTaGGAAGCCAACGAGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RYAPGVLFQTSRKHNGVWPTLIL*EANELT Trigger: TGTCAACTCGTTGGCTTCTCACAAAATCAATGTTGG...CCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGGGAGCGAAAACAATCATCCTTTaGCAGGACAGCCAAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: SSSNRRGSALLRVCIQGAKTIIL*QDSQNI Trigger: GATATTTTGGCTGTCCTGGCAAAGGATGATTGTTTT...CGCTCCCTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CCA 90 bp | CATGGCCAGGTTTTAACCCAAGGTAAAAGCCCTTGGGCCTTTCTAACAGAACATTGGAGGTCCAGCTCCTaGAAAGCTTCTGGAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HGQVLTQGKSPWAFLTEHWRSSS*KASGEN Trigger: GTTCTCTCCAGAAGCTTTCCAGGAGCTGGACCTCCA...ATGTTCTGTTAGAAAGGCCCAAGGGCTTTTACCTTGGGTTAAAACCTGGCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGACATCAATCTAAAGCCTCGAGGCCATGTTGGATCCACCCTGACCCGGTCGACAGAGATACTGACTaGATTGTGCAAACTGATATC | + |
|
Preference number: 4 (lower is better) Translates to: TGHQSKASRPCWIHPDPVDRDTD*IVQTDI Trigger: GATATCAGTTTGCACAATCCAGTCAGTATCTCTGTC...GACCGGGTCAGGGTGGATCCAACATGGCCTCGAGGCTTTAGATTGATGTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR TCA 90 bp | CATGGCCAGGTTTTAACCCAAGGTAAAAGCCCTTGGGCCTTTCTAACAGAACATACTGAACAATCCAGGTaGCTTGTGGGAGATCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGQVLTQGKSPWAFLTEHTEQSR*LVGDPS Trigger: GCTTGGATCTCCCACAAGTCACCTGGATTGTTCAGT...ATGTTCTGTTAGAAAGGCCCAAGGGCTTTTACCTTGGGTTAAAACCTGGCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR GCA 90 bp | GTGTGGATTCTGGGTCTAGGTCACACACAAAGACCTCAGATCCTGAAGAGCCAACGAGTTGACATATTCTaGCTCCGAAGGAGCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VWILGLGHTQRPQILKSQRVDIF*LRRSQN Trigger: ATTTTGGCTCCTTCGGAGGCAGAATATGTCAACTCG...TTGGCTCTTCAGGATCTGAGGTCTTTGTGTGTGACCTAGACCCAGAATCCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | ACAGGACATCAATCTAAAGCCTCGAGGCCATGTTGGATCCACCCTGACCCGGTCGTCCAAATACTTCTTTaGAGGAAACGTTTTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGHQSKASRPCWIHPDPVVQILL*RKRFVC Trigger: ACACACAAAACGTTTCCTCCAAAGAAGTATTTGGAC...GACCGGGTCAGGGTGGATCCAACATGGCCTCGAGGCTTTAGATTGATGTCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR TCA 90 bp | CGATACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGCGTATTCGGTTAAAGTaGAGGTTCTTTGTGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RYAPGVLFQTSRKHNGVWRIRLK*RFFVDF Trigger: AAAATCCACAAAGAACCTTCACTTTAACCGAATACG...CCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR GCA 90 bp | TACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTCCTCTTGCCTTCCATTaGCTATACTGTCCAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: YAPGVLFQTSRKHNGVWIPLAFH*LYCPNT Trigger: AGTATTTGGACAGTATAGGCAATGGAAGGCAAGAGG...AATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR GCA 90 bp | CGATACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATACTGACTGGATTGTaGAAACTGATATCAACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RYAPGVLFQTSRKHNGVWILTGL*KLISTS Trigger: GCTAGTTGATATCAGTTTGCACAATCCAGTCAGTAT...CCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | ACAGGACATCAATCTAAAGCCTCGAGGCCATGTTGGATCCACCCTGACCCGGTCGAACACTGGTCATACTaGACATTTTTAAGACTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TGHQSKASRPCWIHPDPVEHWSY*TFLRLY Trigger: ATACAGTCTTAAAAATGTCCAGTATGACCAGTGTTC...GACCGGGTCAGGGTGGATCCAACATGGCCTCGAGGCTTTAGATTGATGTCCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | CGATACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGAAGACAATCATCTTCTaGTTCTTCTCAAACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RYAPGVLFQTSRKHNGVWKTIIF*FFSNLH Trigger: GTGCAAGTTTGAGAAGAACCAGAAGATGATTGTCTT...CCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | CGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTCTTATCACTGGCTTTCTTaGCCAAAACAGAGGATATTT | + |
|
Preference number: 4 (lower is better) Translates to: RSRGPLSNLSETQWCVDSYHWLS*PKQRIF Trigger: AAATATCCTCTGTTTTGGCCAAGAAAGCCAGTGATA...AGAATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | CATGGCCAGGTTTTAACCCAAGGTAAAAGCCCTTGGGCCTTTCTAACAGAACATTTTGTGGATTTTATATaGTCCACTAGACGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGQVLTQGKSPWAFLTEHFVDFI*STRRPG Trigger: TCCTGGCCGTCTAGTGGATCATATAAAATCCACAAA...ATGTTCTGTTAGAAAGGCCCAAGGGCTTTTACCTTGGGTTAAAACCTGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR GCA 90 bp | CATGGCCAGGTTTTAACCCAAGGTAAAAGCCCTTGGGCCTTTCTAACAGAACATCATACGGTCCATCACTaGGCTGTATTTTTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HGQVLTQGKSPWAFLTEHHTVHH*AVFLMS Trigger: TGACATCAAAAATACAGCGCAGTGATGGACCGTATG...ATGTTCTGTTAGAAAGGCCCAAGGGCTTTTACCTTGGGTTAAAACCTGGCCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | CATGGCCAGGTTTTAACCCAAGGTAAAAGCCCTTGGGCCTTTCTAACAGAACATGTTTTTAAACAGCGATaGAGTCTTGATGCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HGQVLTQGKSPWAFLTEHVFKQR*SLDAWL Trigger: AAGCCATGCATCAAGACTTCATCGCTGTTTAAAAAC...ATGTTCTGTTAGAAAGGCCCAAGGGCTTTTACCTTGGGTTAAAACCTGGCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR TCA 90 bp | CATGGCCAGGTTTTAACCCAAGGTAAAAGCCCTTGGGCCTTTCTAACAGAACATCCTTTAAATGTTCTCTaGGTTTCTTTATCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGQVLTQGKSPWAFLTEHPLNVL*VSLSLA Trigger: AGCCAGTGATAAAGAAACTCAGAGAACATTTAAAGG...ATGTTCTGTTAGAAAGGCCCAAGGGCTTTTACCTTGGGTTAAAACCTGGCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CCA 90 bp | ATTCCAGTTTTTAACATCTTTTATCCTACAACACTCATACGATACACATGTGGCGAGCCAACTCTCTGGTaGGCACTAGGACCAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IPVFNIFYPTTLIRYTCGEPTLW*ALGPKH Trigger: ATGCTTTGGTCCTAGTGCCCACCAGAGAGTTGGCTC...GCCACATGTGTATCGTATGAGTGTTGTAGGATAAAAGATGTTAAAAACTGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CAA 90 bp | GTGGGTGACTGTCTAGCACCGGCCGGCCCCTGCCTACTTTGTTTCGTTCGGGGCACTTGGTGCTTTCTCTaGGTAGCCTCTGCTTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VGDCLAPAGPCLLCFVRGTWCFL*VASACR Trigger: GCGGCAAGCAGAGGCTACCAAGAGAAAGCACCAAGT...GCCCCGAACGAAACAAAGTAGGCAGGGGCCGGCCGGTGCTAGACAGTCACCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS GCA 90 bp | GCTTGCTGGGTGCCACCTGAAGGCCCTGTTGTTTGCCTTGCTTTCTaGACTTCGTGGCACCACCCTCCAGCCCACTTGAGTGTTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ACWVPPEGPVVCLAF*TSWHHPPAHLSVLS Trigger: ACTCAGAACACTCAAGTGGGCTGGAGGGTGGTGCCACGAAGTGCAGAAAGCAAGGCAAACAACAGGGCCTTCAGGTGGCACCCAGCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CAA 90 bp | GTGGGTGACTGTCTAGCACCGGCCGGCCCCTGCCTACTTTGTTTCGTTCGGGGCGAGGCCTTTTTAAGCTaGCCTTCTTCACAGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VGDCLAPAGPCLLCFVRGEAFLS*PSSQQR Trigger: TCTCTGCTGTGAAGAAGGCAAGCTTAAAAAGGCCTC...GCCCCGAACGAAACAAAGTAGGCAGGGGCCGGCCGGTGCTAGACAGTCACCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CAA 90 bp | CGGGGCTCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGTTCTGGAGAGAACACTaGCTCTCGAGCCTGCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGSSSNRRGSALLRVCIQFWREH*LSSLLH Trigger: GTGAAGCAGGCTCGAGAGCAAGTGTTCTCTCCAGAA...CTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGAGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CAA 90 bp | CGGGGCTCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGCACCTGAAGGCCCTGTaGTTTGCCTTGCTTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RGSSSNRRGSALLRVCIQHLKAL*FALLSA Trigger: TGCAGAAAGCAAGGCAAACAACAGGGCCTTCAGGTG...CTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGAGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS TCA 90 bp | TCAGCAGGCACAAGGTGCTGCTTCCTCTGCGTCTTCCTCCGAGGGTaGGGCCTTTTTAAGCTTGCCTTCTTCACAGCAGAGACACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGTRCCFLCVFLRG*GLFKLAFFTAETLR Trigger: CCTCAGTGTCTCTGCTGTGAAGAAGGCAAGCTTAAAAAGGCCTCACCCTCGGAGGAAGACGCAGAGGAAGCAGCACCTTGTGCCTGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS-3UTR CAA 90 bp | CGGGGCTCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGGCATGGCTTCTCCTCTaGCCTTCCATTGCCTATACT | + |
|
Preference number: 5 (lower is better) Translates to: RGSSSNRRGSALLRVCIQAWLLL*PSIAYT Trigger: AGTATAGGCAATGGAAGGCAAGAGGAGAAGCCATGC...CTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGAGCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS CCA 90 bp | TCTTCAAACACTGTCTGCAATACTGTGGCTCGTTCTCGGATTTCCTaGGGGCCACTGGCACGGGATTTCTGGGCTCCCCTTTGTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSNTVCNTVARSRIS*GPLARDFWAPLCLL Trigger: AAGGAGACAAAGGGGAGCCCAGAAATCCCGTGCCAGTGGCCCCCAGGAAATCCGAGAACGAGCCACAGTATTGCAGACAGTGTTTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 90 bp | GCTGCAAGGCAGACAAGACGTAGCTTGCTGGGAACCAACACCACATaGTGGTCGAGACTCTCTGGTATGGCAAAGCTGTTGAGCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: AARQTRRSLLGTNTT*WSRLSGMAKLLSWI Trigger: TATCCAGCTCAACAGCTTTGCCATACCAGAGAGTCTCGACCAGCATGTGGTGTTGGTTCCCAGCAAGCTACGTCTTGTCTGCCTTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CAA 90 bp | CGATACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGAACAATCCAGGTGACTaGTGGGAGATCCAAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RYAPGVLFQTSRKHNGVWNNPGD*WEIQAS Trigger: CGAGGCTTGGATCTCCCACAAGTCACCTGGATTGTT...CCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 90 bp | TCCAGCTCCTGGAAAGCTTCTGGAGAGAACACTTGCTCTCGAGCCTaGTTCACTACAGTGCTGTGGAGTTCTGGGATCTCAGGGTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSSWKASGENTCSRA*FTTVLWSSGISGLF Trigger: AAACAACCCTGAGATCCCAGAACTCCACAGCACTGTAGTGAAGCAGGCTCGAGAGCAAGTGTTCTCTCCAGAAGCTTTCCAGGAGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 90 bp | GGGAGAACTCATGAAACACGGATGTTCTTTCCTCCTGTTCCATGTTaGCATGCAGCCGAAGGAATTTCAGTGGCCAGGAGGCAGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRTHETRMFFPPVPC*HAAEGISVARRQMA Trigger: TGCCATCTGCCTCCTGGCCACTGAAATTCCTTCGGCTGCATGGCAACATGGAACAGGAGGAAAGAACATCCGTGTTTCATGAGTTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 90 bp | CTGAGGTTTCTAGGAGCATCTCTTAGTCCAAAACTCTTAGCCACGTaGCCAAGGTGTAGGGCTCGGACATGGAAGATGGACTTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRFLGASLSPKLLAT*PRCRARTWKMDFSS Trigger: GGAGCTGAAGTCCATCTTCCATGTCCGAGCCCTACACCTTGGGCACGTGGCTAAGAGTTTTGGACTAAGAGATGCTCCTAGAAACCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CCA 90 bp | GCAAGGCAGACAAGACGTAGCTTGCTGGGAACCAACACCACATGCTaGTCGAGACTCTCTGGTATGGCAAAGCTGTTGAGCTGGATACTA | + |
|
Preference number: 5 (lower is better) Translates to: ARQTRRSLLGTNTTC*SRLSGMAKLLSWIL Trigger: TAGTATCCAGCTCAACAGCTTTGCCATACCAGAGAGTCTCGACCAGCATGTGGTGTTGGTTCCCAGCAAGCTACGTCTTGTCTGCCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGACATCAATCTAAAGCCTCGAGGCCATGTTGGATCCACCCTGACCCGGTCAACAGCGATGAAGTCTaGATGCATGGCTTCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TGHQSKASRPCWIHPDPVNSDEV*MHGFSS Trigger: AGAGGAGAAGCCATGCATCAAGACTTCATCGCTGTT...GACCGGGTCAGGGTGGATCCAACATGGCCTCGAGGCTTTAGATTGATGTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CAA 90 bp | CGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTCTTCCTCCTGTTCCATGTaGCCATGCAGCCGAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RSRGPLSNLSETQWCVDSSSCSM*PCSRRN Trigger: ATTCCTTCGGCTGCATGGCAACATGGAACAGGAGGA...AGAATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CAA 90 bp | TACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGATTGCCCTGTTGTTTGCCTaGCTTTCTGCACTTCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: YAPGVLFQTSRKHNGVWIALLFA*LSALRG Trigger: GCCACGAAGTGCAGAAAGCAAGGCAAACAACAGGGC...AATCCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 90 bp | CCAACTCTCTGGTGGGCACTAGGACCAAAGCATACGGTCCATCACTaGGCTGTATTTTTGATGTCAGTGCTTGAAGAGACTGGACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PTLWWALGPKHTVHH*AVFLMSVLEETGPQ Trigger: CTGTGGTCCAGTCTCTTCAAGCACTGACATCAAAAATACAGCGCAGTGATGGACCGTATGCTTTGGTCCTAGTGCCCACCAGAGAGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CCA 90 bp | TCTGACTGGAGTGCACATAATCTTCAAACACTGTCTGCAATACTGTaGCTCGTTCTCGGATTTCCTGGGGGCCACTGGCACGGGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDWSAHNLQTLSAIL*LVLGFPGGHWHGIS Trigger: AGAAATCCCGTGCCAGTGGCCCCCAGGAAATCCGAGAACGAGCCACAGTATTGCAGACAGTGTTTGAAGATTATGTGCACTCCAGTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CAA 90 bp | CGGGGCTCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGGAGATACTGACTGGATaGTGCAAACTGATATCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RGSSSNRRGSALLRVCIQEILTG*CKLIST Trigger: AGTTGATATCAGTTTGCACAATCCAGTCAGTATCTC...CTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGAGCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS TCA 90 bp | ACATCCGTGCAGAGCAAGACTCCCGTTTCAGAATGGGAGAACTCATaGAACACGGATGTTCTTTCCTCCTGTTCCATGTTGCCATGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSVQSKTPVSEWENS*NTDVLSSCSMLPCS Trigger: GCTGCATGGCAACATGGAACAGGAGGAAAGAACATCCGTGTTTCATGAGTTCTCCCATTCTGAAACGGGAGTCTTGCTCTGCACGGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 90 bp | CTCACCAACATTGATTTTGTGAGAAGCCAACGAGTTGACATATTCTaGCTCCGAAGGAGCCAAAATGAGCAGGCTGCTCCCATGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTNIDFVRSQRVDIF*LRRSQNEQAAPMTA Trigger: GGCTGTCATGGGAGCAGCCTGCTCATTTTGGCTCCTTCGGAGGCAGAATATGTCAACTCGTTGGCTTCTCACAAAATCAATGTTGGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CAA 90 bp | CGATACGCTCCAGGGGTCCTCTTTCAAACCTCTCGGAAACACAATGGTGTGTGGCACTGCGCTGTATTTTaGATGTCAGTGCTTGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RYAPGVLFQTSRKHNGVWHCAVF*MSVLEE Trigger: CTCTTCAAGCACTGACATCAAAAATACAGCGCAGTG...CCACACACCATTGTGTTTCCGAGAGGTTTGAAAGAGGACCCCTGGAGCGTATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CAA 90 bp | CGGGGCTCCTCCTCCAACAGGCGAGGATCTGCCCTCTTGAGAGTCTGTATTCAGCCACCAATTCACAACTaGAGAAAAAGACAATCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RGSSSNRRGSALLRVCIQPPIHN*RKRQSS Trigger: AGATGATTGTCTTTTTCTCAAGTTGTGAATTGGTGG...CTGAATACAGACTCTCAAGAGGGCAGATCCTCGCCTGTTGGAGGAGGAGCCCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS TCA 90 bp | ACACCTTCTGTGAGTGTCGCTGACAGGAGGACATTCTGCCGTTTCTaGCACTCAGCATTGACAGCATTCAGAATCACTGTGATGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPSVSVADRRTFCRF*HSALTAFRITVMSF Trigger: GAAGGACATCACAGTGATTCTGAATGCTGTCAATGCTGAGTGTCAGAAACGGCAGAATGTCCTCCTGTCAGCGACACTCACAGAAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CCA 90 bp | ACCACATGCTGGTCGAGACTCTCTGGTATGGCAAAGCTGTTGAGCTaGATACTAGCAACTTCCTTAGGATTGGGCTGGTTGCAGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TTCWSRLSGMAKLLS*ILATSLGLGWLQFL Trigger: CAAAAACTGCAACCAGCCCAATCCTAAGGAAGTTGCTAGTATCCAGCTCAACAGCTTTGCCATACCAGAGAGTCTCGACCAGCATGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGACATCAATCTAAAGCCTCGAGGCCATGTTGGATCCACCCTGACCCGGTCTGTCCAAATACTTCTTaGGAGGAAACGTTTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TGHQSKASRPCWIHPDPVCPNTS*EETFCV Trigger: CACACAAAACGTTTCCTCCAAAGAAGTATTTGGACA...GACCGGGTCAGGGTGGATCCAACATGGCCTCGAGGCTTTAGATTGATGTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CAA 90 bp | GTGTGGATTCTGGGTCTAGGTCACACACAAAGACCTCAGATCCTGAAGAGCCAAAACAGTGTCAAAGCTTaGCAGAGCCAACTCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VWILGLGHTQRPQILKSQNSVKA*QSQLSG Trigger: ACCAGAGAGTTGGCTCTGCAAAGCTTTGACACTGTT...TTGGCTCTTCAGGATCTGAGGTCTTTGTGTGTGACCTAGACCCAGAATCCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CAA 90 bp | GTGTGGATTCTGGGTCTAGGTCACACACAAAGACCTCAGATCCTGAAGAGCCAACTCAAACTTGCACTTTaGCAGGATGAAGGCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VWILGLGHTQRPQILKSQLKLAL*QDEGCK Trigger: CTTGCAGCCTTCATCCTGCAAAAGTGCAAGTTTGAG...TTGGCTCTTCAGGATCTGAGGTCTTTGTGTGTGACCTAGACCCAGAATCCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CCA 90 bp | GCAAAGCTGTTGAGCTGGATACTAGCAACTTCCTTAGGATTGGGCTaGTTGCAGTTTTTGTCCAGGACAGAGATACTGACTGGATTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AKLLSWILATSLGLG*LQFLSRTEILTGLC Trigger: GCACAATCCAGTCAGTATCTCTGTCCTGGACAAAAACTGCAACCAGCCCAATCCTAAGGAAGTTGCTAGTATCCAGCTCAACAGCTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS TCA 90 bp | AGTGCTGTGGAGTTCTGGGATCTCAGGGTTGTTTTTAAACAGCGATaGAGTCTTGATGCATGGCTTCTCCTCTTGCCTTCCATTGCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SAVEFWDLRVVFKQR*SLDAWLLLLPSIAY Trigger: ATAGGCAATGGAAGGCAAGAGGAGAAGCCATGCATCAAGACTTCATCGCTGTTTAAAAACAACCCTGAGATCCCAGAACTCCACAGCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS TCA 90 bp | AGACAATCATCTTCTGGTTCTTCTCAAACTTGCACTTTTGCAGGATaGAGGCTGCAAGGCAGACAAGACGTAGCTTGCTGGGAACCAACA | + |
|
Preference number: 5 (lower is better) Translates to: RQSSSGSSQTCTFAG*RLQGRQDVACWEPT Trigger: TGTTGGTTCCCAGCAAGCTACGTCTTGTCTGCCTTGCAGCCTTCATCCTGCAAAAGTGCAAGTTTGAGAAGAACCAGAAGATGATTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CCA 90 bp | ACTGTATTTATTGTAGAAATTAGATGTGGGTGGAGGTCCAGCTCCTaGAAAGCTTCTGGAGAGAACACTTGCTCTCGAGCCTGCTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: TVFIVEIRCGWRSSS*KASGENTCSRACFT Trigger: AGTGAAGCAGGCTCGAGAGCAAGTGTTCTCTCCAGAAGCTTTCCAGGAGCTGGACCTCCACCCACATCTAATTTCTACAATAAATACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CAA 90 bp | CATGGCCAGGTTTTAACCCAAGGTAAAAGCCCTTGGGCCTTTCTAACAGAACATTGGTTCTTCTCAAACTaGCACTTTTGCAGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HGQVLTQGKSPWAFLTEHWFFSN*HFCRMK Trigger: CTTCATCCTGCAAAAGTGCAAGTTTGAGAAGAACCA...ATGTTCTGTTAGAAAGGCCCAAGGGCTTTTACCTTGGGTTAAAACCTGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 90 bp | AATCACTGTGATGTCCTTCTCAAAACCCAAATCCAAGATCCTGTCTaGTTCATCCACAATCAGCCACCGTATTCGGTTAAAGTGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: NHCDVLLKTQIQDPV*FIHNQPPYSVKVKV Trigger: AACCTTCACTTTAACCGAATACGGTGGCTGATTGTGGATGAAGCAGACAGGATCTTGGATTTGGGTTTTGAGAAGGACATCACAGTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS-3UTR CAA 90 bp | ATTCCAGTTTTTAACATCTTTTATCCTACAACACTCATACGATACACATGTGGCTTTCACTCCTCCGTTTaGCTGGTGGAGCATCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: IPVFNIFYPTTLIRYTCGFHSSV*LVEHHW Trigger: CCAGTGATGCTCCACCAGCAAAACGGAGGAGTGAAA...GCCACATGTGTATCGTATGAGTGTTGTAGGATAAAAGATGTTAAAAACTGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CCA 90 bp | CTTCTCCTCTTGCCTTCCATTGCCTATACTGTCCAAATACTTCTTTaGAGGAAACGTTTTGTGTGTACTCCCTTTAAATGTTCTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLPSIAYTVQILL*RKRFVCTPFKCSLS Trigger: ACTCAGAGAACATTTAAAGGGAGTACACACAAAACGTTTCCTCCAAAGAAGTATTTGGACAGTATAGGCAATGGAAGGCAAGAGGAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | CCGGCTTGCTGGGTGCCACCTGAAGGCCCTGTTGTTTaGCTTGCTTTCTGCACTTCGTGGCACCACCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PACWVPPEGPVV*LAFCTSWHHPP Trigger: TGGAGGGTGGTGCCACGAAGTGCAGAAAGCAAGGCAAACAACAGGGCCTTCAGGTGGCACCCAGCAAGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS TCA 72 bp | CATTCTCTCCACGGCCCCGGCTTGCTGGGTGCCACCTaGAGGCCCTGTTGTTTGCCTTGCTTTCTGCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: HSLHGPGLLGAT*RPCCLPCFLHF Trigger: GAAGTGCAGAAAGCAAGGCAAACAACAGGGCCTTCAGGTGGCACCCAGCAAGCCGGGGCCGTGGAGAGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | GTGGCACCACCCTCCAGCCCACTTGAGTGTTCTGAGTaGAGGACTTCAGCAGGCACAAGGTGCTGCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VAPPSSPLECSE*RTSAGTRCCFL Trigger: GAGGAAGCAGCACCTTGTGCCTGCTGAAGTCCTGCACTCAGAACACTCAAGTGGGCTGGAGGGTGGTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | GTGCCACCTGAAGGCCCTGTTGTTTGCCTTGCTTTCTaGACTTCGTGGCACCACCCTCCAGCCCACTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VPPEGPVVCLAF*TSWHHPPAHLS Trigger: ACTCAAGTGGGCTGGAGGGTGGTGCCACGAAGTGCAGAAAGCAAGGCAAACAACAGGGCCTTCAGGTGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CCA 72 bp | ACTGTCTGCAATACTGTGGCTCGTTCTCGGATTTCCTaGGGGCCACTGGCACGGGATTTCTGGGCTCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TVCNTVARSRIS*GPLARDFWAPL Trigger: AAGGGGAGCCCAGAAATCCCGTGCCAGTGGCCCCCAGGAAATCCGAGAACGAGCCACAGTATTGCAGACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | TGCTCCCATGACAGCCAATCCGGGCAGTTCTTCCGATaGGGTGAATGTACTCTGCAGGTGAAGACGGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CSHDSQSGQFFR*GECTLQVKTEH Trigger: GTGCTCCGTCTTCACCTGCAGAGTACATTCACCGCATCGGAAGAACTGCCCGGATTGGCTGTCATGGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CCA 72 bp | GAAGGCCCTGTTGTTTGCCTTGCTTTCTGCACTTCGTaGCACCACCCTCCAGCCCACTTGAGTGTTCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: EGPVVCLAFCTS*HHPPAHLSVLS Trigger: ACTCAGAACACTCAAGTGGGCTGGAGGGTGGTGCCACGAAGTGCAGAAAGCAAGGCAAACAACAGGGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS TCA 72 bp | ACAAGGTGCTGCTTCCTCTGCGTCTTCCTCCGAGGGTaGGGCCTTTTTAAGCTTGCCTTCTTCACAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TRCCFLCVFLRG*GLFKLAFFTAE Trigger: CTCTGCTGTGAAGAAGGCAAGCTTAAAAAGGCCTCACCCTCGGAGGAAGACGCAGAGGAAGCAGCACCTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | AGGTCCAGCTCCTGGAAAGCTTCTGGAGAGAACACTTaGTCTCGAGCCTGCTTCACTACAGTGCTGTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSSSWKASGENT*SRACFTTVLWS Trigger: ACTCCACAGCACTGTAGTGAAGCAGGCTCGAGAGCAAGTGTTCTCTCCAGAAGCTTTCCAGGAGCTGGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS TCA 72 bp | GGCAGTTCTTCCGATGCGGTGAATGTACTCTGCAGGTaGAGACGGAGCACTGTACTGAACAATCCAGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GSSSDAVNVLCR*RRSTVLNNPGD Trigger: GTCACCTGGATTGTTCAGTACAGTGCTCCGTCTTCACCTGCAGAGTACATTCACCGCATCGGAAGAACTGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | CAGACAAGACGTAGCTTGCTGGGAACCAACACCACATaGTGGTCGAGACTCTCTGGTATGGCAAAGCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QTRRSLLGTNTT*WSRLSGMAKLL Trigger: CAACAGCTTTGCCATACCAGAGAGTCTCGACCAGCATGTGGTGTTGGTTCCCAGCAAGCTACGTCTTGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | AATCCAGGTGACTTGTGGGAGATCCAAGCCTCGAGATaGAACATCCGTGCAGAGCAAGACTCCCGTTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: NPGDLWEIQASR*NIRAEQDSRFR Trigger: TCTGAAACGGGAGTCTTGCTCTGCACGGATGTTGCATCTCGAGGCTTGGATCTCCCACAAGTCACCTGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CCA 72 bp | GAACAGTGTCAAAGCTTTGCAGAGCCAACTCTCTGGTaGGCACTAGGACCAAAGCATACGGTCCATCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: EQCQSFAEPTLW*ALGPKHTVHHC Trigger: GCAGTGATGGACCGTATGCTTTGGTCCTAGTGCCCACCAGAGAGTTGGCTCTGCAAAGCTTTGACACTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CCA 72 bp | GCTGGGAACCAACACCACATGCTGGTCGAGACTCTCTaGTATGGCAAAGCTGTTGAGCTGGATACTAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: AGNQHHMLVETL*YGKAVELDTSN Trigger: GTTGCTAGTATCCAGCTCAACAGCTTTGCCATACCAGAGAGTCTCGACCAGCATGTGGTGTTGGTTCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CCA 72 bp | ACAAGACGTAGCTTGCTGGGAACCAACACCACATGCTaGTCGAGACTCTCTGGTATGGCAAAGCTGTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TRRSLLGTNTTC*SRLSGMAKLLS Trigger: GCTCAACAGCTTTGCCATACCAGAGAGTCTCGACCAGCATGTGGTGTTGGTTCCCAGCAAGCTACGTCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CAA 90 bp | ACCAACACCACATGCTGGTCGAGACTCTCTGGTATGGCAAAGCTGTaGAGCTGGATACTAGCAACTTCCTTAGGATTGGGCTGGTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TNTTCWSRLSGMAKL*SWILATSLGLGWLQ Trigger: CTGCAACCAGCCCAATCCTAAGGAAGTTGCTAGTATCCAGCTCAACAGCTTTGCCATACCAGAGAGTCTCGACCAGCATGTGGTGTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS TCA 72 bp | CAGGTGAAGACGGAGCACTGTACTGAACAATCCAGGTaGCTTGTGGGAGATCCAAGCCTCGAGATGCAACAT | + |
|
Preference number: 6 (lower is better) Translates to: QVKTEHCTEQSR*LVGDPSLEMQH Trigger: ATGTTGCATCTCGAGGCTTGGATCTCCCACAAGTCACCTGGATTGTTCAGTACAGTGCTCCGTCTTCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | TGGAAAGCTTCTGGAGAGAACACTTGCTCTCGAGCCTaGTTCACTACAGTGCTGTGGAGTTCTGGGATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: WKASGENTCSRA*FTTVLWSSGIS Trigger: TGAGATCCCAGAACTCCACAGCACTGTAGTGAAGCAGGCTCGAGAGCAAGTGTTCTCTCCAGAAGCTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | AACACGGATGTTCTTTCCTCCTGTTCCATGTTGCCATaGAGCCGAAGGAATTTCAGTGGCCAGGAGGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: NTDVLSSCSMLP*SRRNFSGQEAD Trigger: ATCTGCCTCCTGGCCACTGAAATTCCTTCGGCTGCATGGCAACATGGAACAGGAGGAAAGAACATCCGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | CATGAAACACGGATGTTCTTTCCTCCTGTTCCATGTTaGCATGCAGCCGAAGGAATTTCAGTGGCCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HETRMFFPPVPC*HAAEGISVARR Trigger: CCTCCTGGCCACTGAAATTCCTTCGGCTGCATGGCAACATGGAACAGGAGGAAAGAACATCCGTGTTTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS TCA 72 bp | GTGAGTGTCGCTGACAGGAGGACATTCTGCCGTTTCTaGCACTCAGCATTGACAGCATTCAGAATCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VSVADRRTFCRF*HSALTAFRITV Trigger: CACAGTGATTCTGAATGCTGTCAATGCTGAGTGTCAGAAACGGCAGAATGTCCTCCTGTCAGCGACACTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CAA 72 bp | ACATGCTGGTCGAGACTCTCTGGTATGGCAAAGCTGTaGAGCTGGATACTAGCAACTTCCTTAGGATTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TCWSRLSGMAKL*SWILATSLGLG Trigger: GCCCAATCCTAAGGAAGTTGCTAGTATCCAGCTCAACAGCTTTGCCATACCAGAGAGTCTCGACCAGCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CAA 90 bp | CGAGCCTGCTTCACTACAGTGCTGTGGAGTTCTGGGATCTCAGGGTaGTTTTTAAACAGCGATGAAGTCTTGATGCATGGCTTCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RACFTTVLWSSGISG*FLNSDEVLMHGFSS Trigger: AGAGGAGAAGCCATGCATCAAGACTTCATCGCTGTTTAAAAACAACCCTGAGATCCCAGAACTCCACAGCACTGTAGTGAAGCAGGCTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS TCA 72 bp | TCTTCTGGTTCTTCTCAAACTTGCACTTTTGCAGGATaGAGGCTGCAAGGCAGACAAGACGTAGCTTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGSSQTCTFAG*RLQGRQDVACW Trigger: CCAGCAAGCTACGTCTTGTCTGCCTTGCAGCCTTCATCCTGCAAAAGTGCAAGTTTGAGAAGAACCAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | CTTGGCCAAAACAGAGGATATTTCACTCCTCCGTTTTaGTGGTGGAGCATCACTGGACACTTGGTGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGQNRGYFTPPF*WWSITGHLVLS Trigger: AGAAAGCACCAAGTGTCCAGTGATGCTCCACCAGCAAAACGGAGGAGTGAAATATCCTCTGTTTTGGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | TGGTGGGCACTAGGACCAAAGCATACGGTCCATCACTaGGCTGTATTTTTGATGTCAGTGCTTGAAGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: WWALGPKHTVHH*AVFLMSVLEET Trigger: AGTCTCTTCAAGCACTGACATCAAAAATACAGCGCAGTGATGGACCGTATGCTTTGGTCCTAGTGCCCACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS GCA 72 bp | ATTGATTTTGTGAGAAGCCAACGAGTTGACATATTCTaGCTCCGAAGGAGCCAAAATGAGCAGGCTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: IDFVRSQRVDIF*LRRSQNEQAAP Trigger: GGGAGCAGCCTGCTCATTTTGGCTCCTTCGGAGGCAGAATATGTCAACTCGTTGGCTTCTCACAAAATCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
||
| CDS CAA 90 bp | TGGAGTTCTGGGATCTCAGGGTTGTTTTTAAACAGCGATGAAGTCTaGATGCATGGCTTCTCCTCTTGCCTTCCATTGCCTATACTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WSSGISGLFLNSDEV*MHGFSSCLPLPILS Trigger: GGACAGTATAGGCAATGGAAGGCAAGAGGAGAAGCCATGCATCAAGACTTCATCGCTGTTTAAAAACAACCCTGAGATCCCAGAACTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS TCA 72 bp | CAGAGCAAGACTCCCGTTTCAGAATGGGAGAACTCATaGAACACGGATGTTCTTTCCTCCTGTTCCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: QSKTPVSEWENS*NTDVLSSCSML Trigger: CAACATGGAACAGGAGGAAAGAACATCCGTGTTTCATGAGTTCTCCCATTCTGAAACGGGAGTCTTGCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS GCA 72 bp | ACAATCATCTTCTGGTTCTTCTCAAACTTGCACTTTTaGAGGATGAAGGCTGCAAGGCAGACAAGACGTAGC | + |
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Preference number: 6 (lower is better) Translates to: TIIFWFFSNLHF*RMKAARQTRRS Trigger: GCTACGTCTTGTCTGCCTTGCAGCCTTCATCCTGCAAAAGTGCAAGTTTGAGAAGAACCAGAAGATGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS CCA 72 bp | TTGAGCTGGATACTAGCAACTTCCTTAGGATTGGGCTaGTTGCAGTTTTTGTCCAGGACAGAGATACTGACT | + |
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Preference number: 6 (lower is better) Translates to: LSWILATSLGLG*LQFLSRTEILT Trigger: AGTCAGTATCTCTGTCCTGGACAAAAACTGCAACCAGCCCAATCCTAAGGAAGTTGCTAGTATCCAGCTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS CAA 72 bp | AAGCTGTTGAGCTGGATACTAGCAACTTCCTTAGGATaGGGCTGGTTGCAGTTTTTGTCCAGGACAGAGATA | + |
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Preference number: 6 (lower is better) Translates to: KLLSWILATSLG*GWLQFLSRTEI Trigger: TATCTCTGTCCTGGACAAAAACTGCAACCAGCCCAATCCTAAGGAAGTTGCTAGTATCCAGCTCAACAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS GCA 72 bp | GATGTCCTTCTCAAAACCCAAATCCAAGATCCTGTCTaGTTCATCCACAATCAGCCACCGTATTCGGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: DVLLKTQIQDPV*FIHNQPPYSVK Trigger: TTTAACCGAATACGGTGGCTGATTGTGGATGAAGCAGACAGGATCTTGGATTTGGGTTTTGAGAAGGACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS CAA 90 bp | AACAGCGATGAAGTCTTGATGCATGGCTTCTCCTCTTGCCTTCCATaGCCTATACTGTCCAAATACTTCTTTGGAGGAAACGTTTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: NSDEVLMHGFSSCLP*PILSKYFFGGNVLC Trigger: ACACAAAACGTTTCCTCCAAAGAAGTATTTGGACAGTATAGGCAATGGAAGGCAAGAGGAGAAGCCATGCATCAAGACTTCATCGCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS CAA 72 bp | TTGCAGTTTTTGTCCAGGACAGAGATACTGACTGGATaGTGCAAACTGATATCAACTAGCCGTGTTACACCT | + |
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Preference number: 6 (lower is better) Translates to: LQFLSRTEILTG*CKLISTSRVTP Trigger: AGGTGTAACACGGCTAGTTGATATCAGTTTGCACAATCCAGTCAGTATCTCTGTCCTGGACAAAAACTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS TCA 72 bp | ATATCTTCCATCTTAATCTCACCAACATTGATTTTGTaGGAAGCCAACGAGTTGACATATTCTGCCTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: ISSILISPTLIL*EANELTYSASE Trigger: TTCGGAGGCAGAATATGTCAACTCGTTGGCTTCTCACAAAATCAATGTTGGTGAGATTAAGATGGAAGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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| CDS CCA 72 bp | TTGCCTTCCATTGCCTATACTGTCCAAATACTTCTTTaGAGGAAACGTTTTGTGTGTACTCCCTTTAAATGT | + |
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Preference number: 6 (lower is better) Translates to: LPSIAYTVQILL*RKRFVCTPFKC Trigger: ACATTTAAAGGGAGTACACACAAAACGTTTCCTCCAAAGAAGTATTTGGACAGTATAGGCAATGGAAGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113853.3 |
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