Pregenerated sensors for DDX28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045538Ensembl transcript IDs: ENSMUST00000058579.7
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR TCA 90 bp | TCCACTTTATTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCCTCAATGTCGCCCACTaGCAAGTGTTCAACTTCCTG | + |
Preference number: 2 (lower is better) Translates to: STLFSERYFPILSSSLLFLNVAH*QVFNFL Trigger: CAGGAAGTTGAACACTTGTCAGTGGGCGACATTGAG...GAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAATAAAGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR TCA 90 bp | TCCACTTTATTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCCCCAACGGCCCAGCGTaGGGCGTGCGGGCTGGTTCA | + |
Preference number: 4 (lower is better) Translates to: STLFSERYFPILSSSLLFPNGPA*GVRAGS Trigger: TGAACCAGCCCGCACGCCTCACGCTGGGCCGTTGGG...GAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAATAAAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CCA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAAGTGAGGCGTGCGGGCTaGTTCAACTCCGGCCGCCGC | + |
Preference number: 4 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQVRRAG*FNSGRR Trigger: GCGGCGGCCGGAGTTGAACCAGCCCGCACGCCTCAC...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CCA 90 bp | TCCACTTTATTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCGCCACGGGAAGCCAGTaGCGCTCGCTCCCAACGGCC | + |
Preference number: 4 (lower is better) Translates to: STLFSERYFPILSSSLLFATGSQ*RSLPTA Trigger: GGCCGTTGGGAGCGAGCGCCACTGGCTTCCCGTGGC...GAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAATAAAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR TCA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAATCGGGGACAGCCTCCTaGAGCGCCAGCAGCACTCGG | + |
Preference number: 4 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQSGTAS*SASSTR Trigger: CCGAGTGCTGCTGGCGCTTCAGGAGGCTGTCCCCGA...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR GCA 90 bp | TTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAGCCCAGCGTGAGGCGTaGGGGCTGGTTCAACTCCGG | + |
Preference number: 4 (lower is better) Translates to: FSERYFPILSSSLLFKSPAQREA*GLVQLR Trigger: CCGGAGTTGAACCAGCCCGCACGCCTCACGCTGGGC...TGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR GCA 90 bp | TTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCACCAGGTCCACGAAGCTaGCCCGGGACGAGAGGTTCC | + |
Preference number: 4 (lower is better) Translates to: FSERYFPILSSSLLFKSPPGPRS*PGTRGS Trigger: GGAACCTCTCGTCCCGGGGCAGCTTCGTGGACCTGG...TGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR TCA 90 bp | TTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCACAAGTACCCACCCAGTaGCTGGGCCACTGCCTGCAC | + |
Preference number: 4 (lower is better) Translates to: FSERYFPILSSSLLFKSPQVPTQ*LGHCLH Trigger: GTGCAGGCAGTGGCCCAGTCACTGGGTGGGTACTTG...TGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CCA 90 bp | TTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCATACCCACCCAGTGACTaGGCCACTGCCTGCACCTGT | + |
Preference number: 4 (lower is better) Translates to: FSERYFPILSSSLLFKSPYPPSD*ATACTC Trigger: ACAGGTGCAGGCAGTGGCCCAGTCACTGGGTGGGTA...TGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR TCA 90 bp | TCCACTTTATTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCGATACCTGCCCTCATTaGGGCCGGCATTTGCCCTTG | + |
Preference number: 4 (lower is better) Translates to: STLFSERYFPILSSSLLFDTCPH*GRHLPL Trigger: CAAGGGCAAATGCCGGCCTCAATGAGGGCAGGTATC...GAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAATAAAGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR GCA 90 bp | TTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAGACTGGGCCACTGCCTaGACCTGTTCGGCTAGTTCT | + |
Preference number: 4 (lower is better) Translates to: FSERYFPILSSSLLFKSPDWATA*TCSASS Trigger: AGAACTAGCCGAACAGGTGCAGGCAGTGGCCCAGTC...TGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR GCA 90 bp | TTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCACCAAGTTCTATCACCTaGAGGCCCAAGTACCCACCC | + |
Preference number: 4 (lower is better) Translates to: FSERYFPILSSSLLFKSPPSSIT*RPKYPP Trigger: GGGTGGGTACTTGGGCCTGCAGGTGATAGAACTTGG...TGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CCA 90 bp | TCCACTTTATTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCGGCCTTCTGGAAACGTaGCTCCCACCAGCACTAACT | + |
Preference number: 4 (lower is better) Translates to: STLFSERYFPILSSSLLFGLLET*LPPALT Trigger: AGTTAGTGCTGGTGGGAGCCACGTTTCCAGAAGGCC...GAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAATAAAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR TCA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAAGGTTTTCGACTGCACTaGGGTTGGCTGCACAACTTC | + |
Preference number: 4 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQGFRLH*GWLHNF Trigger: GAAGTTGTGCAGCCAACCTCAGTGCAGTCGAAAACC...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR GCA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAAACGACCCACCCTTCCTaGTCTGTGGATGTAATCCTG | + |
Preference number: 4 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQTTHPS*SVDVIL Trigger: CAGGATTACATCCACAGAGCAGGAAGGGTGGGTCGT...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CCA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAACCCACCAGCACTAACTaGGCTTTGGGATTAAAGGGG | + |
Preference number: 4 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQPTSTN*ALGLKG Trigger: CCCCTTTAATCCCAAAGCCCAGTTAGTGCTGGTGGG...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR TCA 90 bp | TCCACTTTATTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCGCCAGTTCAATTTTCTaGACCAGGCTCACATCCCAG | + |
Preference number: 4 (lower is better) Translates to: STLFSERYFPILSSSLLFASSIF*TRLTSQ Trigger: CTGGGATGTGAGCCTGGTTCAGAAAATTGAACTGGC...GAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAATAAAGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CCA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAACTCACATCCCAGGGGTaGGTCACAAAACTGATAACG | + |
Preference number: 4 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQLTSQG*VTKLIT Trigger: CGTTATCAGTTTTGTGACCCACCCCTGGGATGTGAG...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR TCA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAAGACTGTCTGGACTGGTaGCTTTACTCAGTAACTGGT | + |
Preference number: 4 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQDCLDW*LYSVTG Trigger: ACCAGTTACTGAGTAAAGTCACCAGTCCAGACAGTC...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR TCA 90 bp | TTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCACTTTGTCCTGCTGTTTaGGGATCTGAACCAGTTCTG | + |
Preference number: 4 (lower is better) Translates to: FSERYFPILSSSLLFKSPLCPAV*GSEPVL Trigger: CAGAACTGGTTCAGATCCTCAAACAGCAGGACAAAG...TGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR GCA 90 bp | TTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCACTCGGCTGGACTTTCTaGTATAGGGCTCTTTTCCAA | + |
Preference number: 4 (lower is better) Translates to: FSERYFPILSSSLLFKSPLGWTF*YRALFQ Trigger: TTGGAAAAGAGCCCTATAGCAGAAAGTCCAGCCGAG...TGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR GCA 90 bp | TTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCATCTCCTTCGGCGAGCTaGCAGTTCAATTTTCTGAAC | + |
Preference number: 4 (lower is better) Translates to: FSERYFPILSSSLLFKSPSPSAS*QFNFLN Trigger: GTTCAGAAAATTGAACTGGCAGCTCGCCGAAGGAGA...TGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CCA 90 bp | TTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCACCCTTCTGGAAACTCTaGAAGATACCTGCCCTCATT | + |
Preference number: 4 (lower is better) Translates to: FSERYFPILSSSLLFKSPPFWKL*KIPALI Trigger: AATGAGGGCAGGTATCTTCCAGAGTTTCCAGAAGGG...TGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CCA 90 bp | TCCACTTTATTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCTTCTGGGAGCCCTTCTaGAAACTCTGGAAGATACCT | + |
Preference number: 4 (lower is better) Translates to: STLFSERYFPILSSSLLFFWEPF*KLWKIP Trigger: AGGTATCTTCCAGAGTTTCCAGAAGGGCTCCCAGAA...GAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAATAAAGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CCA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAACAGACAAGTATGTTCTaGGAGCCCTTCTGGAAACTC | + |
Preference number: 4 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQQTSMF*EPFWKL Trigger: GAGTTTCCAGAAGGGCTCCCAGAACATACTTGTCTG...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR TCA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAATGCAGCCTTAGATGTTaGATCTTGTGGTCATCCAGA | + |
Preference number: 4 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQCSLRC*ILWSSR Trigger: TCTGGATGACCACAAGATTCAACATCTAAGGCTGCA...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR GCA 90 bp | TCCACTTTATTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCTTCTGTCACCTTGTCTaGTCCCTTCAGTCTCATAAA | + |
Preference number: 4 (lower is better) Translates to: STLFSERYFPILSSSLLFFCHLV*SLQSHK Trigger: TTTATGAGACTGAAGGGAGCAGACAAGGTGACAGAA...GAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAATAAAGTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CCA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAAACTTTACTCAGTAACTaGTTTAGGCCTTCTGGAAAC | + |
Preference number: 4 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQTLLSN*FRPSGN Trigger: GTTTCCAGAAGGCCTAAACCAGTTACTGAGTAAAGT...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 90 bp | GCCAGTGGCGCTCGCTCCCAACGGCCCAGCGTGAGGCGTGCGGGCTaGTTCAACTCCGGCCGCCGCGCCGAGACCAGCAGGGGACCGGGG | + |
Preference number: 5 (lower is better) Translates to: ASGARSQRPSVRRAG*FNSGRRAETSRGPG Trigger: CCCCGGTCCCCTGCTGGTCTCGGCGCGGCGGCCGGAGTTGAACCAGCCCGCACGCCTCACGCTGGGCCGTTGGGAGCGAGCGCCACTGGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 90 bp | ACGGGAAGCCAGTGGCGCTCGCTCCCAACGGCCCAGCGTGAGGCGTaGGGGCTGGTTCAACTCCGGCCGCCGCGCCGAGACCAGCAGGGG | + |
Preference number: 5 (lower is better) Translates to: TGSQWRSLPTAQREA*GLVQLRPPRRDQQG Trigger: CCCCTGCTGGTCTCGGCGCGGCGGCCGGAGTTGAACCAGCCCGCACGCCTCACGCTGGGCCGTTGGGAGCGAGCGCCACTGGCTTCCCGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 90 bp | TCCAGCCACGGGAAGCCAGTGGCGCTCGCTCCCAACGGCCCAGCGTaGGGCGTGCGGGCTGGTTCAACTCCGGCCGCCGCGCCGAGACCA | + |
Preference number: 5 (lower is better) Translates to: SSHGKPVALAPNGPA*GVRAGSTPAAAPRP Trigger: TGGTCTCGGCGCGGCGGCCGGAGTTGAACCAGCCCGCACGCCTCACGCTGGGCCGTTGGGAGCGAGCGCCACTGGCTTCCCGTGGCTGGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 90 bp | CGCGCCGAGACCAGCAGGGGACCGGGGCGCACTAGCACTGGCCGCTaGAAACTCCCACGGCCGCTCTGTCGCTGTTCCTGCCGTCGCTGC | + |
Preference number: 5 (lower is better) Translates to: RAETSRGPGRTSTGR*KLPRPLCRCSCRRC Trigger: GCAGCGACGGCAGGAACAGCGACAGAGCGGCCGTGGGAGTTTGCAGCGGCCAGTGCTAGTGCGCCCCGGTCCCCTGCTGGTCTCGGCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 90 bp | AGCACTGGCCGCTGCAAACTCCCACGGCCGCTCTGTCGCTGTTCCTaGCGTCGCTGCAGAGCCCGCGGAACGCGCACCACTGGCAAGGAC | + |
Preference number: 5 (lower is better) Translates to: STGRCKLPRPLCRCS*RRCRARGTRTTGKD Trigger: GTCCTTGCCAGTGGTGCGCGTTCCGCGGGCTCTGCAGCGACGGCAGGAACAGCGACAGAGCGGCCGTGGGAGTTTGCAGCGGCCAGTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 90 bp | ATGGTCTTGCCGCGATCGCCGATGCTTCCAGCCACGGGAAGCCAGTaGCGCTCGCTCCCAACGGCCCAGCGTGAGGCGTGCGGGCTGGTT | + |
Preference number: 5 (lower is better) Translates to: MVLPRSPMLPATGSQ*RSLPTAQREACGLV Trigger: AACCAGCCCGCACGCCTCACGCTGGGCCGTTGGGAGCGAGCGCCACTGGCTTCCCGTGGCTGGAAGCATCGGCGATCGCGGCAAGACCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 90 bp | CGCTGCAAACTCCCACGGCCGCTCTGTCGCTGTTCCTGCCGTCGCTaGAGAGCCCGCGGAACGCGCACCACTGGCAAGGACTGGTCGGAA | + |
Preference number: 5 (lower is better) Translates to: RCKLPRPLCRCSCRR*RARGTRTTGKDWSE Trigger: TTCCGACCAGTCCTTGCCAGTGGTGCGCGTTCCGCGGGCTCTGCAGCGACGGCAGGAACAGCGACAGAGCGGCCGTGGGAGTTTGCAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 90 bp | TGCTGCACTCGCTCTATGGAGAAATGGTCTTGCCGCGATCGCCGATaGTTCCAGCCACGGGAAGCCAGTGGCGCTCGCTCCCAACGGCCC | + |
Preference number: 5 (lower is better) Translates to: CCTRSMEKWSCRDRR*FQPREASGARSQRP Trigger: GGGCCGTTGGGAGCGAGCGCCACTGGCTTCCCGTGGCTGGAAGCATCGGCGATCGCGGCAAGACCATTTCTCCATAGAGCGAGTGCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 90 bp | TTCGACTGCACTGAGGTTGGCTGCACAACTTCGGGGACAGCCTCCTaGAGCGCCAGCAGCACTCGGGGTTCCAGACCCAGGTCCACGAAG | + |
Preference number: 5 (lower is better) Translates to: FDCTEVGCTTSGTAS*SASSTRGSRPRSTK Trigger: CTTCGTGGACCTGGGTCTGGAACCCCGAGTGCTGCTGGCGCTTCAGGAGGCTGTCCCCGAAGTTGTGCAGCCAACCTCAGTGCAGTCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 90 bp | CGGCTAGTTCTCGGGAAGGTACCAGAACCAAGCCTCGAGGAGCCGTaGAACTGCGGGAGTCCAGGTCTGACCCTCTCAGGAGCCGCTGAA | + |
Preference number: 5 (lower is better) Translates to: RLVLGKVPEPSLEEP*NCGSPGLTLSGAAE Trigger: TTCAGCGGCTCCTGAGAGGGTCAGACCTGGACTCCCGCAGTTTCACGGCTCCTCGAGGCTTGGTTCTGGTACCTTCCCGAGAACTAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 90 bp | ATCACCTGCAGGCCCAAGTACCCACCCAGTGACTGGGCCACTGCCTaGACCTGTTCGGCTAGTTCTCGGGAAGGTACCAGAACCAAGCCT | + |
Preference number: 5 (lower is better) Translates to: ITCRPKYPPSDWATA*TCSASSREGTRTKP Trigger: AGGCTTGGTTCTGGTACCTTCCCGAGAACTAGCCGAACAGGTGCAGGCAGTGGCCCAGTCACTGGGTGGGTACTTGGGCCTGCAGGTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 90 bp | CGGGAGGCGATGTCTGTGCAGACAAGTATGTTCTGGGAGCCCTTCTaGAAACTCTGGAAGATACCTGCCCTCATTGAGGCCGGCATTTGC | + |
Preference number: 5 (lower is better) Translates to: REAMSVQTSMFWEPF*KLWKIPALIEAGIC Trigger: GCAAATGCCGGCCTCAATGAGGGCAGGTATCTTCCAGAGTTTCCAGAAGGGCTCCCAGAACATACTTGTCTGCACAGACATCGCCTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 90 bp | GGTCATCCAGAATGTACCCAAGCCAGTTCACGGTGCTGGCGCTGTTaGAGAATACCAGGACAGTTCCCGAGGGTTCCGTCTTACTTGCTT | + |
Preference number: 5 (lower is better) Translates to: GHPECTQASSRCWRC*RIPGQFPRVPSYLL Trigger: AAGCAAGTAAGACGGAACCCTCGGGAACTGTCCTGGTATTCTGCAACAGCGCCAGCACCGTGAACTGGCTTGGGTACATTCTGGATGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 90 bp | GTTGAATCTTGTGGTCATCCAGAATGTACCCAAGCCAGTTCACGGTaGTGGCGCTGTTGCAGAATACCAGGACAGTTCCCGAGGGTTCCG | + |
Preference number: 5 (lower is better) Translates to: VESCGHPECTQASSR*WRCCRIPGQFPRVP Trigger: CGGAACCCTCGGGAACTGTCCTGGTATTCTGCAACAGCGCCAGCACCGTGAACTGGCTTGGGTACATTCTGGATGACCACAAGATTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 90 bp | GAATCTTGTGGTCATCCAGAATGTACCCAAGCCAGTTCACGGTGCTaGCGCTGTTGCAGAATACCAGGACAGTTCCCGAGGGTTCCGTCT | + |
Preference number: 5 (lower is better) Translates to: ESCGHPECTQASSRC*RCCRIPGQFPRVPS Trigger: AGACGGAACCCTCGGGAACTGTCCTGGTATTCTGCAACAGCGCCAGCACCGTGAACTGGCTTGGGTACATTCTGGATGACCACAAGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 90 bp | CTGTCTAGGCCTCGGGAGGCGATGTCTGTGCAGACAAGTATGTTCTaGGAGCCCTTCTGGAAACTCTGGAAGATACCTGCCCTCATTGAG | + |
Preference number: 5 (lower is better) Translates to: LSRPREAMSVQTSMF*EPFWKLWKIPALIE Trigger: CTCAATGAGGGCAGGTATCTTCCAGAGTTTCCAGAAGGGCTCCCAGAACATACTTGTCTGCACAGACATCGCCTCCCGAGGCCTAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 90 bp | GGACAGTTCCCGAGGGTTCCGTCTTACTTGCTTTGTCCTGCTGTTTaGGGATCTGAACCAGTTCTGTCACCTTGTCTGCTCCCTTCAGTC | + |
Preference number: 5 (lower is better) Translates to: GQFPRVPSYLLCPAV*GSEPVLSPCLLPSV Trigger: GACTGAAGGGAGCAGACAAGGTGACAGAACTGGTTCAGATCCTCAAACAGCAGGACAAAGCAAGTAAGACGGAACCCTCGGGAACTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 90 bp | AACTGGTTTAGGCCTTCTGGAAACGTGGCTCCCACCAGCACTAACTaGGCTTTGGGATTAAAGGGGTCTTCTAACTCGGCTGGACTTTCT | + |
Preference number: 5 (lower is better) Translates to: NWFRPSGNVAPTSTN*ALGLKGSSNSAGLS Trigger: AGAAAGTCCAGCCGAGTTAGAAGACCCCTTTAATCCCAAAGCCCAGTTAGTGCTGGTGGGAGCCACGTTTCCAGAAGGCCTAAACCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 90 bp | GTCACCTTGTCTGCTCCCTTCAGTCTCATAAATGTCTGTCTGACATaGGGCATGAGACAGTGCAGCTTGGAGCTGGTAATGGTGGTCAGA | + |
Preference number: 5 (lower is better) Translates to: VTLSAPFSLINVCLT*GMRQCSLELVMVVR Trigger: TCTGACCACCATTACCAGCTCCAAGCTGCACTGTCTCATGCCTCATGTCAGACAGACATTTATGAGACTGAAGGGAGCAGACAAGGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 90 bp | CCCGAGGGTTCCGTCTTACTTGCTTTGTCCTGCTGTTTGAGGATCTaGACCAGTTCTGTCACCTTGTCTGCTCCCTTCAGTCTCATAAAT | + |
Preference number: 5 (lower is better) Translates to: PEGSVLLALSCCLRI*TSSVTLSAPFSLIN Trigger: ATTTATGAGACTGAAGGGAGCAGACAAGGTGACAGAACTGGTTCAGATCCTCAAACAGCAGGACAAAGCAAGTAAGACGGAACCCTCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 90 bp | ACTTCATCTAGCACTATGAAGTTAAGATGCTGTAAGCTGATCAGTTaGCTTTTCAGAGCCTTCCACAGCGCCCCTGGAGTAGCCACTAAC | + |
Preference number: 5 (lower is better) Translates to: TSSSTMKLRCCKLIS*LFRAFHSAPGVATN Trigger: GTTAGTGGCTACTCCAGGGGCGCTGTGGAAGGCTCTGAAAAGTCAACTGATCAGCTTACAGCATCTTAACTTCATAGTGCTAGATGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 90 bp | TTTGTCCTGCTGTTTGAGGATCTGAACCAGTTCTGTCACCTTGTCTaGTCCCTTCAGTCTCATAAATGTCTGTCTGACATGAGGCATGAG | + |
Preference number: 5 (lower is better) Translates to: FVLLFEDLNQFCHLV*SLQSHKCLSDMRHE Trigger: CTCATGCCTCATGTCAGACAGACATTTATGAGACTGAAGGGAGCAGACAAGGTGACAGAACTGGTTCAGATCCTCAAACAGCAGGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CAA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAATCGACTGCACTGAGGTaGGCTGCACAACTTCGGGGA | + |
Preference number: 5 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQSTALR*AAQLRG Trigger: TCCCCGAAGTTGTGCAGCCAACCTCAGTGCAGTCGA...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CAA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAAAGATACCTGCCCTCATaGAGGCCGGCATTTGCCCTT | + |
Preference number: 5 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQRYLPS*RPAFAL Trigger: AAGGGCAAATGCCGGCCTCAATGAGGGCAGGTATCT...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CAA 90 bp | TTTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAACCAGTTCTGTCACCTaGTCTGCTCCCTTCAGTCTC | + |
Preference number: 5 (lower is better) Translates to: FSERYFPILSSSLLFKSPTSSVT*SAPFSL Trigger: GAGACTGAAGGGAGCAGACAAGGTGACAGAACTGGT...TGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS-3UTR CAA 90 bp | TTTCTGAACGTTACTTTCCAATCCTGTCCAGTAGTTTACTTTTCAAATCTCCAAAGCACTAACTGGGCTTaGGGATTAAAGGGGTCTTCT | + |
Preference number: 5 (lower is better) Translates to: FLNVTFQSCPVVYFSNLQSTNWA*GLKGSS Trigger: AGAAGACCCCTTTAATCCCAAAGCCCAGTTAGTGCT...TTGGAGATTTGAAAAGTAAACTACTGGACAGGATTGGAAAGTAACGTTCAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 72 bp | GGGAAGCCAGTGGCGCTCGCTCCCAACGGCCCAGCGTaGGGCGTGCGGGCTGGTTCAACTCCGGCCGCCGCG | + |
Preference number: 6 (lower is better) Translates to: GKPVALAPNGPA*GVRAGSTPAAA Trigger: CGCGGCGGCCGGAGTTGAACCAGCCCGCACGCCTCACGCTGGGCCGTTGGGAGCGAGCGCCACTGGCTTCCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 72 bp | CAGTGGCGCTCGCTCCCAACGGCCCAGCGTGAGGCGTaGGGGCTGGTTCAACTCCGGCCGCCGCGCCGAGAC | + |
Preference number: 6 (lower is better) Translates to: QWRSLPTAQREA*GLVQLRPPRRD Trigger: GTCTCGGCGCGGCGGCCGGAGTTGAACCAGCCCGCACGCCTCACGCTGGGCCGTTGGGAGCGAGCGCCACTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 72 bp | GCTCGCTCCCAACGGCCCAGCGTGAGGCGTGCGGGCTaGTTCAACTCCGGCCGCCGCGCCGAGACCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: ARSQRPSVRRAG*FNSGRRAETSR Trigger: CCTGCTGGTCTCGGCGCGGCGGCCGGAGTTGAACCAGCCCGCACGCCTCACGCTGGGCCGTTGGGAGCGAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 72 bp | CCGCGATCGCCGATGCTTCCAGCCACGGGAAGCCAGTaGCGCTCGCTCCCAACGGCCCAGCGTGAGGCGTGC | + |
Preference number: 6 (lower is better) Translates to: PRSPMLPATGSQ*RSLPTAQREAC Trigger: GCACGCCTCACGCTGGGCCGTTGGGAGCGAGCGCCACTGGCTTCCCGTGGCTGGAAGCATCGGCGATCGCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 72 bp | CTCCCACGGCCGCTCTGTCGCTGTTCCTGCCGTCGCTaGAGAGCCCGCGGAACGCGCACCACTGGCAAGGAC | + |
Preference number: 6 (lower is better) Translates to: LPRPLCRCSCRR*RARGTRTTGKD Trigger: GTCCTTGCCAGTGGTGCGCGTTCCGCGGGCTCTGCAGCGACGGCAGGAACAGCGACAGAGCGGCCGTGGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 72 bp | GCAGCACTCGGGGTTCCAGACCCAGGTCCACGAAGCTaGCCCGGGACGAGAGGTTCCTCAGGGCGGGCGCCT | + |
Preference number: 6 (lower is better) Translates to: AALGVPDPGPRS*PGTRGSSGRAP Trigger: AGGCGCCCGCCCTGAGGAACCTCTCGTCCCGGGGCAGCTTCGTGGACCTGGGTCTGGAACCCCGAGTGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 72 bp | CGCTGCAAACTCCCACGGCCGCTCTGTCGCTGTTCCTaGCGTCGCTGCAGAGCCCGCGGAACGCGCACCACT | + |
Preference number: 6 (lower is better) Translates to: RCKLPRPLCRCS*RRCRARGTRTT Trigger: AGTGGTGCGCGTTCCGCGGGCTCTGCAGCGACGGCAGGAACAGCGACAGAGCGGCCGTGGGAGTTTGCAGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 72 bp | ACCAGCAGGGGACCGGGGCGCACTAGCACTGGCCGCTaGAAACTCCCACGGCCGCTCTGTCGCTGTTCCTGC | + |
Preference number: 6 (lower is better) Translates to: TSRGPGRTSTGR*KLPRPLCRCSC Trigger: GCAGGAACAGCGACAGAGCGGCCGTGGGAGTTTGCAGCGGCCAGTGCTAGTGCGCCCCGGTCCCCTGCTGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 72 bp | CTCGGGAAGGTACCAGAACCAAGCCTCGAGGAGCCGTaGAACTGCGGGAGTCCAGGTCTGACCCTCTCAGGA | + |
Preference number: 6 (lower is better) Translates to: LGKVPEPSLEEP*NCGSPGLTLSG Trigger: TCCTGAGAGGGTCAGACCTGGACTCCCGCAGTTTCACGGCTCCTCGAGGCTTGGTTCTGGTACCTTCCCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 72 bp | AGGCCCAAGTACCCACCCAGTGACTGGGCCACTGCCTaGACCTGTTCGGCTAGTTCTCGGGAAGGTACCAGA | + |
Preference number: 6 (lower is better) Translates to: RPKYPPSDWATA*TCSASSREGTR Trigger: TCTGGTACCTTCCCGAGAACTAGCCGAACAGGTGCAGGCAGTGGCCCAGTCACTGGGTGGGTACTTGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 72 bp | ATCCCAGGGGTGGGTCACAAAACTGATAACGGACCCTaGCACTTCGCTGCCCACACGACCCACCCTTCCTGC | + |
Preference number: 6 (lower is better) Translates to: IPGVGHKTDNGP*HFAAHTTHPSC Trigger: GCAGGAAGGGTGGGTCGTGTGGGCAGCGAAGTGCCAGGGTCCGTTATCAGTTTTGTGACCCACCCCTGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 72 bp | GAATGTACCCAAGCCAGTTCACGGTGCTGGCGCTGTTaGAGAATACCAGGACAGTTCCCGAGGGTTCCGTCT | + |
Preference number: 6 (lower is better) Translates to: ECTQASSRCWRC*RIPGQFPRVPS Trigger: AGACGGAACCCTCGGGAACTGTCCTGGTATTCTGCAACAGCGCCAGCACCGTGAACTGGCTTGGGTACATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 72 bp | CGTGGACACTGTCTAGGCCTCGGGAGGCGATGTCTGTaGAGACAAGTATGTTCTGGGAGCCCTTCTGGAAAC | + |
Preference number: 6 (lower is better) Translates to: RGHCLGLGRRCL*RQVCSGSPSGN Trigger: GTTTCCAGAAGGGCTCCCAGAACATACTTGTCTGCACAGACATCGCCTCCCGAGGCCTAGACAGTGTCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 72 bp | GGTCATCCAGAATGTACCCAAGCCAGTTCACGGTGCTaGCGCTGTTGCAGAATACCAGGACAGTTCCCGAGG | + |
Preference number: 6 (lower is better) Translates to: GHPECTQASSRC*RCCRIPGQFPR Trigger: CCTCGGGAACTGTCCTGGTATTCTGCAACAGCGCCAGCACCGTGAACTGGCTTGGGTACATTCTGGATGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CAA 72 bp | AGAATGTACCCAAGCCAGTTCACGGTGCTGGCGCTGTaGCAGAATACCAGGACAGTTCCCGAGGGTTCCGTC | + |
Preference number: 6 (lower is better) Translates to: RMYPSQFTVLAL*QNTRTVPEGSV Trigger: GACGGAACCCTCGGGAACTGTCCTGGTATTCTGCAACAGCGCCAGCACCGTGAACTGGCTTGGGTACATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS GCA 72 bp | TGTGGTCATCCAGAATGTACCCAAGCCAGTTCACGGTaGTGGCGCTGTTGCAGAATACCAGGACAGTTCCCG | + |
Preference number: 6 (lower is better) Translates to: CGHPECTQASSR*WRCCRIPGQFP Trigger: CGGGAACTGTCCTGGTATTCTGCAACAGCGCCAGCACCGTGAACTGGCTTGGGTACATTCTGGATGACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 72 bp | CCTCGGGAGGCGATGTCTGTGCAGACAAGTATGTTCTaGGAGCCCTTCTGGAAACTCTGGAAGATACCTGCC | + |
Preference number: 6 (lower is better) Translates to: PREAMSVQTSMF*EPFWKLWKIPA Trigger: GGCAGGTATCTTCCAGAGTTTCCAGAAGGGCTCCCAGAACATACTTGTCTGCACAGACATCGCCTCCCGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CAA 90 bp | TGGTCATCCAGAATGTACCCAAGCCAGTTCACGGTGCTGGCGCTGTaGCAGAATACCAGGACAGTTCCCGAGGGTTCCGTCTTACTTGCT | + |
Preference number: 6 (lower is better) Translates to: WSSRMYPSQFTVLAL*QNTRTVPEGSVLLA Trigger: AGCAAGTAAGACGGAACCCTCGGGAACTGTCCTGGTATTCTGCAACAGCGCCAGCACCGTGAACTGGCTTGGGTACATTCTGGATGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 72 bp | AGGCTTCTCCTTCGGCGAGCTGCCAGTTCAATTTTCTaGACCAGGCTCACATCCCAGGGGTGGGTCACAAAA | + |
Preference number: 6 (lower is better) Translates to: RLLLRRAASSIF*TRLTSQGWVTK Trigger: TTTTGTGACCCACCCCTGGGATGTGAGCCTGGTTCAGAAAATTGAACTGGCAGCTCGCCGAAGGAGAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 72 bp | AGGCCTTCTGGAAACGTGGCTCCCACCAGCACTAACTaGGCTTTGGGATTAAAGGGGTCTTCTAACTCGGCT | + |
Preference number: 6 (lower is better) Translates to: RPSGNVAPTSTN*ALGLKGSSNSA Trigger: AGCCGAGTTAGAAGACCCCTTTAATCCCAAAGCCCAGTTAGTGCTGGTGGGAGCCACGTTTCCAGAAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 72 bp | GTCAGACTGTCTGGACTGGTGACTTTACTCAGTAACTaGTTTAGGCCTTCTGGAAACGTGGCTCCCACCAGC | + |
Preference number: 6 (lower is better) Translates to: VRLSGLVTLLSN*FRPSGNVAPTS Trigger: GCTGGTGGGAGCCACGTTTCCAGAAGGCCTAAACCAGTTACTGAGTAAAGTCACCAGTCCAGACAGTCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 72 bp | CAGACAAGTATGTTCTGGGAGCCCTTCTGGAAACTCTaGAAGATACCTGCCCTCATTGAGGCCGGCATTTGC | + |
Preference number: 6 (lower is better) Translates to: QTSMFWEPFWKL*KIPALIEAGIC Trigger: GCAAATGCCGGCCTCAATGAGGGCAGGTATCTTCCAGAGTTTCCAGAAGGGCTCCCAGAACATACTTGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CAA 72 bp | AGCCCTTCTGGAAACTCTGGAAGATACCTGCCCTCATaGAGGCCGGCATTTGCCCTTGCAGCCTTAGATGTT | + |
Preference number: 6 (lower is better) Translates to: SPSGNSGRYLPS*RPAFALAALDV Trigger: AACATCTAAGGCTGCAAGGGCAAATGCCGGCCTCAATGAGGGCAGGTATCTTCCAGAGTTTCCAGAAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CAA 90 bp | TGTTCTGGGAGCCCTTCTGGAAACTCTGGAAGATACCTGCCCTCATaGAGGCCGGCATTTGCCCTTGCAGCCTTAGATGTTGAATCTTGT | + |
Preference number: 6 (lower is better) Translates to: CSGSPSGNSGRYLPS*RPAFALAALDVESC Trigger: ACAAGATTCAACATCTAAGGCTGCAAGGGCAAATGCCGGCCTCAATGAGGGCAGGTATCTTCCAGAGTTTCCAGAAGGGCTCCCAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 72 bp | CCGAGGGTTCCGTCTTACTTGCTTTGTCCTGCTGTTTaGGGATCTGAACCAGTTCTGTCACCTTGTCTGCTC | + |
Preference number: 6 (lower is better) Translates to: PRVPSYLLCPAV*GSEPVLSPCLL Trigger: GAGCAGACAAGGTGACAGAACTGGTTCAGATCCTCAAACAGCAGGACAAAGCAAGTAAGACGGAACCCTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS CCA 72 bp | ATGTCTGTGCAGACAAGTATGTTCTGGGAGCCCTTCTaGAAACTCTGGAAGATACCTGCCCTCATTGAGGCC | + |
Preference number: 6 (lower is better) Translates to: MSVQTSMFWEPF*KLWKIPALIEA Trigger: GGCCTCAATGAGGGCAGGTATCTTCCAGAGTTTCCAGAAGGGCTCCCAGAACATACTTGTCTGCACAGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 72 bp | TCTGCTCCCTTCAGTCTCATAAATGTCTGTCTGACATaGGGCATGAGACAGTGCAGCTTGGAGCTGGTAATG | + |
Preference number: 6 (lower is better) Translates to: SAPFSLINVCLT*GMRQCSLELVM Trigger: CATTACCAGCTCCAAGCTGCACTGTCTCATGCCTCATGTCAGACAGACATTTATGAGACTGAAGGGAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 72 bp | TCCGTCTTACTTGCTTTGTCCTGCTGTTTGAGGATCTaGACCAGTTCTGTCACCTTGTCTGCTCCCTTCAGT | + |
Preference number: 6 (lower is better) Translates to: SVLLALSCCLRI*TSSVTLSAPFS Trigger: ACTGAAGGGAGCAGACAAGGTGACAGAACTGGTTCAGATCCTCAAACAGCAGGACAAAGCAAGTAAGACGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |
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CDS TCA 72 bp | AGCACTATGAAGTTAAGATGCTGTAAGCTGATCAGTTaGCTTTTCAGAGCCTTCCACAGCGCCCCTGGAGTA | + |
Preference number: 6 (lower is better) Translates to: STMKLRCCKLIS*LFRAFHSAPGV Trigger: TACTCCAGGGGCGCTGTGGAAGGCTCTGAAAAGTCAACTGATCAGCTTACAGCATCTTAACTTCATAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058579.7 |