Pregenerated sensors for DDX21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020075Ensembl transcript IDs: ENSMUST00000045866.9
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACTGGAACAGAAAACACCTAATGAGTGTGTGAAGACACTGGAGTaGATCTGCTGTCTGTTCTACGCTCAACACCCAGAGCCGGGCACA | + |
|
Preference number: 1 (lower is better) Translates to: SLEQKTPNECVKTLE*ICCLFYAQHPEPGT Trigger: TGTGCCCGGCTCTGGGTGTTGAGCGTAGAACAGACAGCAGATTCACTCCAGTGTCTTCACACACTCATTAGGTGTTTTCTGTTCCAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR TCA 90 bp | GCTCTTGAAAAGCTCTGCTCAGCATCAAACCTCAGCAGACACATATaGACACAGCAATTGTTTGCAAGAGTCCAGGATGCCAAGGAATGC | + |
|
Preference number: 1 (lower is better) Translates to: ALEKLCSASNLSRHI*TQQLFARVQDAKEC Trigger: GCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTGTTCATATGTGTCTGCTGAGGTTTGATGCTGAGCAGAGCTTTTCAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR TCA 90 bp | CTTGTCTGGAGACTTCACTGGAACAGAAAACACCTAATGAGTGTGTaGAGACACTGGAGTGAATCTGCTGTCTGTTCTACGCTCAACACC | + |
|
Preference number: 1 (lower is better) Translates to: LVWRLHWNRKHLMSV*RHWSESAVCSTLNT Trigger: GGTGTTGAGCGTAGAACAGACAGCAGATTCACTCCAGTGTCTTCACACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR GCA 90 bp | TGTATACTCTGCCTGTGTGAGGTTCTGAGCTTAGGCCCCAGTGAGTaGACACACACACACACACACACACACAAAGATAAAATTACAAGA | + |
|
Preference number: 1 (lower is better) Translates to: CILCLCEVLSLGPSE*THTHTHTHKDKITR Trigger: TCTTGTAATTTTATCTTTGTGTGTGTGTGTGTGTGTGTGTGTGCACTCACTGGGGCCTAAGCTCAGAACCTCACACAGGCAGAGTATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR GCA 90 bp | CTCAGCATCAAACCTCAGCAGACACATATGAACACAGCAATTGTTTaGAAGAGTCCAGGATGCCAAGGAATGCAAACAAACACATTCCGC | + |
|
Preference number: 1 (lower is better) Translates to: LSIKPQQTHMNTAIV*KSPGCQGMQTNTFR Trigger: GCGGAATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTGTTCATATGTGTCTGCTGAGGTTTGATGCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTTAACAGCCCCAGACTGCACACTAGCAGACACAGCCCCTCCAGGAGCCACCAGCAGGGTGGACCCTaGGGTCCACAGTGGGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: PFNSPRLHTSRHSPSRSHQQGGP*GPQWEQ Trigger: CTGTTCCCACTGTGGACCCCAGGGTCCACCCTGCTG...GTGGCTCCTGGAGGGGCTGTGTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGCCTGTCCCACTGTGCCCCTTTAACAGCCCCAGACTGCACACTAGCAGACCCCTGGGGTCCACAGTaGGAACAGTCCCTTCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: TSLSHCAPLTAPDCTLADPWGPQ*EQSLLA Trigger: GGCCAGAAGGGACTGTTCCCACTGTGGACCCCAGGG...GTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGGGCACAGTGGGACAGGCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR-3UTR TCA 90 bp | CCCTTTAACAGCCCCAGACTGCACACTAGCAGACACAGCCCCTCCAGGAGCCACGTGAAGACACTGGAGTaGATCTGCTGTCTGTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: PFNSPRLHTSRHSPSRSHVKTLE*ICCLFY Trigger: GTAGAACAGACAGCAGATTCACTCCAGTGTCTTCAC...GTGGCTCCTGGAGGGGCTGTGTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR-3UTR TCA 90 bp | CCCTTTAACAGCCCCAGACTGCACACTAGCAGACACAGCCCCTCCAGGAGCCACCACCTAATGAGTGTGTaGAGACACTGGAGTGAATCT | + |
|
Preference number: 2 (lower is better) Translates to: PFNSPRLHTSRHSPSRSHHLMSV*RHWSES Trigger: AGATTCACTCCAGTGTCTTCACACACTCATTAGGTG...GTGGCTCCTGGAGGGGCTGTGTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCACGCTTCTCCACCTCCTCACCTGTCACGATCAAAGACACCTTTGTGGCTCAGGATGCCAAGGAATaGAAACAAACACATTCCGCC | + |
|
Preference number: 2 (lower is better) Translates to: KARFSTSSPVTIKDTFVAQDAKE*KQTHSA Trigger: GGCGGAATGTGTTTGTTTGCATTCCTTGGCATCCTG...AGCCACAAAGGTGTCTTTGATCGTGACAGGTGAGGAGGTGGAGAAGCGTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTATATACCCTTGTCTGGAGACTTCACTGGAACAGAAAACACCTAATGAGTGTGCTTTGTCAGCAGGGTaGACCCTGGGGTCCACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SIYPCLETSLEQKTPNECALSAG*TLGSTV Trigger: CACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGC...ACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAGGGTATATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR-3UTR TCA 90 bp | AAAGCACGCTTCTCCACCTCCTCACCTGTCACGATCAAAGACACCTTTGTGGCTACTCACTTTGAAGGATaGGTAGGACACATGTATAGG | + |
|
Preference number: 2 (lower is better) Translates to: KARFSTSSPVTIKDTFVATHFEG*VGHMYR Trigger: CCTATACATGTGTCCTACTCATCCTTCAAAGTGAGT...AGCCACAAAGGTGTCTTTGATCGTGACAGGTGAGGAGGTGGAGAAGCGTGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR CAA 90 bp | TCCACCTCCTCACCTGTCACGATCAAAGACACCTTTGTGGCTTTTTaGAGATATTTGTCAGCAACACCAACTGAACCCCATGCTTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: STSSPVTIKDTFVAF*RYLSATPTEPHASW Trigger: CCAAGAAGCATGGGGTTCAGTTGGTGTTGCTGACAAATATCTCAAAAAAGCCACAAAGGTGTCTTTGATCGTGACAGGTGAGGAGGTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR-3UTR GCA 90 bp | CACAGCAATTGTTTGCAAGAGTCCAGGATGCCAAGGAATGCAAACAAACACATTGGCGTGTGTATACTCTaGCTGTGTGAGGTTCTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: HSNCLQESRMPRNANKHIGVCIL*LCEVLS Trigger: GCTCAGAACCTCACACAGGCAGAGTATACACACGCC...AATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTATATACCCTTGTCTGGAGACTTCACTGGAACAGAAAACACCTAATGAGTGTTTCCGCCCTGGCTCTTaGAATCCTCCAGAGACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SIYPCLETSLEQKTPNECFRPGS*NPPETE Trigger: CTCAGTCTCTGGAGGATTGCAAGAGCCAGGGCGGAA...ACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAGGGTATATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR CAA 90 bp | GCTCAGCATCAAACCTCAGCAGACACATATGAACACAGCAATTGTTaGCAAGAGTCCAGGATGCCAAGGAATGCAAACAAACACATTCCG | + |
|
Preference number: 2 (lower is better) Translates to: AQHQTSADTYEHSNC*QESRMPRNANKHIP Trigger: CGGAATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTGTTCATATGTGTCTGCTGAGGTTTGATGCTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR-3UTR TCA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTCATAGAAGGGCTCTCTaGGCTGTGATAATTTTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: HSSFCARRDDSQIKNTSSHRRAL*AVIIFQ Trigger: CTGAAAAATTATCACAGCTCAGAGAGCCCTTCTATG...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR-3UTR CCA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTAGGCAGATCCATGGTTaGTTTTACTTTGTAAATCTA | + |
|
Preference number: 2 (lower is better) Translates to: HSSFCARRDDSQIKNTSSRQIHG*FYFVNL Trigger: TAGATTTACAAAGTAAAACCAACCATGGATCTGCCT...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR CAA 90 bp | TATCCAGTCTCATTACTGACAAAAACACCTAGACATGTTAGGCATTaGGGCCTGAACTTTACACTGGGTCCTATAAAAATGTCTTTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: YPVSLLTKTPRHVRH*GLNFTLGPIKMSFY Trigger: ATAGAAAGACATTTTTATAGGACCCAGTGTAAAGTTCAGGCCCAAATGCCTAACATGTCTAGGTGTTTTTGTCAGTAATGAGACTGGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR GCA 72 bp | CAGACACAGCCCCTCCAGGAGCCACGAGTCAGGACCTaGTCACCACTCAAAGCACGCTTCTCCACCTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QTQPLQEPRVRT*SPLKARFSTSS Trigger: TGAGGAGGTGGAGAAGCGTGCTTTGAGTGGTGAGCAGGTCCTGACTCGTGGCTCCTGGAGGGGCTGTGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR CCA 72 bp | AAGGAAGCACTCGGGCTTTGTCAGCAGGGTGGACCCTaGGGTCCACAGTGGGAACAGTCCCTTCTGGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KEALGLCQQGGP*GPQWEQSLLAS Trigger: AGAGGCCAGAAGGGACTGTTCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAGTGCTTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR GCA 72 bp | CAAGGAATGCAAACAAACACATTCCGCCCTGGCTCTTaGAATCCTCCAGAGACTGAGGCATCCCCTAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QGMQTNTFRPGS*NPPETEASPRD Trigger: GTCCCTAGGGGATGCCTCAGTCTCTGGAGGATTGCAAGAGCCAGGGCGGAATGTGTTTGTTTGCATTCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTTAACAGCCCCAGACTGCACACTAGCAGACACAGCCCCTCCAGGAGCCACACCTTTGTGGCTTTTTaGAGATATTTGTCAGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: PFNSPRLHTSRHSPSRSHTFVAF*RYLSAT Trigger: TGTTGCTGACAAATATCTCAAAAAAGCCACAAAGGT...GTGGCTCCTGGAGGGGCTGTGTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR GCA 72 bp | TGCCTGTGTGAGGTTCTGAGCTTAGGCCCCAGTGAGTaGACACACACACACACACACACACACAAAGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: CLCEVLSLGPSE*THTHTHTHKDK Trigger: TTTATCTTTGTGTGTGTGTGTGTGTGTGTGTGTGCACTCACTGGGGCCTAAGCTCAGAACCTCACACAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR TCA 72 bp | AAGCTCTGCTCAGCATCAAACCTCAGCAGACACATATaGACACAGCAATTGTTTGCAAGAGTCCAGGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: KLCSASNLSRHI*TQQLFARVQDA Trigger: GGCATCCTGGACTCTTGCAAACAATTGCTGTGTTCATATGTGTCTGCTGAGGTTTGATGCTGAGCAGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR TCA 72 bp | CAGAAAACACCTAATGAGTGTGTGAAGACACTGGAGTaGATCTGCTGTCTGTTCTACGCTCAACACCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QKTPNECVKTLE*ICCLFYAQHPE Trigger: CTCTGGGTGTTGAGCGTAGAACAGACAGCAGATTCACTCCAGTGTCTTCACACACTCATTAGGTGTTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR GCA 72 bp | CATATGAACACAGCAATTGTTTGCAAGAGTCCAGGATaGCAAGGAATGCAAACAAACACATTCCGCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: HMNTAIVCKSPG*QGMQTNTFRPG Trigger: GCCAGGGCGGAATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTGTTCATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR TCA 72 bp | AGACTTCACTGGAACAGAAAACACCTAATGAGTGTGTaGAGACACTGGAGTGAATCTGCTGTCTGTTCTACG | + |
|
Preference number: 3 (lower is better) Translates to: RLHWNRKHLMSV*RHWSESAVCST Trigger: CGTAGAACAGACAGCAGATTCACTCCAGTGTCTTCACACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR TCA 72 bp | TCCTGCAAGCAGAGCCAGTATGTCCTTTCATCATCTTaGACTGGCAAACTCTTTTATCCCAACAGTGACATG | + |
|
Preference number: 3 (lower is better) Translates to: SCKQSQYVLSSS*TGKLFYPNSDM Trigger: CATGTCACTGTTGGGATAAAAGAGTTTGCCAGTTCAAGATGATGAAAGGACATACTGGCTCTGCTTGCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR GCA 72 bp | AAACCTCAGCAGACACATATGAACACAGCAATTGTTTaGAAGAGTCCAGGATGCCAAGGAATGCAAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KPQQTHMNTAIV*KSPGCQGMQTN Trigger: GTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTGTTCATATGTGTCTGCTGAGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR TCA 72 bp | GCAAGCACTTACATACCATTTATCCAGTCTCATTACTaGCAAAAACACCTAGACATGTTAGGCATTTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ASTYIPFIQSHY*QKHLDMLGIWA Trigger: GGCCCAAATGCCTAACATGTCTAGGTGTTTTTGTCAGTAATGAGACTGGATAAATGGTATGTAAGTGCTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR TCA 72 bp | ATCATCTTGAACTGGCAAACTCTTTTATCCCAACAGTaGCATGCTTCATTAAACCATGCCCACATTTCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: IILNWQTLLSQQ*HASLNHAHISY Trigger: GTAAGAAATGTGGGCATGGTTTAATGAAGCATGTCACTGTTGGGATAAAAGAGTTTGCCAGTTCAAGATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGAAGCACTCGGGCTTTGTCAGCAGGGTGGACCCTGGGGTCCACAGTGGGAGCAAGGACTAGCACCTaGGGGGCTCGGCCTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGSTRALSAGWTLGSTVGARTST*GARPLF Trigger: GAAGAGAGGCCGAGCCCCTCAGGTGCTAGTCCTTGC...TCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAGTGCTTCCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAGCACTCGGGCTTTGTCAGCAGGGTGGACCCTGGGGTCCACAGTGGGAGTGGCTCCTGAGATGTaGGCCAGAGCAGCTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGSTRALSAGWTLGSTVGVAPEM*ARAAAK Trigger: CTTGGCAGCTGCTCTGGCCCACATCTCAGGAGCCAC...TCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAGTGCTTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGAAGCACTCGGGCTTTGTCAGCAGGGTGGACCCTGGGGTCCACAGTGGGAGAAGCAGTGTCGTCTTaGGGCTCCTCCTCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGSTRALSAGWTLGSTVGEAVSS*GSSSCF Trigger: GAAGCAGGAGGAGGAGCCTCAAGACGACACTGCTTC...TCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAGTGCTTCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | ACAAGCCTGTCCCACTGTGCCCCTTTAACAGCCCCAGACTGCACACTAGCAGACGCTCGGTGGCCACGGTaGGCTGCCAGCGTCTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TSLSHCAPLTAPDCTLADARWPR*AASVSN Trigger: ATTCGAGACGCTGGCAGCTCACCGTGGCCACCGAGC...GTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGGGCACAGTGGGACAGGCTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTTAACAGCCCCAGACTGCACACTAGCAGACACAGCCCCTCCAGGAGCCACGTCCATCCTTCAGCCTaGGGCTTTTCTCTCCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFNSPRLHTSRHSPSRSHVHPSA*GFSLPH Trigger: ATGCGGGAGAGAAAAGCCCCAGGCTGAAGGATGGAC...GTGGCTCCTGGAGGGGCTGTGTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | AGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTAGGCAGGGGCTATGCTTCAGGTCCCTCCAGCTCTaGCTGCTCGGTGGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRDDSQIKNTSSRQGLCFRSLQL*LLGGHG Trigger: ACCGTGGCCACCGAGCAGCCAGAGCTGGAGGGACCT...GAAGCATAGCCCCTGCCTACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | GAAGGAAGCACTCGGGCTTTGTCAGCAGGGTGGACCCTGGGGTCCACAGTGGGACACTTAATCGCCAGGTaGTCCACAGTTATAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGSTRALSAGWTLGSTVGHLIAR*STVIAA Trigger: AGCAGCTATAACTGTGGAGCACCTGGCGATTAAGTG...TCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAGTGCTTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAGCACTCGGGCTTTGTCAGCAGGGTGGACCCTGGGGTCCACAGTGGGAGTCCATTCTTCAGCTTaGGGCTTTTCTCTCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGSTRALSAGWTLGSTVGVHSSA*GFSLQH Trigger: ATGCTGGAGAGAAAAGCCCCAAGCTGAAGAATGGAC...TCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAGTGCTTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | AGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTAGGCAGGGGCTATGCTTCCTGTCCTTCCAGCTCTaGCTGTCCGCCCCGAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRDDSQIKNTSSRQGLCFLSFQL*LSAPND Trigger: ATCGTTCGGGGCGGACAGGCAGAGCTGGAAGGACAG...GAAGCATAGCCCCTGCCTACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAGCACTCGGGCTTTGTCAGCAGGGTGGACCCTGGGGTCCACAGTGGGATTGCTAATTCTCTTGTaGGTGCAAGGACTAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: EGSTRALSAGWTLGSTVGLLILL*VQGLAP Trigger: AGGTGCTAGTCCTTGCACCCACAAGAGAATTAGCAA...TCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAGTGCTTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | ACAAGCCTGTCCCACTGTGCCCCTTTAACAGCCCCAGACTGCACACTAGCAGACCCATTCCCTTCACTTTaGCATCGATGCTCTCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSLSHCAPLTAPDCTLADPFPSL*HRCSRP Trigger: TGGGCGAGAGCATCGATGCCAAAGTGAAGGGAATGG...GTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGGGCACAGTGGGACAGGCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | ATGCAAACAAACACATTCCGCCCTGGCTCTTGCAATCCTCCAGAGACTGAGGCACGTCTGAGCCCAACTTaGCCCCACTGCGGAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MQTNTFRPGSCNPPETEARLSPT*PHCGVF Trigger: GAAAACTCCGCAGTGGGGCCAAGTTGGGCTCAGACG...TGCCTCAGTCTCTGGAGGATTGCAAGAGCCAGGGCGGAATGTGTTTGTTTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAGCACTCGGGCTTTGTCAGCAGGGTGGACCCTGGGGTCCACAGTGGGATTGTTTTCTTTGCTTTaGAGGAAACGGCCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGSTRALSAGWTLGSTVGLFSLL*RKRPLP Trigger: TGGAAGAGGCCGTTTCCTCCAAAGCAAAGAAAACAA...TCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAGTGCTTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | ACAAGCCTGTCCCACTGTGCCCCTTTAACAGCCCCAGACTGCACACTAGCAGACCCCATATCCAACATCTaGTCGACTTCATCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TSLSHCAPLTAPDCTLADPISNI*STSSRT Trigger: TGTCCTGGATGAAGTCGACCAGATGTTGGATATGGG...GTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGGGCACAGTGGGACAGGCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTTAACAGCCCCAGACTGCACACTAGCAGACACAGCCCCTCCAGGAGCCACTCCACTTGTGCTAACTaGTACTCTTCTTTGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFNSPRLHTSRHSPSRSHSTCAN*YSSLFW Trigger: CCAGAACAAAGAAGAGTACCAGTTAGCACAAGTGGA...GTGGCTCCTGGAGGGGCTGTGTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | TCTATATACCCTTGTCTGGAGACTTCACTGGAACAGAAAACACCTAATGAGTGTCTCCTCGGCCCCGTCTaGGCCCAACTTGGCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPCLETSLEQKTPNECLLGPV*AQLGPT Trigger: AGTGGGGCCAAGTTGGGCTCAGACGGGGCCGAGGAG...ACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAGGGTATATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | ACAAGCCTGTCCCACTGTGCCCCTTTAACAGCCCCAGACTGCACACTAGCAGACGAGCATCACTGGAGTTaGATTTCGGTTCAGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSLSHCAPLTAPDCTLADEHHWS*ISVQKV Trigger: AACCTTCTGAACCGAAATCCAACTCCAGTGATGCTC...GTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGGGCACAGTGGGACAGGCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCACGCTTCTCCACCTCCTCACCTGTCACGATCAAAGACACCTTTGTGGCTGCTGACTGCTTGAAATaGCTAATGGCAGTGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KARFSTSSPVTIKDTFVAADCLK*LMAVGG Trigger: GCCTCCCACTGCCATTAGCCATTTCAAGCAGTCAGC...AGCCACAAAGGTGTCTTTGATCGTGACAGGTGAGGAGGTGGAGAAGCGTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | ATGCAAACAAACACATTCCGCCCTGGCTCTTGCAATCCTCCAGAGACTGAGGCACCCCCAGTTTTCCTTTaGGGAAGACCATTCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MQTNTFRPGSCNPPETEAPPVFL*GRPFPS Trigger: TGAAGGGAATGGTCTTCCTCAAAGGAAAACTGGGGG...TGCCTCAGTCTCTGGAGGATTGCAAGAGCCAGGGCGGAATGTGTTTGTTTGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | CACAGCAATTGTTTGCAAGAGTCCAGGATGCCAAGGAATGCAAACAAACACATTCACCCCGCTGTCCTCTaGAAGCACCACGGCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSNCLQESRMPRNANKHIHPAVL*KHHGCH Trigger: ATGGCAGCCGTGGTGCTTTCAGAGGACAGCGGGGTG...AATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | CACAGCAATTGTTTGCAAGAGTCCAGGATGCCAAGGAATGCAAACAAACACATTGTGGGCCAGAGCAGCTaGCAAGGCCTCTACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSNCLQESRMPRNANKHIVGQSS*QGLYSS Trigger: GGAGCTGTAGAGGCCTTGGCAGCTGCTCTGGCCCAC...AATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTTAACAGCCCCAGACTGCACACTAGCAGACACAGCCCCTCCAGGAGCCACCTGTTATTATCTCTTTaGTTTCAGAGTCTGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFNSPRLHTSRHSPSRSHLLLSL*FQSLLA Trigger: AGCAAGCAGACTCTGAAACCAAAGAGATAATAACAG...GTGGCTCCTGGAGGGGCTGTGTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | AGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTAGGCAGGGGCTATGCTTCTTCGGTTCAGAAGGTTaGGAGAGTCCATCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRDDSQIKNTSSRQGLCFFGSEG*ESPSFS Trigger: GCTGAAGGATGGACTCTCCCAACCTTCTGAACCGAA...GAAGCATAGCCCCTGCCTACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCACGCTTCTCCACCTCCTCACCTGTCACGATCAAAGACACCTTTGTGGCTGTTCCTGTCCGTGCCTaGGCAATTAAGTCTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KARFSTSSPVTIKDTFVAVPVRA*AIKSFP Trigger: TGGGAAAGACTTAATTGCCCAGGCACGGACAGGAAC...AGCCACAAAGGTGTCTTTGATCGTGACAGGTGAGGAGGTGGAGAAGCGTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | ATGCAAACAAACACATTCCGCCCTGGCTCTTGCAATCCTCCAGAGACTGAGGCAGGAAACCTTTCAGGGTaGTTTCCCTTTGCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MQTNTFRPGSCNPPETEAGNLSG*FPFASV Trigger: CACAGAAGCAAAGGGAAATCACCCTGAAAGGTTTCC...TGCCTCAGTCTCTGGAGGATTGCAAGAGCCAGGGCGGAATGTGTTTGTTTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | ATGCAAACAAACACATTCCGCCCTGGCTCTTGCAATCCTCCAGAGACTGAGGCAGTTTCAGAGTCTGCTTaGTTCTCAAGGGGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MQTNTFRPGSCNPPETEAVSESA*FSRGSF Trigger: AAAGGAGCCCCTTGAGAAGCAAGCAGACTCTGAAAC...TGCCTCAGTCTCTGGAGGATTGCAAGAGCCAGGGCGGAATGTGTTTGTTTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | AGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTAGGCAGGGGCTATGCTTCTCCCGCATCTCCGCTTaGTTCTTTCCCTTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRDDSQIKNTSSRQGLCFSRISA*FFPFLH Trigger: ATGAAGAAAGGGAAAGAAGCAAGCGGAGATGCGGGA...GAAGCATAGCCCCTGCCTACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCACGCTTCTCCACCTCCTCACCTGTCACGATCAAAGACACCTTTGTGGCTAGGGTGATTTCCCTTTaGTTCTGTGGAATGTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KARFSTSSPVTIKDTFVARVISL*FCGMSP Trigger: TGGCGACATTCCACAGAAGCAAAGGGAAATCACCCT...AGCCACAAAGGTGTCTTTGATCGTGACAGGTGAGGAGGTGGAGAAGCGTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | AGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTAGGCAGGGGCTATGCTTCTCTCCTGTATTTCTGTaGCTGCTTCAGTTCGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: RRDDSQIKNTSSRQGLCFSPVFL*LLQFGH Trigger: ATGTCCGAACTGAAGCAGTCACAGAAATACAGGAGA...GAAGCATAGCCCCTGCCTACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | ACAAGCCTGTCCCACTGTGCCCCTTTAACAGCCCCAGACTGCACACTAGCAGACCCAAAACTCCAAAATTaGCATTTCGGAAACCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSLSHCAPLTAPDCTLADPKLQN*HFGNLS Trigger: TGAAAGGTTTCCGAAATGGCAATTTTGGAGTTTTGG...GTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGGGCACAGTGGGACAGGCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTGTCCATTCTTCAGCTTaGGGCTTTTCTCTCCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSSFCARRDDSQIKNTSSVHSSA*GFSLRH Trigger: ATGCCGGAGAGAAAAGCCCCAAGCTGAAGAATGGAC...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTCTCCACATCCTTTGGTaGGCAGCTCTGAACAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSSFCARRDDSQIKNTSSLHILW*AALNNQ Trigger: TTGGTTGTTCAGAGCTGCCCACCAAAGGATGTGGAG...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | ATGCAAACAAACACATTCCGCCCTGGCTCTTGCAATCCTCCAGAGACTGAGGCAACATTAAACACCCAATaGGGGCAAGTTGCAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MQTNTFRPGSCNPPETEATLNTQ*GQVAEK Trigger: TTTCTCTGCAACTTGCCCTCATTGGGTGTTTAATGT...TGCCTCAGTCTCTGGAGGATTGCAAGAGCCAGGGCGGAATGTGTTTGTTTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | CACAGCAATTGTTTGCAAGAGTCCAGGATGCCAAGGAATGCAAACAAACACATTGTCACAAAGCCTGCTTaGGAGTTGATCAGGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HSNCLQESRMPRNANKHIVTKPA*ELIRER Trigger: GCGCTCCCTGATCAACTCGCAAGCAGGCTTTGTGAC...AATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTATGCTCTCGCCCAGCTaGTCCTTAAGTTCTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSSFCARRDDSQIKNTSSMLSPS*SLSSFQ Trigger: TTGGAAAGAACTTAAGGAGCAGCTGGGCGAGAGCAT...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCACGCTTCTCCACCTCCTCACCTGTCACGATCAAAGACACCTTTGTGGCTCTCCACAGTTATAGCTaGTTTCTGAGTCTTTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: KARFSTSSPVTIKDTFVALHSYS*FLSLFT Trigger: GGTAAAAAGACTCAGAAAGCAGCTATAACTGTGGAG...AGCCACAAAGGTGTCTTTGATCGTGACAGGTGAGGAGGTGGAGAAGCGTGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTAGCTTCTCAGCTGACTaGTTGAAATGGCTAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSSFCARRDDSQIKNTSSSFSAD*LKWLMA Trigger: TGCCATTAGCCATTTCAAGCAGTCAGCTGAGAAGCT...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTCAGCGTCTCGAATCATaGCACTTCTCCTGTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSFCARRDDSQIKNTSSQRLES*HFSCIS Trigger: AGAAATACAGGAGAAGTGGCATGATTCGAGACGCTG...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTTTGCCATTCTGCAAGTaGTCTTTAATACGACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSFCARRDDSQIKNTSSLPFCK*SLIRPG Trigger: CCCAGGTCGTATTAAAGACCACTTGCAGAATGGCAA...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | TCTATATACCCTTGTCTGGAGACTTCACTGGAACAGAAAACACCTAATGAGTGTAGCACCGCAGGATCATaGTCACAAAGCCTGCTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SIYPCLETSLEQKTPNECSTAGS*SQSLLA Trigger: CGCAAGCAGGCTTTGTGACCATGATCCTGCGGTGCT...ACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAGGGTATATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | TCTATATACCCTTGTCTGGAGACTTCACTGGAACAGAAAACACCTAATGAGTGTTCTGTTGCCACCTCCTaGTCGCTGTCCTCGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPCLETSLEQKTPNECSVATS*SLSSEV Trigger: AACTTCCGAGGACAGCGACCAGGAGGTGGCAACAGA...ACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAGGGTATATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTTCTTGTAGCCCACCTTaGAGTTTCTCAATTAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSFCARRDDSQIKNTSSSCSPP*SFSIKG Trigger: CCCTTTAATTGAGAAACTTCAAGGTGGGCTACAAGA...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTAATCAGCTTCTCAGCTaGCTGCTTGAAATGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSSFCARRDDSQIKNTSSNQLLS*LLEMAN Trigger: ATTAGCCATTTCAAGCAGTCAGCTGAGAAGCTGATT...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR CAA 72 bp | CACAAACTATTCAATCAGCTAAGTCTGAAGCGGCTCTaGAAAAGCTCTGCTCAGCATCAAACCTCAGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HKLFNQLSLKRL*KSSAQHQTSAD Trigger: GTCTGCTGAGGTTTGATGCTGAGCAGAGCTTTTCAAGAGCCGCTTCAGACTTAGCTGATTGAATAGTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | TCTATATACCCTTGTCTGGAGACTTCACTGGAACAGAAAACACCTAATGAGTGTGTCTTTAATACGACCTaGGGTCCCAACCAGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPCLETSLEQKTPNECVFNTT*GPNQDI Trigger: GATATCCTGGTTGGGACCCCAGGTCGTATTAAAGAC...ACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAGGGTATATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR CAA 72 bp | TCACCTGTCACGATCAAAGACACCTTTGTGGCTTTTTaGAGATATTTGTCAGCAACACCAACTGAACCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPVTIKDTFVAF*RYLSATPTEPH Trigger: ATGGGGTTCAGTTGGTGTTGCTGACAAATATCTCAAAAAAGCCACAAAGGTGTCTTTGATCGTGACAGGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | CACAGCAATTGTTTGCAAGAGTCCAGGATGCCAAGGAATGCAAACAAACACATTAAAGCTCCCTCTTTCTaGTCCACAGGTATTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSNCLQESRMPRNANKHIKAPSF*STGISF Trigger: AAAGGAAATACCTGTGGAGCAGAAAGAGGGAGCTTT...AATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | GCACACACACACACACACACACACACAAAGATAAAATTACAAGATCGACACACCGGCAGCAACATTGGTTaGCACCAAAACTCCAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: AHTHTHTHTKIKLQDRHTGSNIG*HQNSKI Trigger: AATTTTGGAGTTTTGGTGGCAACCAATGTTGCTGCC...GGTGTGTCGATCTTGTAATTTTATCTTTGTGTGTGTGTGTGTGTGTGTGTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | GCACACACACACACACACACACACACAAAGATAAAATTACAAGATCGACACACCGTTATAGCTGCTTTCTaGGTCTTTTTACCAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHTHTHTHTKIKLQDRHTVIAAF*VFLPIR Trigger: CCTGATTGGTAAAAAGACTCAGAAAGCAGCTATAAC...GGTGTGTCGATCTTGTAATTTTATCTTTGTGTGTGTGTGTGTGTGTGTGTGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCAATTGTTTGCAAGAGTCCAGGATGCCAAGGAATGCAAACAAACACATTGAGAAAAGCAATGTTTaGGGGTTGTCTTCAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HSNCLQESRMPRNANKHIEKSNV*GLSSES Trigger: AGATTCTGAAGACAACCCCCAAACATTGCTTTTCTC...AATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | GCACACACACACACACACACACACACAAAGATAAAATTACAAGATCGACACACCTTTTATTATTTCCGTTaGAGAAGGAACACCTATCCG | + |
|
Preference number: 4 (lower is better) Translates to: AHTHTHTHTKIKLQDRHTFYYFR*RRNTYP Trigger: CGGATAGGTGTTCCTTCTGCAACGGAAATAATAAAA...GGTGTGTCGATCTTGTAATTTTATCTTTGTGTGTGTGTGTGTGTGTGTGTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR GCA 90 bp | TCTATATACCCTTGTCTGGAGACTTCACTGGAACAGAAAACACCTAATGAGTGTCTGTATTTCTGTGACTaGTTCAGTTCGGACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SIYPCLETSLEQKTPNECLYFCD*FSSDIK Trigger: TTTGATGTCCGAACTGAAGCAGTCACAGAAATACAG...ACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAGGGTATATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | TCTATATACCCTTGTCTGGAGACTTCACTGGAACAGAAAACACCTAATGAGTGTTGCTTCTTCGGTCTTTaGTTTTGTCTTCTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPCLETSLEQKTPNECCFFGL*FCLLFS Trigger: AGAAAAGAGAAGACAAAATCAAAGACCGAAGAAGCA...ACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAGGGTATATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR TCA 90 bp | TCTATATACCCTTGTCTGGAGACTTCACTGGAACAGAAAACACCTAATGAGTGTAAGTCTTTGCTCACTTaGTTTGCTAATTCTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIYPCLETSLEQKTPNECKSLLT*FANSLV Trigger: CACAAGAGAATTAGCAAATCAAGTGAGCAAAGACTT...ACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAGGGTATATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| 3UTR CAA 72 bp | TCATTACTGACAAAAACACCTAGACATGTTAGGCATTaGGGCCTGAACTTTACACTGGGTCCTATAAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLLTKTPRHVRH*GLNFTLGPIKM Trigger: CATTTTTATAGGACCCAGTGTAAAGTTCAGGCCCAAATGCCTAACATGTCTAGGTGTTTTTGTCAGTAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS GCA 90 bp | CCCATGCGGCCTCGATATCCGTCTGGAGGTCCCTCCAGCTCTGGCTaGTCGGTGGCCACGGTGAGCTGCCAGCGTCTCGAATCATGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PMRPRYPSGGPSSSG*SVATVSCQRLESCH Trigger: GTGGCATGATTCGAGACGCTGGCAGCTCACCGTGGCCACCGAGCAGCCAGAGCTGGAGGGACCTCCAGACGGATATCGAGGCCGCATGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | GAAGGAAGCACTCGGGCTTTGTCAGCAGGGTGGACCCTGGGGTCCACAGTGGGAGGTCACAAAGCCTGCTaGCGAGTTGATCAGGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: EGSTRALSAGWTLGSTVGGHKAC*RVDQGA Trigger: CGCTCCCTGATCAACTCGCAAGCAGGCTTTGTGACC...TCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAGTGCTTCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS TCA 90 bp | CAATGGAGCACCGCAGGATCATGGTCACAAAGCCTGCTTGCGAGTTaGTCAGGGAGCGCTGATCGACTGATGTGGCTCCTGAGATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QWSTAGSWSQSLLAS*SGSADRLMWLLRCG Trigger: CCCACATCTCAGGAGCCACATCAGTCGATCAGCGCTCCCTGATCAACTCGCAAGCAGGCTTTGTGACCATGATCCTGCGGTGCTCCATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTTAACAGCCCCAGACTGCACACTAGCAGACACAGCCCCTCCAGGAGCCACTTTCGGTTCAGAAGGTaGGGAGAGTCCATCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PFNSPRLHTSRHSPSRSHFRFRR*GESILQ Trigger: CTGAAGGATGGACTCTCCCAACCTTCTGAACCGAAA...GTGGCTCCTGGAGGGGCTGTGTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTTAACAGCCCCAGACTGCACACTAGCAGACACAGCCCCTCCAGGAGCCACTTCACCCCACGAGCTTaGAGAAGCTTGACAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFNSPRLHTSRHSPSRSHFTPRA*RSLTVS Trigger: AGAGACTGTCAAGCTTCTCAAAGCTCGTGGGGTGAA...GTGGCTCCTGGAGGGGCTGTGTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | GAAGGAAGCACTCGGGCTTTGTCAGCAGGGTGGACCCTGGGGTCCACAGTGGGATTGGTGAGATCTAGCTaGCCATTCTGCAAGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EGSTRALSAGWTLGSTVGLVRSS*PFCKWS Trigger: AGACCACTTGCAGAATGGCAAGCTAGATCTCACCAA...TCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAGTGCTTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | GAAGGAAGCACTCGGGCTTTGTCAGCAGGGTGGACCCTGGGGTCCACAGTGGGAAGCCTGATGGCGTCTTaGCTGGAGGCTTTTATTATT | + |
|
Preference number: 5 (lower is better) Translates to: EGSTRALSAGWTLGSTVGSLMAS*LEAFII Trigger: AATAATAAAAGCCTCCAGCAAAGACGCCATCAGGCT...TCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAGTGCTTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 90 bp | TCCTCACCAGGAGCATCACTGGAGTTGGATTTCGGTTCAGAAGGTTaGGAGAGTCCATCCTTCAGCCTGGGGCTTTTCTCTCCCGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SSPGASLELDFGSEG*ESPSFSLGLFSPAS Trigger: AGATGCGGGAGAGAAAAGCCCCAGGCTGAAGGATGGACTCTCCCAACCTTCTGAACCGAAATCCAACTCCAGTGATGCTCCTGGTGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | GAAGGAAGCACTCGGGCTTTGTCAGCAGGGTGGACCCTGGGGTCCACAGTGGGACTTTGCTCACTTGATTaGCTAATTCTCTTGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGSTRALSAGWTLGSTVGLCSLD*LILLWV Trigger: CACCCACAAGAGAATTAGCAAATCAAGTGAGCAAAG...TCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAGTGCTTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTCGCTTCTGGCCTCTGTaGCCACCTCCTGGTCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HSSFCARRDDSQIKNTSSRFWPL*PPPGRC Trigger: ACAGCGACCAGGAGGTGGCAACAGAGGCCAGAAGCG...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 90 bp | ACAGCTCCCTTCTCCTCAATCAGCTTCTCAGCTGACTGCTTGAAATaGCTAATGGCAGTGGGAGGCACAGAATCCAAGAGCCTGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TAPFSSISFSADCLK*LMAVGGTESKSLMA Trigger: CGCCATCAGGCTCTTGGATTCTGTGCCTCCCACTGCCATTAGCCATTTCAAGCAGTCAGCTGAGAAGCTGATTGAGGAGAAGGGAGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTTAACAGCCCCAGACTGCACACTAGCAGACACAGCCCCTCCAGGAGCCACGGCTCCTTTTTCTTCTaGGAGGTTTTGCTTGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PFNSPRLHTSRHSPSRSHGSFFF*EVLLVE Trigger: TTCTACAAGCAAAACCTCCAAGAAGAAAAAGGAGCC...GTGGCTCCTGGAGGGGCTGTGTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | ACAAGCCTGTCCCACTGTGCCCCTTTAACAGCCCCAGACTGCACACTAGCAGACGCTACAGAGAGCTTTTaGGTGATGTCGCTGAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSLSHCAPLTAPDCTLADATESF*VMSLKS Trigger: AGACTTCAGCGACATCACCAAAAAGCTCTCTGTAGC...GTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGGGCACAGTGGGACAGGCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS TCA 90 bp | TGCCAAGGCCTCTACAGCTCCCTTCTCCTCAATCAGCTTCTCAGCTaGCTGCTTGAAATGGCTAATGGCAGTGGGAGGCACAGAATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CQGLYSSLLLNQLLS*LLEMANGSGRHRIQ Trigger: TTGGATTCTGTGCCTCCCACTGCCATTAGCCATTTCAAGCAGTCAGCTGAGAAGCTGATTGAGGAGAAGGGAGCTGTAGAGGCCTTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS GCA 90 bp | AAGGCCTCTACAGCTCCCTTCTCCTCAATCAGCTTCTCAGCTGACTaGTTGAAATGGCTAATGGCAGTGGGAGGCACAGAATCCAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KASTAPFSSISFSAD*LKWLMAVGGTESKS Trigger: GCTCTTGGATTCTGTGCCTCCCACTGCCATTAGCCATTTCAAGCAGTCAGCTGAGAAGCTGATTGAGGAGAAGGGAGCTGTAGAGGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 90 bp | AGTTGGATTTCGGTTCAGAAGGTTGGGAGAGTCCATCCTTCAGCCTaGGGCTTTTCTCTCCCGCATCTCCGCTTGCTTCTTTCCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWISVQKVGRVHPSA*GFSLPHLRLLLSLS Trigger: AGAAAGGGAAAGAAGCAAGCGGAGATGCGGGAGAGAAAAGCCCCAGGCTGAAGGATGGACTCTCCCAACCTTCTGAACCGAAATCCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | ACAAGCCTGTCCCACTGTGCCCCTTTAACAGCCCCAGACTGCACACTAGCAGACCCTTTCTTCATCTTCTaGGGCTTAGGAATGTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: TSLSHCAPLTAPDCTLADPFFIF*GLGMST Trigger: GGTAGACATTCCTAAGCCCAAGAAGATGAAGAAAGG...GTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGGGCACAGTGGGACAGGCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | ATGCAAACAAACACATTCCGCCCTGGCTCTTGCAATCCTCCAGAGACTGAGGCACTCCCGCATCTCCGCTaGCTTCTTTCCCTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MQTNTFRPGSCNPPETEALPHLR*LLSLSS Trigger: TGAAGAAAGGGAAAGAAGCAAGCGGAGATGCGGGAG...TGCCTCAGTCTCTGGAGGATTGCAAGAGCCAGGGCGGAATGTGTTTGTTTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 90 bp | TGTCTGCCTCTTCTTCGGAAGGTTGGGAGAGTCCATTCTTCAGCTTaGGGCTTTTCTCTCCGGCATCTCCGTTTGCTTCTTTCCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLPLLRKVGRVHSSA*GFSLRHLRLLLSLS Trigger: AGAAAGGGAAAGAAGCAAACGGAGATGCCGGAGAGAAAAGCCCCAAGCTGAAGAATGGACTCTCCCAACCTTCCGAAGAAGAGGCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCACGCTTCTCCACCTCCTCACCTGTCACGATCAAAGACACCTTTGTGGCTCTCCGGCATCTCCGTTaGCTTCTTTCCCTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KARFSTSSPVTIKDTFVALRHLR*LLSLSS Trigger: TGAAGAAAGGGAAAGAAGCAAACGGAGATGCCGGAG...AGCCACAAAGGTGTCTTTGATCGTGACAGGTGAGGAGGTGGAGAAGCGTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTACCATTCCCTTCACTTaGGCATCGATGCTCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSSFCARRDDSQIKNTSSTIPFT*ASMLSP Trigger: GGGCGAGAGCATCGATGCCAAAGTGAAGGGAATGGT...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | AGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTAGGCAGGGGCTATGCTTCACCCCCAGTTTTCCTTaGAGGAAGACCATTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRDDSQIKNTSSRQGLCFTPSFP*RKTIPF Trigger: GAAGGGAATGGTCTTCCTCAAAGGAAAACTGGGGGT...GAAGCATAGCCCCTGCCTACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS GCA 90 bp | CTTTGTTCTGGTAAAAGCAGATGCAAACTCCTGTCCTTCCAGCTCTaGCTGTCCGCCCCGAACGATGAATGTAAGACTCCACATCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCSGKSRCKLLSFQL*LSAPNDECKTPHPL Trigger: CAAAGGATGTGGAGTCTTACATTCATCGTTCGGGGCGGACAGGCAGAGCTGGAAGGACAGGAGTTTGCATCTGCTTTTACCAGAACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | ATGCAAACAAACACATTCCGCCCTGGCTCTTGCAATCCTCCAGAGACTGAGGCACTCCAGCATCTCCGTTaGCTTCTTTCCCTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MQTNTFRPGSCNPPETEALQHLR*LLSLSS Trigger: TGAAGAAAGGGAAAGAAGCAAACGGAGATGCTGGAG...TGCCTCAGTCTCTGGAGGATTGCAAGAGCCAGGGCGGAATGTGTTTGTTTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTCAGGGTGATTTCCCTTaGCTTCTGTGGAATGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSSFCARRDDSQIKNTSSQGDFP*LLWNVA Trigger: GGCGACATTCCACAGAAGCAAAGGGAAATCACCCTG...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS TCA 90 bp | ATGTCGCCATGTAAGGACTGGGCATCCTGCTTTATGCACGTGTTCTaGGATAGCTCCTGGGCATCCTTCTTGGTTTCACAGAAGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: MSPCKDWASCFMHVF*DSSWASFLVSQKMI Trigger: GATCATCTTCTGTGAAACCAAGAAGGATGCCCAGGAGCTATCTCAGAACACGTGCATAAAGCAGGATGCCCAGTCCTTACATGGCGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 90 bp | TGTCTACCTCTTCTTCGGAAGGTTGGGAGAGTCCATTCTTCAGCTTaGGGCTTTTCTCTCCAGCATCTCCGTTTGCTTCTTTCCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLPLLRKVGRVHSSA*GFSLQHLRLLLSLS Trigger: AGAAAGGGAAAGAAGCAAACGGAGATGCTGGAGAGAAAAGCCCCAAGCTGAAGAATGGACTCTCCCAACCTTCCGAAGAAGAGGTAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | ATGCAAACAAACACATTCCGCCCTGGCTCTTGCAATCCTCCAGAGACTGAGGCATTTGTTTTCTTTGCTTaGGAGGAAACGGCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MQTNTFRPGSCNPPETEAFVFFA*EETASS Trigger: GGAAGAGGCCGTTTCCTCCAAAGCAAAGAAAACAAA...TGCCTCAGTCTCTGGAGGATTGCAAGAGCCAGGGCGGAATGTGTTTGTTTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTAGTCCATTCTTCAGCTaGGGGCTTTTCTCTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HSSFCARRDDSQIKNTSSSPFFS*GLFSPA Trigger: TGCTGGAGAGAAAAGCCCCAAGCTGAAGAATGGACT...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | CACTCAAGCTTCTGTGCTAGGCGGGATGATTCCCAAATAAAGAACACCAGCAGTAAGACTCCACATCCTTaGGTGGGCAGCTCTGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: HSSFCARRDDSQIKNTSSKTPHP*VGSSEQ Trigger: TTGTTCAGAGCTGCCCACCAAAGGATGTGGAGTCTT...ACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | CACAGCAATTGTTTGCAAGAGTCCAGGATGCCAAGGAATGCAAACAAACACATTTCCTCCTCCTGCTTCTaGGCCTTCCTGGATTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSNCLQESRMPRNANKHISSSCF*AFLDLG Trigger: CCCTAAATCCAGGAAGGCCAAGAAGCAGGAGGAGGA...AATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | GCACACACACACACACACACACACACAAAGATAAAATTACAAGATCGACACACCAGAAGCAGTGTCGTCTaGAGGCTCCTCCTCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AHTHTHTHTKIKLQDRHTRSSVV*RLLLLL Trigger: AAGCAGGAGGAGGAGCCTCAAGACGACACTGCTTCT...GGTGTGTCGATCTTGTAATTTTATCTTTGTGTGTGTGTGTGTGTGTGTGTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS GCA 90 bp | ACTCCAAAATTGCCATTTCGGAAACCTTTCAGGGTGATTTCCCTTTaGTTCTGTGGAATGTCGCCATGTAAGGACTGGGCATCCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPKLPFRKPFRVISL*FCGMSPCKDWASCF Trigger: AAAGCAGGATGCCCAGTCCTTACATGGCGACATTCCACAGAAGCAAAGGGAAATCACCCTGAAAGGTTTCCGAAATGGCAATTTTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 90 bp | GCATGTCTGCCTCTTCTTCGGAAGGCTCCTCTGTTATTATCTCTTTaGTTTCAGAGTCTGCTTGCTTCTCAAGGGGCTCCTTTTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ACLPLLRKAPLLLSL*FQSLLASQGAPFSS Trigger: AGAAGAAAAAGGAGCCCCTTGAGAAGCAAGCAGACTCTGAAACCAAAGAGATAATAACAGAGGAGCCTTCCGAAGAAGAGGCAGACATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | GCACACACACACACACACACACACACAAAGATAAAATTACAAGATCGACACACCAGTCCATTCTTCAGCTaGGGGCTTTTCTCTCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AHTHTHTHTKIKLQDRHTSPFFS*GLFSPA Trigger: TGCCGGAGAGAAAAGCCCCAAGCTGAAGAATGGACT...GGTGTGTCGATCTTGTAATTTTATCTTTGTGTGTGTGTGTGTGTGTGTGTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | ATGCAAACAAACACATTCCGCCCTGGCTCTTGCAATCCTCCAGAGACTGAGGCAACCAAAACTCCAAAATaGCCATTTCGGAAACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MQTNTFRPGSCNPPETEATKTPK*PFRKPF Trigger: GAAAGGTTTCCGAAATGGCAATTTTGGAGTTTTGGT...TGCCTCAGTCTCTGGAGGATTGCAAGAGCCAGGGCGGAATGTGTTTGTTTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS GCA 90 bp | TCCAGGACAACATGTTTAAGTTTGGTGAGATCTAGCTTGCCATTCTaGAAGTGGTCTTTAATACGACCTGGGGTCCCAACCAGGATATCA | + |
|
Preference number: 5 (lower is better) Translates to: SRTTCLSLVRSSLPF*KWSLIRPGVPTRIS Trigger: TGATATCCTGGTTGGGACCCCAGGTCGTATTAAAGACCACTTGCAGAATGGCAAGCTAGATCTCACCAAACTTAAACATGTTGTCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS GCA 90 bp | TTCTGTCCAGTGACACTTAATCGCCAGGTGCTCCACAGTTATAGCTaGTTTCTGAGTCTTTTTACCAATCAGGTCCACCTGTTCGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: FCPVTLNRQVLHSYS*FLSLFTNQVHLFVC Trigger: ACATACGAACAGGTGGACCTGATTGGTAAAAAGACTCAGAAAGCAGCTATAACTGTGGAGCACCTGGCGATTAAGTGTCACTGGACAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 90 bp | ACAACATGTTTAAGTTTGGTGAGATCTAGCTTGCCATTCTGCAAGTaGTCTTTAATACGACCTGGGGTCCCAACCAGGATATCAATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TTCLSLVRSSLPFCK*SLIRPGVPTRISIP Trigger: TGGGATTGATATCCTGGTTGGGACCCCAGGTCGTATTAAAGACCACTTGCAGAATGGCAAGCTAGATCTCACCAAACTTAAACATGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | TCTATATACCCTTGTCTGGAGACTTCACTGGAACAGAAAACACCTAATGAGTGTCCTTTCTTCATCTTCTaGGGCTTAGGCATGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SIYPCLETSLEQKTPNECPFFIF*GLGMSA Trigger: GGCAGACATGCCTAAGCCCAAGAAGATGAAGAAAGG...ACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAGGGTATATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | GCACACACACACACACACACACACACAAAGATAAAATTACAAGATCGACACACCCCTTTCTTCATCTTCTaGGGCTTAGGAATGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AHTHTHTHTKIKLQDRHTPFFIF*GLGMSA Trigger: GGCAGACATTCCTAAGCCCAAGAAGATGAAGAAAGG...GGTGTGTCGATCTTGTAATTTTATCTTTGTGTGTGTGTGTGTGTGTGTGTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | CACAGCAATTGTTTGCAAGAGTCCAGGATGCCAAGGAATGCAAACAAACACATTTTCTCAGCTGACTGCTaGAAATGGCTAATGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HSNCLQESRMPRNANKHIFSADC*KWLMAV Trigger: CACTGCCATTAGCCATTTCAAGCAGTCAGCTGAGAA...AATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | TCTATATACCCTTGTCTGGAGACTTCACTGGAACAGAAAACACCTAATGAGTGTCTTCCATTCCTTCTGTaGCTTCTTCGGTCTTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SIYPCLETSLEQKTPNECLPFLL*LLRSLI Trigger: AATCAAAGACCGAAGAAGCAACAGAAGGAATGGAAG...ACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAGGGTATATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS-3UTR CAA 90 bp | CACAGCAATTGTTTGCAAGAGTCCAGGATGCCAAGGAATGCAAACAAACACATTTCTGTTATTATCTCTTaGGTTTCAGAGTCTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSNCLQESRMPRNANKHISVIIS*VSESAC Trigger: GCAAGCAGACTCTGAAACCAAAGAGATAATAACAGA...AATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 72 bp | GCCATCACGCTGACCCATGCGGCCTCGATATCCGTCTaGAGGTCCCTCCAGCTCTGGCTGCTCGGTGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AITLTHAASISV*RSLQLWLLGGH Trigger: GTGGCCACCGAGCAGCCAGAGCTGGAGGGACCTCCAGACGGATATCGAGGCCGCATGGGTCAGCGTGATGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS GCA 72 bp | CCTCGATATCCGTCTGGAGGTCCCTCCAGCTCTGGCTaGTCGGTGGCCACGGTGAGCTGCCAGCGTCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: PRYPSGGPSSSG*SVATVSCQRLE Trigger: TTCGAGACGCTGGCAGCTCACCGTGGCCACCGAGCAGCCAGAGCTGGAGGGACCTCCAGACGGATATCGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS TCA 72 bp | GTCACAAAGCCTGCTTGCGAGTTGATCAGGGAGCGCTaGTCGACTGATGTGGCTCCTGAGATGTGGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VTKPACELIRER*STDVAPEMWAR Trigger: TCTGGCCCACATCTCAGGAGCCACATCAGTCGATCAGCGCTCCCTGATCAACTCGCAAGCAGGCTTTGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 90 bp | TTCCTCACCAGGAGCATCACTGGAGTTGGATTTCGGTTCAGAAGGTaGGGAGAGTCCATCCTTCAGCCTGGGGCTTTTCTCTCCCGCATC | + |
|
Preference number: 6 (lower is better) Translates to: FLTRSITGVGFRFRR*GESILQPGAFLSRI Trigger: GATGCGGGAGAGAAAAGCCCCAGGCTGAAGGATGGACTCTCCCAACCTTCTGAACCGAAATCCAACTCCAGTGATGCTCCTGGTGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 90 bp | CTCCTGGGCATCCTTCTTGGTTTCACAGAAGATGATCGTGCGCCCTaGATGACCACTGTACACTCGGATCACATCCCCAATCACCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLGILLGFTEDDRAP*MTTVHSDHIPNHRC Trigger: GCAGCGGTGATTGGGGATGTGATCCGAGTGTACAGTGGTCATCAAGGGCGCACGATCATCTTCTGTGAAACCAAGAAGGATGCCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS TCA 72 bp | CTCTACAGCTCCCTTCTCCTCAATCAGCTTCTCAGCTaGCTGCTTGAAATGGCTAATGGCAGTGGGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LYSSLLLNQLLS*LLEMANGSGRH Trigger: GTGCCTCCCACTGCCATTAGCCATTTCAAGCAGTCAGCTGAGAAGCTGATTGAGGAGAAGGGAGCTGTAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS GCA 72 bp | GGTAAAAGCAGATGCAAACTCCTGTCCTTCCAGCTCTaGCTGTCCGCCCCGAACGATGAATGTAAGACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GKSRCKLLSFQL*LSAPNDECKTP Trigger: TGGAGTCTTACATTCATCGTTCGGGGCGGACAGGCAGAGCTGGAAGGACAGGAGTTTGCATCTGCTTTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 72 bp | GGAGCATCACTGGAGTTGGATTTCGGTTCAGAAGGTTaGGAGAGTCCATCCTTCAGCCTGGGGCTTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GASLELDFGSEG*ESPSFSLGLFS Trigger: AGAGAAAAGCCCCAGGCTGAAGGATGGACTCTCCCAACCTTCTGAACCGAAATCCAACTCCAGTGATGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 72 bp | AGGAGCATCACTGGAGTTGGATTTCGGTTCAGAAGGTaGGGAGAGTCCATCCTTCAGCCTGGGGCTTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSITGVGFRFRR*GESILQPGAFL Trigger: GAGAAAAGCCCCAGGCTGAAGGATGGACTCTCCCAACCTTCTGAACCGAAATCCAACTCCAGTGATGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 72 bp | TCCGCCCCGAACGATGAATGTAAGACTCCACATCCTTaGGTGGGCAGCTCTGAACAACCAAGTCAACCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SAPNDECKTPHP*VGSSEQPSQPQ Trigger: CTGAGGTTGACTTGGTTGTTCAGAGCTGCCCACCAAAGGATGTGGAGTCTTACATTCATCGTTCGGGGCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 72 bp | CCAAACGCTTTACTAAAACTCCGCTTCTGGCCTCTGTaGCCACCTCCTGGTCGCTGTCCTCGGAAGTTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: PNALLKLRFWPL*PPPGRCPRKFL Trigger: TAGAAACTTCCGAGGACAGCGACCAGGAGGTGGCAACAGAGGCCAGAAGCGGAGTTTTAGTAAAGCGTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 90 bp | ATGTCTGCCTCTTCTTCGGAAGGTTGGGAGAGTCCATTCTTCAGCTaGGGGCTTTTCTCTCCGGCATCTCCGTTTGCTTCTTTCCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: MSASSSEGWESPFFS*GLFSPASPFASFPF Trigger: GAAAGGGAAAGAAGCAAACGGAGATGCCGGAGAGAAAAGCCCCAAGCTGAAGAATGGACTCTCCCAACCTTCCGAAGAAGAGGCAGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS TCA 72 bp | TTCTTGGAGGTTTTGCTTGTAGAAGCAGTGTCGTCTTaGGGCTCCTCCTCCTGCTTCTTGGCCTTCCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FLEVLLVEAVSS*GSSSCFLAFLD Trigger: ATCCAGGAAGGCCAAGAAGCAGGAGGAGGAGCCTCAAGACGACACTGCTTCTACAAGCAAAACCTCCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS TCA 72 bp | ATCACATCCCCAATCACCGCTGCCCTTTCTGTCCAGTaGCACTTAATCGCCAGGTGCTCCACAGTTATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ITSPITAALSVQ*HLIARCSTVIA Trigger: AGCTATAACTGTGGAGCACCTGGCGATTAAGTGTCACTGGACAGAAAGGGCAGCGGTGATTGGGGATGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 72 bp | CCCAGTTTTCCTTTGAGGAAGACCATTCCCTTCACTTaGGCATCGATGCTCTCGCCCAGCTGCTCCTTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSFPLRKTIPFT*ASMLSPSCSLS Trigger: ACTTAAGGAGCAGCTGGGCGAGAGCATCGATGCCAAAGTGAAGGGAATGGTCTTCCTCAAAGGAAAACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 72 bp | TTGGGCTTAGGAATGTCTGCCTCTTCTTCGGAAGGTTaGGAGAGTCCATTCTTCAGCTTGGGGCTTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGLGMSASSSEG*ESPFFSLGLFS Trigger: AGAGAAAAGCCCCAAGCTGAAGAATGGACTCTCCCAACCTTCCGAAGAAGAGGCAGACATTCCTAAGCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 72 bp | TTCTCCTCAATCAGCTTCTCAGCTGACTGCTTGAAATaGCTAATGGCAGTGGGAGGCACAGAATCCAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSSISFSADCLK*LMAVGGTESKS Trigger: GCTCTTGGATTCTGTGCCTCCCACTGCCATTAGCCATTTCAAGCAGTCAGCTGAGAAGCTGATTGAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 72 bp | GCCTCTTCTTCGGAAGGCTCCTCTGTTATTATCTCTTaGGTTTCAGAGTCTGCTTGCTTCTCAAGGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASSSEGSSVIIS*VSESACFSRGS Trigger: GGAGCCCCTTGAGAAGCAAGCAGACTCTGAAACCAAAGAGATAATAACAGAGGAGCCTTCCGAAGAAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 90 bp | ATGTCTACCTCTTCTTCGGAAGGTTGGGAGAGTCCATTCTTCAGCTaGGGGCTTTTCTCTCCAGCATCTCCGTTTGCTTCTTTCCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: MSTSSSEGWESPFFS*GLFSPASPFASFPF Trigger: GAAAGGGAAAGAAGCAAACGGAGATGCTGGAGAGAAAAGCCCCAAGCTGAAGAATGGACTCTCCCAACCTTCCGAAGAAGAGGTAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS TCA 72 bp | GGGGCTCGGCCTCTCTTCCTCTCTTGTAGCCCACCTTaGAGTTTCTCAATTAAAGGGATGGCAAAAGAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GARPLFLSCSPP*SFSIKGMAKEN Trigger: ATTCTCTTTTGCCATCCCTTTAATTGAGAAACTTCAAGGTGGGCTACAAGAGAGGAAGAGAGGCCGAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 72 bp | TTGGGCTTAGGAATGTCTACCTCTTCTTCGGAAGGTTaGGAGAGTCCATTCTTCAGCTTGGGGCTTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGLGMSTSSSEG*ESPFFSLGLFS Trigger: AGAGAAAAGCCCCAAGCTGAAGAATGGACTCTCCCAACCTTCCGAAGAAGAGGTAGACATTCCTAAGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 90 bp | GGCATGTCTGCCTCTTCTTCGGAAGGCTCCTCTGTTATTATCTCTTaGGTTTCAGAGTCTGCTTGCTTCTCAAGGGGCTCCTTTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GMSASSSEGSSVIIS*VSESACFSRGSFFF Trigger: GAAGAAAAAGGAGCCCCTTGAGAAGCAAGCAGACTCTGAAACCAAAGAGATAATAACAGAGGAGCCTTCCGAAGAAGAGGCAGACATGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 90 bp | AAACAAACCCCCAGTTTTCCTTTGAGGAAGACCATTCCCTTCACTTaGGCATCGATGCTCTCGCCCAGCTGCTCCTTAAGTTCTTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: KQTPSFPLRKTIPFT*ASMLSPSCSLSSFQ Trigger: TTGGAAAGAACTTAAGGAGCAGCTGGGCGAGAGCATCGATGCCAAAGTGAAGGGAATGGTCTTCCTCAAAGGAAAACTGGGGGTTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 90 bp | GGGGATCCACATCATCCTCAGAAGGCCCTTTCTTGTTTGTTTTCTTaGCTTTGGAGGAAACGGCCTCTTCCATTCCTTCTGTTGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GDPHHPQKALSCLFS*LWRKRPLPFLLLLL Trigger: AAGAAGCAACAGAAGGAATGGAAGAGGCCGTTTCCTCCAAAGCAAAGAAAACAAACAAGAAAGGGCCTTCTGAGGATGATGTGGATCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 90 bp | TCGACTTCATCCAGGACAACATGTTTAAGTTTGGTGAGATCTAGCTaGCCATTCTGCAAGTGGTCTTTAATACGACCTGGGGTCCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: STSSRTTCLSLVRSS*PFCKWSLIRPGVPT Trigger: GGTTGGGACCCCAGGTCGTATTAAAGACCACTTGCAGAATGGCAAGCTAGATCTCACCAAACTTAAACATGTTGTCCTGGATGAAGTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS GCA 72 bp | GTGACACTTAATCGCCAGGTGCTCCACAGTTATAGCTaGTTTCTGAGTCTTTTTACCAATCAGGTCCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: VTLNRQVLHSYS*FLSLFTNQVHL Trigger: CAGGTGGACCTGATTGGTAAAAAGACTCAGAAAGCAGCTATAACTGTGGAGCACCTGGCGATTAAGTGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS GCA 72 bp | TTTCCCTTTCTTCATCTTCTTGGGCTTAGGAATGTCTaGCTCTTCTTCGGAAGGTTGGGAGAGTCCATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FPFLHLLGLRNV*LFFGRLGESIL Trigger: AAGAATGGACTCTCCCAACCTTCCGAAGAAGAGGCAGACATTCCTAAGCCCAAGAAGATGAAGAAAGGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS GCA 72 bp | ACATGTTTAAGTTTGGTGAGATCTAGCTTGCCATTCTaGAAGTGGTCTTTAATACGACCTGGGGTCCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: TCLSLVRSSLPF*KWSLIRPGVPT Trigger: GGTTGGGACCCCAGGTCGTATTAAAGACCACTTGCAGAATGGCAAGCTAGATCTCACCAAACTTAAACATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CCA 72 bp | TTAAGTTTGGTGAGATCTAGCTTGCCATTCTGCAAGTaGTCTTTAATACGACCTGGGGTCCCAACCAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: LSLVRSSLPFCK*SLIRPGVPTRI Trigger: TATCCTGGTTGGGACCCCAGGTCGTATTAAAGACCACTTGCAGAATGGCAAGCTAGATCTCACCAAACTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 72 bp | GTCTTTCCCACTGTACACATGATGAAAGGTCTTGGCTaGTATAGGAAACAGGAAGTTCACCCCACGAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VFPTVHMMKGLG*YRKQEVHPTSF Trigger: AAAGCTCGTGGGGTGAACTTCCTGTTTCCTATACAAGCCAAGACCTTTCATCATGTGTACAGTGGGAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 72 bp | TCCAGGACAACATGTTTAAGTTTGGTGAGATCTAGCTaGCCATTCTGCAAGTGGTCTTTAATACGACCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRTTCLSLVRSS*PFCKWSLIRPG Trigger: CCCAGGTCGTATTAAAGACCACTTGCAGAATGGCAAGCTAGATCTCACCAAACTTAAACATGTTGTCCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS TCA 72 bp | AAACTCCAAAATTGCCATTTCGGAAACCTTTCAGGGTaGTTTCCCTTTGCTTCTGTGGAATGTCGCCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: KLQNCHFGNLSG*FPFASVECRHV Trigger: TACATGGCGACATTCCACAGAAGCAAAGGGAAATCACCCTGAAAGGTTTCCGAAATGGCAATTTTGGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 72 bp | TTGCTTTGGAGGAAACGGCCTCTTCCATTCCTTCTGTaGCTTCTTCGGTCTTTGATTTTGTCTTCTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLWRKRPLPFLL*LLRSLILSSLF Trigger: GAAAAGAGAAGACAAAATCAAAGACCGAAGAAGCAACAGAAGGAATGGAAGAGGCCGTTTCCTCCAAAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS GCA 72 bp | GGAACACCTATCCGTTTAAATTTAATTCCCGCTTTCTaGTCCACTTGTGCTAACTGGTACTCTTCTTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GTPIRLNLIPAF*STCANWYSSLF Trigger: GAACAAAGAAGAGTACCAGTTAGCACAAGTGGAGCAGAAAGCGGGAATTAAATTTAAACGGATAGGTGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||
| CDS CAA 90 bp | ATATCCAACATCTGGTCGACTTCATCCAGGACAACATGTTTAAGTTaGGTGAGATCTAGCTTGCCATTCTGCAAGTGGTCTTTAATACGA | + |
|
Preference number: 6 (lower is better) Translates to: ISNIWSTSSRTTCLS*VRSSLPFCKWSLIR Trigger: TCGTATTAAAGACCACTTGCAGAATGGCAAGCTAGATCTCACCAAACTTAAACATGTTGTCCTGGATGAAGTCGACCAGATGTTGGATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045866.9 |
||