Pregenerated sensors for DDX19B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033658Ensembl transcript IDs: ENSMUST00000040241.15, ENSMUST00000065784.6
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGTGTTGATCTACACTCCCACCAGAAGCCACTGGAGGGGCTGCTaGTCGCCTTGCCCAGTCTCCTTCTCAGACTCAGGGAAGAGTCAT | + |
|
Preference number: 1 (lower is better) Translates to: GVLIYTPTRSHWRGC*SPCPVSFSDSGKSH Trigger: ATGACTCTTCCCTGAGTCTGAGAAGGAGACTGGGCAAGGCGAGCAGCAGCCCCTCCAGTGGCTTCTGGTGGGAGTGTAGATCAACACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 90 bp | ATCTACACTCCCACCAGAAGCCACTGGAGGGGCTGCTGCTCGCCTTaGCCAGTCTCCTTCTCAGACTCAGGGAAGAGTCATACACTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: IYTPTRSHWRGCCSP*PVSFSDSGKSHTLL Trigger: GAGAAGTGTATGACTCTTCCCTGAGTCTGAGAAGGAGACTGGGCAAGGCGAGCAGCAGCCCCTCCAGTGGCTTCTGGTGGGAGTGTAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR CCA 90 bp | CACAGGCCAACTCCAGTGCCTTGTGCCATCTTCCTGACACACGACTaGCTTATATCCTCCTCCTCCCTGAGGACTCTGCCTCTACGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: HRPTPVPCAIFLTHD*LISSSSLRTLPLRA Trigger: AGCACGTAGAGGCAGAGTCCTCAGGGAGGAGGAGGATATAAGCCAGTCGTGTGTCAGGAAGATGGCACAAGGCACTGGAGTTGGCCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR TCA 90 bp | AAACTGAACAGCAGCAGCAGCAGCAGCATTTTATCCTGTGAACCCTaGCTTTCCCACACAGGGCCACCTGAGCTGTGTTCCCAGGGGATC | + |
|
Preference number: 1 (lower is better) Translates to: KLNSSSSSSILSCEP*LSHTGPPELCSQGI Trigger: GATCCCCTGGGAACACAGCTCAGGTGGCCCTGTGTGGGAAAGTCAGGGTTCACAGGATAAAATGCTGCTGCTGCTGCTGCTGTTCAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 90 bp | ACGCTGATTTCAGAATCCCTCATCCTGCTGCTAATGCTCTCATGTTaGTGTCTCCCTCCAGGCCTGCAGGCTCACCTGTCCTCAGACTAC | + |
|
Preference number: 1 (lower is better) Translates to: TLISESLILLLMLSC*CLPPGLQAHLSSDY Trigger: GTAGTCTGAGGACAGGTGAGCCTGCAGGCCTGGAGGGAGACATCAACATGAGAGCATTAGCAGCAGGATGAGGGATTCTGAAATCAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR CCA 90 bp | GTCCTCAGACTACTCAGCCCTGGCTACTCCGTCACAGCAGGACACTaGACTGTGAGACAGTCAAAATTTAGTTGCCAGGTCATAGTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: VLRLLSPGYSVTAGH*TVRQSKFSCQVIVA Trigger: AGCCACTATGACCTGGCAACTAAATTTTGACTGTCTCACAGTCCAGTGTCCTGCTGTGACGGAGTAGCCAGGGCTGAGTAGTCTGAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 90 bp | AGTCTAGTGTCTCTAAAAGAGGATCAAGAGAAACTTGAGAGTCCATaGAGCCTTCAGCATTACCTCGAGTGGTGTGGGCAGAGGAGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: SLVSLKEDQEKLESP*SLQHYLEWCGQRRQ Trigger: CTGCCTCCTCTGCCCACACCACTCGAGGTAATGCTGAAGGCTTCATGGACTCTCAAGTTTCTCTTGATCCTCTTTTAGAGACACTAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 90 bp | AACACAGACCATCAGAATCCCTTTAGAGCCACGTTGCCCAATATCTaGAGTCACTCCCCAGCTCTGACAGGACTAATCTTTCAGGAACTG | + |
|
Preference number: 1 (lower is better) Translates to: NTDHQNPFRATLPNI*SHSPALTGLIFQEL Trigger: CAGTTCCTGAAAGATTAGTCCTGTCAGAGCTGGGGAGTGACTGCAGATATTGGGCAACGTGGCTCTAAAGGGATTCTGATGGTCTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CCA 90 bp | CAGCAAGTACTTGTTGATTACTCATTGTGGACAGACAAACGGCTGTaGTCCGTCCTGTCCCTCATCACACTCACTGTGAACACAGACCAT | + |
|
Preference number: 1 (lower is better) Translates to: QQVLVDYSLWTDKRL*SVLSLITLTVNTDH Trigger: ATGGTCTGTGTTCACAGTGAGTGTGATGAGGGACAGGACGGACCACAGCCGTTTGTCTGTCCACAATGAGTAATCAACAAGTACTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR TCA 90 bp | ACAAGCCCTAGAGAGAAGACTCACCCCATGTCCAAGTCAAAGAACTaGAGAGGATGCTTCTCAATCCCTCCACATTGCTGTCACTCTGTA | + |
|
Preference number: 1 (lower is better) Translates to: TSPREKTHPMSKSKN*RGCFSIPPHCCHSV Trigger: TACAGAGTGACAGCAATGTGGAGGGATTGAGAAGCATCCTCTTCAGTTCTTTGACTTGGACATGGGGTGAGTCTTCTCTCTAGGGCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR TCA 90 bp | ACTCAGGAGCTAAAGGCAGGTGGATCTTGGAGTTCAAAGCCAGCCTaGTCTACTATAGAGCAAATTCCAGGACAGCCAGGGATACACAAA | + |
|
Preference number: 1 (lower is better) Translates to: TQELKAGGSWSSKPA*STIEQIPGQPGIHK Trigger: TTTGTGTATCCCTGGCTGTCCTGGAATTTGCTCTATAGTAGATCAGGCTGGCTTTGAACTCCAAGATCCACCTGCCTTTAGCTCCTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 90 bp | AACACAGCTAAGGCTGGCCTGTTTCTAAGTAACCCAGGCTGGCTTTaGACTCAGCAATACTGTCTCAGCCTCCTGAGTGCTGCAATTATA | + |
|
Preference number: 1 (lower is better) Translates to: NTAKAGLFLSNPGWL*TQQYCLSLLSAAII Trigger: TATAATTGCAGCACTCAGGAGGCTGAGACAGTATTGCTGAGTTCAAAGCCAGCCTGGGTTACTTAGAAACAGGCCAGCCTTAGCTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 90 bp | GAGTGTGGGCTGGGAAAGAGTATGGTCCACATGACACTAGTGACATaGCAGAGCCATTCACAATGTAGGACTCACCTTTTTAAAAGGTGG | + |
|
Preference number: 1 (lower is better) Translates to: ECGLGKSMVHMTLVT*QSHSQCRTHLFKRW Trigger: CCACCTTTTAAAAAGGTGAGTCCTACATTGTGAATGGCTCTGGCATGTCACTAGTGTCATGTGGACCATACTCTTTCCCAGCCCACACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 90 bp | AAAGTTTCAACCATCAGCCCTGCAAGTGTTAAGATTACAGCTGTGTaGCACCACACCTTCCTCCACCTTCTAGTCATTCCCCACTTCATG | + |
|
Preference number: 1 (lower is better) Translates to: KVSTISPASVKITAV*HHTFLHLLVIPHFM Trigger: CATGAAGTGGGGAATGACTAGAAGGTGGAGGAAGGTGTGGTGGCACACAGCTGTAATCTTAACACTTGCAGGGCTGATGGTTGAAACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 90 bp | AATTCTATTCAAATACCCACTGGAGAGTGGAGAACAAGCACCTGTTaGTTTCTCTGTGACATTGAACCACCACCAGGTGGTAGCCATGGC | + |
|
Preference number: 1 (lower is better) Translates to: NSIQIPTGEWRTSTC*FLCDIEPPPGGSHG Trigger: GCCATGGCTACCACCTGGTGGTGGTTCAATGTCACAGAGAAATCAACAGGTGCTTGTTCTCCACTCTCCAGTGGGTATTTGAATAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CCA 90 bp | TTACAGGTATGGACTATCACTCTTGGTATGCAGGGACTACAGGTATaGACTATCGCTCTTGGTATGCAGGGACTACAGGTATGGACTATC | + |
|
Preference number: 1 (lower is better) Translates to: LQVWTITLGMQGLQV*TIALGMQGLQVWTI Trigger: GATAGTCCATACCTGTAGTCCCTGCATACCAAGAGCGATAGTCCATACCTGTAGTCCCTGCATACCAAGAGTGATAGTCCATACCTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 90 bp | AAAGCAGTGTATGTGCCTCAGCATACGTTTCTTGAGTTAATTCCGTaGACCAGGGTCCTTTATAGAAGACACCATAACAGCCACGCAACA | + |
|
Preference number: 1 (lower is better) Translates to: KAVYVPQHTFLELIP*TRVLYRRHHNSHAT Trigger: TGTTGCGTGGCTGTTATGGTGTCTTCTATAAAGGACCCTGGTGCACGGAATTAACTCAAGAAACGTATGCTGAGGCACATACACTGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 90 bp | AATTTCTATGAGTCTAGTGTCTCTAAAAGAGGATCAAGAGAAACTTaGGAGTCCATGAAGCCTTCAGCATTACCTCGAGTGGTGTGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: NFYESSVSKRGSRET*ESMKPSALPRVVWA Trigger: TGCCCACACCACTCGAGGTAATGCTGAAGGCTTCATGGACTCTCAAGTTTCTCTTGATCCTCTTTTAGAGACACTAGACTCATAGAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 90 bp | ATGGTTCATTTGGACAGCAGGCATGTCAGGCATCACGGTAAAGCTTaGCCTAATCTTTTCATTTTGAAGAGACATGATCTCACTACACAG | + |
|
Preference number: 1 (lower is better) Translates to: MVHLDSRHVRHHGKA*PNLFILKRHDLTTQ Trigger: CTGTGTAGTGAGATCATGTCTCTTCAAAATGAAAAGATTAGGTCAAGCTTTACCGTGATGCCTGACATGCCTGCTGTCCAAATGAACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 90 bp | TCATCCTGTTTTACTAAAGTGGAATGGTGTGTGTATTTGTGTGTGTaGGTATGCATGTGTGTTTGTGAATGCCTGGCAAGTGAGCAGAAT | + |
|
Preference number: 1 (lower is better) Translates to: SSCFTKVEWCVYLCV*VCMCVCECLASEQN Trigger: ATTCTGCTCACTTGCCAGGCATTCACAAACACACATGCATACGCACACACACAAATACACACACCATTCCACTTTAGTAAAACAGGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 90 bp | GATATTTACTCTCAAGCACAGAAGCAAAGCCATGTAAACTTGCAATaGATTTCTATGAGTCTAGTGTCTCTAAAAGAGGATCAAGAGAAA | + |
|
Preference number: 1 (lower is better) Translates to: DIYSQAQKQSHVNLQ*ISMSLVSLKEDQEK Trigger: TTTCTCTTGATCCTCTTTTAGAGACACTAGACTCATAGAAATTCATTGCAAGTTTACATGGCTTTGCTTCTGTGCTTGAGAGTAAATATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR CCA 90 bp | TGTGACATTGAACCACCACCAGGTGGTAGCCATGGCACTCTCCTTTCCCAGGGGTCTCTACTCAGCCCGTaGTCTCTGAGGGGCCCGTCA | + |
|
Preference number: 2 (lower is better) Translates to: CDIEPPPGGSHGTLLSQGSLLSP*SLRGPS Trigger: TGACGGGCCCCTCAGAGACCACGGGCTGAGTAGAGA...CCCCTGGGAAAGGAGAGTGCCATGGCTACCACCTGGTGGTGGTTCAATGTCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CAA 90 bp | ACCCATCCAGTATTCTCCGAGGTGCAGGACACTAGGTTAGGAGTGTaGATCTACACTCCCACCAGAAGCCACTGGAGGGGCTGCTGCTCG | + |
|
Preference number: 2 (lower is better) Translates to: THPVFSEVQDTRLGV*IYTPTRSHWRGCCS Trigger: CGAGCAGCAGCCCCTCCAGTGGCTTCTGGTGGGAGTGTAGATCAACACTCCTAACCTAGTGTCCTGCACCTCGGAGAATACTGGATGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGTCAGGTAACACACAGCTTAGCCATTACACACCAACCAAGTCCTAAGCAGTCTCTACTCAGCCCGTaGTCTCTGAGGGGCCCGTCA | + |
|
Preference number: 2 (lower is better) Translates to: RGQVTHSLAITHQPSPKQSLLSP*SLRGPS Trigger: TGACGGGCCCCTCAGAGACCACGGGCTGAGTAGAGA...CTGCTTAGGACTTGGTTGGTGTGTAATGGCTAAGCTGTGTGTTACCTGACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAGTCCAGTTCCCTCCTCCAACAACAGAAAGCCAATTTTGCTACGCTGATTATGCCTAGCCTGCTCTaGTCAAGGCTGCCAGCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: RQSSSLLQQQKANFATLIMPSLL*SRLPAH Trigger: ATGGGCTGGCAGCCTTGATCAGAGCAGGCTAGGCAT...AATCAGCGTAGCAAAATTGGCTTTCTGTTGTTGGAGGAGGGAACTGGACTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR CAA 90 bp | TCTGAGACAGGGCTTGCTGTAGGCCAGGCTAGCCTCAACTTCTCTTaGTACCTGAGGATGAGTCCTTTCCTTGCAAATCTTGTCACGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SETGLAVGQASLNFS*YLRMSPFLANLVTS Trigger: GCTCGTGACAAGATTTGCAAGGAAAGGACTCATCCTCAGGTACAAAGAGAAGTTGAGGCTAGCCTGGCCTACAGCAAGCCCTGTCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR GCA 90 bp | AGGGGTCAGGTAACACACAGCTTAGCCATTACACACCAACCAAGTCCTAAGCAGGACTCTGCCTCTACGTaGTCTCTGTTCTGTGCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: RGQVTHSLAITHQPSPKQDSAST*SLFCAV Trigger: GACAGCACAGAACAGAGAGCACGTAGAGGCAGAGTC...CTGCTTAGGACTTGGTTGGTGTGTAATGGCTAAGCTGTGTGTTACCTGACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTGCCTCTACGTGCTCTCTGTTCTGTGCTGTCACTTCCACGAGGCTGGCCTCCATCCCTCATCATTTaGACAAATTTGTCAAGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: TLPLRALCSVLSLPRGWPPSLII*TNLSSP Trigger: TGGACTTGACAAATTTGTGCAAATGATGAGGGATGG...AGGCCAGCCTCGTGGAAGTGACAGCACAGAACAGAGAGCACGTAGAGGCAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR GCA 90 bp | GGCCAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGGAGAGTGGAGAACAAACTCCAGTGCCTTGTaGCATCTTCCTGACACACGA | + |
|
Preference number: 2 (lower is better) Translates to: GQEPTENSIQIPTGEWRTNSSAL*HLPDTR Trigger: TCGTGTGTCAGGAAGATGGCACAAGGCACTGGAGTT...TGTTCTCCACTCTCCAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CAA 90 bp | GTAGGCCTGGGTTTACTTTCAACTCAAATCCCTCTGGCCTCAGCTTaGCTAACGCTGGGGTTACAGGTATGGACTATCACTCTTGGTATG | + |
|
Preference number: 2 (lower is better) Translates to: VGLGLLSTQIPLASA*LTLGLQVWTITLGM Trigger: CATACCAAGAGTGATAGTCCATACCTGTAACCCCAGCGTTAGCAAAGCTGAGGCCAGAGGGATTTGAGTTGAAAGTAAACCCAGGCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGAAAGAATGTCAGCAGGGGTCAGGTAACACACAGCTTAGCCATTACACACCTTGTGCCATCTTCCTaGCACACGACTGGCTTATAT | + |
|
Preference number: 2 (lower is better) Translates to: PGKNVSRGQVTHSLAITHLVPSS*HTTGLY Trigger: ATATAAGCCAGTCGTGTGTCAGGAAGATGGCACAAG...GTGTGTAATGGCTAAGCTGTGTGTTACCTGACCCCTGCTGACATTCTTTCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR TCA 90 bp | GATCAAAGTTGGCCAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGGAGACTCCACAGGTCTTGCTaGAGTATGAGCCAAGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: DQSWPGAHREFYSNTHWRLHRSC*SMSQEL Trigger: GAGTTCTTGGCTCATACTTCAGCAAGACCTGTGGAG...TCTCCAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTGGCCAACTTTGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGTTCCCTCCTCCAACAACAGAAAGCCAATTTTGCTACGCTGATTTCAGAACTAATGCTCTCATGTTaGTGTCTCCCTCCAGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SSSLLQQQKANFATLISELMLSC*CLPPGL Trigger: CAGGCCTGGAGGGAGACATCAACATGAGAGCATTAG...TTCTGAAATCAGCGTAGCAAAATTGGCTTTCTGTTGTTGGAGGAGGGAACTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR GCA 90 bp | AGCAAGTACTTGTTGATTACTCATTGTGGACAGACAAACGGCTGTGGTCCGTCCCAGTACCCTGTTATTTaGCTGGGACTACTAACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SKYLLITHCGQTNGCGPSQYPVI*LGLLTV Trigger: GACTGTTAGTAGTCCCAGGCAAATAACAGGGTACTG...GGACGGACCACAGCCGTTTGTCTGTCCACAATGAGTAATCAACAAGTACTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGTTCCCTCCTCCAACAACAGAAAGCCAATTTTGCTACGCTGATTTCAGAAGGAGCTAAAGGCAGGTaGATCTTGGAGTTCAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SSSLLQQQKANFATLISEGAKGR*ILEFKA Trigger: GGCTTTGAACTCCAAGATCCACCTGCCTTTAGCTCC...TTCTGAAATCAGCGTAGCAAAATTGGCTTTCTGTTGTTGGAGGAGGGAACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAGTCCAGTTCCCTCCTCCAACAACAGAAAGCCAATTTTGCTACGCTGATTTCCAAGTCAAAGAACTaGAGAGGATGCTTCTCAATC | + |
|
Preference number: 2 (lower is better) Translates to: RQSSSLLQQQKANFATLISKSKN*RGCFSI Trigger: GATTGAGAAGCATCCTCTTCAGTTCTTTGACTTGGA...AATCAGCGTAGCAAAATTGGCTTTCTGTTGTTGGAGGAGGGAACTGGACTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR CCA 90 bp | AGCCCACAGAGAATTCTATTCAAATACCCACTGGAGAGTGGAGAACAAGCACCTGCCCCAAAGGCATTTTaGTCCAACATGGCAAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: SPQRILFKYPLESGEQAPAPKAF*SNMANL Trigger: AAGATTTGCCATGTTGGACCAAAATGCCTTTGGGGC...AGGTGCTTGTTCTCCACTCTCCAGTGGGTATTTGAATAGAATTCTCTGTGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR CCA 90 bp | GATCAAAGTTGGCCAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGGAGAGTTGATTACTCATTGTaGACAGACAAACGGCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: DQSWPGAHREFYSNTHWRVDYSL*TDKRLW Trigger: CCACAGCCGTTTGTCTGTCCACAATGAGTAATCAAC...TCTCCAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTGGCCAACTTTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGCCTCTGGAACTCTATACCAGTCTCGGACACTGATTCTGTAAGAAATAGGCTGGGGTTACAGGTATaGACTATCACTCTTGGTATG | + |
|
Preference number: 2 (lower is better) Translates to: SGLWNSIPVSDTDSVRNRLGLQV*TITLGM Trigger: CATACCAAGAGTGATAGTCCATACCTGTAACCCCAG...CCTATTTCTTACAGAATCAGTGTCCGAGACTGGTATAGAGTTCCAGAGGCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGTTCCCTCCTCCAACAACAGAAAGCCAATTTTGCTACGCTGATTTCAGAACACTTATTTCAAGTTTaGTCCACAGTATTTTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SSSLLQQQKANFATLISEHLFQV*STVFWE Trigger: CTCCCAAAATACTGTGGATCAAACTTGAAATAAGTG...TTCTGAAATCAGCGTAGCAAAATTGGCTTTCTGTTGTTGGAGGAGGGAACTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR GCA 90 bp | GTTCTCTGTTTATTGTGTGCTTTTACTGTCCTAATGATGGATGCTAAGGGAGAACAGTACCCTGTTATTTaGCTGGGACTACTAACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: VLCLLCAFTVLMMDAKGEQYPVI*LGLLTV Trigger: GACTGTTAGTAGTCCCAGGCAAATAACAGGGTACTG...TTCTCCCTTAGCATCCATCATTAGGACAGTAAAAGCACACAATAAACAGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR GCA 72 bp | CCCACCAGAAGCCACTGGAGGGGCTGCTGCTCGCCTTaGCCAGTCTCCTTCTCAGACTCAGGGAAGAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PTRSHWRGCCSP*PVSFSDSGKSH Trigger: ATGACTCTTCCCTGAGTCTGAGAAGGAGACTGGGCAAGGCGAGCAGCAGCCCCTCCAGTGGCTTCTGGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 72 bp | ATCTACACTCCCACCAGAAGCCACTGGAGGGGCTGCTaGTCGCCTTGCCCAGTCTCCTTCTCAGACTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IYTPTRSHWRGC*SPCPVSFSDSG Trigger: CCCTGAGTCTGAGAAGGAGACTGGGCAAGGCGAGCAGCAGCCCCTCCAGTGGCTTCTGGTGGGAGTGTAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 72 bp | TTGATCTACACTCCCACCAGAAGCCACTGGAGGGGCTaGTGCTCGCCTTGCCCAGTCTCCTTCTCAGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: LIYTPTRSHWRG*CSPCPVSFSDS Trigger: TGAGTCTGAGAAGGAGACTGGGCAAGGCGAGCAGCAGCCCCTCCAGTGGCTTCTGGTGGGAGTGTAGATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR CCA 72 bp | TTAGGAGTGTTGATCTACACTCCCACCAGAAGCCACTaGAGGGGCTGCTGCTCGCCTTGCCCAGTCTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LGVLIYTPTRSH*RGCCSPCPVSF Trigger: GAAGGAGACTGGGCAAGGCGAGCAGCAGCCCCTCCAGTGGCTTCTGGTGGGAGTGTAGATCAACACTCCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 72 bp | GCTAATCTGCCCCTGGGGGATAGATGGTGGCAGGAGTaGGTGTGGGCTGGGAAAGAGTATGGTCCACATGAC | + |
|
Preference number: 3 (lower is better) Translates to: ANLPLGDRWWQE*VWAGKEYGPHD Trigger: GTCATGTGGACCATACTCTTTCCCAGCCCACACTCACTCCTGCCACCATCTATCCCCCAGGGGCAGATTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR CCA 72 bp | ACATTCTTAAGGCTCCAGACAGTGCTAATCTGCCCCTaGGGGATAGATGGTGGCAGGAGTGAGTGTGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TFLRLQTVLICP*GIDGGRSECGL Trigger: CAGCCCACACTCACTCCTGCCACCATCTATCCCCCAGGGGCAGATTAGCACTGTCTGGAGCCTTAAGAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 72 bp | CTAAGCAGCAGTCCACAGGCCAACTCCAGTGCCTTGTaGCATCTTCCTGACACACGACTGGCTTATATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LSSSPQANSSAL*HLPDTRLAYIL Trigger: GAGGATATAAGCCAGTCGTGTGTCAGGAAGATGGCACAAGGCACTGGAGTTGGCCTGTGGACTGCTGCTTAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR GCA 72 bp | GCCAAGACAGTCTGGAGGCCAAGAAAAGCATGGGTCTaGATCTTCACACTAGGGTTCCAAGCTGTTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: AKTVWRPRKAWV*IFTLGFQAVLG Trigger: TCCCAGAACAGCTTGGAACCCTAGTGTGAAGATGCAGACCCATGCTTTTCTTGGCCTCCAGACTGTCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR CCA 72 bp | CGTGCTCTCTGTTCTGTGCTGTCACTTCCACGAGGCTaGCCTGCAAACTCCAAGTCACAAACAGCTAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RALCSVLSLPRG*PANSKSQTAKV Trigger: AACCTTAGCTGTTTGTGACTTGGAGTTTGCAGGCCAGCCTCGTGGAAGTGACAGCACAGAACAGAGAGCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CCA 72 bp | GTGAATGCCTGGCAAGTGAGCAGAATCCTGGTTCTATaGAGATGCCCTCGTTGCTCACGTTCGAACAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: VNAWQVSRILVL*RCPRCSRSNST Trigger: GGTACTGTTCGAACGTGAGCAACGAGGGCATCTCCATAGAACCAGGATTCTGCTCACTTGCCAGGCATTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR CCA 72 bp | CTACTCAGCCCTGGCTACTCCGTCACAGCAGGACACTaGACTGTGAGACAGTCAAAATTTAGTTGCCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LLSPGYSVTAGH*TVRQSKFSCQV Trigger: GACCTGGCAACTAAATTTTGACTGTCTCACAGTCCAGTGTCCTGCTGTGACGGAGTAGCCAGGGCTGAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 72 bp | GGAACTGCAAACAAAGCAAGGAATTTTGGCAACTGCTaGCCATGCCTAGCCTGCTCTGATCAAGGCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GTANKARNFGNC*PCLACSDQGCQ Trigger: CTGGCAGCCTTGATCAGAGCAGGCTAGGCATGGTCAGCAGTTGCCAAAATTCCTTGCTTTGTTTGCAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR TCA 72 bp | AAGGCTGGCCTGTTTCTAAGTAACCCAGGCTGGCTTTaGACTCAGCAATACTGTCTCAGCCTCCTGAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KAGLFLSNPGWL*TQQYCLSLLSA Trigger: AGCACTCAGGAGGCTGAGACAGTATTGCTGAGTTCAAAGCCAGCCTGGGTTACTTAGAAACAGGCCAGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 72 bp | CTCAATACATTCTTAAGGCTCCAGACAGTGCTAATCTaGCCCTGGGGGATAGATGGTGGCAGGAGTGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LNTFLRLQTVLI*PWGIDGGRSEC Trigger: ACACTCACTCCTGCCACCATCTATCCCCCAGGGGCAGATTAGCACTGTCTGGAGCCTTAAGAATGTATTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR CCA 72 bp | GGGAGAAAGCAGCAAGTACTTGTTGATTACTCATTGTaGACAGACAAACGGCTGTGGTCCGTCCTGTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GRKQQVLVDYSL*TDKRLWSVLSL Trigger: GAGGGACAGGACGGACCACAGCCGTTTGTCTGTCCACAATGAGTAATCAACAAGTACTTGCTGCTTTCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGGAGAGTGGAGAACAAGCGCAGAACGCAAGGCTTaGAGTCCCAGCACAACACAT | + |
|
Preference number: 3 (lower is better) Translates to: QEPTENSIQIPTGEWRTSAERKA*SPSTTH Trigger: ATGTGTTGTGCTGGGACTCAAAGCCTTGCGTTCTGC...GCTTGTTCTCCACTCTCCAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGATCTGCTCTCTCACCCTCGTCCCTCTGTCCATTAACTGGAGCTAAGGCAGTCACCCTTGTCATCTaGACTAACACAGCTAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QRSALSPSSLCPLTGAKAVTLVI*TNTAKA Trigger: AGCCTTAGCTGTGTTAGTCAAGATGACAAGGGTGAC...TGCCTTAGCTCCAGTTAATGGACAGAGGGACGAGGGTGAGAGAGCAGATCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 72 bp | ATGTCTTTCCCTGAGCTTCTCCCTTCTTTCTTTCCCTaGGCTCCTTCGTCCAAGAGCTCAGTTTCTCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: MSFPELLPSFFP*APSSKSSVSHS Trigger: GGAGTGAGAAACTGAGCTCTTGGACGAAGGAGCTCAGGGAAAGAAAGAAGGGAGAAGCTCAGGGAAAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 72 bp | CTAAAGGCAGGTGGATCTTGGAGTTCAAAGCCAGCCTaGTCTACTATAGAGCAAATTCCAGGACAGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LKAGGSWSSKPA*STIEQIPGQPG Trigger: CCCTGGCTGTCCTGGAATTTGCTCTATAGTAGATCAGGCTGGCTTTGAACTCCAAGATCCACCTGCCTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 72 bp | CGCTGGGGTTACAGGTATGGACTATCACTCTTGGTATaGAGGGACTACAGGTATGGACTATCGCTCTTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: RWGYRYGLSLLV*RDYRYGLSLLV Trigger: TACCAAGAGCGATAGTCCATACCTGTAGTCCCTGCATACCAAGAGTGATAGTCCATACCTGTAACCCCAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR CCA 72 bp | TCTCCTTTCCCAGGGGACGGAACTGGCCTTAAGATATaGGAACACAGGTCTATACTTCTCACCACAACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SPFPGDGTGLKI*EHRSILLTTTS Trigger: GCTTGTTGTGGTGAGAAGTATAGACCTGTGTTCCCATATCTTAAGGCCAGTTCCGTCCCCTGGGAAAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CCA 72 bp | CTAATGCAGGGACTGACTGGTATATACCATCACTCCTaGAGGATGCACCCACAGACTGACCTTACATGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LMQGLTGIYHHS*RMHPQTDLTCC Trigger: ACAGCATGTAAGGTCAGTCTGTGGGTGCATCCTCCAGGAGTGATGGTATATACCAGTCAGTCCCTGCATTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR CCA 72 bp | GTATGGACTATCACCGTTGCTAATGCAGGGACTGACTaGTATATACCATCACTCCTGGAGGATGCACCCACA | + |
|
Preference number: 3 (lower is better) Translates to: VWTITVANAGTD*YIPSLLEDAPT Trigger: TGTGGGTGCATCCTCCAGGAGTGATGGTATATACCAGTCAGTCCCTGCATTAGCAACGGTGATAGTCCATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 72 bp | AATCCCAGCACTCAGGAGGCTGAGGTAGAATTGCTTTaGTTTCCAGGCCAGTCTGTGTTAAACAGTGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: NPSTQEAEVELL*FPGQSVLNSET Trigger: GGTCTCACTGTTTAACACAGACTGGCCTGGAAATCAAAGCAATTCTACCTCAGCCTCCTGAGTGCTGGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 72 bp | CATCAGAATCCCTTTAGAGCCACGTTGCCCAATATCTaGAGTCACTCCCCAGCTCTGACAGGACTAATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HQNPFRATLPNI*SHSPALTGLIF Trigger: AAAGATTAGTCCTGTCAGAGCTGGGGAGTGACTGCAGATATTGGGCAACGTGGCTCTAAAGGGATTCTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR GCA 72 bp | GTCCAGTTCCCTCCTCCAACAACAGAAAGCCAATTTTaGTACGCTGATTTCAGAATCCCTCATCCTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VQFPPPTTESQF*YADFRIPHPAA Trigger: AGCAGCAGGATGAGGGATTCTGAAATCAGCGTAGCAAAATTGGCTTTCTGTTGTTGGAGGAGGGAACTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGATCTGCTCTCTCACCCTCGTCCCTCTGTCCATTAACTGGAGCTAAGGCAACCATCCCTCATCATTaGCACAAATTTGTCAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QRSALSPSSLCPLTGAKATIPHH*HKFVKS Trigger: GGACTTGACAAATTTGTGCAAATGATGAGGGATGGT...TGCCTTAGCTCCAGTTAATGGACAGAGGGACGAGGGTGAGAGAGCAGATCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGTCCAGTTCCCTCCTCCAACAACAGAAAGCCAATTTTGCTACGCTGATTACTTCTCCACAGGTCTaGCTGAAGTATGAGCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RQSSSLLQQQKANFATLITSPQV*LKYEPR Trigger: TCTTGGCTCATACTTCAGCAAGACCTGTGGAGAAGT...AATCAGCGTAGCAAAATTGGCTTTCTGTTGTTGGAGGAGGGAACTGGACTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGAAAGAATGTCAGCAGGGGTCAGGTAACACACAGCTTAGCCATTACACACACCATCCCTCATCATTaGCACAAATTTGTCAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PGKNVSRGQVTHSLAITHTIPHH*HKFVKS Trigger: GGACTTGACAAATTTGTGCAAATGATGAGGGATGGT...GTGTGTAATGGCTAAGCTGTGTGTTACCTGACCCCTGCTGACATTCTTTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR CAA 90 bp | GATCAAAGTTGGCCAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGGAGAGATTTCTCTGTGACATaGAACCACCACCAGGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: DQSWPGAHREFYSNTHWRDFSVT*NHHQVV Trigger: TACCACCTGGTGGTGGTTCAATGTCACAGAGAAATC...TCTCCAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTGGCCAACTTTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR TCA 72 bp | AGAGAGAAGACTCACCCCATGTCCAAGTCAAAGAACTaGAGAGGATGCTTCTCAATCCCTCCACATTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: REKTHPMSKSKN*RGCFSIPPHCC Trigger: ACAGCAATGTGGAGGGATTGAGAAGCATCCTCTTCAGTTCTTTGACTTGGACATGGGGTGAGTCTTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR GCA 72 bp | CAACTTCTCTTTGTACCTGAGGATGAGTCCTTTCCTTaGAAATCTTGTCACGAGCCTGCTTCCTCACACACA | + |
|
Preference number: 3 (lower is better) Translates to: QLLFVPEDESFP*KSCHEPASSHT Trigger: TGTGTGTGAGGAAGCAGGCTCGTGACAAGATTTGCAAGGAAAGGACTCATCCTCAGGTACAAAGAGAAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR CAA 90 bp | AATAGATCAAAGTTGGCCAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGGGCCCCAAAGGCATTTaGGTCCAACATGGCAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: NRSKLARSPQRILFKYPLGPKGI*VQHGKS Trigger: AGATTTGCCATGTTGGACCAAAATGCCTTTGGGGCC...CAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTGGCCAACTTTGATCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR TCA 72 bp | AGATGCCCTCGTTGCTCACGTTCGAACAGTACCACCTaGCATAGACTAATACTAGCTGAAGGTGGTATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: RCPRCSRSNSTT*HRLILAEGGIN Trigger: GTTAATACCACCTTCAGCTAGTATTAGTCTATGTCAGGTGGTACTGTTCGAACGTGAGCAACGAGGGCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 72 bp | AGAAATAGGAAAGATCTATCTCCAGGTGCTATGCCCTaGCCCAGCCTCTTATTGCCTAGGTTAGCTTTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RNRKDLSPGAMP*PSLLLPRLALN Trigger: GTTCAAAGCTAACCTAGGCAATAAGAGGCTGGGTCAGGGCATAGCACCTGGAGATAGATCTTTCCTATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 72 bp | AAAGTGGAATGGTGTGTGTATTTGTGTGTGTGCGTATaGATGTGTGTTTGTGAATGCCTGGCAAGTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KVEWCVYLCVCV*MCVCECLASEQ Trigger: CTGCTCACTTGCCAGGCATTCACAAACACACATGCATACGCACACACACAAATACACACACCATTCCACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR CAA 90 bp | AATAGATCAAAGTTGGCCAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGACTTCTCCACAGGTCTaGCTGAAGTATGAGCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: NRSKLARSPQRILFKYPLTSPQV*LKYEPR Trigger: TCTTGGCTCATACTTCAGCAAGACCTGTGGAGAAGT...CAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTGGCCAACTTTGATCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR TCA 72 bp | GAGTCTAGTGTCTCTAAAAGAGGATCAAGAGAAACTTaGGAGTCCATGAAGCCTTCAGCATTACCTCGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ESSVSKRGSRET*ESMKPSALPRV Trigger: CACTCGAGGTAATGCTGAAGGCTTCATGGACTCTCAAGTTTCTCTTGATCCTCTTTTAGAGACACTAGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR CCA 72 bp | CAACAGCAGTCTTGTAGGGAAAGCTATTTCTTACGTTaGCAAAAGCTAGCCGCTCAAAAAGACAAAGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: QQQSCRESYFLR*QKLAAQKDKDL Trigger: CAGATCTTTGTCTTTTTGAGCGGCTAGCTTTTGCCAACGTAAGAAATAGCTTTCCCTACAAGACTGCTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTCTGTTTATTGTGTGCTTTTACTGTCCTAATGATGGATGCTAAGGGAGAAACAAAGCAAGGAATTTaGGCAACTGCTGACCATGCC | + |
|
Preference number: 3 (lower is better) Translates to: VLCLLCAFTVLMMDAKGETKQGI*ATADHA Trigger: GGCATGGTCAGCAGTTGCCAAAATTCCTTGCTTTGT...TTCTCCCTTAGCATCCATCATTAGGACAGTAAAAGCACACAATAAACAGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR CAA 90 bp | AATAGATCAAAGTTGGCCAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGAGCAGCAAGTACTTGTaGATTACTCATTGTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: NRSKLARSPQRILFKYPLSSKYL*ITHCGQ Trigger: CTGTCCACAATGAGTAATCAACAAGTACTTGCTGCT...CAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTGGCCAACTTTGATCTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR TCA 72 bp | AACCTTAAACTAATGTATATAACTTCACAGACACCATaGAACCCATCCAGTATTCTCCGAGGTGCAGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: NLKLMYITSQTP*NPSSILRGAGH Trigger: GTGTCCTGCACCTCGGAGAATACTGGATGGGTTTCATGGTGTCTGTGAAGTTATATACATTAGTTTAAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 72 bp | CCCAGCCTCTTATTGCCTAGGTTAGCTTTGAACTCCTaGACTTCCTGCTTTTATATCACAAATGCCAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: PSLLLPRLALNS*TSCFYITNAKI Trigger: AATCTTGGCATTTGTGATATAAAAGCAGGAAGTTCAGGAGTTCAAAGCTAACCTAGGCAATAAGAGGCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR TCA 72 bp | GGCATCACGGTAAAGCTTGACCTAATCTTTTCATTTTaGAGAGACATGATCTCACTACACAGTCTAGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: GITVKLDLIFSF*RDMISLHSLDL Trigger: GAGGTCTAGACTGTGTAGTGAGATCATGTCTCTTCAAAATGAAAAGATTAGGTCAAGCTTTACCGTGATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR GCA 72 bp | TTTACTAAAGTGGAATGGTGTGTGTATTTGTGTGTGTaGGTATGCATGTGTGTTTGTGAATGCCTGGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FTKVEWCVYLCV*VCMCVCECLAS Trigger: ACTTGCCAGGCATTCACAAACACACATGCATACGCACACACACAAATACACACACCATTCCACTTTAGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGTGTGAGAAGTTCTCTGTTTATTGTGTGCTTTTACTGTCCTAATGATGGAAGCAGCAAGTACTTGTaGATTACTCATTGTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: ASVRSSLFIVCFYCPNDGSSKYL*ITHCGQ Trigger: CTGTCCACAATGAGTAATCAACAAGTACTTGCTGCT...TCCATCATTAGGACAGTAAAAGCACACAATAAACAGAGAACTTCTCACACTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CCA 72 bp | TTCTTTCCTTTTAAGACTCCTAAAATAGATCAAAGTTaGCCAGGAGCCCACAGAGAATTCTATTCAAATACC | + |
|
Preference number: 3 (lower is better) Translates to: FFPFKTPKIDQS*PGAHREFYSNT Trigger: GGTATTTGAATAGAATTCTCTGTGGGCTCCTGGCCAACTTTGATCTATTTTAGGAGTCTTAAAAGGAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTAAGTTGAAGAATTGGAATGGGAAAAACATACTGAGCAACAGCAGTCTTGAAGTTCTCTGTTTATaGTGTGCTTTTACTGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: VLKLKNWNGKNILSNSSLEVLCL*CAFTVL Trigger: TAGGACAGTAAAAGCACACAATAAACAGAGAACTTC...AAGACTGCTGTTGCTCAGTATGTTTTTCCCATTCCAATTCTTCAACTTAAGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR GCA 90 bp | ATGAAAGCACTAGACTCCCAGGCAGGGAGCGCTGAGGGTGGCGCCAGCCCATGGGCAGCATCCTCTGGATaGGGATGCTCTGGTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MKALDSQAGSAEGGASPWAASSG*GCSGLG Trigger: ACCAAGACCAGAGCATCCGCATCCAGAGGATGCTGC...CCATGGGCTGGCGCCACCCTCAGCGCTCCCTGCCTGGGAGTCTAGTGCTTTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CAA 72 bp | TCCCACCAGAAGCCACTGGAGGGGCTGCTGCTCGCCTaGCCCAGTCTCCTTCTCAGACTCAGGGAAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHQKPLEGLLLA*PSLLLRLREES Trigger: TGACTCTTCCCTGAGTCTGAGAAGGAGACTGGGCAAGGCGAGCAGCAGCCCCTCCAGTGGCTTCTGGTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR CCA 90 bp | GCCATCTTCCTGACACACGACTGGCTTATATCCTCCTCCTCCCTGAGGACTCTGTTCCGAGCTTGGGCTTaGGCTCGGGCTCGGGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: AIFLTHDWLISSSSLRTLFRAWA*ARARAR Trigger: TCGAGCCCGAGCCCGAGCCCAAGCCCAAGCTCGGAA...CAGAGTCCTCAGGGAGGAGGAGGATATAAGCCAGTCGTGTGTCAGGAAGATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065784.6 |
||
| CDS-3UTR TCA 90 bp | GCCATCTTCCTGACACACGACTGGCTTATATCCTCCTCCTCCCTGAGGACTCTGTGGCTTGGGCGATGGTaGTGGCCCCATACAGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: AIFLTHDWLISSSSLRTLWLGRW*WPHTDC Trigger: GCAATCTGTATGGGGCCATCACCATCGCCCAAGCCA...CAGAGTCCTCAGGGAGGAGGAGGATATAAGCCAGTCGTGTGTCAGGAAGATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR GCA 90 bp | GTGCTCTCTGTTCTGTGCTGTCACTTCCACGAGGCTGGCCTGCAAACTCCAAGTGCAGCATCCTCTGGATaGGGATGCTCTGGTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLSVLCCHFHEAGLQTPSAASSG*GCSGLG Trigger: ACCAAGACCAGAGCATCCGCATCCAGAGGATGCTGC...ACTTGGAGTTTGCAGGCCAGCCTCGTGGAAGTGACAGCACAGAACAGAGAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CAA 72 bp | GTATTCTCCGAGGTGCAGGACACTAGGTTAGGAGTGTaGATCTACACTCCCACCAGAAGCCACTGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFSEVQDTRLGV*IYTPTRSHWRG Trigger: GCCCCTCCAGTGGCTTCTGGTGGGAGTGTAGATCAACACTCCTAACCTAGTGTCCTGCACCTCGGAGAATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCCTCAGACTACTCAGCCCTGGCTACTCCGTCACAGCAGGACACTGGACTTTGCAGGCTCTACTTaGCTGAGCACAGCCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TCPQTTQPWLLRHSRTLDFAGST*LSTAKT Trigger: TGTTTTGGCTGTGCTCAGCCAAGTAGAGCCTGCAAA...GTCCAGTGTCCTGCTGTGACGGAGTAGCCAGGGCTGAGTAGTCTGAGGACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR CCA 90 bp | CAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGGAGAGTGGAGAACAAGCAGTGGATTCCGAGCTTaGGCTTGGGCTCGGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QEPTENSIQIPTGEWRTSSGFRA*AWARAR Trigger: CCGAGCCCGAGCCCAAGCCCAAGCTCGGAATCCACT...GCTTGTTCTCCACTCTCCAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065784.6 |
||
| 3UTR CAA 72 bp | GTCCTAAGCAGCAGTCCACAGGCCAACTCCAGTGCCTaGTGCCATCTTCCTGACACACGACTGGCTTATATC | + |
|
Preference number: 4 (lower is better) Translates to: VLSSSPQANSSA*CHLPDTRLAYI Trigger: GATATAAGCCAGTCGTGTGTCAGGAAGATGGCACAAGGCACTGGAGTTGGCCTGTGGACTGCTGCTTAGGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CCA 90 bp | TGTGACATTGAACCACCACCAGGTGGTAGCCATGGCACTCTCCTTTCCCAGGGGTTTGCAGGCTCTACTTaGCTGAGCACAGCCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CDIEPPPGGSHGTLLSQGFAGST*LSTAKT Trigger: TGTTTTGGCTGTGCTCAGCCAAGTAGAGCCTGCAAA...CCCCTGGGAAAGGAGAGTGCCATGGCTACCACCTGGTGGTGGTTCAATGTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR TCA 90 bp | CAAAGATCTGCTCTCTCACCCTCGTCCCTCTGTCCATTAACTGGAGCTAAGGCACAGGCTCTACTTGGCTaGGCACAGCCAAAACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRSALSPSSLCPLTGAKAQALLG*AQPKQR Trigger: CCTTTGTTTTGGCTGTGCTCAGCCAAGTAGAGCCTG...TGCCTTAGCTCCAGTTAATGGACAGAGGGACGAGGGTGAGAGAGCAGATCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR GCA 90 bp | TGTGACATTGAACCACCACCAGGTGGTAGCCATGGCACTCTCCTTTCCCAGGGGCCCTCTCCAATTTGTTaGCTCGAACAGCATAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CDIEPPPGGSHGTLLSQGPSPIC*LEQHKL Trigger: TAGCTTATGCTGTTCGAGGCAACAAATTGGAGAGGG...CCCCTGGGAAAGGAGAGTGCCATGGCTACCACCTGGTGGTGGTTCAATGTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCACTTCCACGAGGCTGGCCTGCAAACTCCAAGTCACAAACAGCTAAGGAGCAAGCTCATAGGTTaGAGAGAGGCAGAGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: CCHFHEAGLQTPSHKQLRSKLIG*REAETL Trigger: CAGTGTCTCTGCCTCTCTCCAACCTATGAGCTTGCT...CCTTAGCTGTTTGTGACTTGGAGTTTGCAGGCCAGCCTCGTGGAAGTGACAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CCA 90 bp | CCTGGAAAGAATGTCAGCAGGGGTCAGGTAACACACAGCTTAGCCATTACACACGAGAGGCAGAGACACTaGGCAAACTTGTTTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGKNVSRGQVTHSLAITHERQRH*ANLFAG Trigger: GCCTGCAAACAAGTTTGCCCAGTGTCTCTGCCTCTC...GTGTGTAATGGCTAAGCTGTGTGTTACCTGACCCCTGCTGACATTCTTTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CAA 72 bp | GTGAACACAGACCATCAGAATCCCTTTAGAGCCACGTaGCCCAATATCTGCAGTCACTCCCCAGCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VNTDHQNPFRAT*PNICSHSPALT Trigger: TGTCAGAGCTGGGGAGTGACTGCAGATATTGGGCAACGTGGCTCTAAAGGGATTCTGATGGTCTGTGTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CAA 72 bp | AGTGGAGAACAAGCACCTGTTGATTTCTCTGTGACATaGAACCACCACCAGGTGGTAGCCATGGCACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGEQAPVDFSVT*NHHQVVAMALS Trigger: GGAGAGTGCCATGGCTACCACCTGGTGGTGGTTCAATGTCACAGAGAAATCAACAGGTGCTTGTTCTCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CCA 90 bp | CAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGGAGAGTGGAGAACAAGCTCCCTGGAGAAGCTGTaGTTTCAGGCGAAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QEPTENSIQIPTGEWRTSSLEKL*FQAKLF Trigger: GAAGAGCTTCGCCTGAAACCACAGCTTCTCCAGGGA...GCTTGTTCTCCACTCTCCAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CAA 72 bp | GGGCTTGCTGTAGGCCAGGCTAGCCTCAACTTCTCTTaGTACCTGAGGATGAGTCCTTTCCTTGCAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLAVGQASLNFS*YLRMSPFLANL Trigger: AAGATTTGCAAGGAAAGGACTCATCCTCAGGTACAAAGAGAAGTTGAGGCTAGCCTGGCCTACAGCAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR TCA 90 bp | GATCAAAGTTGGCCAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGGAGACAGGCTCTACTTGGCTaGGCACAGCCAAAACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DQSWPGAHREFYSNTHWRQALLG*AQPKQR Trigger: CCTTTGTTTTGGCTGTGCTCAGCCAAGTAGAGCCTG...TCTCCAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTGGCCAACTTTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR GCA 90 bp | GCCATCTTCCTGACACACGACTGGCTTATATCCTCCTCCTCCCTGAGGACTCTGTTCTCCTCCTTAAGATaGAAGTTGCTCAAAGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: AIFLTHDWLISSSSLRTLFSSLR*KLLKDS Trigger: TGAGTCTTTGAGCAACTTGCATCTTAAGGAGGAGAA...CAGAGTCCTCAGGGAGGAGGAGGATATAAGCCAGTCGTGTGTCAGGAAGATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR GCA 90 bp | CAAAGATCTGCTCTCTCACCCTCGTCCCTCTGTCCATTAACTGGAGCTAAGGCACCCTCTCCAATTTGTTaGCTCGAACAGCATAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QRSALSPSSLCPLTGAKAPSPIC*LEQHKL Trigger: TAGCTTATGCTGTTCGAGGCAACAAATTGGAGAGGG...TGCCTTAGCTCCAGTTAATGGACAGAGGGACGAGGGTGAGAGAGCAGATCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR TCA 90 bp | TCTGGCCTCTGGAACTCTATACCAGTCTCGGACACTGATTCTGTAAGAAATAGGTGCTCACTCACCTTCTaGCCCCTCTCCAATTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGLWNSIPVSDTDSVRNRCSLTF*PLSNLL Trigger: CAACAAATTGGAGAGGGGTCAGAAGGTGAGTGAGCA...CCTATTTCTTACAGAATCAGTGTCCGAGACTGGTATAGAGTTCCAGAGGCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR CCA 90 bp | TCCAGTTCCCTCCTCCAACAACAGAAAGCCAATTTTGCTACGCTGATTTCAGAATCCCTGGAGAAGCTGTaGTTTCAGGCGAAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLLQQQKANFATLISESLEKL*FQAKLF Trigger: GAAGAGCTTCGCCTGAAACCACAGCTTCTCCAGGGA...TTCTGAAATCAGCGTAGCAAAATTGGCTTTCTGTTGTTGGAGGAGGGAACTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR GCA 90 bp | CCTGGAAAGAATGTCAGCAGGGGTCAGGTAACACACAGCTTAGCCATTACACACTTCTCCTCCTTAAGATaGAAGTTGCTCAAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGKNVSRGQVTHSLAITHFSSLR*KLLKPV Trigger: GACTGGTTTGAGCAACTTGCATCTTAAGGAGGAGAA...GTGTGTAATGGCTAAGCTGTGTGTTACCTGACCCCTGCTGACATTCTTTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065784.6 |
||
| 3UTR CAA 72 bp | AAAGAACTGAAGAGGATGCTTCTCAATCCCTCCACATaGCTGTCACTCTGTAGTATCTATGGCCTAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KELKRMLLNPST*LSLCSIYGLAS Trigger: ACTGGCTAGGCCATAGATACTACAGAGTGACAGCAATGTGGAGGGATTGAGAAGCATCCTCTTCAGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CAA 72 bp | ATGATGGATGCTAAGGGAGAAAGCAGCAAGTACTTGTaGATTACTCATTGTGGACAGACAAACGGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MMDAKGESSKYL*ITHCGQTNGCG Trigger: ACCACAGCCGTTTGTCTGTCCACAATGAGTAATCAACAAGTACTTGCTGCTTTCTCCCTTAGCATCCATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR TCA 90 bp | GTTCTCTGTTTATTGTGTGCTTTTACTGTCCTAATGATGGATGCTAAGGGAGAATGCTCACTCACCTTCTaGCCCCTCTCCAATTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLCLLCAFTVLMMDAKGECSLTF*PLSNLL Trigger: CAACAAATTGGAGAGGGGTCAGAAGGTGAGTGAGCA...TTCTCCCTTAGCATCCATCATTAGGACAGTAAAAGCACACAATAAACAGAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR GCA 90 bp | CAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGGAGAGTGGAGAACAAGCATCTTCTTATTAAAATaGTCCTGGATCCTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QEPTENSIQIPTGEWRTSIFLLK*SWILLR Trigger: CCTCAACAGGATCCAGGAGCATTTTAATAAGAAGAT...GCTTGTTCTCCACTCTCCAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| 3UTR CAA 72 bp | TACTCACTTAGAACCCAAACCTCAGTACCCTGTTATTaGCCTGGGACTACTAACAGTCCAAGTGATGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: YSLRTQTSVPCY*PGTTNSPSDVT Trigger: TGTAACATCACTTGGACTGTTAGTAGTCCCAGGCAAATAACAGGGTACTGAGGTTTGGGTTCTAAGTGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR GCA 90 bp | AGCAAGTACTTGTTGATTACTCATTGTGGACAGACAAACGGCTGTGGTCCGTCCAAGCATCAAAGGCAATaGATTTTCCTGTATTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKYLLITHCGQTNGCGPSKHQRQ*IFLYFG Trigger: TCCAAAATACAGGAAAATGCATTGCCTTTGATGCTT...GGACGGACCACAGCCGTTTGTCTGTCCACAATGAGTAATCAACAAGTACTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR GCA 90 bp | TTCGTCCAAGAGCTCAGTTTCTCACTCCATAGATACATAACAGTCAAATCCCTGAAGCATCAAAGGCAATaGATTTTCCTGTATTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FVQELSFSLHRYITVKSLKHQRQ*IFLYFG Trigger: TCCAAAATACAGGAAAATGCATTGCCTTTGATGCTT...CAGGGATTTGACTGTTATGTATCTATGGAGTGAGAAACTGAGCTCTTGGACGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR GCA 90 bp | TTTGAACTCCTGAACTTCCTGCTTTTATATCACAAATGCCAAGATTATAGGCATATCTTCTTATTAAAATaGTCCTGGATCCTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FELLNFLLLYHKCQDYRHIFLLK*SWILLR Trigger: CCTCAACAGGATCCAGGAGCATTTTAATAAGAAGAT...ATGCCTATAATCTTGGCATTTGTGATATAAAAGCAGGAAGTTCAGGAGTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| 3UTR CAA 72 bp | GTAAATTTCTGTGTATTCATGCCTAATCTTCCAAAGTaGTGTAAACACATTTCTACCATCCCTCATCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VNFCVFMPNLPK*CKHISTIPHHL Trigger: CAAATGATGAGGGATGGTAGAAATGTGTTTACACAACTTTGGAAGATTAGGCATGAATACACAGAAATTTAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS CCA 90 bp | CTCAAACCAGTCAGGGGCAGGGAAAGTGGATTCCGAGCTTGGGCTTaGGCTCGGGCTCGGGCTCGACCTCGACCCGGCCAGCAGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LKPVRGRESGFRAWA*ARARARPRPGQQLR Trigger: CCGGAGCTGCTGGCCGGGTCGAGGTCGAGCCCGAGCCCGAGCCCAAGCCCAAGCTCGGAATCCACTTTCCCTGCCCCTGACTGGTTTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065784.6 |
||
| CDS CCA 90 bp | AAGTTGCTCAAACCAGTCAGGGGCAGGGAAAGTGGATTCCGAGCTTaGGCTTGGGCTCGGGCTCGGGCTCGACCTCGACCCGGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KLLKPVRGRESGFRA*AWARARARPRPGQQ Trigger: CTGCTGGCCGGGTCGAGGTCGAGCCCGAGCCCGAGCCCAAGCCCAAGCTCGGAATCCACTTTCCCTGCCCCTGACTGGTTTGAGCAACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065784.6 |
||
| CDS CCA 90 bp | CTCCTTAAGATGCAAGTTGCTCAAACCAGTCAGGGGCAGGGAAAGTaGATTCCGAGCTTGGGCTTGGGCTCGGGCTCGGGCTCGACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLKMQVAQTSQGQGK*IPSLGLGSGSGSTS Trigger: CGAGGTCGAGCCCGAGCCCGAGCCCAAGCCCAAGCTCGGAATCCACTTTCCCTGCCCCTGACTGGTTTGAGCAACTTGCATCTTAAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | TGTGACATTGAACCACCACCAGGTGGTAGCCATGGCACTCTCCTTTCCCAGGGGGAGCAAGCTCATAGGTaGGAGAGAGGCAGAGACACT | + |
|
Preference number: 5 (lower is better) Translates to: CDIEPPPGGSHGTLLSQGEQAHR*ERGRDT Trigger: AGTGTCTCTGCCTCTCTCCAACCTATGAGCTTGCTC...CCCCTGGGAAAGGAGAGTGCCATGGCTACCACCTGGTGGTGGTTCAATGTCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | GCCATCTTCCTGACACACGACTGGCTTATATCCTCCTCCTCCCTGAGGACTCTGTCTGGGTTCCCGTCCTaGTCCACAGGGAGGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AIFLTHDWLISSSSLRTLSGFPS*STGRSK Trigger: TTTTGACCTCCCTGTGGACAAGGACGGGAACCCAGA...CAGAGTCCTCAGGGAGGAGGAGGATATAAGCCAGTCGTGTGTCAGGAAGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | AGGGGTCAGGTAACACACAGCTTAGCCATTACACACCAACCAAGTCCTAAGCAGAAGTGGATTCCGAGCTaGGGCTTGGGCTCGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RGQVTHSLAITHQPSPKQKWIPS*GLGSGS Trigger: CGAGCCCGAGCCCAAGCCCAAGCTCGGAATCCACTT...CTGCTTAGGACTTGGTTGGTGTGTAATGGCTAAGCTGTGTGTTACCTGACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | GTGCTCTCTGTTCTGTGCTGTCACTTCCACGAGGCTGGCCTGCAAACTCCAAGTGTTTGCAGGCTCTACTaGGCTGAGCACAGCCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VLSVLCCHFHEAGLQTPSVCRLY*AEHSQN Trigger: GTTTTGGCTGTGCTCAGCCAAGTAGAGCCTGCAAAC...ACTTGGAGTTTGCAGGCCAGCCTCGTGGAAGTGACAGCACAGAACAGAGAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | GCCATCTTCCTGACACACGACTGGCTTATATCCTCCTCCTCCCTGAGGACTCTGAGACACTGGGCAAACTaGTTTGCAGGCTCTACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AIFLTHDWLISSSSLRTLRHWAN*FAGSTW Trigger: CCAAGTAGAGCCTGCAAACAAGTTTGCCCAGTGTCT...CAGAGTCCTCAGGGAGGAGGAGGATATAAGCCAGTCGTGTGTCAGGAAGATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | ACTCTGCCTCTACGTGCTCTCTGTTCTGTGCTGTCACTTCCACGAGGCTGGCCTTTCTCTGTGTTTGCATaGGTCTTAACAACAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TLPLRALCSVLSLPRGWPFSVFA*VLTTAP Trigger: TGGTGCTGTTGTTAAGACCAATGCAAACACAGAGAA...AGGCCAGCCTCGTGGAAGTGACAGCACAGAACAGAGAGCACGTAGAGGCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | CCTGGAAAGAATGTCAGCAGGGGTCAGGTAACACACAGCTTAGCCATTACACACGTTTGCAGGCTCTACTaGGCTGAGCACAGCCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PGKNVSRGQVTHSLAITHVCRLY*AEHSQN Trigger: GTTTTGGCTGTGCTCAGCCAAGTAGAGCCTGCAAAC...GTGTGTAATGGCTAAGCTGTGTGTTACCTGACCCCTGCTGACATTCTTTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTTCTCCCTTCTTTCTTTCCCTGAGCTCCTTCGTCCAAGAGCTCAGTTTGAGCAAGCTCATAGGTaGGAGAGAGGCAGAGACACT | + |
|
Preference number: 5 (lower is better) Translates to: LSFSLLSFPELLRPRAQFEQAHR*ERGRDT Trigger: AGTGTCTCTGCCTCTCTCCAACCTATGAGCTTGCTC...AAACTGAGCTCTTGGACGAAGGAGCTCAGGGAAAGAAAGAAGGGAGAAGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR CAA 90 bp | GTCCTGTCCCTCATCACACTCACTGTGAACACAGACCATCAGAATCCCTTTAGATCTGGGTTCCCGTCCTaGTCCACAGGGAGGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VLSLITLTVNTDHQNPFRSGFPS*STGRSK Trigger: TTTTGACCTCCCTGTGGACAAGGACGGGAACCCAGA...TCTAAAGGGATTCTGATGGTCTGTGTTCACAGTGAGTGTGATGAGGGACAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | AGCAAGTACTTGTTGATTACTCATTGTGGACAGACAAACGGCTGTGGTCCGTCCTTCAGCTTGATGATGTaGGGGTCTGGGACCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKYLLITHCGQTNGCGPSFSLMM*GSGTTF Trigger: GAAGGTGGTCCCAGACCCCAACATCATCAAGCTGAA...GGACGGACCACAGCCGTTTGTCTGTCCACAATGAGTAATCAACAAGTACTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | AGGGGTCAGGTAACACACAGCTTAGCCATTACACACCAACCAAGTCCTAAGCAGTCCTTAAGATGCAAGTaGCTCAAAGACTCAGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RGQVTHSLAITHQPSPKQSLRCK*LKDSAA Trigger: CGCAGCTGAGTCTTTGAGCAACTTGCATCTTAAGGA...CTGCTTAGGACTTGGTTGGTGTGTAATGGCTAAGCTGTGTGTTACCTGACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR CAA 90 bp | TCTGGCCTCTGGAACTCTATACCAGTCTCGGACACTGATTCTGTAAGAAATAGGTTCAGCTTGATGATGTaGGGGTCTGGGACCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGLWNSIPVSDTDSVRNRFSLMM*GSGTTF Trigger: GAAGGTGGTCCCAGACCCCAACATCATCAAGCTGAA...CCTATTTCTTACAGAATCAGTGTCCGAGACTGGTATAGAGTTCCAGAGGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR CAA 90 bp | GATCAAAGTTGGCCAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGGAGATCCTTAAGATGCAAGTaGCTCAAACCAGTCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DQSWPGAHREFYSNTHWRSLRCK*LKPVRG Trigger: GCCCCTGACTGGTTTGAGCAACTTGCATCTTAAGGA...TCTCCAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTGGCCAACTTTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | AGGGGTCAGGTAACACACAGCTTAGCCATTACACACCAACCAAGTCCTAAGCAGTTCTCTGTGTTTGCATaGGTCTTAACAACAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RGQVTHSLAITHQPSPKQFSVFA*VLTTAP Trigger: TGGTGCTGTTGTTAAGACCAATGCAAACACAGAGAA...CTGCTTAGGACTTGGTTGGTGTGTAATGGCTAAGCTGTGTGTTACCTGACCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | AGGGGTCAGGTAACACACAGCTTAGCCATTACACACCAACCAAGTCCTAAGCAGTTAACAACAGCACCATaGGCATCTGGTTTGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGQVTHSLAITHQPSPKQLTTAP*ASGLIF Trigger: GAAAATCAAACCAGATGCCAATGGTGCTGTTGTTAA...CTGCTTAGGACTTGGTTGGTGTGTAATGGCTAAGCTGTGTGTTACCTGACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS-3UTR CAA 90 bp | GTTCTTAAGTTGAAGAATTGGAATGGGAAAAACATACTGAGCAACAGCAGTCTTAGACACTGGGCAAACTaGTTTGCAGGCTCTACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLKLKNWNGKNILSNSSLRHWAN*FAGSTW Trigger: CCAAGTAGAGCCTGCAAACAAGTTTGCCCAGTGTCT...AAGACTGCTGTTGCTCAGTATGTTTTTCCCATTCCAATTCTTCAACTTAAGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040241.15 |
||
| CDS-3UTR CAA 90 bp | AATAGATCAAAGTTGGCCAGGAGCCCACAGAGAATTCTATTCAAATACCCACTGTTAACAACAGCACCATaGGCATCTGGTTTGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NRSKLARSPQRILFKYPLLTTAP*ASGLIF Trigger: GAAAATCAAACCAGATGCCAATGGTGCTGTTGTTAA...CAGTGGGTATTTGAATAGAATTCTCTGTGGGCTCCTGGCCAACTTTGATCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||
| CDS CCA 72 bp | GTCAGGGGCAGGGAAAGTGGATTCCGAGCTTGGGCTTaGGCTCGGGCTCGGGCTCGACCTCGACCCGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VRGRESGFRAWA*ARARARPRPGQ Trigger: CTGGCCGGGTCGAGGTCGAGCCCGAGCCCGAGCCCAAGCCCAAGCTCGGAATCCACTTTCCCTGCCCCTGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065784.6 |
||
| CDS CCA 72 bp | AAACCAGTCAGGGGCAGGGAAAGTGGATTCCGAGCTTaGGCTTGGGCTCGGGCTCGGGCTCGACCTCGACCC | + |
|
Preference number: 6 (lower is better) Translates to: KPVRGRESGFRA*AWARARARPRP Trigger: GGGTCGAGGTCGAGCCCGAGCCCGAGCCCAAGCCCAAGCTCGGAATCCACTTTCCCTGCCCCTGACTGGTTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065784.6 |
||
| CDS CCA 72 bp | ATGCAAGTTGCTCAAACCAGTCAGGGGCAGGGAAAGTaGATTCCGAGCTTGGGCTTGGGCTCGGGCTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MQVAQTSQGQGK*IPSLGLGSGSG Trigger: GCCCGAGCCCGAGCCCAAGCCCAAGCTCGGAATCCACTTTCCCTGCCCCTGACTGGTTTGAGCAACTTGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065784.6 |
||
| CDS GCA 72 bp | GGTTGGAGAGAGGCAGAGACACTGGGCAAACTTGTTTaGAGGCTCTACTTGGCTGAGCACAGCCAAAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: GWREAETLGKLV*RLYLAEHSQNK Trigger: TTTGTTTTGGCTGTGCTCAGCCAAGTAGAGCCTGCAAACAAGTTTGCCCAGTGTCTCTGCCTCTCTCCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040241.15 ENSMUST00000065784.6 |
||