Pregenerated sensors for DDX18 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000001674

Ensembl transcript IDs: ENSMUST00000001724.12

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 72 bp	TGGTCCAGGAGCCGGCCGGGCGTGGCCACGATGATGTaGATCCCATTGAGGAGCTTCTGCACTTCAGCAGAC	+
Preference number: 6 (lower is better) Translates to: WSRSRPGVATMM*IPLRSFCTSAD Trigger: GTCTGCTGAAGTGCAGAAGCTCCTCAATGGGATCAACATCATCGTGGCCACGCCCGGCCGGCTCCTGGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001724.12
CDS CAA 90 bp	TTCTGCATGTGGTCCAGGAGCCGGCCGGGCGTGGCCACGATGATGTaGATCCCATTGAGGAGCTTCTGCACTTCAGCAGACCTGTTGCTG	+
Preference number: 6 (lower is better) Translates to: FCMWSRSRPGVATMM*IPLRSFCTSADLLL Trigger: CAGCAACAGGTCTGCTGAAGTGCAGAAGCTCCTCAATGGGATCAACATCATCGTGGCCACGCCCGGCCGGCTCCTGGACCACATGCAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001724.12
CDS TCA 72 bp	GACCTGTTGCTGCCGCCCATGATCAGCCCATACGTGTaGACGTGGTGCGTCATCAGCTCCTTGAGAACACCA	+
Preference number: 6 (lower is better) Translates to: DLLLPPMISPYV*TWCVISSLRTP Trigger: TGGTGTTCTCAAGGAGCTGATGACGCACCACGTTCACACGTATGGGCTGATCATGGGCGGCAGCAACAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001724.12
CDS TCA 72 bp	GCCCATACGTGTGAACGTGGTGCGTCATCAGCTCCTTaGGAACACCAAAGGTCTGCATGGCCAGTTCTCTGG	+
Preference number: 6 (lower is better) Translates to: AHTCERGASSAP*EHQRSAWPVLW Trigger: CCAGAGAACTGGCCATGCAGACCTTTGGTGTTCTCAAGGAGCTGATGACGCACCACGTTCACACGTATGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001724.12
CDS GCA 72 bp	CTTGTGTCTGATGTTTCTTGCAGCTTCAGGTTTCGCTaGCGCAGCTTGGCATTCCGCTTCTCGATCTTCCTG	+
Preference number: 6 (lower is better) Translates to: LVSDVSCSFRFR*RSLAFRFSIFL Trigger: CAGGAAGATCGAGAAGCGGAATGCCAAGCTGCGGCAGCGAAACCTGAAGCTGCAAGAAACATCAGACACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001724.12

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