Pregenerated sensors for DDRGK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068290Ensembl transcript IDs: ENSMUST00000089559.11, ENSMUST00000134044.8, ENSMUST00000135072.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CGTCAATCACACCTGTTAGAGTCCCCTCCGTCAGCAGGTCCTGGATaGGGTTTATGGCGTCCTGAGTCCTTAGGCCCATCTGGAAAGCCA | + |
Preference number: 1 (lower is better) Translates to: RQSHLLESPPSAGPG*GLWRPESLGPSGKP Trigger: TGGCTTTCCAGATGGGCCTAAGGACTCAGGACGCCATAAACCGCATCCAGGACCTGCTGACGGAGGGGACTCTAACAGGTGTGATTGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134044.8 |
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3UTR CCA 90 bp | CACCTGTTAGAGTCCCCTCCGTCAGCAGGTCCTGGATGCGGTTTATaGCGTCCTGAGTCCTTAGGCCCATCTGGAAAGCCAGATCTTCCA | + |
Preference number: 1 (lower is better) Translates to: HLLESPPSAGPGCGL*RPESLGPSGKPDLP Trigger: TGGAAGATCTGGCTTTCCAGATGGGCCTAAGGACTCAGGACGCCATAAACCGCATCCAGGACCTGCTGACGGAGGGGACTCTAACAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134044.8 |
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3UTR TCA 90 bp | AGAGTCCCCTCCGTCAGCAGGTCCTGGATGCGGTTTATGGCGTCCTaGGTCCTTAGGCCCATCTGGAAAGCCAGATCTTCCAAAAGCACA | + |
Preference number: 1 (lower is better) Translates to: RVPSVSRSWMRFMAS*VLRPIWKARSSKST Trigger: TGTGCTTTTGGAAGATCTGGCTTTCCAGATGGGCCTAAGGACTCAGGACGCCATAAACCGCATCCAGGACCTGCTGACGGAGGGGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134044.8 |
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3UTR GCA 90 bp | ATTCACAGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTaGCCCAAGACGGCATTAGGGAAGGATGAAGACACATGTAGGCCA | + |
Preference number: 1 (lower is better) Translates to: IHRPLIHNFLVIFHP*PKTALGKDEDTCRP Trigger: TGGCCTACATGTGTCTTCATCCTTCCCTAATGCCGTCTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCTGTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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3UTR CCA 90 bp | GGACTTCTTGATGTAATTGATGAATTCTGTCAGGAAGCTGTGAGATaGCACTCGACTCGCTTCTCAGTACACAGTCCCAAGTGTCTAAGG | + |
Preference number: 1 (lower is better) Translates to: GLLDVIDEFCQEAVR*HSTRFSVHSPKCLR Trigger: CCTTAGACACTTGGGACTGTGTACTGAGAAGCGAGTCGAGTGCCATCTCACAGCTTCCTGACAGAATTCATCAATTACATCAAGAAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134044.8 |
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3UTR CCA 72 bp | GAGTCCCCTCCGTCAGCAGGTCCTGGATGCGGTTTATaGCGTCCTGAGTCCTTAGGCCCATCTGGAAAGCCA | + |
Preference number: 3 (lower is better) Translates to: ESPPSAGPGCGL*RPESLGPSGKP Trigger: TGGCTTTCCAGATGGGCCTAAGGACTCAGGACGCCATAAACCGCATCCAGGACCTGCTGACGGAGGGGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134044.8 |
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3UTR GCA 72 bp | CACCTGTTAGAGTCCCCTCCGTCAGCAGGTCCTGGATaGGGTTTATGGCGTCCTGAGTCCTTAGGCCCATCT | + |
Preference number: 3 (lower is better) Translates to: HLLESPPSAGPG*GLWRPESLGPS Trigger: AGATGGGCCTAAGGACTCAGGACGCCATAAACCGCATCCAGGACCTGCTGACGGAGGGGACTCTAACAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134044.8 |
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3UTR TCA 72 bp | TCCGTCAGCAGGTCCTGGATGCGGTTTATGGCGTCCTaGGTCCTTAGGCCCATCTGGAAAGCCAGATCTTCC | + |
Preference number: 3 (lower is better) Translates to: SVSRSWMRFMAS*VLRPIWKARSS Trigger: GGAAGATCTGGCTTTCCAGATGGGCCTAAGGACTCAGGACGCCATAAACCGCATCCAGGACCTGCTGACGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134044.8 |
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3UTR CCA 72 bp | GATGTAATTGATGAATTCTGTCAGGAAGCTGTGAGATaGCACTCGACTCGCTTCTCAGTACACAGTCCCAAG | + |
Preference number: 3 (lower is better) Translates to: DVIDEFCQEAVR*HSTRFSVHSPK Trigger: CTTGGGACTGTGTACTGAGAAGCGAGTCGAGTGCCATCTCACAGCTTCCTGACAGAATTCATCAATTACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134044.8 |
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3UTR TCA 72 bp | CTGAGGTTTATTTTACCTGCTTATCTGAGACCCCAGTaGGGTCTTCTACAAACAACAAGCTCAGCAGTATTC | + |
Preference number: 3 (lower is better) Translates to: LRFILPAYLRPQ*GLLQTTSSAVF Trigger: GAATACTGCTGAGCTTGTTGTTTGTAGAAGACCTCACTGGGGTCTCAGATAAGCAGGTAAAATAAACCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR TCA 90 bp | CCCTGCCCCAAGACGGCATTAGGGAAGGATGAAGACACATGTAGGCCACAGGATCCTGGGCAAGCTCTGTaGTGGACACCCGGCCCCGCT | + |
Preference number: 4 (lower is better) Translates to: PCPKTALGKDEDTCRPQDPGQAL*WTPGPA Trigger: AGCGGGGCCGGGTGTCCATCACAGAGCTTGCCCAGG...ATCCTGTGGCCTACATGTGTCTTCATCCTTCCCTAATGCCGTCTTGGGGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR GCA 90 bp | ACACCTGTTAGAGTCCCCTCCGTCAGCAGGTCCTGGATGCGGTTTATGGCGTCCAGTGATGGGCCCACCTaGTCCTCAGTCATGGTTTCG | + |
Preference number: 4 (lower is better) Translates to: TPVRVPSVSRSWMRFMASSDGPT*SSVMVS Trigger: CGAAACCATGACTGAGGAGCAGGTGGGCCCATCACT...GGACGCCATAAACCGCATCCAGGACCTGCTGACGGAGGGGACTCTAACAGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134044.8 |
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CDS-3UTR CCA 90 bp | CAGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGACGGCTGGGCAGGGAGGTCCTaGCCCCAGGAGATGAGGGAG | + |
Preference number: 4 (lower is better) Translates to: QAFNPQLSGHIPSLPQDGWAGRS*PQEMRE Trigger: CTCCCTCATCTCCTGGGGCCAGGACCTCCCTGCCCA...GCCGTCTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CCA 90 bp | ATTCACAGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGTCCCAGGCCACTCGCTaGGCTCGACGCTGGGCCTGT | + |
Preference number: 4 (lower is better) Translates to: IHRPLIHNFLVIFHPCPKSQATR*ARRWAC Trigger: ACAGGCCCAGCGTCGAGCCCAGCGAGTGGCCTGGGA...CTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCTGTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR TCA 90 bp | ACCCCAGTGAGGTCTTCTACAAACAACAAGCTCAGCAGTATTCACAGGCCTTTAGGCCCCGCTGTCGGATaGAATTGGCCACGGCAGCCA | + |
Preference number: 4 (lower is better) Translates to: TPVRSSTNNKLSSIHRPLGPAVG*NWPRQP Trigger: TGGCTGCCGTGGCCAATTTCATCCGACAGCGGGGCC...TAAAGGCCTGTGAATACTGCTGAGCTTGTTGTTTGTAGAAGACCTCACTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR TCA 90 bp | TCCTTAGGCCCATCTGGAAAGCCAGATCTTCCAAAAGCACAACCTTGGACTTCTCAGATCTCCCAGGAGTaGTGGGCCCACCTGCTCCTC | + |
Preference number: 4 (lower is better) Translates to: SLGPSGKPDLPKAQPWTSQISQE*WAHLLL Trigger: GAGGAGCAGGTGGGCCCATCACTCCTGGGAGATCTG...AGAAGTCCAAGGTTGTGCTTTTGGAAGATCTGGCTTTCCAGATGGGCCTAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134044.8 |
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CDS-3UTR CCA 90 bp | GAGGTTTATTTTACCTGCTTATCTGAGACCCCAGTGAGGTCTTCTACAAACAACCGCTGGGCTCGACGCTaGGCCTGTAGACGGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: EVYFTCLSETPVRSSTNNRWARR*ACRRLP Trigger: GGGCAGCCGTCTACAGGCCCAGCGTCGAGCCCAGCG...GTTGTTTGTAGAAGACCTCACTGGGGTCTCAGATAAGCAGGTAAAATAAACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CCA 90 bp | CAGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGACGGCTCCGTCAGCAGGTCCTaGATGCGGTTTATGGCGTCC | + |
Preference number: 4 (lower is better) Translates to: QAFNPQLSGHIPSLPQDGSVSRS*MRFMAS Trigger: GGACGCCATAAACCGCATCCAGGACCTGCTGACGGA...GCCGTCTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR GCA 90 bp | AGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGACGGCAACGTTCAGCCTCCTCTaGCTCTCGCTGAGCCTTTCG | + |
Preference number: 4 (lower is better) Translates to: RPLIHNFLVIFHPCPKTATFSLL*LSLSLS Trigger: CGAAAGGCTCAGCGAGAGGCAGAGGAGGCTGAACGT...TGCCGTCTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR GCA 90 bp | CAGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGACGGCTCAGCAGGTCCTGGATaGGGTTTATGGCGTCCTGAG | + |
Preference number: 4 (lower is better) Translates to: QAFNPQLSGHIPSLPQDGSAGPG*GLWRPE Trigger: CTCAGGACGCCATAAACCGCATCCAGGACCTGCTGA...GCCGTCTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CCA 90 bp | AGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGACGGCAAGGGAGTTGCTGGCCTaGGCAAGCTCTGTGATGGAC | + |
Preference number: 4 (lower is better) Translates to: RPLIHNFLVIFHPCPKTARELLA*ASSVMD Trigger: GTCCATCACAGAGCTTGCCCAGGCCAGCAACTCCCT...TGCCGTCTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CCA 90 bp | TCAATCACACCTGTTAGAGTCCCCTCCGTCAGCAGGTCCTGGATGCGGTTTATGCACACACTACCCTCATaGCACAGATCTCCCAGGAGT | + |
Preference number: 4 (lower is better) Translates to: SITPVRVPSVSRSWMRFMHTLPS*HRSPRS Trigger: ACTCCTGGGAGATCTGTGCCATGAGGGTAGTGTGTG...CATAAACCGCATCCAGGACCTGCTGACGGAGGGGACTCTAACAGGTGTGATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134044.8 |
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CDS-3UTR TCA 90 bp | AGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGACGGCATCCTCTGCCTCTCGCTaGGCCTTTCGAGCCTGTTTT | + |
Preference number: 4 (lower is better) Translates to: RPLIHNFLVIFHPCPKTASSASR*AFRACF Trigger: AAAACAGGCTCGAAAGGCTCAGCGAGAGGCAGAGGA...TGCCGTCTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR GCA 90 bp | GAGGTTTATTTTACCTGCTTATCTGAGACCCCAGTGAGGTCTTCTACAAACAACCCGCCCGACCCCGGCTaGGAGTCAGGAAGAGGATCA | + |
Preference number: 4 (lower is better) Translates to: EVYFTCLSETPVRSSTNNPPDPG*ESGRGS Trigger: TGATCCTCTTCCTGACTCGCAGCCGGGGTCGGGCGG...GTTGTTTGTAGAAGACCTCACTGGGGTCTCAGATAAGCAGGTAAAATAAACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR GCA 90 bp | GAGGTTTATTTTACCTGCTTATCTGAGACCCCAGTGAGGTCTTCTACAAACAACGCGGCCTACCTGGCCTaGTCCTGCCCTCTCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: EVYFTCLSETPVRSSTNNAAYLA*SCPLFL Trigger: GAGGAAGAGAGGGCAGGAGCAGGCCAGGTAGGCCGC...GTTGTTTGTAGAAGACCTCACTGGGGTCTCAGATAAGCAGGTAAAATAAACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CCA 90 bp | GAGACCCCAGTGAGGTCTTCTACAAACAACAAGCTCAGCAGTATTCACAGGCCTTGTTCTTCAGACTCCTaGGGCAAAGAGCGGCCTACC | + |
Preference number: 4 (lower is better) Translates to: ETPVRSSTNNKLSSIHRPCSSDS*GKERPT Trigger: GGTAGGCCGCTCTTTGCCCCAGGAGTCTGAAGAACA...AGGCCTGTGAATACTGCTGAGCTTGTTGTTTGTAGAAGACCTCACTGGGGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR TCA 90 bp | GAGACCCCAGTGAGGTCTTCTACAAACAACAAGCTCAGCAGTATTCACAGGCCTTCTGTCAGGAAGCTGTaGGACTGCTCCTCAGTCATG | + |
Preference number: 4 (lower is better) Translates to: ETPVRSSTNNKLSSIHRPSVRKL*DCSSVM Trigger: CATGACTGAGGAGCAGTCTCACAGCTTCCTGACAGA...AGGCCTGTGAATACTGCTGAGCTTGTTGTTTGTAGAAGACCTCACTGGGGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR GCA 90 bp | ATTCACAGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGTACCTGGCCTGCTCCTaGCCTCTCTTCCTCATTGTG | + |
Preference number: 4 (lower is better) Translates to: IHRPLIHNFLVIFHPCPKYLACS*PLFLIV Trigger: CACAATGAGGAAGAGAGGGCAGGAGCAGGCCAGGTA...CTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCTGTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR TCA 90 bp | AGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGACGGCAATTTTCCCTGTTGGGTaGACTTCTGCTGGCTTCTCA | + |
Preference number: 4 (lower is better) Translates to: RPLIHNFLVIFHPCPKTAIFPVG*TSAGFS Trigger: TGAGAAGCCAGCAGAAGTTCACCCAACAGGGAAAAT...TGCCGTCTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CCA 90 bp | GAGACCCCAGTGAGGTCTTCTACAAACAACAAGCTCAGCAGTATTCACAGGCCTTTCTTCCTCCTGGGCTaGAATAACAGTTTGACCCAC | + |
Preference number: 4 (lower is better) Translates to: ETPVRSSTNNKLSSIHRPFFLLG*NNSLTH Trigger: GTGGGTCAAACTGTTATTCCAGCCCAGGAGGAAGAA...AGGCCTGTGAATACTGCTGAGCTTGTTGTTTGTAGAAGACCTCACTGGGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CCA 90 bp | GAGACCCCAGTGAGGTCTTCTACAAACAACAAGCTCAGCAGTATTCACAGGCCTTGGGTGAACTTCTGCTaGCTTCTCAATGCCTTCTTC | + |
Preference number: 4 (lower is better) Translates to: ETPVRSSTNNKLSSIHRPWVNFC*LLNAFF Trigger: GAAGAAGGCATTGAGAAGCCAGCAGAAGTTCACCCA...AGGCCTGTGAATACTGCTGAGCTTGTTGTTTGTAGAAGACCTCACTGGGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR GCA 90 bp | GAGGTTTATTTTACCTGCTTATCTGAGACCCCAGTGAGGTCTTCTACAAACAACTCCGACGCCGGGGTCTaGTTCCAGTTCTCTGTTCTT | + |
Preference number: 4 (lower is better) Translates to: EVYFTCLSETPVRSSTNNSDAGV*FQFSVL Trigger: AAGAACAGAGAACTGGAAGCAGACCCCGGCGTCGGA...GTTGTTTGTAGAAGACCTCACTGGGGTCTCAGATAAGCAGGTAAAATAAACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CCA 90 bp | GACCCCAGTGAGGTCTTCTACAAACAACAAGCTCAGCAGTATTCACAGGCCTTTGTCCTTAGGCCCATCTaGAAAGCCAGATCTTCCAAA | + |
Preference number: 4 (lower is better) Translates to: DPSEVFYKQQAQQYSQAFVLRPI*KARSSK Trigger: TTTGGAAGATCTGGCTTTCCAGATGGGCCTAAGGAC...AAAGGCCTGTGAATACTGCTGAGCTTGTTGTTTGTAGAAGACCTCACTGGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CCA 90 bp | AGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGACGGCAGGCAGCCAGTTCCTCTaGGGTTATGTAGATAAACTT | + |
Preference number: 4 (lower is better) Translates to: RPLIHNFLVIFHPCPKTAGSQFL*GYVDKL Trigger: AAGTTTATCTACATAACCCCAGAGGAACTGGCTGCC...TGCCGTCTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR TCA 90 bp | CTCAGCAGTATTCACAGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCGCTGGAATAACAGTTTaGCCCACATTCTCATCCCCG | + |
Preference number: 4 (lower is better) Translates to: LSSIHRPLIHNFLVIFHPAGITV*PTFSSP Trigger: CGGGGATGAGAATGTGGGTCAAACTGTTATTCCAGC...GGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCTGTGAATACTGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CCA 90 bp | ATTCACAGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGGCTTCCGTAGTTTCTTaGCTCCAATTTTCCCTGTTG | + |
Preference number: 4 (lower is better) Translates to: IHRPLIHNFLVIFHPCPKASVVS*LQFSLL Trigger: CAACAGGGAAAATTGGAGCCAAGAAACTACGGAAGC...CTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCTGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR GCA 90 bp | GAGGTTTATTTTACCTGCTTATCTGAGACCCCAGTGAGGTCTTCTACAAACAACTGTTGGGTGAACTTCTaGTGGCTTCTCAATGCCTTC | + |
Preference number: 4 (lower is better) Translates to: EVYFTCLSETPVRSSTNNCWVNF*WLLNAF Trigger: GAAGGCATTGAGAAGCCAGCAGAAGTTCACCCAACA...GTTGTTTGTAGAAGACCTCACTGGGGTCTCAGATAAGCAGGTAAAATAAACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS GCA 90 bp | CTTCCCAGGCCACTCGCTGGGCTCGACGCTGGGCCTGTAGACGGCTaGCCAAGTCCCTCCGACGCCGGGGTCTGCTTCCAGTTCTCTGTT | + |
Preference number: 5 (lower is better) Translates to: LPRPLAGLDAGPVDG*PSPSDAGVCFQFSV Trigger: AACAGAGAACTGGAAGCAGACCCCGGCGTCGGAGGGACTTGGGCAGCCGTCTACAGGCCCAGCGTCGAGCCCAGCGAGTGGCCTGGGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CCA 90 bp | TGGGCAGGGAGGTCCTGGCCCCAGGAGATGAGGGAGTTGCTGGCCTaGGCAAGCTCTGTGATGGACACCCGGCCCCGCTGTCGGATGAAA | + |
Preference number: 5 (lower is better) Translates to: WAGRSWPQEMRELLA*ASSVMDTRPRCRMK Trigger: TTTCATCCGACAGCGGGGCCGGGTGTCCATCACAGAGCTTGCCCAGGCCAGCAACTCCCTCATCTCCTGGGGCCAGGACCTCCCTGCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS GCA 90 bp | GCTGGGCCTGTAGACGGCTGCCCAAGTCCCTCCGACGCCGGGGTCTaGTTCCAGTTCTCTGTTCTTCAGACTCCTGGGGCAAAGAGCGGC | + |
Preference number: 5 (lower is better) Translates to: AGPVDGCPSPSDAGV*FQFSVLQTPGAKSG Trigger: GCCGCTCTTTGCCCCAGGAGTCTGAAGAACAGAGAACTGGAAGCAGACCCCGGCGTCGGAGGGACTTGGGCAGCCGTCTACAGGCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS GCA 90 bp | TCCTGCCCTCTCTTCCTCATTGTGCAGTGGTTCTCCGTCAGCTGCTaGCGCCCGACCCCGGCTGCGAGTCAGGAAGAGGATCAGGCCGAT | + |
Preference number: 5 (lower is better) Translates to: SCPLFLIVQWFSVSC*RPTPAASQEEDQAD Trigger: ATCGGCCTGATCCTCTTCCTGACTCGCAGCCGGGGTCGGGCGGCAGCAGCTGACGGAGAACCACTGCACAATGAGGAAGAGAGGGCAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CCA 90 bp | CTCCGACGCCGGGGTCTGCTTCCAGTTCTCTGTTCTTCAGACTCCTaGGGCAAAGAGCGGCCTACCTGGCCTGCTCCTGCCCTCTCTTCC | + |
Preference number: 5 (lower is better) Translates to: LRRRGLLPVLCSSDS*GKERPTWPAPALSS Trigger: GGAAGAGAGGGCAGGAGCAGGCCAGGTAGGCCGCTCTTTGCCCCAGGAGTCTGAAGAACAGAGAACTGGAAGCAGACCCCGGCGTCGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS GCA 90 bp | TTCTTCAGACTCCTGGGGCAAAGAGCGGCCTACCTGGCCTGCTCCTaGCCTCTCTTCCTCATTGTGCAGTGGTTCTCCGTCAGCTGCTGC | + |
Preference number: 5 (lower is better) Translates to: FFRLLGQRAAYLACS*PLFLIVQWFSVSCC Trigger: GCAGCAGCTGACGGAGAACCACTGCACAATGAGGAAGAGAGGGCAGGAGCAGGCCAGGTAGGCCGCTCTTTGCCCCAGGAGTCTGAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS TCA 90 bp | TTCAGTTTCAGGTACTCCTCGTGCTCCCGCCGGGCCTGCTCCTCCTaGGCCTTCCTCTCTTCCTCCTCCTTCTGTTCTTCCTTCAGGCGA | + |
Preference number: 5 (lower is better) Translates to: FSFRYSSCSRRACSS*AFLSSSSFCSSFRR Trigger: TCGCCTGAAGGAAGAACAGAAGGAGGAGGAAGAGAGGAAGGCTCAGGAGGAGCAGGCCCGGCGGGAGCACGAGGAGTACCTGAAACTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS GCA 90 bp | TCTCTGTTCTTCAGACTCCTGGGGCAAAGAGCGGCCTACCTGGCCTaGTCCTGCCCTCTCTTCCTCATTGTGCAGTGGTTCTCCGTCAGC | + |
Preference number: 5 (lower is better) Translates to: SLFFRLLGQRAAYLA*SCPLFLIVQWFSVS Trigger: GCTGACGGAGAACCACTGCACAATGAGGAAGAGAGGGCAGGAGCAGGCCAGGTAGGCCGCTCTTTGCCCCAGGAGTCTGAAGAACAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CCA 90 bp | CCGGCCCCGCTGTCGGATGAAATTGGCCACGGCAGCCAGTTCCTCTaGGGTTATGTAGATAAACTTGCCCCGGTCGTCAATCACACCTGT | + |
Preference number: 5 (lower is better) Translates to: PAPLSDEIGHGSQFL*GYVDKLAPVVNHTC Trigger: ACAGGTGTGATTGACGACCGGGGCAAGTTTATCTACATAACCCCAGAGGAACTGGCTGCCGTGGCCAATTTCATCCGACAGCGGGGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CCA 90 bp | TTCAGGCGAAGCCGTTCCTCTTCCTTCTTCCATTCGGCCTCACGTTaGGACTCTAGGCGTTTCCGTTCTTCACGTTCAGCCTCCTCTGCC | + |
Preference number: 5 (lower is better) Translates to: FRRSRSSSFFHSASR*DSRRFRSSRSASSA Trigger: GGCAGAGGAGGCTGAACGTGAAGAACGGAAACGCCTAGAGTCCCAACGTGAGGCCGAATGGAAGAAGGAAGAGGAACGGCTTCGCCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089559.11 ENSMUST00000135072.2 |
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CDS GCA 90 bp | ACACTACCCTCATGGCACAGATCTCCCAGGAGTGATGGGCCCACCTaGTCCTCAGTCATGGTTTCGCTAACACCTTCTTCTTCTACCACG | + |
Preference number: 5 (lower is better) Translates to: TLPSWHRSPRSDGPT*SSVMVSLTPSSSTT Trigger: CGTGGTAGAAGAAGAAGGTGTTAGCGAAACCATGACTGAGGAGCAGGTGGGCCCATCACTCCTGGGAGATCTGTGCCATGAGGGTAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134044.8 |
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CDS TCA 90 bp | TCTAGGCGTTTCCGTTCTTCACGTTCAGCCTCCTCTGCCTCTCGCTaGGCCTTTCGAGCCTGTTTTTCCTCTAGCTTCCGTAGTTTCTTG | + |
Preference number: 5 (lower is better) Translates to: SRRFRSSRSASSASR*AFRACFSSSFRSFL Trigger: CAAGAAACTACGGAAGCTAGAGGAAAAACAGGCTCGAAAGGCTCAGCGAGAGGCAGAGGAGGCTGAACGTGAAGAACGGAAACGCCTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CAA 90 bp | ATTCACAGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGCGCTGTCGGATGAAATaGGCCACGGCAGCCAGTTCC | + |
Preference number: 5 (lower is better) Translates to: IHRPLIHNFLVIFHPCPKRCRMK*ATAASS Trigger: GGAACTGGCTGCCGTGGCCAATTTCATCCGACAGCG...CTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCTGTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CAA 90 bp | ACCCCAGTGAGGTCTTCTACAAACAACAAGCTCAGCAGTATTCACAGGCCTTTACAGGAGATGAGGGAGTaGCTGGCCTGGGCAAGCTCT | + |
Preference number: 5 (lower is better) Translates to: TPVRSSTNNKLSSIHRPLQEMRE*LAWASS Trigger: AGAGCTTGCCCAGGCCAGCAACTCCCTCATCTCCTG...TAAAGGCCTGTGAATACTGCTGAGCTTGTTGTTTGTAGAAGACCTCACTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS TCA 90 bp | TCCTCTAGCTTCCGTAGTTTCTTGGCTCCAATTTTCCCTGTTGGGTaGACTTCTGCTGGCTTCTCAATGCCTTCTTCCTCCTGGGCTGGA | + |
Preference number: 5 (lower is better) Translates to: SSSFRSFLAPIFPVG*TSAGFSMPSSSWAG Trigger: TCCAGCCCAGGAGGAAGAAGGCATTGAGAAGCCAGCAGAAGTTCACCCAACAGGGAAAATTGGAGCCAAGAAACTACGGAAGCTAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CAA 90 bp | CCCTGCCCCAAGACGGCATTAGGGAAGGATGAAGACACATGTAGGCCACAGGATAGCTTCCGTAGTTTCTaGGCTCCAATTTTCCCTGTT | + |
Preference number: 5 (lower is better) Translates to: PCPKTALGKDEDTCRPQDSFRSF*APIFPV Trigger: AACAGGGAAAATTGGAGCCAAGAAACTACGGAAGCT...ATCCTGTGGCCTACATGTGTCTTCATCCTTCCCTAATGCCGTCTTGGGGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS-3UTR CAA 90 bp | AGGCCTTTAATCCACAACTTTCTGGTCATATTCCATCCCTGCCCCAAGACGGCAGGCTGGAATAACAGTTaGACCCACATTCTCATCCCC | + |
Preference number: 5 (lower is better) Translates to: RPLIHNFLVIFHPCPKTAGWNNS*THILIP Trigger: GGGGATGAGAATGTGGGTCAAACTGTTATTCCAGCC...TGCCGTCTTGGGGCAGGGATGGAATATGACCAGAAAGTTGTGGATTAAAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CCA 90 bp | GCTGAGCCTTTCGAGCCTGTTTTTCCTCTAGCTTCCGTAGTTTCTTaGCTCCAATTTTCCCTGTTGGGTGAACTTCTGCTGGCTTCTCAA | + |
Preference number: 5 (lower is better) Translates to: AEPFEPVFPLASVVS*LQFSLLGELLLASQ Trigger: TTGAGAAGCCAGCAGAAGTTCACCCAACAGGGAAAATTGGAGCCAAGAAACTACGGAAGCTAGAGGAAAAACAGGCTCGAAAGGCTCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS GCA 72 bp | CCACTCGCTGGGCTCGACGCTGGGCCTGTAGACGGCTaGCCAAGTCCCTCCGACGCCGGGGTCTGCTTCCAG | + |
Preference number: 6 (lower is better) Translates to: PLAGLDAGPVDG*PSPSDAGVCFQ Trigger: CTGGAAGCAGACCCCGGCGTCGGAGGGACTTGGGCAGCCGTCTACAGGCCCAGCGTCGAGCCCAGCGAGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CCA 72 bp | TCCCCGTCTTCCCAGGCCACTCGCTGGGCTCGACGCTaGGCCTGTAGACGGCTGCCCAAGTCCCTCCGACGC | + |
Preference number: 6 (lower is better) Translates to: SPSSQATRWARR*ACRRLPKSLRR Trigger: GCGTCGGAGGGACTTGGGCAGCCGTCTACAGGCCCAGCGTCGAGCCCAGCGAGTGGCCTGGGAAGACGGGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CAA 90 bp | GCTGAAGCCTGGGCAGGGAGGTCCTGGCCCCAGGAGATGAGGGAGTaGCTGGCCTGGGCAAGCTCTGTGATGGACACCCGGCCCCGCTGT | + |
Preference number: 6 (lower is better) Translates to: AEAWAGRSWPQEMRE*LAWASSVMDTRPRC Trigger: ACAGCGGGGCCGGGTGTCCATCACAGAGCTTGCCCAGGCCAGCAACTCCCTCATCTCCTGGGGCCAGGACCTCCCTGCCCAGGCTTCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CCA 72 bp | AGGTCCTGGCCCCAGGAGATGAGGGAGTTGCTGGCCTaGGCAAGCTCTGTGATGGACACCCGGCCCCGCTGT | + |
Preference number: 6 (lower is better) Translates to: RSWPQEMRELLA*ASSVMDTRPRC Trigger: ACAGCGGGGCCGGGTGTCCATCACAGAGCTTGCCCAGGCCAGCAACTCCCTCATCTCCTGGGGCCAGGACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CAA 72 bp | TGGGCAGGGAGGTCCTGGCCCCAGGAGATGAGGGAGTaGCTGGCCTGGGCAAGCTCTGTGATGGACACCCGG | + |
Preference number: 6 (lower is better) Translates to: WAGRSWPQEMRE*LAWASSVMDTR Trigger: CCGGGTGTCCATCACAGAGCTTGCCCAGGCCAGCAACTCCCTCATCTCCTGGGGCCAGGACCTCCCTGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS TCA 72 bp | GACCCCGGCTGCGAGTCAGGAAGAGGATCAGGCCGATaGGCAAAACTGCCGCCACCAGATACACCCAGGGCC | + |
Preference number: 6 (lower is better) Translates to: DPGCESGRGSGR*AKLPPPDTPRA Trigger: GGCCCTGGGTGTATCTGGTGGCGGCAGTTTTGCTCATCGGCCTGATCCTCTTCCTGACTCGCAGCCGGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS GCA 72 bp | CCTCTCTTCCTCATTGTGCAGTGGTTCTCCGTCAGCTaGTGCCGCCCGACCCCGGCTGCGAGTCAGGAAGAG | + |
Preference number: 6 (lower is better) Translates to: PLFLIVQWFSVS*CRPTPAASQEE Trigger: CTCTTCCTGACTCGCAGCCGGGGTCGGGCGGCAGCAGCTGACGGAGAACCACTGCACAATGAGGAAGAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS GCA 72 bp | CTCTTCCTCATTGTGCAGTGGTTCTCCGTCAGCTGCTaGCGCCCGACCCCGGCTGCGAGTCAGGAAGAGGAT | + |
Preference number: 6 (lower is better) Translates to: LFLIVQWFSVSC*RPTPAASQEED Trigger: ATCCTCTTCCTGACTCGCAGCCGGGGTCGGGCGGCAGCAGCTGACGGAGAACCACTGCACAATGAGGAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CCA 72 bp | CGGGGTCTGCTTCCAGTTCTCTGTTCTTCAGACTCCTaGGGCAAAGAGCGGCCTACCTGGCCTGCTCCTGCC | + |
Preference number: 6 (lower is better) Translates to: RGLLPVLCSSDS*GKERPTWPAPA Trigger: GGCAGGAGCAGGCCAGGTAGGCCGCTCTTTGCCCCAGGAGTCTGAAGAACAGAGAACTGGAAGCAGACCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS GCA 72 bp | TTCAGACTCCTGGGGCAAAGAGCGGCCTACCTGGCCTaGTCCTGCCCTCTCTTCCTCATTGTGCAGTGGTTC | + |
Preference number: 6 (lower is better) Translates to: FRLLGQRAAYLA*SCPLFLIVQWF Trigger: GAACCACTGCACAATGAGGAAGAGAGGGCAGGAGCAGGCCAGGTAGGCCGCTCTTTGCCCCAGGAGTCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CCA 72 bp | AGCCGTTCCTCTTCCTTCTTCCATTCGGCCTCACGTTaGGACTCTAGGCGTTTCCGTTCTTCACGTTCAGCC | + |
Preference number: 6 (lower is better) Translates to: SRSSSFFHSASR*DSRRFRSSRSA Trigger: GGCTGAACGTGAAGAACGGAAACGCCTAGAGTCCCAACGTGAGGCCGAATGGAAGAAGGAAGAGGAACGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089559.11 ENSMUST00000135072.2 |
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CDS CAA 72 bp | CTCAATGCCTTCTTCCTCCTGGGCTGGAATAACAGTTaGACCCACATTCTCATCCCCGTCTTCCCAGGCCAC | + |
Preference number: 6 (lower is better) Translates to: LNAFFLLGWNNS*THILIPVFPGH Trigger: GTGGCCTGGGAAGACGGGGATGAGAATGTGGGTCAAACTGTTATTCCAGCCCAGGAGGAAGAAGGCATTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS TCA 72 bp | TCAATGCCTTCTTCCTCCTGGGCTGGAATAACAGTTTaGCCCACATTCTCATCCCCGTCTTCCCAGGCCACT | + |
Preference number: 6 (lower is better) Translates to: SMPSSSWAGITV*PTFSSPSSQAT Trigger: AGTGGCCTGGGAAGACGGGGATGAGAATGTGGGTCAAACTGTTATTCCAGCCCAGGAGGAAGAAGGCATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CCA 72 bp | CTGTCGGATGAAATTGGCCACGGCAGCCAGTTCCTCTaGGGTTATGTAGATAAACTTGCCCCGGTCGTCAAT | + |
Preference number: 6 (lower is better) Translates to: LSDEIGHGSQFL*GYVDKLAPVVN Trigger: ATTGACGACCGGGGCAAGTTTATCTACATAACCCCAGAGGAACTGGCTGCCGTGGCCAATTTCATCCGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CAA 90 bp | GTTTTTCCTCTAGCTTCCGTAGTTTCTTGGCTCCAATTTTCCCTGTaGGGTGAACTTCTGCTGGCTTCTCAATGCCTTCTTCCTCCTGGG | + |
Preference number: 6 (lower is better) Translates to: VFPLASVVSWLQFSL*GELLLASQCLLPPG Trigger: CCCAGGAGGAAGAAGGCATTGAGAAGCCAGCAGAAGTTCACCCAACAGGGAAAATTGGAGCCAAGAAACTACGGAAGCTAGAGGAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS TCA 72 bp | TTCCGTAGTTTCTTGGCTCCAATTTTCCCTGTTGGGTaGACTTCTGCTGGCTTCTCAATGCCTTCTTCCTCC | + |
Preference number: 6 (lower is better) Translates to: FRSFLAPIFPVG*TSAGFSMPSSS Trigger: GGAGGAAGAAGGCATTGAGAAGCCAGCAGAAGTTCACCCAACAGGGAAAATTGGAGCCAAGAAACTACGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CCA 72 bp | TTCGAGCCTGTTTTTCCTCTAGCTTCCGTAGTTTCTTaGCTCCAATTTTCCCTGTTGGGTGAACTTCTGCTG | + |
Preference number: 6 (lower is better) Translates to: FEPVFPLASVVS*LQFSLLGELLL Trigger: CAGCAGAAGTTCACCCAACAGGGAAAATTGGAGCCAAGAAACTACGGAAGCTAGAGGAAAAACAGGCTCGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |
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CDS CAA 72 bp | CTAGCTTCCGTAGTTTCTTGGCTCCAATTTTCCCTGTaGGGTGAACTTCTGCTGGCTTCTCAATGCCTTCTT | + |
Preference number: 6 (lower is better) Translates to: LASVVSWLQFSL*GELLLASQCLL Trigger: AAGAAGGCATTGAGAAGCCAGCAGAAGTTCACCCAACAGGGAAAATTGGAGCCAAGAAACTACGGAAGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089559.11 |