Pregenerated sensors for DDOST (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028757Ensembl transcript IDs: ENSMUST00000030538.5
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCACTACACTGTGGGTGTGTGATCCCCACCTCCATGAGGAGAGATaGGAGGCACGGAGGCTCTGGCACAGTGTCCCTAGGCAGCAGCCC | + |
|
Preference number: 1 (lower is better) Translates to: STTLWVCDPHLHEER*EARRLWHSVPRQQP Trigger: GGGCTGCTGCCTAGGGACACTGTGCCAGAGCCTCCGTGCCTCTCATCTCTCCTCATGGAGGTGGGGATCACACACCCACAGTGTAGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| 3UTR-3UTR TCA 90 bp | ACCATTATAGAAGGTTGTGAGCTGCCATGTGGGTGCTGGGACTTGAACCTGGGTTGTCATGGGGCCAGGTaGCAGGTGAGGGCAGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: TIIEGCELPCGCWDLNLGCHGAR*QVRAVV Trigger: AACCACTGCCCTCACCTGTCACCTGGCCCCATGACA...ACCCAGGTTCAAGTCCCAGCACCCACATGGCAGCTCACAACCTTCTATAATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| 3UTR-3UTR CCA 90 bp | ATACCTGGTCTCCTGGGAGGCCACAAAAGGGCATCAGATCTCCTCAGACTACCACCATCATCAGTGTCATaGGGCCAGGTGACAGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: IPGLLGGHKRASDLLRLPPSSVS*GQVTGE Trigger: CTCACCTGTCACCTGGCCCCATGACACTGATGATGG...TGGTAGTCTGAGGAGATCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| 3UTR-3UTR TCA 90 bp | ACGATGTATCACTTAAATACCTGGTCTCCTGGGAGGCCACAAAAGGGCATCAGAGTGGGTGCTGGGACTTaGACCTGGGTCCTCTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: TMYHLNTWSPGRPQKGIRVGAGT*TWVLCS Trigger: ACTGCAGAGGACCCAGGTTCAAGTCCCAGCACCCAC...TCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTATTTAAGTGATACATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| 3UTR-3UTR GCA 90 bp | TTAAATACCTGGTCTCCTGGGAGGCCACAAAAGGGCATCAGATCTCCTCAGACTGAGCTGCCATGTGGGTaGTGGGACTTGAACCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LNTWSPGRPQKGIRSPQTELPCG*WDLNLG Trigger: ACCCAGGTTCAAGTCCCAGCACCCACATGGCAGCTC...AGTCTGAGGAGATCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTATTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| 3UTR-3UTR GCA 90 bp | ACGATGTATCACTTAAATACCTGGTCTCCTGGGAGGCCACAAAAGGGCATCAGATGCACATACAAAAATTaGCACAGAGTGATTCAAACT | + |
|
Preference number: 2 (lower is better) Translates to: TMYHLNTWSPGRPQKGIRCTYKN*HRVIQT Trigger: AGTTTGAATCACTCTGTGGCAATTTTTGTATGTGCA...TCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTATTTAAGTGATACATCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| 3UTR TCA 72 bp | CTGTGGGTGTGTGATCCCCACCTCCATGAGGAGAGATaGGAGGCACGGAGGCTCTGGCACAGTGTCCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LWVCDPHLHEER*EARRLWHSVPR Trigger: CCTAGGGACACTGTGCCAGAGCCTCCGTGCCTCTCATCTCTCCTCATGGAGGTGGGGATCACACACCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| 3UTR TCA 72 bp | CAGCAGCCCTGCCATCATCAGTGTCATGGGGCCAGGTaGCAGGTGAGGGCAGTGGTTCTCTTTATTTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QQPCHHQCHGAR*QVRAVVLFILE Trigger: TTCTAAAATAAAGAGAACCACTGCCCTCACCTGTCACCTGGCCCCATGACACTGATGATGGCAGGGCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| 3UTR TCA 72 bp | CATCAGATCTCCTCAGACTACCATTATAGAAGGTTGTaGGCTGCCATGTGGGTGCTGGGACTTGAACCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HQISSDYHYRRL*AAMWVLGLEPG Trigger: CCCAGGTTCAAGTCCCAGCACCCACATGGCAGCTCACAACCTTCTATAATGGTAGTCTGAGGAGATCTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| 3UTR-3UTR CAA 90 bp | GCAATTCTTAGGCCAGCTGTCAGTCTAGTTTCCACTACACTGTGGGTGTGTGATCTGCACATACAAAAATaGCCACAGAGTGATTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: AILRPAVSLVSTTLWVCDLHIQK*PQSDSN Trigger: GTTTGAATCACTCTGTGGCAATTTTTGTATGTGCAG...ATCACACACCCACAGTGTAGTGGAAACTAGACTGACAGCTGGCCTAAGAATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| 3UTR CCA 72 bp | GTTTTGTCTGTACATACGATGTATCACTTAAATACCTaGTCTCCTGGGAGGCCACAAAAGGGCATCAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: VLSVHTMYHLNT*SPGRPQKGIRS Trigger: AGATCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTATTTAAGTGATACATCGTATGTACAGACAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR TCA 90 bp | AGAGATGAGAGGCACGGAGGCTCTGGCACAGTGTCCCTAGGCAGCAGCCCTGCCACTCCACCAAGTCGGTaGCAGTGTAGGCATTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDERHGGSGTVSLGSSPATPPSR*QCRHWV Trigger: CACCCAATGCCTACACTGTCACCGACTTGGTGGAGT...GGCAGGGCTGCTGCCTAGGGACACTGTGCCAGAGCCTCCGTGCCTCTCATCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CCA 90 bp | TACAAAACAAAACAGAACCCGACCGATCCATTCGTGATGGCCTCGGCCGTACTGCCCGGGCGTTGTTCCTaGCCTGGAGCCCGGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: YKTKQNPTDPFVMASAVLPGRCS*PGARQS Trigger: TGATTGCCGGGCTCCAGGCCAGGAACAACGCCCGGG...CAGTACGGCCGAGGCCATCACGAATGGATCGGTCGGGTTCTGTTTTGTTTTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR TCA 90 bp | ACCATTATAGAAGGTTGTGAGCTGCCATGTGGGTGCTGGGACTTGAACCTGGGTATCTCGCCCACCCGGTaGTGGGACACAGGCCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: TIIEGCELPCGCWDLNLGISPTR*WDTGPT Trigger: AGTAGGGCCTGTGTCCCATCACCGGGTGGGCGAGAT...ACCCAGGTTCAAGTCCCAGCACCCACATGGCAGCTCACAACCTTCTATAATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR GCA 90 bp | AGAGATGAGAGGCACGGAGGCTCTGGCACAGTGTCCCTAGGCAGCAGCCCTGCCTCCTTCTCCTTCATGTaGAAGAAGACGATGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDERHGGSGTVSLGSSPASFSFM*KKTMLK Trigger: CTTCAGCATCGTCTTCTTGCACATGAAGGAGAAGGA...GGCAGGGCTGCTGCCTAGGGACACTGTGCCAGAGCCTCCGTGCCTCTCATCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CCA 90 bp | GGCATCAGATCTCCTCAGACTACCATTATAGAAGGTTGTGAGCTGCCATGTGGGTCTGCGCACCGGGTGTaGCCTTCTGCACTGCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GIRSPQTTIIEGCELPCGSAHRV*PSALPS Trigger: ACTCGGCAGTGCAGAAGGCCACACCCGGTGCGCAGA...CCCACATGGCAGCTCACAACCTTCTATAATGGTAGTCTGAGGAGATCTGATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR TCA 90 bp | ACCATTATAGAAGGTTGTGAGCTGCCATGTGGGTGCTGGGACTTGAACCTGGGTGATAGGCCGAGGGGATaGAGCGCTCATACTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TIIEGCELPCGCWDLNLGDRPRG*SAHTAC Trigger: ACACGCAGTATGAGCGCTTCATCCCCTCGGCCTATC...ACCCAGGTTCAAGTCCCAGCACCCACATGGCAGCTCACAACCTTCTATAATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR GCA 90 bp | TTACAAAACAAAACAGAACCCGACCGATCCATTCGTGATGGCCTCGGCCGTACTCGGAAGAACAGCGAGTaGGTGTCCCGCACGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQNKTEPDRSIRDGLGRTRKNSE*VSRTFR Trigger: CCTGAACGTGCGGGACACGCACTCGCTGTTCTTCCG...AGTACGGCCGAGGCCATCACGAATGGATCGGTCGGGTTCTGTTTTGTTTTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR GCA 90 bp | ACGATGTATCACTTAAATACCTGGTCTCCTGGGAGGCCACAAAAGGGCATCAGACCCGGTCCTTCAGGCTaGGGAAGAACAGCGAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TMYHLNTWSPGRPQKGIRPGPSG*GRTASA Trigger: CGCACTCGCTGTTCTTCCGCAGCCTGAAGGACCGGG...TCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTATTTAAGTGATACATCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR TCA 90 bp | CCACAAAAGGGCATCAGATCTCCTCAGACTACCATTATAGAAGGTTGTGAGCTGGGACACCCTCCTCCTTaGACACCCAGCGTGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQKGIRSPQTTIIEGCELGHPPP*TPSVRG Trigger: CCCTCTCACGCTGGGTGTTCAAGGAGGAGGGTGTCC...CAGCTCACAACCTTCTATAATGGTAGTCTGAGGAGATCTGATGCCCTTTTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR GCA 90 bp | TTAAATACCTGGTCTCCTGGGAGGCCACAAAAGGGCATCAGATCTCCTCAGACTCAATCCCACACTCACTaGCCAGCTCCCGAAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNTWSPGRPQKGIRSPQTQSHTH*PAPEEG Trigger: ACCCTCTTCGGGAGCTGGGCAGTGAGTGTGGGATTG...AGTCTGAGGAGATCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTATTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR GCA 90 bp | ACCATTATAGAAGGTTGTGAGCTGCCATGTGGGTGCTGGGACTTGAACCTGGGTATGAAGCGCTCATACTaGGTGTGCTGGAGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TIIEGCELPCGCWDLNLGMKRSY*VCWSGL Trigger: GAGGCCACTCCAGCACACGCAGTATGAGCGCTTCAT...ACCCAGGTTCAAGTCCCAGCACCCACATGGCAGCTCACAACCTTCTATAATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CCA 90 bp | ACGATGTATCACTTAAATACCTGGTCTCCTGGGAGGCCACAAAAGGGCATCAGAAGTGTAGGCATTGGGTaGAGCCATCTCGCCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: TMYHLNTWSPGRPQKGIRSVGIG*SHLAHP Trigger: CGGGTGGGCGAGATGGCTCCACCCAATGCCTACACT...TCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTATTTAAGTGATACATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CCA 90 bp | CTTAGGCCAGCTGTCAGTCTAGTTTCCACTACACTGTGGGTGTGTGATCCCCACTCATGGAGAAGGCACTaGCATAGTAGGGATAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRPAVSLVSTTLWVCDPHSWRRH*HSRDRP Trigger: CGGCCTATCCCTACTATGCCAGTGCCTTCTCCATGA...GTGGGGATCACACACCCACAGTGTAGTGGAAACTAGACTGACAGCTGGCCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR TCA 90 bp | GGCATCAGATCTCCTCAGACTACCATTATAGAAGGTTGTGAGCTGCCATGTGGGCAGTGTCAGCCACAATaGGTGTGTGCTGGCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIRSPQTTIIEGCELPCGQCQPQ*VCAGQG Trigger: ACCTTGGCCAGCACACACTCATTGTGGCTGACACTG...CCCACATGGCAGCTCACAACCTTCTATAATGGTAGTCTGAGGAGATCTGATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR TCA 90 bp | TACAAAACAAAACAGAACCCGACCGATCCATTCGTGATGGCCTCGGCCGTACTGCGCACGAACTCCAGCTaGATGTCATCACCATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YKTKQNPTDPFVMASAVLRTNSS*MSSPSK Trigger: CTTTGATGGTGATGACATTCAGCTGGAGTTCGTGCG...CAGTACGGCCGAGGCCATCACGAATGGATCGGTCGGGTTCTGTTTTGTTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR GCA 90 bp | ACCATTATAGAAGGTTGTGAGCTGCCATGTGGGTGCTGGGACTTGAACCTGGGTCAAAGGGGACCCACTTaGCATTGGAGAGCTGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TIIEGCELPCGCWDLNLGQRGPT*HWRAVL Trigger: TAGAACAGCTCTCCAATGGCAAGTGGGTCCCCTTTG...ACCCAGGTTCAAGTCCCAGCACCCACATGGCAGCTCACAACCTTCTATAATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR GCA 90 bp | CTTAACCTAGTCATCTTTCCAGTCCCTCTCGGGTCTCTTCAGCAGCAATTCTTACGCTCATACTGCGTGTaGTGGAGTGGCCTCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNLVIFPVPLGSLQQQFLRSYCV*WSGLTD Trigger: GTCAGTGAGGCCACTCCAGCACACGCAGTATGAGCG...TAAGAATTGCTGCTGAAGAGACCCGAGAGGGACTGGAAAGATGACTAGGTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CCA 90 bp | GGCATCAGATCTCCTCAGACTACCATTATAGAAGGTTGTGAGCTGCCATGTGGGATGACTTGCCAACAATaGTCGGGGCCTTCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIRSPQTTIIEGCELPCGMTCQQ*SGPSAG Trigger: ACCTGCTGAAGGCCCCGACCATTGTTGGCAAGTCAT...CCCACATGGCAGCTCACAACCTTCTATAATGGTAGTCTGAGGAGATCTGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CCA 90 bp | ACCATTATAGAAGGTTGTGAGCTGCCATGTGGGTGCTGGGACTTGAACCTGGGTTCAGGCAGCTTGAACTaGACACTGTACTTGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TIIEGCELPCGCWDLNLGSGSLN*TLYLPP Trigger: AGGTGGCAAGTACAGTGTCCAGTTCAAGCTGCCTGA...ACCCAGGTTCAAGTCCCAGCACCCACATGGCAGCTCACAACCTTCTATAATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CCA 90 bp | ACGATGTATCACTTAAATACCTGGTCTCCTGGGAGGCCACAAAAGGGCATCAGATCATACTGCGTGTGCTaGAGTGGCCTCACTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: TMYHLNTWSPGRPQKGIRSYCVC*SGLTDT Trigger: GGTGTCAGTGAGGCCACTCCAGCACACGCAGTATGA...TCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTATTTAAGTGATACATCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR TCA 90 bp | TTACAAAACAAAACAGAACCCGACCGATCCATTCGTGATGGCCTCGGCCGTACTAATGGGGTTCAGAGATaGCTTGCCAACAATGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LQNKTEPDRSIRDGLGRTNGVQR*LANNGR Trigger: CCGACCATTGTTGGCAAGTCATCTCTGAACCCCATT...AGTACGGCCGAGGCCATCACGAATGGATCGGTCGGGTTCTGTTTTGTTTTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR GCA 90 bp | ACGATGTATCACTTAAATACCTGGTCTCCTGGGAGGCCACAAAAGGGCATCAGATGTGGCCTTCTGCACTaGCGAGTTGAAGAAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TMYHLNTWSPGRPQKGIRCGLLH*RVEEGI Trigger: GATGCCTTCTTCAACTCGGCAGTGCAGAAGGCCACA...TCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTATTTAAGTGATACATCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CCA 90 bp | GGGCGGCTGCACATACAAAAATTGCCACAGAGTGATTCAAACTTGGAAAACTTAGCGTTGTTCCTGGCCTaGAGCCCGGCAATCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRLHIQKLPQSDSNLENLALFLA*SPAISR Trigger: TCTGCTGATTGCCGGGCTCCAGGCCAGGAACAACGC...TAAGTTTTCCAAGTTTGAATCACTCTGTGGCAATTTTTGTATGTGCAGCCGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR GCA 90 bp | GGGCGGCTGCACATACAAAAATTGCCACAGAGTGATTCAAACTTGGAAAACTTACCGGGTGTGGCCTTCTaGACTGCCGAGTTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRLHIQKLPQSDSNLENLPGVAF*TAELKK Trigger: CTTCTTCAACTCGGCAGTGCAGAAGGCCACACCCGG...TAAGTTTTCCAAGTTTGAATCACTCTGTGGCAATTTTTGTATGTGCAGCCGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR GCA 90 bp | GGCATCAGATCTCCTCAGACTACCATTATAGAAGGTTGTGAGCTGCCATGTGGGACTGGACACTGTACTTaGCACCTTTCCTCTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GIRSPQTTIIEGCELPCGTGHCT*HLSSSG Trigger: TCCTGAAGAGGAAAGGTGGCAAGTACAGTGTCCAGT...CCCACATGGCAGCTCACAACCTTCTATAATGGTAGTCTGAGGAGATCTGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CCA 90 bp | CCACAAAAGGGCATCAGATCTCCTCAGACTACCATTATAGAAGGTTGTGAGCTGTCACTGACACCTGGGTaGAAGAGTACAGGTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQKGIRSPQTTIIEGCELSLTPG*KSTGGC Trigger: ACACCCACCTGTACTCTTCCACCCAGGTGTCAGTGA...CAGCTCACAACCTTCTATAATGGTAGTCTGAGGAGATCTGATGCCCTTTTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CCA 90 bp | GGGCGGCTGCACATACAAAAATTGCCACAGAGTGATTCAAACTTGGAAAACTTAGGCCTCACTGACACCTaGGTGGAAGAGTACAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLHIQKLPQSDSNLENLGLTDT*VEEYRW Trigger: CCACCTGTACTCTTCCACCCAGGTGTCAGTGAGGCC...TAAGTTTTCCAAGTTTGAATCACTCTGTGGCAATTTTTGTATGTGCAGCCGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CCA 90 bp | AATGGGGGCGGCTGCACATACAAAAATTGCCACAGAGTGATTCAAACTTGGAAACACCAATATCAGAGCTaGCAGCCACCAAAACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NGGGCTYKNCHRVIQTWKHQYQS*QPPKRC Trigger: GCAGCGTTTTGGTGGCTGCCAGCTCTGATATTGGTG...TTTCCAAGTTTGAATCACTCTGTGGCAATTTTTGTATGTGCAGCCGCCCCCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CCA 90 bp | TTACAAAACAAAACAGAACCCGACCGATCCATTCGTGATGGCCTCGGCCGTACTACAATGAGTGTGTGCTaGCCAAGGTCAGAAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: LQNKTEPDRSIRDGLGRTTMSVC*PRSETS Trigger: TGATGTTTCTGACCTTGGCCAGCACACACTCATTGT...AGTACGGCCGAGGCCATCACGAATGGATCGGTCGGGTTCTGTTTTGTTTTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR GCA 90 bp | GGTGAGGGCAGTGGTTCTCTTTATTTTAGAAATGGGGGCGGCTGCACATACAAACAGCTAGTTCATAGTTaGCTGTCTGAGAATACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GEGSGSLYFRNGGGCTYKQLVHS*LSENTS Trigger: AGAGGTATTCTCAGACAGGCAACTATGAACTAGCTG...TTTGTATGTGCAGCCGCCCCCATTTCTAAAATAAAGAGAACCACTGCCCTCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR TCA 90 bp | AATGGGGGCGGCTGCACATACAAAAATTGCCACAGAGTGATTCAAACTTGGAAAAGTTGTGGTGGTCGATaGCAGCTGTTTTCTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NGGGCTYKNCHRVIQTWKSCGGR*QLFSLH Trigger: ATGAAGAGAAAACAGCTGTCATCGACCACCACAACT...TTTCCAAGTTTGAATCACTCTGTGGCAATTTTTGTATGTGCAGCCGCCCCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CCA 90 bp | CCCGCACGTTCAGGTTGTCCAGCAGCACGAGGGTGCGGGGGCCGCTaGCGCAGACGCAGCCGAGCACGGCCAGCAGCAGCCCGCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PARSGCPAARGCGGR*RRRSRARPAAARRG Trigger: CCCTCTGCGGGCTGCTGCTGGCCGTGCTCGGCTGCGTCTGCGCCAGCGGCCCCCGCACCCTCGTGCTGCTGGACAACCTGAACGTGCGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CCA 90 bp | AAATCCAGAGAGCCACTGAAGATGACCCGGGCGTTGTTCCTGGCCTaGAGCCCGGCAATCAGCAGAGTGTTCCTCCCCACCGCATGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSREPLKMTRALFLA*SPAISRVFLPTAWG Trigger: CCCCCATGCGGTGGGGAGGAACACTCTGCTGATTGCCGGGCTCCAGGCCAGGAACAACGCCCGGGTCATCTTCAGTGGCTCTCTGGATTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS TCA 90 bp | CCCGGTGATGGGACACAGGCCCTACTCGAAGGACACCCTCCTCCTTaGACACCCAGCGTGAGAGGGCCACAGCTAGTTCATAGTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGDGTQALLEGHPPP*TPSVRGPQLVHSCL Trigger: CAGGCAACTATGAACTAGCTGTGGCCCTCTCACGCTGGGTGTTCAAGGAGGAGGGTGTCCTTCGAGTAGGGCCTGTGTCCCATCACCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CCA 90 bp | GATGATGCTATACTCCACCAAGTCGGTGACAGTGTAGGCATTGGGTaGAGCCATCTCGCCCACCCGGTGATGGGACACAGGCCCTACTCG | + |
|
Preference number: 5 (lower is better) Translates to: DDAILHQVGDSVGIG*SHLAHPVMGHRPYS Trigger: CGAGTAGGGCCTGTGTCCCATCACCGGGTGGGCGAGATGGCTCCACCCAATGCCTACACTGTCACCGACTTGGTGGAGTATAGCATCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS TCA 90 bp | CCATCATGGAGAAGGCACTGGCATAGTAGGGATAGGCCGAGGGGATaGAGCGCTCATACTGCGTGTGCTGGAGTGGCCTCACTGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: PSWRRHWHSRDRPRG*SAHTACAGVASLTP Trigger: AGGTGTCAGTGAGGCCACTCCAGCACACGCAGTATGAGCGCTTCATCCCCTCGGCCTATCCCTACTATGCCAGTGCCTTCTCCATGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS GCA 90 bp | GCCTGTCTGAGAATACCTCTGCGCACCGGGTGTGGCCTTCTGCACTaGCGAGTTGAAGAAGGCATCGCTGAAGAAATCCAGAGAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: ACLRIPLRTGCGLLH*RVEEGIAEEIQRAT Trigger: AGTGGCTCTCTGGATTTCTTCAGCGATGCCTTCTTCAACTCGGCAGTGCAGAAGGCCACACCCGGTGCGCAGAGGTATTCTCAGACAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS TCA 90 bp | TTCAGGAAGGTCCTCACGAAGGGGTCGATGCGCACGAACTCCAGCTaGATGTCATCACCATCAAAGGGGACCCACTTGCCATTGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRKVLTKGSMRTNSS*MSSPSKGTHLPLES Trigger: GCTCTCCAATGGCAAGTGGGTCCCCTTTGATGGTGATGACATTCAGCTGGAGTTCGTGCGCATCGACCCCTTCGTGAGGACCTTCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS GCA 90 bp | ACTTGCCACCTTTCCTCTTCAGGAAGGTCCTCACGAAGGGGTCGATaGGCACGAACTCCAGCTGAATGTCATCACCATCAAAGGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: TCHLSSSGRSSRRGR*ARTPAECHHHQRGP Trigger: GGGTCCCCTTTGATGGTGATGACATTCAGCTGGAGTTCGTGCGCATCGACCCCTTCGTGAGGACCTTCCTGAAGAGGAAAGGTGGCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CCA 90 bp | AGGGATTGTCCGGGTCTGCCACCATTCCAACTCCTCGGAAGAGAATaGGGTTCAGAGATGACTTGCCAACAATGGTCGGGGCCTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RDCPGLPPFQLLGRE*GSEMTCQQWSGPSA Trigger: TGCTGAAGGCCCCGACCATTGTTGGCAAGTCATCTCTGAACCCCATTCTCTTCCGAGGAGTTGGAATGGTGGCAGACCCGGACAATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS TCA 90 bp | GTCTGCCACCATTCCAACTCCTCGGAAGAGAATGGGGTTCAGAGATaGCTTGCCAACAATGGTCGGGGCCTTCAGCAGGTTCTCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VCHHSNSSEENGVQR*LANNGRGLQQVLSV Trigger: GACACTGAGAACCTGCTGAAGGCCCCGACCATTGTTGGCAAGTCATCTCTGAACCCCATTCTCTTCCGAGGAGTTGGAATGGTGGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CAA 90 bp | TCCTCGCCCTCTGAGGTAAGGCTGTGCCATTTTCCCATGGCCTTTACAAAACAAGGGTCATCTGCGGTCTaGAAGGTGAGCTCAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSEVRLCHFPMAFTKQGSSAV*KVSSKP Trigger: GGGCTTTGAGCTCACCTTCAAGACCGCAGATGACCC...TTGTTTTGTAAAGGCCATGGGAAAATGGCACAGCCTTACCTCAGAGGGCGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CAA 90 bp | ATACCTGGTCTCCTGGGAGGCCACAAAAGGGCATCAGATCTCCTCAGACTACCATCAAAGGGGACCCACTaGCCATTGGAGAGCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IPGLLGGHKRASDLLRLPSKGTH*PLESCS Trigger: AGAACAGCTCTCCAATGGCAAGTGGGTCCCCTTTGA...TGGTAGTCTGAGGAGATCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CAA 90 bp | GGGCGGCTGCACATACAAAAATTGCCACAGAGTGATTCAAACTTGGAAAACTTAAAGATGACCCGGGCGTaGTTCCTGGCCTGGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRLHIQKLPQSDSNLENLKMTRA*FLAWSP Trigger: CGGGCTCCAGGCCAGGAACAACGCCCGGGTCATCTT...TAAGTTTTCCAAGTTTGAATCACTCTGTGGCAATTTTTGTATGTGCAGCCGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CAA 90 bp | TACAAAACAAAACAGAACCCGACCGATCCATTCGTGATGGCCTCGGCCGTACTGTTCTGCACTGCCGAGTaGAAGAAGGCATCGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YKTKQNPTDPFVMASAVLFCTAE*KKASLK Trigger: CTTCAGCGATGCCTTCTTCAACTCGGCAGTGCAGAA...CAGTACGGCCGAGGCCATCACGAATGGATCGGTCGGGTTCTGTTTTGTTTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CAA 90 bp | ACGATGTATCACTTAAATACCTGGTCTCCTGGGAGGCCACAAAAGGGCATCAGAGTCTCCACGTTGATGTaGCCTCCAAAATCTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TMYHLNTWSPGRPQKGIRVSTLM*PPKSST Trigger: GGTGGAAGATTTTGGAGGCAACATCAACGTGGAGAC...TCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTATTTAAGTGATACATCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CAA 90 bp | TTACAAAACAAAACAGAACCCGACCGATCCATTCGTGATGGCCTCGGCCGTACTCTGATGGTCTCCACGTaGATGTTGCCTCCAAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: LQNKTEPDRSIRDGLGRTLMVST*MLPPKS Trigger: AGATTTTGGAGGCAACATCAACGTGGAGACCATCAG...AGTACGGCCGAGGCCATCACGAATGGATCGGTCGGGTTCTGTTTTGTTTTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS-3UTR CAA 90 bp | ACGATGTATCACTTAAATACCTGGTCTCCTGGGAGGCCACAAAAGGGCATCAGAAACTGGACACTGTACTaGCCACCTTTCCTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TMYHLNTWSPGRPQKGIRNWTLY*PPFLFR Trigger: CCTGAAGAGGAAAGGTGGCAAGTACAGTGTCCAGTT...TCTGATGCCCTTTTGTGGCCTCCCAGGAGACCAGGTATTTAAGTGATACATCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS TCA 90 bp | GTGTGTGCTGGCCAAGGTCAGAAACATCATAGTTGTGGTGGTCGATaGCAGCTGTTTTCTCTTCATCAAATTCAATCCCACACTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VCAGQGQKHHSCGGR*QLFSLHQIQSHTHC Trigger: GCAGTGAGTGTGGGATTGAATTTGATGAAGAGAAAACAGCTGTCATCGACCACCACAACTATGATGTTTCTGACCTTGGCCAGCACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CCA 72 bp | TCAGGTTGTCCAGCAGCACGAGGGTGCGGGGGCCGCTaGCGCAGACGCAGCCGAGCACGGCCAGCAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGCPAARGCGGR*RRRSRARPAAA Trigger: GGCTGCTGCTGGCCGTGCTCGGCTGCGTCTGCGCCAGCGGCCCCCGCACCCTCGTGCTGCTGGACAACCTGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CAA 90 bp | TTCAGGCTGCGGAAGAACAGCGAGTGCGTGTCCCGCACGTTCAGGTaGTCCAGCAGCACGAGGGTGCGGGGGCCGCTGGCGCAGACGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FRLRKNSECVSRTFR*SSSTRVRGPLAQTQ Trigger: CTGCGTCTGCGCCAGCGGCCCCCGCACCCTCGTGCTGCTGGACAACCTGAACGTGCGGGACACGCACTCGCTGTTCTTCCGCAGCCTGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CCA 72 bp | GAGCCACTGAAGATGACCCGGGCGTTGTTCCTGGCCTaGAGCCCGGCAATCAGCAGAGTGTTCCTCCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: EPLKMTRALFLA*SPAISRVFLPT Trigger: GGTGGGGAGGAACACTCTGCTGATTGCCGGGCTCCAGGCCAGGAACAACGCCCGGGTCATCTTCAGTGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CAA 90 bp | GCATCGCTGAAGAAATCCAGAGAGCCACTGAAGATGACCCGGGCGTaGTTCCTGGCCTGGAGCCCGGCAATCAGCAGAGTGTTCCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASLKKSREPLKMTRA*FLAWSPAISRVFLP Trigger: GGGGAGGAACACTCTGCTGATTGCCGGGCTCCAGGCCAGGAACAACGCCCGGGTCATCTTCAGTGGCTCTCTGGATTTCTTCAGCGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS TCA 72 bp | GGGACACAGGCCCTACTCGAAGGACACCCTCCTCCTTaGACACCCAGCGTGAGAGGGCCACAGCTAGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GTQALLEGHPPP*TPSVRGPQLVH Trigger: ATGAACTAGCTGTGGCCCTCTCACGCTGGGTGTTCAAGGAGGAGGGTGTCCTTCGAGTAGGGCCTGTGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CCA 72 bp | ATACTCCACCAAGTCGGTGACAGTGTAGGCATTGGGTaGAGCCATCTCGCCCACCCGGTGATGGGACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: ILHQVGDSVGIG*SHLAHPVMGHR Trigger: CCTGTGTCCCATCACCGGGTGGGCGAGATGGCTCCACCCAATGCCTACACTGTCACCGACTTGGTGGAGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS TCA 72 bp | AGAAGGCACTGGCATAGTAGGGATAGGCCGAGGGGATaGAGCGCTCATACTGCGTGTGCTGGAGTGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRHWHSRDRPRG*SAHTACAGVAS Trigger: TGAGGCCACTCCAGCACACGCAGTATGAGCGCTTCATCCCCTCGGCCTATCCCTACTATGCCAGTGCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS GCA 72 bp | ACACCCAGCGTGAGAGGGCCACAGCTAGTTCATAGTTaGCTGTCTGAGAATACCTCTGCGCACCGGGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TPSVRGPQLVHS*LSENTSAHRVW Trigger: CCACACCCGGTGCGCAGAGGTATTCTCAGACAGGCAACTATGAACTAGCTGTGGCCCTCTCACGCTGGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CAA 72 bp | AAGAAATCCAGAGAGCCACTGAAGATGACCCGGGCGTaGTTCCTGGCCTGGAGCCCGGCAATCAGCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: KKSREPLKMTRA*FLAWSPAISRV Trigger: CACTCTGCTGATTGCCGGGCTCCAGGCCAGGAACAACGCCCGGGTCATCTTCAGTGGCTCTCTGGATTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CAA 72 bp | CTCTGCGCACCGGGTGTGGCCTTCTGCACTGCCGAGTaGAAGAAGGCATCGCTGAAGAAATCCAGAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LCAPGVAFCTAE*KKASLKKSREP Trigger: TGGCTCTCTGGATTTCTTCAGCGATGCCTTCTTCAACTCGGCAGTGCAGAAGGCCACACCCGGTGCGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS TCA 72 bp | GTCCTCACGAAGGGGTCGATGCGCACGAACTCCAGCTaGATGTCATCACCATCAAAGGGGACCCACTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLTKGSMRTNSS*MSSPSKGTHLP Trigger: TGGCAAGTGGGTCCCCTTTGATGGTGATGACATTCAGCTGGAGTTCGTGCGCATCGACCCCTTCGTGAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CCA 72 bp | CCGGGTCTGCCACCATTCCAACTCCTCGGAAGAGAATaGGGTTCAGAGATGACTTGCCAACAATGGTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGLPPFQLLGRE*GSEMTCQQWSG Trigger: CCCCGACCATTGTTGGCAAGTCATCTCTGAACCCCATTCTCTTCCGAGGAGTTGGAATGGTGGCAGACCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CCA 72 bp | AGCCCGGCAATCAGCAGAGTGTTCCTCCCCACCGCATaGGGGTACTGGGTGATTGGTTTATCTGGGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SPAISRVFLPTA*GYWVIGLSGKK Trigger: CTTCTTCCCAGATAAACCAATCACCCAGTACCCCCATGCGGTGGGGAGGAACACTCTGCTGATTGCCGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CAA 90 bp | GCCACCATTCCAACTCCTCGGAAGAGAATGGGGTTCAGAGATGACTaGCCAACAATGGTCGGGGCCTTCAGCAGGTTCTCAGTGTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ATIPTPRKRMGFRDD*PTMVGAFSRFSVSA Trigger: GGCTGACACTGAGAACCTGCTGAAGGCCCCGACCATTGTTGGCAAGTCATCTCTGAACCCCATTCTCTTCCGAGGAGTTGGAATGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS GCA 72 bp | AGAATACCTCTGCGCACCGGGTGTGGCCTTCTGCACTaGCGAGTTGAAGAAGGCATCGCTGAAGAAATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RIPLRTGCGLLH*RVEEGIAEEIQ Trigger: CTGGATTTCTTCAGCGATGCCTTCTTCAACTCGGCAGTGCAGAAGGCCACACCCGGTGCGCAGAGGTATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CCA 72 bp | GGAAGAGAATGGGGTTCAGAGATGACTTGCCAACAATaGTCGGGGCCTTCAGCAGGTTCTCAGTGTCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GREWGSEMTCQQ*SGPSAGSQCQP Trigger: TGGCTGACACTGAGAACCTGCTGAAGGCCCCGACCATTGTTGGCAAGTCATCTCTGAACCCCATTCTCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CAA 72 bp | CCGCCACCATCAATGAAGGCACTGATGGTCTCCACGTaGATGTTGCCTCCAAAATCTTCCACCGACGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PPPSMKALMVST*MLPPKSSTDGE Trigger: TTCCCCGTCGGTGGAAGATTTTGGAGGCAACATCAACGTGGAGACCATCAGTGCCTTCATTGATGGTGGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CAA 72 bp | CCAACTCCTCGGAAGAGAATGGGGTTCAGAGATGACTaGCCAACAATGGTCGGGGCCTTCAGCAGGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PTPRKRMGFRDD*PTMVGAFSRFS Trigger: TGAGAACCTGCTGAAGGCCCCGACCATTGTTGGCAAGTCATCTCTGAACCCCATTCTCTTCCGAGGAGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS TCA 72 bp | CATTCCAACTCCTCGGAAGAGAATGGGGTTCAGAGATaGCTTGCCAACAATGGTCGGGGCCTTCAGCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: HSNSSEENGVQR*LANNGRGLQQV Trigger: AACCTGCTGAAGGCCCCGACCATTGTTGGCAAGTCATCTCTGAACCCCATTCTCTTCCGAGGAGTTGGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS GCA 72 bp | CTTTCCTCTTCAGGAAGGTCCTCACGAAGGGGTCGATaGGCACGAACTCCAGCTGAATGTCATCACCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: LSSSGRSSRRGR*ARTPAECHHHQ Trigger: TTGATGGTGATGACATTCAGCTGGAGTTCGTGCGCATCGACCCCTTCGTGAGGACCTTCCTGAAGAGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CAA 72 bp | GTTGAAGAGCCTGTTAGGATGTCCAAAACCAAGGGATaGTCCGGGTCTGCCACCATTCCAACTCCTCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VEEPVRMSKTKG*SGSATIPTPRK Trigger: CTTCCGAGGAGTTGGAATGGTGGCAGACCCGGACAATCCCTTGGTTTTGGACATCCTAACAGGCTCTTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||
| CDS CAA 72 bp | ACTTTAAACTGGAATACACCATACACGTCAGGCAGCTaGAACTGGACACTGTACTTGCCACCTTTCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TLNWNTPYTSGS*NWTLYLPPFLF Trigger: GAAGAGGAAAGGTGGCAAGTACAGTGTCCAGTTCAAGCTGCCTGACGTGTATGGTGTATTCCAGTTTAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030538.5 |
||