Pregenerated sensors for DDO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063428Ensembl transcript IDs: ENSMUST00000019977.8, ENSMUST00000213442.2, ENSMUST00000213503.2, ENSMUST00000213856.2, ENSMUST00000214102.2, ENSMUST00000216830.2
Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCATGCCCAGCCGGCTTCTCAGGTGTAGTCTCCCCTCCCCCAGCCTaGAACCTGCTTGCTCAGGGATGGAGCTTCCCGCTCAATCTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: PCPAGFSGVVSPPPA*NLLAQGWSFPLNLS Trigger: AGAAAGATTGAGCGGGAAGCTCCATCCCTGAGCAAGCAGGTTTCAGGCTGGGGGAGGGGAGACTACACCTGAGAAGCCGGCTGGGCATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR GCA 90 bp | CGGCTTCTCAGGTGTAGTCTCCCCTCCCCCAGCCTGAAACCTGCTTaGTCAGGGATGGAGCTTCCCGCTCAATCTTTCTGCCACGCCTAC | + |
|
Preference number: 1 (lower is better) Translates to: RLLRCSLPSPSLKPA*SGMELPAQSFCHAY Trigger: GTAGGCGTGGCAGAAAGATTGAGCGGGAAGCTCCATCCCTGAGCAAGCAGGTTTCAGGCTGGGGGAGGGGAGACTACACCTGAGAAGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR CCA 90 bp | CGGAGAACCTCGTGGGCTTCCAGCATCCACCTGGGACTACTGATGTaGACTGGGCAGCTACAGGCGTCGCTCCCAGTAAGAGATCGAGGA | + |
|
Preference number: 1 (lower is better) Translates to: RRTSWASSIHLGLLM*TGQLQASLPVRDRG Trigger: TCCTCGATCTCTTACTGGGAGCGACGCCTGTAGCTGCCCAGTCCACATCAGTAGTCCCAGGTGGATGCTGGAAGCCCACGAGGTTCTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CCA 90 bp | CGGTGCATCCTACCTCAGAGGATGAGAGCATCCATCCCAATAGAATaGAGGAGGCTGGAGGCCGAGCAAGGCTGCCTGGAATTGGGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: RCILPQRMRASIPIE*RRLEAEQGCLELGL Trigger: GAGCCCCAATTCCAGGCAGCCTTGCTCGGCCTCCAGCCTCCTCCATTCTATTGGGATGGATGCTCTCATCCTCTGAGGTAGGATGCACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR CCA 90 bp | AAGCTTTCATGGGAGAATGGGGACCAGTGCTCTCGGAGAACCTCGTaGGCTTCCAGCATCCACCTGGGACTACTGATGTGGACTGGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: KLSWENGDQCSRRTS*ASSIHLGLLMWTGQ Trigger: CTGCCCAGTCCACATCAGTAGTCCCAGGTGGATGCTGGAAGCCCACGAGGTTCTCCGAGAGCACTGGTCCCCATTCTCCCATGAAAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR GCA 90 bp | AGCACAGCCAGCATTTCCAAGCTTTCATGGGAGAATGGGGACCAGTaGTCTCGGAGAACCTCGTGGGCTTCCAGCATCCACCTGGGACTA | + |
|
Preference number: 1 (lower is better) Translates to: STASISKLSWENGDQ*SRRTSWASSIHLGL Trigger: TAGTCCCAGGTGGATGCTGGAAGCCCACGAGGTTCTCCGAGAGCACTGGTCCCCATTCTCCCATGAAAGCTTGGAAATGCTGGCTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR TCA 90 bp | AGAAAAGACTGCGGCTGGACACAGCGTGGTACCCAGACCACACCCTaGCCGGAGCGCTTCAGTGACACATACCTCTCCCCTCTCTTTAAA | + |
|
Preference number: 1 (lower is better) Translates to: RKDCGWTQRGTQTTP*PERFSDTYLSPLFK Trigger: TTTAAAGAGAGGGGAGAGGTATGTGTCACTGAAGCGCTCCGGTCAGGGTGTGGTCTGGGTACCACGCTGTGTCCAGCCGCAGTCTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR GCA 90 bp | ACCCAGGTTGTGATCTGCTGGCCAGACACAACACTCAGGCAGCGGTaGATCCTACCTCAGAGGATGAGAGCATCCATCCCAATAGAATGG | + |
|
Preference number: 1 (lower is better) Translates to: TQVVICWPDTTLRQR*ILPQRMRASIPIEW Trigger: CCATTCTATTGGGATGGATGCTCTCATCCTCTGAGGTAGGATGCACCGCTGCCTGAGTGTTGTGTCTGGCCAGCAGATCACAACCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR TCA 90 bp | AGAGGTATAGGAGGAAAGTTGGGACGGGGAGTAGACAACTGGGAATaGGCGCTTAGACACTGTCACCCCATCTGCCCTGCTACCTGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: RGIGGKLGRGVDNWE*ALRHCHPICPATCS Trigger: TGAACAGGTAGCAGGGCAGATGGGGTGACAGTGTCTAAGCGCTCATTCCCAGTTGTCTACTCCCCGTCCCAACTTTCCTCCTATACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR TCA 90 bp | TCTTCCAGGTTTCCAAAATGCCTTTCCAGGCTAGAACCCAGGTTGTaGTCTGCTGGCCAGACACAACACTCAGGCAGCGGTGCATCCTAC | + |
|
Preference number: 1 (lower is better) Translates to: SSRFPKCLSRLEPRL*SAGQTQHSGSGASY Trigger: GTAGGATGCACCGCTGCCTGAGTGTTGTGTCTGGCCAGCAGATCACAACCTGGGTTCTAGCCTGGAAAGGCATTTTGGAAACCTGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR GCA 90 bp | CAGAGACAAGGTAAAAGACTTGGGGCTATGTCCCTGAAGACTACTTaGCCAGGACTTCTGCAGCTAGAGGAGAGGAAGGAGGCTGGTACC | + |
|
Preference number: 1 (lower is better) Translates to: QRQGKRLGAMSLKTT*PGLLQLEERKEAGT Trigger: GGTACCAGCCTCCTTCCTCTCCTCTAGCTGCAGAAGTCCTGGGCAAGTAGTCTTCAGGGACATAGCCCCAAGTCTTTTACCTTGTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR CCA 90 bp | GAAACAGCCACACTGAGGATGAAGAGAGAGCTAAGGATGGCCGGGTaGGACTCAAGGACGATGCGAACTTGTGCGAGTTGTGTTAGGACT | + |
|
Preference number: 1 (lower is better) Translates to: ETATLRMKRELRMAG*DSRTMRTCASCVRT Trigger: AGTCCTAACACAACTCGCACAAGTTCGCATCGTCCTTGAGTCCCACCCGGCCATCCTTAGCTCTCTCTTCATCCTCAGTGTGGCTGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR GCA 90 bp | TCTGTTAGGTGTTTGGTCCCAGAAACAACAAAACAGACACAAAGTTaGTCCAAAACTGGCGCAGCCTTCGAGGGCAACTCCACCTCTGTC | + |
|
Preference number: 1 (lower is better) Translates to: SVRCLVPETTKQTQS*SKTGAAFEGNSTSV Trigger: GACAGAGGTGGAGTTGCCCTCGAAGGCTGCGCCAGTTTTGGAGCAACTTTGTGTCTGTTTTGTTGTTTCTGGGACCAAACACCTAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR GCA 90 bp | CAGAACAGTAGAGTAGGCATCTCTATTACAGTTGAACAGGAAATCTaGTTAACCTGGCTGAGAGGCAGTGCCCTCCAGCTGAGAAATAGC | + |
|
Preference number: 1 (lower is better) Translates to: QNSRVGISITVEQEI*LTWLRGSALQLRNS Trigger: GCTATTTCTCAGCTGGAGGGCACTGCCTCTCAGCCAGGTTAAGCAGATTTCCTGTTCAACTGTAATAGAGATGCCTACTCTACTGTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR TCA 90 bp | ATTCAGTCTCCAACAGTGCTCATTCACTGCGCAGTCAGCAGCTCTTaGTCATTTGTGGTAATGAAGTATGCAGCCTCCACGATTGCTATG | + |
|
Preference number: 1 (lower is better) Translates to: IQSPTVLIHCAVSSS*SFVVMKYAASTIAM Trigger: CATAGCAATCGTGGAGGCTGCATACTTCATTACCACAAATGATCAAGAGCTGCTGACTGCGCAGTGAATGAGCACTGTTGGAGACTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR TCA 90 bp | AACAAACTCTTGTCTGCTGGAAGAGCAACAAGCAATCTTAATTGTTaGGCCATCTCTCCAGCCCTGTCCCTATACTTATGGCCAATCGTA | + |
|
Preference number: 1 (lower is better) Translates to: NKLLSAGRATSNLNC*AISPALSLYLWPIV Trigger: TACGATTGGCCATAAGTATAGGGACAGGGCTGGAGAGATGGCTCAACAATTAAGATTGCTTGTTGCTCTTCCAGCAGACAAGAGTTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR TCA 90 bp | AAGCATGCTGCCATGGTAGATGCTGATATTGAAATTTTAAATGACTaGCGTGCCAAGGAGCAAAGAGAGACCAGCGGAAACGATTCTCAC | + |
|
Preference number: 1 (lower is better) Translates to: KHAAMVDADIEILND*RAKEQRETSGNDSH Trigger: GTGAGAATCGTTTCCGCTGGTCTCTCTTTGCTCCTTGGCACGTCAGTCATTTAAAATTTCAATATCAGCATCTACCATGGCAGCATGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CCA 90 bp | GGCTGCAGCTATGAACAATGCTTTAGGTTGTTTCTGTTAGGTGTTTaGTCCCAGAAACAACAAAACAGACACAAAGTTGCTCCAAAACTG | + |
|
Preference number: 1 (lower is better) Translates to: GCSYEQCFRLFLLGV*SQKQQNRHKVAPKL Trigger: CAGTTTTGGAGCAACTTTGTGTCTGTTTTGTTGTTTCTGGGACCAAACACCTAACAGAAACAACCTAAAGCATTGTTCATAGCTGCAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR GCA 90 bp | TATAAACTTTCATTCACACAAGCTGAGAGAGACAGCCTCAAATCCTaGAGTTATTTACTTGAACTGTGTTTGATTCACGACCCTCTCATT | + |
|
Preference number: 1 (lower is better) Translates to: YKLSFTQAERDSLKS*SYLLELCLIHDPLI Trigger: AATGAGAGGGTCGTGAATCAAACACAGTTCAAGTAAATAACTGCAGGATTTGAGGCTGTCTCTCTCAGCTTGTGTGAATGAAAGTTTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CCA 90 bp | ATTAGCATATACTTTGTATTATGGTTGGATTTAATGTCACTTCAGTaGAAAGCCTCACCTGAAGAACTTTCCCGATTGTCTCCACTGATG | + |
|
Preference number: 1 (lower is better) Translates to: ISIYFVLWLDLMSLQ*KASPEELSRLSPLM Trigger: CATCAGTGGAGACAATCGGGAAAGTTCTTCAGGTGAGGCTTTCCACTGAAGTGACATTAAATCCAACCATAATACAAAGTATATGCTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR TCA 90 bp | TTTTTATCGCTAATCTCCATATATATATATATCACTGGAGTGCAGTaGTTTCCAGCCAGAGGTAGCTTTACCTTACAAAGAGACACTTGG | + |
|
Preference number: 1 (lower is better) Translates to: FLSLISIYIYITGVQ*FPARGSFTLQRDTW Trigger: CCAAGTGTCTCTTTGTAAGGTAAAGCTACCTCTGGCTGGAAATCACTGCACTCCAGTGATATATATATATATGGAGATTAGCGATAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CAA 90 bp | TGCCCAGGACTTCTGCAGCTAGAGGAGAGGAAGGAGGCTGGTACCTaGCCCATGCCCAGCCGGCTTCTCAGGTGTAGTCTCCCCTCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: CPGLLQLEERKEAGT*PMPSRLLRCSLPSP Trigger: GGGGGAGGGGAGACTACACCTGAGAAGCCGGCTGGGCATGGGCAAGGTACCAGCCTCCTTCCTCTCCTCTAGCTGCAGAAGTCCTGGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGGGCTATGTCCCTGAAGACTACTTGCCCAGGACTTCTGCAGCTAGAGGAGAGAGGAGGCTGGTACCTTaGCCATGCCCAGCCGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: WGYVPEDYLPRTSAARGERRLVP*PCPAGF Trigger: GAAGCCGGCTGGGCATGGGCAAGGTACCAGCCTCCT...CTCTCCTCTAGCTGCAGAAGTCCTGGGCAAGTAGTCTTCAGGGACATAGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR CAA 90 bp | CCAATAGAATGGAGGAGGCTGGAGGCCGAGCAAGGCTGCCTGGAATaGGGGCTCAGAGCTGAATGTGGAATGGATCCCGGTAGGAGCGAA | + |
|
Preference number: 2 (lower is better) Translates to: PIEWRRLEAEQGCLE*GLRAECGMDPGRSE Trigger: TTCGCTCCTACCGGGATCCATTCCACATTCAGCTCTGAGCCCCAATTCCAGGCAGCCTTGCTCGGCCTCCAGCCTCCTCCATTCTATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR TCA 90 bp | GGACACAGCGTGGTACCCAGACCACACCCTGACCGGAGCGCTTCAGTGACACATGCCTGGCCGACTCCATaGATACACACAAATCACTCC | + |
|
Preference number: 2 (lower is better) Translates to: GHSVVPRPHPDRSASVTHAWPTP*IHTNHS Trigger: GGAGTGATTTGTGTGTATTCATGGAGTCGGCCAGGC...ATGTGTCACTGAAGCGCTCCGGTCAGGGTGTGGTCTGGGTACCACGCTGTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGAGCATTGCTCAGCTACAGTGGCAAGAGCCCCGCCTCAGGGGAGTTCTCGAGATGTAGATCACTGTaGGCTCTCCTCAACCTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: AGALLSYSGKSPASGEFSRCRSL*ALLNLS Trigger: TGAAAGGTTGAGGAGAGCTCACAGTGATCTACATCT...CGAGAACTCCCCTGAGGCGGGGCTCTTGCCACTGTAGCTGAGCAATGCTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAAATCACCAGGGACCTGACAGGACAGACTTGAGGCAGAGCACGCCCGAAGGCTGGCCAAACACATACTaGGGGAACCGCTTCAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: KNHQGPDRTDLRQSTPEGWPNTY*GNRFSS Trigger: TGAGCTGAAGCGGTTCCCTCAGTATGTGTTTGGCCA...GCCTTCGGGCGTGCTCTGCCTCAAGTCTGTCCTGTCAGGTCCCTGGTGATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCATTTCCAAGCTTTCATGGGAGAATGGGGACCAGTGCTCTCGGAGAACCTGCGTGTGCAAGGCCCTaGCGTCCATTCCCAAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: PAFPSFHGRMGTSALGEPACARP*RPFPNS Trigger: TGAGTTTGGGAATGGACGTCAGGGCCTTGCACACGC...AGGTTCTCCGAGAGCACTGGTCCCCATTCTCCCATGAAAGCTTGGAAATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCATTTCCAAGCTTTCATGGGAGAATGGGGACCAGTGCTCTCGGAGAACCTGACACGTTAGACTCATaGTCCCAGGGCTGGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PAFPSFHGRMGTSALGEPDTLDS*SQGWSW Trigger: CCAGCTCCAGCCCTGGGATCATGAGTCTAACGTGTC...AGGTTCTCCGAGAGCACTGGTCCCCATTCTCCCATGAAAGCTTGGAAATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGCCTGAAACCTGCTTGCTCAGGGATGGAGCTTCCCGCTCAATCTTTCTGCAAGGCTGCCTGGAATTaGGGCTCAGAGCTGAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: PSLKPACSGMELPAQSFCKAAWN*GSELNV Trigger: CACATTCAGCTCTGAGCCCCAATTCCAGGCAGCCTT...GCAGAAAGATTGAGCGGGAAGCTCCATCCCTGAGCAAGCAGGTTTCAGGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAGCACGCCCGAAGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTAAATCACCAGGGACCTaGCAGGACAGACTTGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RARPKAKLSGLCHSSSACKSPGT*QDRLEA Trigger: TGCCTCAAGTCTGTCCTGTCAGGTCCCTGGTGATTT...ACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCTTCGGGCGTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213503.2 ENSMUST00000213856.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAGCACGCCCGAAGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTGCCCGAAGACACTTGTaGTTATTGCAGCTGGTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RARPKAKLSGLCHSSSACARRHL*LLQLVG Trigger: CCCTACCAGCTGCAATAATCACAAGTGTCTTCGGGC...ACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCTTCGGGCGTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTCACCGCCACAGCGGGCAAGCAGGCTTTCATTCACGACCTTTGCTTTTCTCATGGCTCTGCCTGCTCTaGTGTGTAAAGCAGAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: GHRHSGQAGFHSRPLLFSWLCLL*CVKQKH Trigger: GTGCTTCTGCTTTACACAGCAGAGCAGGCAGAGCCA...TGAGAAAAGCAAAGGTCGTGAATGAAAGCCTGCTTGCCCGCTGTGGCGGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGCCTGAAACCTGCTTGCTCAGGGATGGAGCTTCCCGCTCAATCTTTCTGCAGGCTGAGTGTCTCCTaGAAAGAGATTCAGGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: PSLKPACSGMELPAQSFCRLSVS*KEIQAV Trigger: GACTGCCTGAATCTCTTTCCAGGAGACACTCAGCCT...GCAGAAAGATTGAGCGGGAAGCTCCATCCCTGAGCAAGCAGGTTTCAGGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATGGATTTGTCTGCTGTAGCACAGCCAGCATTTCCAAGCTTTCATGGGAGATCCCAGGGCTGGAGCTaGAGCTCAGTGGACAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: GMDLSAVAQPAFPSFHGRSQGWS*SSVDKH Trigger: GTGCTTGTCCACTGAGCTCCAGCTCCAGCCCTGGGA...TCTCCCATGAAAGCTTGGAAATGCTGGCTGTGCTACAGCAGACAAATCCATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CAA 90 bp | AGCTCAGATCCAGTGAGGGTATTTCAAAGTCGGTTAATTCTCACCTaGGTTTGCTTGACCCTTCCCTCACTGCTCCTGGGCCGAGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: SSDPVRVFQSRLILT*VCLTLPSLLLGRGM Trigger: CATCCCTCGGCCCAGGAGCAGTGAGGGAAGGGTCAAGCAAACCAAGGTGAGAATTAACCGACTTTGAAATACCCTCACTGGATCTGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTTCCCCAGTTTGCTCTTGGAAGTCCCCAGAACAGTAGAGTAGGCATCTCTGCAGTGCCCTCCAGCTaGGAAATAGCCTTTCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FLPQFALGSPQNSRVGISAVPSS*EIAFLS Trigger: GCTGAGAAAGGCTATTTCTCAGCTGGAGGGCACTGC...AGAGATGCCTACTCTACTGTTCTGGGGACTTCCAAGAGCAAACTGGGGAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCACGCCCGAAGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTGTTGAACAGGAAATCTaGTTAACCTGGCTGAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: RARPKAKLSGLCHSSSACVEQEI*LTWLRG Trigger: GCCTCTCAGCCAGGTTAAGCAGATTTCCTGTTCAAC...ACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCTTCGGGCGTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR CAA 90 bp | ACTGGTCACCGCCACAGCGGGCAAGCAGGCTTTCATTCACGACCTTaGCTTTTCTCAGAGTTGACCAAGTCAAGTTTGTTCCTGGGTATG | + |
|
Preference number: 2 (lower is better) Translates to: TGHRHSGQAGFHSRP*LFSELTKSSLFLGM Trigger: CATACCCAGGAACAAACTTGACTTGGTCAACTCTGAGAAAAGCAAAGGTCGTGAATGAAAGCCTGCTTGCCCGCTGTGGCGGTGACCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CAA 90 bp | CCAGTGAGGGTATTTCAAAGTCGGTTAATTCTCACCTTGGTTTGCTaGACCCTTCCCTCACTGCTCCTGGGCCGAGGGATGGATTTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PVRVFQSRLILTLVC*TLPSLLLGRGMDLS Trigger: AGACAAATCCATCCCTCGGCCCAGGAGCAGTGAGGGAAGGGTCAAGCAAACCAAGGTGAGAATTAACCGACTTTGAAATACCCTCACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCGAGGTGGTCTCATGCTCCCCCTTATCTCATTTTACACTTCTCAATGAAGCGAAATCACCAGGGACCTaGCAGGACAGACTTGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GEVVSCSPLSHFTLLNEAKSPGT*QDRLEA Trigger: TGCCTCAAGTCTGTCCTGTCAGGTCCCTGGTGATTT...CGCTTCATTGAGAAGTGTAAAATGAGATAAGGGGGAGCATGAGACCACCTCGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAGCACGCCCGAAGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTAGATGTAGATCACTGTaGGCTCTCCTCAACCTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RARPKAKLSGLCHSSSACRCRSL*ALLNLS Trigger: TGAAAGGTTGAGGAGAGCTCACAGTGATCTACATCT...ACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCTTCGGGCGTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213503.2 ENSMUST00000213856.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCAGGCAGCGGTGCATCCTACCTCAGAGGATGAGAGCATCCATCCCAATAGAAGTTAGGACTGCTCTCTaGATGTGCACTGTTAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LRQRCILPQRMRASIPIEVRTAL*MCTVSQ Trigger: CTGACTAACAGTGCACATGCAGAGAGCAGTCCTAAC...TTCTATTGGGATGGATGCTCTCATCCTCTGAGGTAGGATGCACCGCTGCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCACGCCCGAAGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTAGAGACACTTGGCAATaGCCGAAGACACTTGTGATT | + |
|
Preference number: 2 (lower is better) Translates to: RARPKAKLSGLCHSSSACRDTWQ*PKTLVI Trigger: AATCACAAGTGTCTTCGGGCATTGCCAAGTGTCTCT...ACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCTTCGGGCGTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CAA 90 bp | AGATCCAGTGAGGGTATTTCAAAGTCGGTTAATTCTCACCTTGGTTaGCTTGACCCTTCCCTCACTGCTCCTGGGCCGAGGGATGGATTT | + |
|
Preference number: 2 (lower is better) Translates to: RSSEGISKSVNSHLG*LDPSLTAPGPRDGF Trigger: AAATCCATCCCTCGGCCCAGGAGCAGTGAGGGAAGGGTCAAGCAAACCAAGGTGAGAATTAACCGACTTTGAAATACCCTCACTGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGGCAGCGGTGCATCCTACCTCAGAGGATGAGAGCATCCATCCCAATAGAAGGTTTCTTCATAGCCTaGCATTGCTCCAGAGTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LRQRCILPQRMRASIPIEGFFIA*HCSRVR Trigger: TCTAACTCTGGAGCAATGTCAGGCTATGAAGAAACC...TTCTATTGGGATGGATGCTCTCATCCTCTGAGGTAGGATGCACCGCTGCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR TCA 90 bp | CGTGCCAAGGAGCAAAGAGAGACCAGCGGAAACGATTCTCACGTTCGTGGATTGAGATGTAGATCACTGTaGGCTCTCCTCAACCTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RAKEQRETSGNDSHVRGLRCRSL*ALLNLS Trigger: TGAAAGGTTGAGGAGAGCTCACAGTGATCTACATCT...CAATCCACGAACGTGAGAATCGTTTCCGCTGGTCTCTCTTTGCTCCTTGGCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGGCCAGAAGAGTATGTTGGAAACCCTGAAGCTGTAGTTACAGGAGGTTGTTCCCTCCTGGCAGCTTaGCAAGATAGGGGATTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: QRPEEYVGNPEAVVTGGCSLLAA*QDRGLL Trigger: AAGCAATCCCCTATCTTGTCAAGCTGCCAGGAGGGA...ACAACCTCCTGTAACTACAGCTTCAGGGTTTCCAACATACTCTTCTGGCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CCA 90 bp | GATTTGTCTGCTGTAGCACAGCCAGCATTTCCAAGCTTTCATGGGAGAATGGGGGGGCAAAAGCCATCTTaGTTTCTCCTCACAGTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: DLSAVAQPAFPSFHGRMGGQKPS*FLLTVS Trigger: GCTTACTGTGAGGAGAAACCAAGATGGCTTTTGCCC...CCCCATTCTCCCATGAAAGCTTGGAAATGCTGGCTGTGCTACAGCAGACAAATC 49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CAA 90 bp | GCTTGCAGGGATGTGCGGGGCCCACAGTATAATTTGTTGCTGACGTaGTTGTCTGTGAATCTAAAGGGACCTTTGCTTCCATTCTGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: ACRDVRGPQYNLLLT*LSVNLKGPLLPFCV Trigger: AACACAGAATGGAAGCAAAGGTCCCTTTAGATTCACAGACAACAACGTCAGCAACAAATTATACTGTGGGCCCCGCACATCCCTGCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCATTTCCAAGCTTTCATGGGAGAATGGGGACCAGTGCTCTCGGAGAACCTCTACATCTTCATTACTaGTCAAAAGACCCATCGACA | + |
|
Preference number: 2 (lower is better) Translates to: PAFPSFHGRMGTSALGEPLHLHY*SKDPST Trigger: TGTCGATGGGTCTTTTGATCAGTAATGAAGATGTAG...AGGTTCTCCGAGAGCACTGGTCCCCATTCTCCCATGAAAGCTTGGAAATGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CAA 90 bp | TGCAGGGATGTGCGGGGCCCACAGTATAATTTGTTGCTGACGTTGTaGTCTGTGAATCTAAAGGGACCTTTGCTTCCATTCTGTGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: CRDVRGPQYNLLLTL*SVNLKGPLLPFCVL Trigger: CAAAACACAGAATGGAAGCAAAGGTCCCTTTAGATTCACAGACAACAACGTCAGCAACAAATTATACTGTGGGCCCCGCACATCCCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTGTAGGCACTTCATGGGCACTAGGAAACAAACTCTTGTCTGCTGGAAGAGCAGCAGTCAGCAGCTCTTaGTCATTTGTGGTAATGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VVGTSWALGNKLLSAGRAAVSSS*SFVVMK Trigger: CTTCATTACCACAAATGATCAAGAGCTGCTGACTGC...TGCTCTTCCAGCAGACAAGAGTTTGTTTCCTAGTGCCCATGAAGTGCCTACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACTTCCCTCCTATACCTTCCACCAATCTTACCATTATGACACATACCAGAAAAAATCACCAGGGACCTaGCAGGACAGACTTGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: ALPSYTFHQSYHYDTYQKKSPGT*QDRLEA Trigger: TGCCTCAAGTCTGTCCTGTCAGGTCCCTGGTGATTT...TTTCTGGTATGTGTCATAATGGTAAGATTGGTGGAAGGTATAGGAGGGAAGTGC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000213503.2 ENSMUST00000216830.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCAAAACATCATTTTTCATAGGACCACCTAGGGAGCACTTCCCTCCTATACCTATAGCCTTTCTCAGCTaGCTCAGTGCCCTTTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TKTSFFIGPPREHFPPIPIAFLS*LSALFW Trigger: CCAGAAAAGGGCACTGAGGCAGCTGAGAAAGGCTAT...AGGTATAGGAGGGAAGTGCTCCCTAGGTGGTCCTATGAAAAATGATGTTTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGATGGATTTGTCTGCTGTAGCACAGCCAGCATTTCCAAGCTTTCATGGGAGATATATATCACTGGAGTaGAGTGATTTCCAGCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GMDLSAVAQPAFPSFHGRYISLE*SDFQPE Trigger: CTCTGGCTGGAAATCACTGCACTCCAGTGATATATA...TCTCCCATGAAAGCTTGGAAATGCTGGCTGTGCTACAGCAGACAAATCCATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CAA 90 bp | AGCGGGCAAGCAGGCTTTCATTCACGACCTTTGCTTTTCTCAGAGTaGACCAAGTCAAGTTTGTTCCTGGGTATGTCTGAAATTTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SGQAGFHSRPLLFSE*TKSSLFLGMSEICR Trigger: TCTGCAAATTTCAGACATACCCAGGAACAAACTTGACTTGGTCAACTCTGAGAAAAGCAAAGGTCGTGAATGAAAGCCTGCTTGCCCGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTCAGATGCTCTGGTTTATTTGAGATTGATACAACATCGCCCCCTGGTGAAGTTGGCTCTATGACCTaGGAGGATCATGCACAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: IFRCSGLFEIDTTSPPGEVGSMT*EDHAQL Trigger: GAGCTGTGCATGATCCTCTCAGGTCATAGAGCCAAC...TTCACCAGGGGGCGATGTTGTATCAATCTCAAATAAACCAGAGCATCTGAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTTCATAGGACCACCTAGGGAGCACTTCCCTCCTATACCTTCCACCAATCTTAGATGTAGATCACTGTaGGCTCTCCTCAACCTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: FFIGPPREHFPPIPSTNLRCRSL*ALLNLS Trigger: TGAAAGGTTGAGGAGAGCTCACAGTGATCTACATCT...AAGATTGGTGGAAGGTATAGGAGGGAAGTGCTCCCTAGGTGGTCCTATGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213503.2 ENSMUST00000216830.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCAAATTACACACAATGTTTAGATACCCTCCCCTTTATGTTTTGCACCCACGTATCACTGGAGTGCAGTaGTTTCCAGCCAGAGGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: SKLHTMFRYPPLYVLHPRITGVQ*FPARGS Trigger: GCTACCTCTGGCTGGAAATCACTGCACTCCAGTGAT...ACGTGGGTGCAAAACATAAAGGGGAGGGTATCTAAACATTGTGTGTAATTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTGTAGGCACTTCATGGGCACTAGGAAACAAACTCTTGTCTGCTGGAAGAGCATTCACACTGCTTTCTTaGAGATGTGAGTTGAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: VVGTSWALGNKLLSAGRAFTLLS*RCELNS Trigger: GCTGTTCAACTCACATCTGCAAGAAAGCAGTGTGAA...TGCTCTTCCAGCAGACAAGAGTTTGTTTCCTAGTGCCCATGAAGTGCCTACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGAGCAACAAGCAATCTTAATTGTTGAGCCATCTCTCCAGCCCTGTCCCTATGCTACCTGTTCACACTaGTTTCTTGCAGATGTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: EEQQAILIVEPSLQPCPYATCSH*FLADVS Trigger: ACTCACATCTGCAAGAAAGCAGTGTGAACAGGTAGC...ATAGGGACAGGGCTGGAGAGATGGCTCAACAATTAAGATTGCTTGTTGCTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGTGGTTCTGGAGGGTGGACTGGATTTTGTTAACAATGTGGCTAGACTGAATATAGGAAAACAGGTTTaGAGTGGAGAGGTGAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: GVVLEGGLDFVNNVARLNIGKQV*SGEVRN Trigger: GTTTCTCACCTCTCCACTTCAAACCTGTTTTCCTAT...ATTCAGTCTAGCCACATTGTTAACAAAATCCAGTCCACCCTCCAGAACCACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCAAACATTCCTTTGAGACAGACTATACCTTATTTTGAGAATGTTACCCAACCAGGAATCTCATGCTaGGAGAGGAAGGCTGAACCC | + |
|
Preference number: 2 (lower is better) Translates to: LANIPLRQTIPYFENVTQPGISC*ERKAEP Trigger: GGGTTCAGCCTTCCTCTCTCAGCATGAGATTCCTGG...TTGGGTAACATTCTCAAAATAAGGTATAGTCTGTCTCAAAGGAATGTTTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCAAACATTCCTTTGAGACAGACTATACCTTATTTTGAGAATGTTACCCAAAGCCTGAAACCTGCTTaGTCAGGGATGGAGCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LANIPLRQTIPYFENVTQSLKPA*SGMELP Trigger: GGGAAGCTCCATCCCTGAGCAAGCAGGTTTCAGGCT...TTGGGTAACATTCTCAAAATAAGGTATAGTCTGTCTCAAAGGAATGTTTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR CCA 90 bp | GATTTGTCTGCTGTAGCACAGCCAGCATTTCCAAGCTTTCATGGGAGAATGGGGATATATATATATCACTaGAGTGCAGTGATTTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: DLSAVAQPAFPSFHGRMGIYIYH*SAVISS Trigger: GCTGGAAATCACTGCACTCCAGTGATATATATATAT...CCCCATTCTCCCATGAAAGCTTGGAAATGCTGGCTGTGCTACAGCAGACAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCGAGGTGGTCTCATGCTCCCCCTTATCTCATTTTACACTTCTCAATGAAGCGTATTTCCCTGTGTTGTaGATGGTAAAGACTATTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GEVVSCSPLSHFTLLNEAYFPVL*MVKTIE Trigger: TTCAATAGTCTTTACCATCCACAACACAGGGAAATA...CGCTTCATTGAGAAGTGTAAAATGAGATAAGGGGGAGCATGAGACCACCTCGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCAAACATTCCTTTGAGACAGACTATACCTTATTTTGAGAATGTTACCCAATTTGAAGTGGAGAGGTaGGAAACAGCCACACTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LANIPLRQTIPYFENVTQFEVER*ETATLR Trigger: CCTCAGTGTGGCTGTTTCTCACCTCTCCACTTCAAA...TTGGGTAACATTCTCAAAATAAGGTATAGTCTGTCTCAAAGGAATGTTTGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGGGAGCCAGGTAAAATTATTCAACTCAGCAATTCTCAAACTTACATTATCGACCTGAGAGGATCATaGACAGCTCTAGGGCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: VREPGKIIQLSNSQTYIIDLRGS*TALGLT Trigger: TGTCAGCCCTAGAGCTGTGCATGATCCTCTCAGGTC...GATAATGTAAGTTTGAGAATTGCTGAGTTGAATAATTTTACCTGGCTCCCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGAAAACATCTCTCTTGGTATGGAGTTAGGTCTCCTCTCACTCGAGAATGAAAAAACAGGTTTGAAGTaGAGAGGTGAGAAACAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: KENISLGMELGLLSLENEKTGLK*RGEKQP Trigger: TGGCTGTTTCTCACCTCTCCACTTCAAACCTGTTTT...TTCATTCTCGAGTGAGAGGAGACCTAACTCCATACCAAGAGAGATGTTTTCCTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR CCA 90 bp | AGATCTTCCATTCTTAACCTCCACACACTATTTCCCTGTGTTGTGGATGGTAAAATTCTGAGGGTAAGCTaGAGAGACAAATGTGACTGG | + |
|
Preference number: 2 (lower is better) Translates to: RSSILNLHTLFPCVVDGKILRVS*RDKCDW Trigger: CCAGTCACATTTGTCTCTCCAGCTTACCCTCAGAAT...TTTACCATCCACAACACAGGGAAATAGTGTGTGGAGGTTAAGAATGGAAGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTTTCAGATGCTCTGGTTTATTTGAGATTGATACAACATCGCCCCCTGGTGAATTTCTCCCCAATACTTaGGACATGAACACTTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: IFRCSGLFEIDTTSPPGEFLPNT*DMNTLC Trigger: ACACAAAGTGTTCATGTCGCAAGTATTGGGGAGAAA...TTCACCAGGGGGCGATGTTGTATCAATCTCAAATAAACCAGAGCATCTGAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTTCAGATGCTCTGGTTTATTTGAGATTGATACAACATCGCCCCCTGGTGAAAAACAAACTCTTGTCTaGTGGAAGAGCAACAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: IFRCSGLFEIDTTSPPGEKQTLV*WKSNKQ Trigger: TTGCTTGTTGCTCTTCCAGCAGACAAGAGTTTGTTT...TTCACCAGGGGGCGATGTTGTATCAATCTCAAATAAACCAGAGCATCTGAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCAACCTTGTTAGGAGTCTCTAAAGTCAATCAGAATGAGTTTTTAGGCATCAAATGTATTTTAGGTTaGCAAAGCCGCCAGATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: EATLLGVSKVNQNEFLGIKCILG*QSRQMH Trigger: ATGCATCTGGCGGCTTTGCCAACCTAAAATACATTT...GATGCCTAAAAACTCATTCTGATTGACTTTAGAGACTCCTAACAAGGTTGCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR CAA 90 bp | TTTCATTCACGACCTTTGCTTTTCTCAGAGTTGACCAAGTCAAGTTaGTTCCTGGGTATGTCTGAAATTTGCAGATTATCATTAGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: FHSRPLLFSELTKSS*FLGMSEICRLSLAI Trigger: AATGGCTAATGATAATCTGCAAATTTCAGACATACCCAGGAACAAACTTGACTTGGTCAACTCTGAGAAAAGCAAAGGTCGTGAATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTTTCAGATGCTCTGGTTTATTTGAGATTGATACAACATCGCCCCCTGGTGAATGCAGCTATGAACAATaGTTTAGGTTGTTTCTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: IFRCSGLFEIDTTSPPGECSYEQ*FRLFLL Trigger: TAACAGAAACAACCTAAAGCATTGTTCATAGCTGCA...TTCACCAGGGGGCGATGTTGTATCAATCTCAAATAAACCAGAGCATCTGAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR TCA 72 bp | GAACCTCGTGGGCTTCCAGCATCCACCTGGGACTACTaGTGTGGACTGGGCAGCTACAGGCGTCGCTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: EPRGLPASTWDY*CGLGSYRRRSQ Trigger: CTGGGAGCGACGCCTGTAGCTGCCCAGTCCACATCAGTAGTCCCAGGTGGATGCTGGAAGCCCACGAGGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CCA 72 bp | GGAGGAGGCTGGAGGCCGAGCAAGGCTGCCTGGAATTaGGGCTCAGAGCTGAATGTGGAATGGATCCCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: GGGWRPSKAAWN*GSELNVEWIPV Trigger: TACCGGGATCCATTCCACATTCAGCTCTGAGCCCCAATTCCAGGCAGCCTTGCTCGGCCTCCAGCCTCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR CCA 72 bp | GAGTTCTCGGCGGAGGCGGTCCTTTTATGTTTCAGGTaGCCCGTGGTCCAGGCTGTAGATGCTTTGGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: EFSAEAVLLCFR*PVVQAVDALAL Trigger: CAGTGCCAAAGCATCTACAGCCTGGACCACGGGCCACCTGAAACATAAAAGGACCGCCTCCGCCGAGAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR CCA 72 bp | GCTTATCAATCTTGCTGGAGCATTGCTCAGCTACAGTaGCAAGAGCCCCGCCTCAGGGGAGTTCTCGGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: AYQSCWSIAQLQ*QEPRLRGVLGG Trigger: TCCGCCGAGAACTCCCCTGAGGCGGGGCTCTTGCCACTGTAGCTGAGCAATGCTCCAGCAAGATTGATAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR TCA 72 bp | GGAGGAAAGTTGGGACGGGGAGTAGACAACTGGGAATaGGCGCTTAGACACTGTCACCCCATCTGCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GGKLGRGVDNWE*ALRHCHPICPA Trigger: AGCAGGGCAGATGGGGTGACAGTGTCTAAGCGCTCATTCCCAGTTGTCTACTCCCCGTCCCAACTTTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR GCA 72 bp | CGTCTTGACGCCATCACTGTCTCTCTGACAATGAGCTaGTGCTATACCCTCTGGGAGTGTCCGTCCACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLDAITVSLTMS*CYTLWECPSTP Trigger: TGGGGTGGACGGACACTCCCAGAGGGTATAGCAGCAGCTCATTGTCAGAGAGACAGTGATGGCGTCAAGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCGGCTGGACACAGCGTGGTACCCAGACCACACCCTGACCGGAGCGCTTCACATAGGAAAACAGGTTaGAAGTGGAGAGGTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TAAGHSVVPRPHPDRSASHRKTG*KWRGEK Trigger: TTTCTCACCTCTCCACTTCAAACCTGTTTTCCTATG...TGAAGCGCTCCGGTCAGGGTGTGGTCTGGGTACCACGCTGTGTCCAGCCGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR CCA 72 bp | ATGCCTTTCCAGGCTAGAACCCAGGTTGTGATCTGCTaGCCAGACACAACACTCAGGCAGCGGTGCATCCTA | + |
|
Preference number: 3 (lower is better) Translates to: MPFQARTQVVIC*PDTTLRQRCIL Trigger: TAGGATGCACCGCTGCCTGAGTGTTGTGTCTGGCCAGCAGATCACAACCTGGGTTCTAGCCTGGAAAGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR GCA 72 bp | AAAATGCCTTTCCAGGCTAGAACCCAGGTTGTGATCTaGTGGCCAGACACAACACTCAGGCAGCGGTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: KMPFQARTQVVI*WPDTTLRQRCI Trigger: GATGCACCGCTGCCTGAGTGTTGTGTCTGGCCAGCAGATCACAACCTGGGTTCTAGCCTGGAAAGGCATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR CCA 72 bp | ACACTGAGGATGAAGAGAGAGCTAAGGATGGCCGGGTaGGACTCAAGGACGATGCGAACTTGTGCGAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TLRMKRELRMAG*DSRTMRTCASC Trigger: ACAACTCGCACAAGTTCGCATCGTCCTTGAGTCCCACCCGGCCATCCTTAGCTCTCTCTTCATCCTCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR CCA 72 bp | GAGAGACCAGCGGAAACGATTCTCACGTTCGTGGATTaGCTCTGCCTGCTCTGCTGTGTAAAGCAGAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: ERPAETILTFVD*LCLLCCVKQKH Trigger: GTGCTTCTGCTTTACACAGCAGAGCAGGCAGAGCCAATCCACGAACGTGAGAATCGTTTCCGCTGGTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACACAGCGTGGTACCCAGACCACACCCTGACCGGAGCGCTTCAGTGACACATAAAATGTATTTTAGGTaGGCAAAGCCGCCAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: GHSVVPRPHPDRSASVTHKMYFR*AKPPDA Trigger: TGCATCTGGCGGCTTTGCCAACCTAAAATACATTTT...ATGTGTCACTGAAGCGCTCCGGTCAGGGTGTGGTCTGGGTACCACGCTGTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR TCA 72 bp | GCTACCTGTTCACACTGCTTTCTTGCAGATGTGAGTTaGACAGCTCTGTTCTACAAGGCCCTCCCTGGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: ATCSHCFLADVS*TALFYKALPGA Trigger: AGCGCCAGGGAGGGCCTTGTAGAACAGAGCTGTTCAACTCACATCTGCAAGAAAGCAGTGTGAACAGGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR TCA 72 bp | GCCCTGCTACCTGTTCACACTGCTTTCTTGCAGATGTaGGTTGAACAGCTCTGTTCTACAAGGCCCTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ALLPVHTAFLQM*VEQLCSTRPSL Trigger: CAGGGAGGGCCTTGTAGAACAGAGCTGTTCAACTCACATCTGCAAGAAAGCAGTGTGAACAGGTAGCAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR GCA 72 bp | GCCCTCCCTGGCGCTATGGGCTGCAGCTATGAACAATaGTTTAGGTTGTTTCTGTTAGGTGTTTGGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALPGAMGCSYEQ*FRLFLLGVWSQ Trigger: CTGGGACCAAACACCTAACAGAAACAACCTAAAGCATTGTTCATAGCTGCAGCCCATAGCGCCAGGGAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR GCA 72 bp | GGTAAAAGACTTGGGGCTATGTCCCTGAAGACTACTTaGCCAGGACTTCTGCAGCTAGAGGAGAGGAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GKRLGAMSLKTT*PGLLQLEERKE Trigger: CTCCTTCCTCTCCTCTAGCTGCAGAAGTCCTGGGCAAGTAGTCTTCAGGGACATAGCCCCAAGTCTTTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR CCA 72 bp | GCTGCCTGGAATTGGGGCTCAGAGCTGAATGTGGAATaGATCCCGGTAGGAGCGAAGATAATTGAGAGACGT | + |
|
Preference number: 3 (lower is better) Translates to: AAWNWGSELNVE*IPVGAKIIERR Trigger: ACGTCTCTCAATTATCTTCGCTCCTACCGGGATCCATTCCACATTCAGCTCTGAGCCCCAATTCCAGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAAGGCTGCCTGGAATTGGGGCTCAGAGCTGAATGTGGAATGGATCCCGGTAGTTTAAAGTCTCAGTaGGCAAGTCTTAGAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: EQGCLELGLRAECGMDPGSLKSQ*ASLRDW Trigger: CCAGTCTCTAAGACTTGCCAACTGAGACTTTAAACT...ACCGGGATCCATTCCACATTCAGCTCTGAGCCCCAATTCCAGGCAGCCTTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR TCA 72 bp | GCAAAGCCGCCAGATGCATATGGTCTAATTCCGTCTTaGCGCCATCACTGTCTCTCTGACAATGAGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AKPPDAYGLIPS*RHHCLSDNELL Trigger: CAGCAGCTCATTGTCAGAGAGACAGTGATGGCGTCAAGACGGAATTAGACCATATGCATCTGGCGGCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR TCA 72 bp | CAGCTGCTTTTACCCACCCAAGCCACCAAGCCTGTGTaGGTTCATATGTCTAAAGAGCTTGCAGGGATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QLLLPTQATKPV*VHMSKELAGMC Trigger: GCACATCCCTGCAAGCTCTTTAGACATATGAACTCACACAGGCTTGGTGGCTTGGGTGGGTAAAAGCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR TCA 72 bp | CTAGCTTTCATATTCCCCCTAGCGTGTGCAAGGCCCTaGCGTCCATTCCCAAACTCAAGATGCTGCAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LAFIFPLACARP*RPFPNSRCCKC Trigger: GCATTTGCAGCATCTTGAGTTTGGGAATGGACGTCAGGGCCTTGCACACGCTAGGGGGAATATGAAAGCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR GCA 72 bp | ACAGACTCTCAAACGCGTAGGTGTGCTTATCAATCTTaGTGGAGCATTGCTCAGCTACAGTGGCAAGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: TDSQTRRCAYQS*WSIAQLQWQEP Trigger: GGGCTCTTGCCACTGTAGCTGAGCAATGCTCCAGCAAGATTGATAAGCACACCTACGCGTTTGAGAGTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR CCA 72 bp | GAACAGCTCTGTTCTACAAGGCCCTCCCTGGCGCTATaGGCTGCAGCTATGAACAATGCTTTAGGTTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: EQLCSTRPSLAL*AAAMNNALGCF Trigger: GAAACAACCTAAAGCATTGTTCATAGCTGCAGCCCATAGCGCCAGGGAGGGCCTTGTAGAACAGAGCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR CCA 72 bp | AGGGGATTGCTTAAGACAGACGTAAAGCCCGCCCTTTaGGTGGGGCTGAAGGTGTTTCTAGATATGGATGAC | + |
|
Preference number: 3 (lower is better) Translates to: RGLLKTDVKPAL*VGLKVFLDMDD Trigger: GTCATCCATATCTAGAAACACCTTCAGCCCCACCCAAAGGGCGGGCTTTACGTCTGTCTTAAGCAATCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGCCTGAAACCTGCTTGCTCAGGGATGGAGCTTCCCGCTCAATCTTTCTGCATAATTGAGAGACGTTaGTCCCCTTGCTTTAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: PSLKPACSGMELPAQSFCIIERR*SPCFSY Trigger: ATAGCTAAAGCAAGGGGACAAACGTCTCTCAATTAT...GCAGAAAGATTGAGCGGGAAGCTCCATCCCTGAGCAAGCAGGTTTCAGGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR TCA 72 bp | CCAACAGTGCTCATTCACTGCGCAGTCAGCAGCTCTTaGTCATTTGTGGTAATGAAGTATGCAGCCTCCACG | + |
|
Preference number: 3 (lower is better) Translates to: PTVLIHCAVSSS*SFVVMKYAAST Trigger: CGTGGAGGCTGCATACTTCATTACCACAAATGATCAAGAGCTGCTGACTGCGCAGTGAATGAGCACTGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR GCA 72 bp | AACTTCCTCTGTTGGCTCTATGACCTGAGAGGATCATaGACAGCTCTAGGGCTGACAGGGAGCCAAGTATAT | + |
|
Preference number: 3 (lower is better) Translates to: NFLCWLYDLRGS*TALGLTGSQVY Trigger: ATATACTTGGCTCCCTGTCAGCCCTAGAGCTGTGCATGATCCTCTCAGGTCATAGAGCCAACAGAGGAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR GCA 72 bp | AGAGTAGGCATCTCTATTACAGTTGAACAGGAAATCTaGTTAACCTGGCTGAGAGGCAGTGCCCTCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RVGISITVEQEI*LTWLRGSALQL Trigger: CAGCTGGAGGGCACTGCCTCTCAGCCAGGTTAAGCAGATTTCCTGTTCAACTGTAATAGAGATGCCTACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR CCA 72 bp | AGAAACAACAAAACAGACACAAAGTTGCTCCAAAACTaGCGCAGCCTTCGAGGGCAACTCCACCTCTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RNNKTDTKLLQN*RSLRGQLHLCQ Trigger: CTGACAGAGGTGGAGTTGCCCTCGAAGGCTGCGCCAGTTTTGGAGCAACTTTGTGTCTGTTTTGTTGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGTGTGTGTGTACCTACAAAGGCCAGAAGAGTATGTTGGAAACCCTGAAGGGTATAGGAGGAAAGTaGGGACGGGGAGTAGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCTYKGQKSMLETLKGIGGK*GRGVDN Trigger: GTTGTCTACTCCCCGTCCCAACTTTCCTCCTATACC...CTTCAGGGTTTCCAACATACTCTTCTGGCCTTTGTAGGTACACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGCTATGTCCCTGAAGACTACTTGCCCAGGACTTCTGCAGCTAGAGGAGAGCTCCTTTTTGTTGGTTaGTTTGCTCCACTTTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: WGYVPEDYLPRTSAARGELLFVG*FAPLCF Trigger: AAAGCAAAGTGGAGCAAACAAACCAACAAAAAGGAG...CTCTCCTCTAGCTGCAGAAGTCCTGGGCAAGTAGTCTTCAGGGACATAGCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGTGTGGGAGGAGTCAAGTCAGTCCCCTCCGTACAAACACTAACAAAGATTTCCCCAGTTTGCTCTaGGAAGTCCCCAGAACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: RKCGRSQVSPLRTNTNKDFPSLL*EVPRTV Trigger: TACTGTTCTGGGGACTTCCAAGAGCAAACTGGGGAA...ATCTTTGTTAGTGTTTGTACGGAGGGGACTGACTTGACTCCTCCCACACTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTTGTCTGCTGTAGCACAGCCAGCATTTCCAAGCTTTCATGGGAGAATGGGGAGGGCAAAAGCCATCTaGGTTTCTCCTCACAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: DLSAVAQPAFPSFHGRMGRAKAI*VSPHSK Trigger: CTTACTGTGAGGAGAAACCAAGATGGCTTTTGCCCT...CCCCATTCTCCCATGAAAGCTTGGAAATGCTGGCTGTGCTACAGCAGACAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCATTTCCAAGCTTTCATGGGAGAATGGGGACCAGTGCTCTCGGAGAACCTCCCTCTGCTTATCCTTaGAGTATCTATAGAGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PAFPSFHGRMGTSALGEPPSAYP*SIYREE Trigger: TTCCTCTCTATAGATACTCAAAGGATAAGCAGAGGG...AGGTTCTCCGAGAGCACTGGTCCCCATTCTCCCATGAAAGCTTGGAAATGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCGAGGTGGTCTCATGCTCCCCCTTATCTCATTTTACACTTCTCAATGAAGCGTTTCATTCACGACCTTaGCTTTTCTCAGAGTTGACC | + |
|
Preference number: 3 (lower is better) Translates to: GEVVSCSPLSHFTLLNEAFHSRP*LFSELT Trigger: GGTCAACTCTGAGAAAAGCAAAGGTCGTGAATGAAA...CGCTTCATTGAGAAGTGTAAAATGAGATAAGGGGGAGCATGAGACCACCTCGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR GCA 72 bp | CTGCTGTGTAAAGCAGAAGCACTCGGGGTGAACCAATaGAATCAGGTTTTCATGACAAATAAAGCTGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLCKAEALGVNQ*NQVFMTNKAGG Trigger: CCCTCCAGCTTTATTTGTCATGAAAACCTGATTGCATTGGTTCACCCCGAGTGCTTCTGCTTTACACAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CCA 72 bp | CCAGCCAGAGGTAGCTTTACCTTACAAAGAGACACTTaGCAATGCCCGAAGACACTTGTGATTATTGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PARGSFTLQRDT*QCPKTLVIIAA Trigger: AGCTGCAATAATCACAAGTGTCTTCGGGCATTGCCAAGTGTCTCTTTGTAAGGTAAAGCTACCTCTGGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTTGGTATGAAACCCCAGCTCAGTGCTCTCTTCAAACAAAATCGCACACGAATCCCTGCTCCAGGATaGCTTACTTCAGTGAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: LFGMKPQLSALFKQNRTRIPAPG*LTSVNN Trigger: ATTGTTCACTGAAGTAAGCAATCCTGGAGCAGGGAT...TCGTGTGCGATTTTGTTTGAAGAGAGCACTGAGCTGGGGTTTCATACCAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGTATGTTGGAAACCCTGAAGCTGTAGTTACAGGAGGTTGTAGGCACTTCCTAGGAAACAAACTCTaGTCTGCTGGAAGAGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: EEYVGNPEAVVTGGCRHFLGNKL*SAGRAT Trigger: TGTTGCTCTTCCAGCAGACAAGAGTTTGTTTCCTAG...GAAGTGCCTACAACCTCCTGTAACTACAGCTTCAGGGTTTCCAACATACTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTGGTTCTGGAGGGTGGACTGGATTTTGTTAACAATGTGGCTAGACTGAATCATTGTTTAATTGGCTaGTGGAGAATGGGGCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GVVLEGGLDFVNNVARLNHCLIG*WRMGPN Trigger: GTTTGGCCCCATTCTCCACAAGCCAATTAAACAATG...ATTCAGTCTAGCCACATTGTTAACAAAATCCAGTCCACCCTCCAGAACCACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR TCA 72 bp | TTGTCTGCTGGAAGAGCAACAAGCAATCTTAATTGTTaGGCCATCTCTCCAGCCCTGTCCCTATACTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: LSAGRATSNLNC*AISPALSLYLW Trigger: CCATAAGTATAGGGACAGGGCTGGAGAGATGGCTCAACAATTAAGATTGCTTGTTGCTCTTCCAGCAGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR TCA 72 bp | TACAAAGAGACACTTGGCAATGCCCGAAGACACTTGTaGTTATTGCAGCTGGTAGGGAGAGAGGAAGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: YKETLGNARRHL*LLQLVGREEDD Trigger: ATCATCTTCCTCTCTCCCTACCAGCTGCAATAATCACAAGTGTCTTCGGGCATTGCCAAGTGTCTCTTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGTGTGTGTGTACCTACAAAGGCCAGAAGAGTATGTTGGAAACCCTGAAGGACAAAAACCGAGCTTaGTGTTCTGTGTCATTACTG | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCTYKGQKSMLETLKDKNRA*CSVSLL Trigger: CAGTAATGACACAGAACACAAAGCTCGGTTTTTGTC...CTTCAGGGTTTCCAACATACTCTTCTGGCCTTTGTAGGTACACACACACACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGCAACAAGCAATCTTAATTGTTGAGCCATCTCTCCAGCCCTGTCCCTATTCTTGCAGATGTGAGTaGAACAGCTCTGTTCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: EEQQAILIVEPSLQPCPYSCRCE*NSSVLQ Trigger: TTGTAGAACAGAGCTGTTCAACTCACATCTGCAAGA...ATAGGGACAGGGCTGGAGAGATGGCTCAACAATTAAGATTGCTTGTTGCTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCAAACATTCCTTTGAGACAGACTATACCTTATTTTGAGAATGTTACCCAACAAGGCTGCCTGGAATaGGGGCTCAGAGCTGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: LANIPLRQTIPYFENVTQQGCLE*GLRAEC Trigger: ACATTCAGCTCTGAGCCCCAATTCCAGGCAGCCTTG...TTGGGTAACATTCTCAAAATAAGGTATAGTCTGTCTCAAAGGAATGTTTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGATGGATTTGTCTGCTGTAGCACAGCCAGCATTTCCAAGCTTTCATGGGAGACAACACGTACAGTGTTaGATAATCCTTTTCAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GMDLSAVAQPAFPSFHGRQHVQC*IILFSN Trigger: ATTGCTGAAAAGGATTATCAAACACTGTACGTGTTG...TCTCCCATGAAAGCTTGGAAATGCTGGCTGTGCTACAGCAGACAAATCCATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR TCA 72 bp | GCCATGGTAGATGCTGATATTGAAATTTTAAATGACTaGCGTGCCAAGGAGCAAAGAGAGACCAGCGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: AMVDADIEILND*RAKEQRETSGN Trigger: GTTTCCGCTGGTCTCTCTTTGCTCCTTGGCACGTCAGTCATTTAAAATTTCAATATCAGCATCTACCATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGCAACAAGCAATCTTAATTGTTGAGCCATCTCTCCAGCCCTGTCCCTATACCTTAAATTGTGCTTaGACCCATATCACCTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: EEQQAILIVEPSLQPCPYTLNCA*THITWI Trigger: AATCCAGGTGATATGGGTCAAAGCACAATTTAAGGT...ATAGGGACAGGGCTGGAGAGATGGCTCAACAATTAAGATTGCTTGTTGCTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGCCAGAAGAGTATGTTGGAAACCCTGAAGCTGTAGTTACAGGAGGTTGTGAATTAAATGAACTGTaGGGAGATGGTAGAGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: QRPEEYVGNPEAVVTGGCELNEL*GDGRGI Trigger: TATACCTCTACCATCTCCCAACAGTTCATTTAATTC...ACAACCTCCTGTAACTACAGCTTCAGGGTTTCCAACATACTCTTCTGGCCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTCAGATGCTCTGGTTTATTTGAGATTGATACAACATCGCCCCCTGGTGAACGCAGTCAGCAGCTCTaGATCATTTGTGGTAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: IFRCSGLFEIDTTSPPGERSQQL*IICGNE Trigger: TTCATTACCACAAATGATCAAGAGCTGCTGACTGCG...TTCACCAGGGGGCGATGTTGTATCAATCTCAAATAAACCAGAGCATCTGAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR TCA 72 bp | CATGGCACCACTAATTCATGCCCTCTGCTTATCCTTTaGGTATCTATAGAGAGGAATCGTGGGACTTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: HGTTNSCPLLIL*VSIERNRGTFY Trigger: ATAAAAAGTCCCACGATTCCTCTCTATAGATACTCAAAGGATAAGCAGAGGGCATGAATTAGTGGTGCCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR TCA 72 bp | GCCTCAAATCCTGCAGTTATTTACTTGAACTGTGTTTaGTTCACGACCCTCTCATTGAGTGATATGAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: ASNPAVIYLNCV*FTTLSLSDMRH Trigger: GTGTCTCATATCACTCAATGAGAGGGTCGTGAATCAAACACAGTTCAAGTAAATAACTGCAGGATTTGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR GCA 72 bp | TCATTCACACAAGCTGAGAGAGACAGCCTCAAATCCTaGAGTTATTTACTTGAACTGTGTTTGATTCACGAC | + |
|
Preference number: 3 (lower is better) Translates to: SFTQAERDSLKS*SYLLELCLIHD Trigger: GTCGTGAATCAAACACAGTTCAAGTAAATAACTGCAGGATTTGAGGCTGTCTCTCTCAGCTTGTGTGAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR TCA 72 bp | GATGACCTAATCGATGACTCAATCCATGGACAGATTTaGGAATTAAATGAACTGTTGGGAGATGGTAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: DDLIDDSIHGQI*ELNELLGDGRG Trigger: ACCTCTACCATCTCCCAACAGTTCATTTAATTCTCAAATCTGTCCATGGATTGAGTCATCGATTAGGTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR TCA 72 bp | AGTTGGCAAGTCTTAGAGACTGGTTTCTTCATAGCCTaGCATTGCTCCAGAGTTAGAGCTTTAAAATGTATT | + |
|
Preference number: 3 (lower is better) Translates to: SWQVLETGFFIA*HCSRVRALKCI Trigger: AATACATTTTAAAGCTCTAACTCTGGAGCAATGTCAGGCTATGAAGAAACCAGTCTCTAAGACTTGCCAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR TCA 72 bp | CTAATCTCCATATATATATATATCACTGGAGTGCAGTaGTTTCCAGCCAGAGGTAGCTTTACCTTACAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LISIYIYITGVQ*FPARGSFTLQR Trigger: TCTTTGTAAGGTAAAGCTACCTCTGGCTGGAAATCACTGCACTCCAGTGATATATATATATATGGAGATTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CCA 72 bp | TATGAACAATGCTTTAGGTTGTTTCTGTTAGGTGTTTaGTCCCAGAAACAACAAAACAGACACAAAGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: YEQCFRLFLLGV*SQKQQNRHKVA Trigger: AGCAACTTTGTGTCTGTTTTGTTGTTTCTGGGACCAAACACCTAACAGAAACAACCTAAAGCATTGTTCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTAGGGAGCCAGGTAAAATTATTCAACTCAGCAATTCTCAAACTTACATTATCGAACAATGCTTTAGGTaGTTTCTGTTAGGTGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VREPGKIIQLSNSQTYIIEQCFR*FLLGVW Trigger: CCAAACACCTAACAGAAACAACCTAAAGCATTGTTC...GATAATGTAAGTTTGAGAATTGCTGAGTTGAATAATTTTACCTGGCTCCCTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR GCA 72 bp | ATTACTGACAAGCTTTCTAAGTCTACTGATACTCATTaGGTAAAAACAAAGAAGGTCAGACTCAACGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ITDKLSKSTDTH*VKTKKVRLNVQ Trigger: TTGAACGTTGAGTCTGACCTTCTTTGTTTTTACGCAATGAGTATCAGTAGACTTAGAAAGCTTGTCAGTAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR TCA 72 bp | AATTTTATGTGGTTTCTAAGCTGGCAAACATTCCTTTaGGACAGACTATACCTTATTTTGAGAATGTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: NFMWFLSWQTFL*DRLYLILRMLP Trigger: GGGTAACATTCTCAAAATAAGGTATAGTCTGTCTCAAAGGAATGTTTGCCAGCTTAGAAACCACATAAAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| CDS-3UTR CCA 90 bp | GCTATACCCTCTGGGAGTGTCCGTCCACCCCAGCCTGGCCGACTCCATGAATACTCCACGGAGGGTGTATaGGCGTGGCCCAGGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIPSGSVRPPQPGRLHEYSTEGV*AWPRGS Trigger: AGAACCCCTGGGCCACGCCCATACACCCTCCGTGGA...GTATTCATGGAGTCGGCCAGGCTGGGGTGGACGGACACTCCCAGAGGGTATAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| CDS-3UTR TCA 90 bp | GCACGCCCGAAGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTGACGGGTACCGGGGTATCTaGGAGGTCATGGAGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARPKAKLSGLCHSSSACDGYRGI*EVMEKS Trigger: GCTTTTCTCCATGACCTCTCAGATACCCCGGTACCC...GTCACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCTTCGGGCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214102.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGTATGTTGGAAACCCTGAAGCTGTAGTTACAGGAGGTTGTAGGCACTTCCAGGGGGCCCGTGCCTaGAGCACCTGGCCCCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: EEYVGNPEAVVTGGCRHFQGARA*STWPLT Trigger: GGTAAGGGGCCAGGTGCTCCAGGCACGGGCCCCCTG...GAAGTGCCTACAACCTCCTGTAACTACAGCTTCAGGGTTTCCAACATACTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR GCA 90 bp | GCACGCCCGAAGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTGACCGCATCTGCAGCCTCTaGAGACTTGGCGATTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARPKAKLSGLCHSSSACDRICSL*RLGDFR Trigger: TCTGAAATCGCCAAGTCTGCAGAGGCTGCAGATGCG...GTCACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCTTCGGGCGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213503.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS-3UTR CCA 90 bp | CTTGCTGGAGCATTGCTCAGCTACAGTGGCAAGAGCCCCGCCTCAGGGGAGTTCCAGCCTCTGCAGACTTaGCGATTTCAGAAAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LAGALLSYSGKSPASGEFQPLQT*RFQKDA Trigger: AGCATCTTTCTGAAATCGCCAAGTCTGCAGAGGCTG...GAACTCCCCTGAGGCGGGGCTCTTGCCACTGTAGCTGAGCAATGCTCCAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTTGGTATGAAACCCCAGCTCAGTGCTCTCTTCAAACAAAATCGCACACGACTGCAGCCGCACACCTaGCCTGCTGGGTCTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFGMKPQLSALFKQNRTRLQPHT*PAGSQP Trigger: GGGCTGAGACCCAGCAGGCCAGGTGTGCGGCTGCAG...TCGTGTGCGATTTTGTTTGAAGAGAGCACTGAGCTGGGGTTTCATACCAAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGATGAGAGCATCCATCCCAATAGAATGGAGGAGGCTGGAGGCCGAGCAATGGCCAAACACATACTaGGGGAACCGCTTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRMRASIPIEWRRLEAEQWPNTY*GNRFSS Trigger: TGAGCTGAAGCGGTTCCCTCAGTATGTGTTTGGCCA...TTGCTCGGCCTCCAGCCTCCTCCATTCTATTGGGATGGATGCTCTCATCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCACGCCCGAAGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTCGCATCTGCAGCCTCTaGAGACTTGGCGATTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RARPKAKLSGLCHSSSACRICSL*RLGDFR Trigger: TCTGAAATCGCCAAGTCTGCAGAGGCTGCAGATGCG...ACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCTTCGGGCGTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213503.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATCACCAGGGACCTGACAGGACAGACTTGAGGCAGAGCACGCCCGAAGGCCATCCGGGAACCAGTTaGGAAATGCATGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KNHQGPDRTDLRQSTPEGHPGTS*EMHAAV Trigger: TACTGCAGCATGCATTTCCCAACTGGTTCCCGGATG...GCCTTCGGGCGTGCTCTGCCTCAAGTCTGTCCTGTCAGGTCCCTGGTGATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213503.2 ENSMUST00000213856.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCACGCCCGAAGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTCATCCGGGAACCAGTTaGGAAATGCATGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RARPKAKLSGLCHSSSACHPGTS*EMHAAV Trigger: TACTGCAGCATGCATTTCCCAACTGGTTCCCGGATG...ACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCTTCGGGCGTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213503.2 ENSMUST00000213856.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATCACCAGGGACCTGACAGGACAGACTTGAGGCAGAGCACGCCCGAAGGCCAGCCTCTGCAGACTTaGCGATTTCAGAAAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNHQGPDRTDLRQSTPEGQPLQT*RFQKDA Trigger: AGCATCTTTCTGAAATCGCCAAGTCTGCAGAGGCTG...GCCTTCGGGCGTGCTCTGCCTCAAGTCTGTCCTGTCAGGTCCCTGGTGATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213503.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS-3UTR CCA 90 bp | GCACGCCCGAAGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTGACCAGCCTCTGCAGACTTaGCGATTTCAGAAAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARPKAKLSGLCHSSSACDQPLQT*RFQKDA Trigger: AGCATCTTTCTGAAATCGCCAAGTCTGCAGAGGCTG...GTCACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCTTCGGGCGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213503.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| 3UTR CAA 72 bp | TGCTACCTGTTCACACTGCTTTCTTGCAGATGTGAGTaGAACAGCTCTGTTCTACAAGGCCCTCCCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CYLFTLLSCRCE*NSSVLQGPPWR Trigger: GCGCCAGGGAGGGCCTTGTAGAACAGAGCTGTTCAACTCACATCTGCAAGAAAGCAGTGTGAACAGGTAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR CAA 72 bp | AGAGAGACCAGCGGAAACGATTCTCACGTTCGTGGATaGGCTCTGCCTGCTCTGCTGTGTAAAGCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RETSGNDSHVRG*ALPALLCKAEA Trigger: TGCTTCTGCTTTACACAGCAGAGCAGGCAGAGCCAATCCACGAACGTGAGAATCGTTTCCGCTGGTCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| 3UTR CAA 72 bp | GAGGGTATTTCAAAGTCGGTTAATTCTCACCTTGGTTaGCTTGACCCTTCCCTCACTGCTCCTGGGCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGISKSVNSHLG*LDPSLTAPGPR Trigger: CCTCGGCCCAGGAGCAGTGAGGGAAGGGTCAAGCAAACCAAGGTGAGAATTAACCGACTTTGAAATACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGTATGTTGGAAACCCTGAAGCTGTAGTTACAGGAGGTTGTAGGCACTTCGCACACCTGGCCTGCTaGGTCTCAGCCCCACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EEYVGNPEAVVTGGCRHFAHLAC*VSAPLS Trigger: AGAAAGTGGGGCTGAGACCCAGCAGGCCAGGTGTGC...GAAGTGCCTACAACCTCCTGTAACTACAGCTTCAGGGTTTCCAACATACTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAGTTTGCTCTTGGAAGTCCCCAGAACAGTAGAGTAGGCATCTCTATTACATTCCAGGGTCTCAAATaGCCTTCTCTCCAGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PQFALGSPQNSRVGISITFQGLK*PSLQPR Trigger: CCGTGGCTGGAGAGAAGGTCATTTGAGACCCTGGAA...TGTAATAGAGATGCCTACTCTACTGTTCTGGGGACTTCCAAGAGCAAACTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTCTGTCATTCCAGCTCAGCTTGTGACTAGGTTAAAAATCCTGAGGGCACGCATCTGCAGCCTCTaGAGACTTGGCGATTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGSVIPAQLVTRLKILRARICSL*RLGDFR Trigger: TCTGAAATCGCCAAGTCTGCAGAGGCTGCAGATGCG...TGCCCTCAGGATTTTTAACCTAGTCACAAGCTGAGCTGGAATGACAGAGCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213503.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCAACAAGCAATCTTAATTGTTGAGCCATCTCTCCAGCCCTGTCCCTATCCATCTCGGATGAAATaGTTCACCCAGGGGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EEQQAILIVEPSLQPCPYPSRMK*FTQGAR Trigger: ACGGGCCCCCTGGGTGAAGCATTTCATCCGAGATGG...ATAGGGACAGGGCTGGAGAGATGGCTCAACAATTAAGATTGCTTGTTGCTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTCAGATGCTCTGGTTTATTTGAGATTGATACAACATCGCCCCCTGGTGAAGCCGCACACCTGGCCTaGTGGGTCTCAGCCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: IFRCSGLFEIDTTSPPGEAAHLA*WVSAPL Trigger: AAGTGGGGCTGAGACCCAGCAGGCCAGGTGTGCGGC...TTCACCAGGGGGCGATGTTGTATCAATCTCAAATAAACCAGAGCATCTGAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTACCTACAAAGGCCAGAAGAGTATGTTGGAAACCCTGAAGACTAGGATCTCCTTCTaGAGCCGCACACCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCTYKGQKSMLETLKTRISF*SRTPGL Trigger: CAGGCCAGGTGTGCGGCTGCAGAAGGAGATCCTAGT...CTTCAGGGTTTCCAACATACTCTTCTGGCCTTTGTAGGTACACACACACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR GCA 90 bp | GATTTGTCTGCTGTAGCACAGCCAGCATTTCCAAGCTTTCATGGGAGAATGGGGACGCTGCGGAATATCTaGCAACTGCACACGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLSAVAQPAFPSFHGRMGTLRNI*QLHTCE Trigger: CTCACACGTGTGCAGTTGGCAGATATTCCGCAGCGT...CCCCATTCTCCCATGAAAGCTTGGAAATGCTGGCTGTGCTACAGCAGACAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGAAGTGTGGGAGGAGTCAAGTCAGTCCCCTCCGTACAAACACTAACAAAGCAGTTGAACTGTTTGTaGCTTGGGCTTCCAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGSVGGVKSVPSVQTLTKQLNCL*LGLPGS Trigger: AGACCCTGGAAGCCCAAGGCACAAACAGTTCAACTG...CTTTGTTAGTGTTTGTACGGAGGGGACTGACTTGACTCCTCCCACACTTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR CAA 72 bp | GTATTTCAAAGTCGGTTAATTCTCACCTTGGTTTGCTaGACCCTTCCCTCACTGCTCCTGGGCCGAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VFQSRLILTLVC*TLPSLLLGRGM Trigger: CATCCCTCGGCCCAGGAGCAGTGAGGGAAGGGTCAAGCAAACCAAGGTGAGAATTAACCGACTTTGAAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAACGCGTAGGTGTGCTTATCAATCTTGCTGGAGCATTGCTCAGCTACAGTTGGCCAAACACATACTaGGGGAACCGCTTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKRVGVLINLAGALLSYSWPNTY*GNRFSS Trigger: TGAGCTGAAGCGGTTCCCTCAGTATGTGTTTGGCCA...ACTGTAGCTGAGCAATGCTCCAGCAAGATTGATAAGCACACCTACGCGTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTACCTACAAAGGCCAGAAGAGTATGTTGGAAACCCTGAAGAGGAAGCAGGGGTCCTaGGGGTATGGATACACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCTYKGQKSMLETLKRKQGS*GYGYTP Trigger: TGGAGTGTATCCATACCCTCAGGACCCCTGCTTCCT...CTTCAGGGTTTCCAACATACTCTTCTGGCCTTTGTAGGTACACACACACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCACGCCCGAAGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTGCGATTTCAGAAAGATaGTCGAAGGTCTCTCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RARPKAKLSGLCHSSSACAISER*SKVSLN Trigger: GTTTAGAGAGACCTTCGAGCATCTTTCTGAAATCGC...ACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCTTCGGGCGTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213503.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| 3UTR CAA 72 bp | TGTCTCCTGGAAAGAGATTCAGGCAGTCCTGACAACTaGTTAGACCATGTGCAGAAAAGACTGCGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLLERDSGSPDN*LDHVQKRLRLD Trigger: GTCCAGCCGCAGTCTTTTCTGCACATGGTCTAACAAGTTGTCAGGACTGCCTGAATCTCTTTCCAGGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTTGGTATGAAACCCCAGCTCAGTGCTCTCTTCAAACAAAATCGCACACGATGGCCAAACACATACTaGGGGAACCGCTTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFGMKPQLSALFKQNRTRWPNTY*GNRFSS Trigger: TGAGCTGAAGCGGTTCCCTCAGTATGTGTTTGGCCA...TCGTGTGCGATTTTGTTTGAAGAGAGCACTGAGCTGGGGTTTCATACCAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTGACTAGGTTAAAATGGCCAAACACATACTaGGGGAACCGCTTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQNSQGSVIPAQLVTRLKWPNTY*GNRFSS Trigger: TGAGCTGAAGCGGTTCCCTCAGTATGTGTTTGGCCA...TTTTAACCTAGTCACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213503.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS-3UTR CCA 90 bp | CCACCTAGGGAGCACTTCCCTCCTATACCTTCCACCAATCTTACCATTATGACACATCCGGGAACCAGTTaGGAAATGCATGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PPREHFPPIPSTNLTIMTHPGTS*EMHAAV Trigger: TACTGCAGCATGCATTTCCCAACTGGTTCCCGGATG...TGTCATAATGGTAAGATTGGTGGAAGGTATAGGAGGGAAGTGCTCCCTAGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213503.2 ENSMUST00000216830.2 |
||
| 3UTR CAA 72 bp | AGAGCTTGCAGGGATGTGCGGGGCCCACAGTATAATTaGTTGCTGACGTTGTTGTCTGTGAATCTAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RACRDVRGPQYN*LLTLLSVNLKG Trigger: TCCCTTTAGATTCACAGACAACAACGTCAGCAACAAATTATACTGTGGGCCCCGCACATCCCTGCAAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAAACATCATTTTTCATAGGACCACCTAGGGAGCACTTCCCTCCTATACCTTGGCCAAACACATACTaGGGGAACCGCTTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKTSFFIGPPREHFPPIPWPNTY*GNRFSS Trigger: TGAGCTGAAGCGGTTCCCTCAGTATGTGTTTGGCCA...AGGTATAGGAGGGAAGTGCTCCCTAGGTGGTCCTATGAAAAATGATGTTTTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213503.2 ENSMUST00000216830.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGTATGTTGGAAACCCTGAAGCTGTAGTTACAGGAGGTTGTAGGCACTTCCATCCGGGAACCAGTTaGGAAATGCATGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EEYVGNPEAVVTGGCRHFHPGTS*EMHAAV Trigger: TACTGCAGCATGCATTTCCCAACTGGTTCCCGGATG...GAAGTGCCTACAACCTCCTGTAACTACAGCTTCAGGGTTTCCAACATACTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTACCTACAAAGGCCAGAAGAGTATGTTGGAAACCCTGAAGCACGATATCAAAAGATaGCTGCAGCTCCCACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCTYKGQKSMLETLKHDIKR*LQLPQV Trigger: GACCTGTGGGAGCTGCAGCCATCTTTTGATATCGTG...CTTCAGGGTTTCCAACATACTCTTCTGGCCTTTGTAGGTACACACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTAGGGCTGACAGGGAGCCAAGTATATTTCTCACACATTAATCTTCTCTTAGGGGTCCTGAGGGTATaGATACACTCCATCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALGLTGSQVYFSHINLLLGVLRV*IHSITS Trigger: GCTGGTGATGGAGTGTATCCATACCCTCAGGACCCC...TAAGAGAAGATTAATGTGTGAGAAATATACTTGGCTCCCTGTCAGCCCTAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAAATACGAACTCCCTATCGCTTACATCATTCATATAAGTTAGCATTCGATCGCCCCCATCTCGGATaGAATGCTTCACCCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKIRTPYRLHHSYKLAFDRPHLG*NASPRG Trigger: CCCCCTGGGTGAAGCATTTCATCCGAGATGGGGGCG...ATCGAATGCTAACTTATATGAATGATGTAAGCGATAGGGAGTTCGTATTTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCCAGAAGAGTATGTTGGAAACCCTGAAGCTGTAGTTACAGGAGGTTGTCAGCCTCTGCAGACTTaGCGATTTCAGAAAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRPEEYVGNPEAVVTGGCQPLQT*RFQKDA Trigger: AGCATCTTTCTGAAATCGCCAAGTCTGCAGAGGCTG...ACAACCTCCTGTAACTACAGCTTCAGGGTTTCCAACATACTCTTCTGGCCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR CAA 72 bp | GTGCGGGGCCCACAGTATAATTTGTTGCTGACGTTGTaGTCTGTGAATCTAAAGGGACCTTTGCTTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VRGPQYNLLLTL*SVNLKGPLLPF Trigger: GAATGGAAGCAAAGGTCCCTTTAGATTCACAGACAACAACGTCAGCAACAAATTATACTGTGGGCCCCGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| 3UTR CAA 72 bp | GATGTGCGGGGCCCACAGTATAATTTGTTGCTGACGTaGTTGTCTGTGAATCTAAAGGGACCTTTGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVRGPQYNLLLT*LSVNLKGPLLP Trigger: TGGAAGCAAAGGTCCCTTTAGATTCACAGACAACAACGTCAGCAACAAATTATACTGTGGGCCCCGCACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAGTTTGCTCTTGGAAGTCCCCAGAACAGTAGAGTAGGCATCTCTATTACAGCGATTTCAGAAAGATaGTCGAAGGTCTCTCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQFALGSPQNSRVGISITAISER*SKVSLN Trigger: GTTTAGAGAGACCTTCGAGCATCTTTCTGAAATCGC...TGTAATAGAGATGCCTACTCTACTGTTCTGGGGACTTCCAAGAGCAAACTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCAACCTTGTTAGGAGTCTCTAAAGTCAATCAGAATGAGTTTTTAGGCATCCGCATCTGCAGCCTCTaGAGACTTGGCGATTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EATLLGVSKVNQNEFLGIRICSL*RLGDFR Trigger: TCTGAAATCGCCAAGTCTGCAGAGGCTGCAGATGCG...GATGCCTAAAAACTCATTCTGATTGACTTTAGAGACTCCTAACAAGGTTGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| CDS-3UTR GCA 90 bp | GTTAGGGAGCCAGGTAAAATTATTCAACTCAGCAATTCTCAAACTTACATTATCAGAGCAGAGCCCCAGTaGACAGAGATGCCCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VREPGKIIQLSNSQTYIIRAEPQ*TEMPPL Trigger: GAGTGGGGGCATCTCTGTGCACTGGGGCTCTGCTCT...GATAATGTAAGTTTGAGAATTGCTGAGTTGAATAATTTTACCTGGCTCCCTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAACATCTCTCTTGGTATGGAGTTAGGTCTCCTCTCACTCGAGAATGAACATCCGGGAACCAGTTaGGAAATGCATGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KENISLGMELGLLSLENEHPGTS*EMHAAV Trigger: TACTGCAGCATGCATTTCCCAACTGGTTCCCGGATG...TTCATTCTCGAGTGAGAGGAGACCTAACTCCATACCAAGAGAGATGTTTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAAAACTCTCAGGGCTCTGTCATTCCAGCTCAGCTTGTGACTAGGTTAAAAGTATCTGAGAGGTCATaGAGAAAAGCAAAGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQNSQGSVIPAQLVTRLKVSERS*RKAKAA Trigger: TGCAGCCTTTGCTTTTCTCCATGACCTCTCAGATAC...TTTTAACCTAGTCACAAGCTGAGCTGGAATGACAGAGCCCTGAGAGTTTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214102.2 |
||
| 3UTR CAA 72 bp | AGTTACGAGACCCGGTTACGGACCTTAAATTGTGCTTaGACCCATATCACCTGGATTAGCTGCTGTTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SYETRLRTLNCA*THITWISCCYL Trigger: CAAGTAACAGCAGCTAATCCAGGTGATATGGGTCAAAGCACAATTTAAGGTCCGTAACCGGGTCTCGTAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR CAA 72 bp | GGCGCTATGGGCTGCAGCTATGAACAATGCTTTAGGTaGTTTCTGTTAGGTGTTTGGTCCCAGAAACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GAMGCSYEQCFR*FLLGVWSQKQQ Trigger: TTGTTGTTTCTGGGACCAAACACCTAACAGAAACAACCTAAAGCATTGTTCATAGCTGCAGCCCATAGCGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTTGGTATGAAACCCCAGCTCAGTGCTCTCTTCAAACAAAATCGCACACGAGCGATTTCAGAAAGATaGTCGAAGGTCTCTCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LFGMKPQLSALFKQNRTRAISER*SKVSLN Trigger: GTTTAGAGAGACCTTCGAGCATCTTTCTGAAATCGC...TCGTGTGCGATTTTGTTTGAAGAGAGCACTGAGCTGGGGTTTCATACCAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGGGAGCCAGGTAAAATTATTCAACTCAGCAATTCTCAAACTTACATTATCACTCCATCACCAGCCTaGTGGCTTCCAGAGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VREPGKIIQLSNSQTYIITPSPA*WLPEQS Trigger: GCTCTGCTCTGGAAGCCACCAGGCTGGTGATGGAGT...GATAATGTAAGTTTGAGAATTGCTGAGTTGAATAATTTTACCTGGCTCCCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| 3UTR CAA 72 bp | TTCTCTCCAAAATGTAATGACATCCCTGCTCCAGGATaGCTTACTTCAGTGAACAATCTTCTCCCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSPKCNDIPAPG*LTSVNNLLPGQ Trigger: TTGGCCTGGGAGAAGATTGTTCACTGAAGTAAGCAATCCTGGAGCAGGGATGTCATTACATTTTGGAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGAGCTTTAAAATGTATTTTAGGTTGGCAAAGCCGCCAGATGCATATGGTCCAGCCTCTGCAGACTTaGCGATTTCAGAAAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRALKCILGWQSRQMHMVQPLQT*RFQKDA Trigger: AGCATCTTTCTGAAATCGCCAAGTCTGCAGAGGCTG...GACCATATGCATCTGGCGGCTTTGCCAACCTAAAATACATTTTAAAGCTCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| 3UTR CAA 72 bp | GTTGTAGGCACTTCATGGGCACTAGGAAACAAACTCTaGTCTGCTGGAAGAGCAACAAGCAATCTTAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVGTSWALGNKL*SAGRATSNLNC Trigger: ACAATTAAGATTGCTTGTTGCTCTTCCAGCAGACAAGAGTTTGTTTCCTAGTGCCCATGAAGTGCCTACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGGGAGCCAGGTAAAATTATTCAACTCAGCAATTCTCAAACTTACATTATCCGCATCTGCAGCCTCTaGAGACTTGGCGATTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VREPGKIIQLSNSQTYIIRICSL*RLGDFR Trigger: TCTGAAATCGCCAAGTCTGCAGAGGCTGCAGATGCG...GATAATGTAAGTTTGAGAATTGCTGAGTTGAATAATTTTACCTGGCTCCCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTTGCTGACGTTGTTGTCTGTGAATCTAAAGGGACCTTTGCTTCCATTCTGATGCTTTCCTTCCCTTaGCTTCAGTTGAACTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FVADVVVCESKGTFASILMLSFP*LQLNCL Trigger: CAAACAGTTCAACTGAAGGCAAGGGAAGGAAAGCAT...CAGAATGGAAGCAAAGGTCCCTTTAGATTCACAGACAACAACGTCAGCAACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| CDS-3UTR GCA 90 bp | GTTAGAGCTTTAAAATGTATTTTAGGTTGGCAAAGCCGCCAGATGCATATGGTCGCGATTTCAGAAAGATaGTCGAAGGTCTCTCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VRALKCILGWQSRQMHMVAISER*SKVSLN Trigger: GTTTAGAGAGACCTTCGAGCATCTTTCTGAAATCGC...GACCATATGCATCTGGCGGCTTTGCCAACCTAAAATACATTTTAAAGCTCTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| CDS-3UTR GCA 90 bp | CACTTCCCTCCTATACCTTCCACCAATCTTACCATTATGACACATACCAGAAATGCGATTTCAGAAAGATaGTCGAAGGTCTCTCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HFPPIPSTNLTIMTHTRNAISER*SKVSLN Trigger: GTTTAGAGAGACCTTCGAGCATCTTTCTGAAATCGC...ATTTCTGGTATGTGTCATAATGGTAAGATTGGTGGAAGGTATAGGAGGGAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213503.2 ENSMUST00000216830.2 |
||
| 3UTR CAA 72 bp | CGACCTTTGCTTTTCTCAGAGTTGACCAAGTCAAGTTaGTTCCTGGGTATGTCTGAAATTTGCAGATTATCA | + |
|
Preference number: 4 (lower is better) Translates to: RPLLFSELTKSS*FLGMSEICRLS Trigger: TGATAATCTGCAAATTTCAGACATACCCAGGAACAAACTTGACTTGGTCAACTCTGAGAAAAGCAAAGGTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| CDS TCA 90 bp | AGGACATACCAGGGTAAACATAAGTCAGCCCGCCCCCATCTCGGATaGAATGCTTCACCCAGGGGGCCCGTGCCTGGAGCACCTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RTYQGKHKSARPHLG*NASPRGPVPGAPGP Trigger: GGGGCCAGGTGCTCCAGGCACGGGCCCCCTGGGTGAAGCATTTCATCCGAGATGGGGGCGGGCTGACTTATGTTTACCCTGGTATGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS GCA 90 bp | CCAGCACCACATCAGCCCAGAAAGGCACTTCTTCAGCGGGGACGCTaGGGAATATCTGCCAACCAGATACCAGGTGAACACCCGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAPHQPRKALLQRGR*GISANQIPGEHPHL Trigger: CAGATGCGGGTGTTCACCTGGTATCTGGTTGGCAGATATTCCGCAGCGTCCCCGCTGAAGAAGTGCCTTTCTGGGCTGATGTGGTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019977.8 ENSMUST00000213442.2 ENSMUST00000213503.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS GCA 90 bp | CCAGCACCACATCAGCCCAGAAAGGCACTTCTTCAGCGGGGACGCTaGGGAATATCTGCCAACTGCACACGTGTGAGGAATAAGCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: PAPHQPRKALLQRGR*GISANCTRVRNKHP Trigger: GGGATGCTTATTCCTCACACGTGTGCAGTTGGCAGATATTCCGCAGCGTCCCCGCTGAAGAAGTGCCTTTCTGGGCTGATGTGGTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| CDS TCA 90 bp | TCTTCAGCGGGGACGCTGCGGAATATCTGCCAACCAGATACCAGGTaGACACCCGCATCTGCAGCCTCTGCAGACTTGGCGATTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSAGTLRNICQPDTR*TPASAASADLAISE Trigger: TTCTGAAATCGCCAAGTCTGCAGAGGCTGCAGATGCGGGTGTTCACCTGGTATCTGGTTGGCAGATATTCCGCAGCGTCCCCGCTGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019977.8 ENSMUST00000213442.2 ENSMUST00000213503.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS TCA 90 bp | TCATGGGGTCACCTACAAGTCGCCGGCTTCCCAGGCCTGAGCAATTaGCCACGATATCAAAAGATGGCTGCAGCTCCCACAGGTCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SWGHLQVAGFPGLSN*PRYQKMAAAPTGLL Trigger: TAGAAGACCTGTGGGAGCTGCAGCCATCTTTTGATATCGTGGTCAATTGCTCAGGCCTGGGAAGCCGGCGACTTGTAGGTGACCCCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS TCA 90 bp | CATCCCAGCCGCTACATTACTGGTGGTATCAGGAGTGAACCTGTCTaGGATGACAGTGACGGTGCATCCGGGAACCAGTTGGGAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: HPSRYITGGIRSEPV*DDSDGASGNQLGNA Trigger: TGCATTTCCCAACTGGTTCCCGGATGCACCGTCACTGTCATCTCAGACAGGTTCACTCCTGATACCACCAGTAATGTAGCGGCTGGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019977.8 ENSMUST00000213442.2 ENSMUST00000213503.2 ENSMUST00000213856.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS TCA 90 bp | TTCTTCAGCGGGGACGCTGCGGAATATCTGCCAACTGCACACGTGTaGGGAATAAGCATCCCAGCCGCTACATTACTGGTGGTATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FFSGDAAEYLPTAHV*GISIPAATLLVVSG Trigger: TCCTGATACCACCAGTAATGTAGCGGCTGGGATGCTTATTCCTCACACGTGTGCAGTTGGCAGATATTCCGCAGCGTCCCCGCTGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| CDS GCA 90 bp | CGGCTTCCCAGGCCTGAGCAATTGACCACGATATCAAAAGATGGCTaGAGCTCCCACAGGTCTTCTATTCTCCTGGTGAGTAGCAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: RLPRPEQLTTISKDG*SSHRSSILLVSSRP Trigger: AGGTCTGCTACTCACCAGGAGAATAGAAGACCTGTGGGAGCTGCAGCCATCTTTTGATATCGTGGTCAATTGCTCAGGCCTGGGAAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS TCA 90 bp | CTAAACCATCGCTTCTGTGTGGGTACCGGGGTATCTGCACACGTGTaGGGAATAAGCATCCCAGCCGCTACATTACTGGTGGTATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LNHRFCVGTGVSAHV*GISIPAATLLVVSG Trigger: TCCTGATACCACCAGTAATGTAGCGGCTGGGATGCTTATTCCTCACACGTGTGCAGATACCCCGGTACCCACACAGAAGCGATGGTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019977.8 ENSMUST00000213442.2 ENSMUST00000213503.2 ENSMUST00000216830.2 |
||
| CDS TCA 90 bp | TATCAAAAGATGGCTGCAGCTCCCACAGGTCTTCTATTCTCCTGGTaGGTAGCAGACCTCCACTCCCCTTTATCCTTCTCTCCAGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: YQKMAAAPTGLLFSW*VADLHSPLSFSPAT Trigger: CGTGGCTGGAGAGAAGGATAAAGGGGAGTGGAGGTCTGCTACTCACCAGGAGAATAGAAGACCTGTGGGAGCTGCAGCCATCTTTTGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS GCA 90 bp | GAAGGTCTCTCTAAACCATCGCTTCTGTGTGGGTACCGGGGTATCTaGACACGTGTGAGGAATAAGCATCCCAGCCGCTACATTACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EGLSKPSLLCGYRGI*TRVRNKHPSRYITG Trigger: ACCAGTAATGTAGCGGCTGGGATGCTTATTCCTCACACGTGTGCAGATACCCCGGTACCCACACAGAAGCGATGGTTTAGAGAGACCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019977.8 ENSMUST00000213442.2 ENSMUST00000213503.2 ENSMUST00000216830.2 |
||
| CDS TCA 90 bp | GAAGTCTCGCACTTCAGGGTTGTAAAAGCCTGGCCAAACACATACTaGGGGAACCGCTTCAGCTCAGCCTCTGTCATCTTTCGAAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: EVSHFRVVKAWPNTY*GNRFSSASVIFRNP Trigger: GGGATTTCGAAAGATGACAGAGGCTGAGCTGAAGCGGTTCCCTCAGTATGTGTTTGGCCAGGCTTTTACAACCCTGAAGTGCGAGACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019977.8 ENSMUST00000213442.2 ENSMUST00000213503.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS TCA 90 bp | GGGGTATCTGAGAGGTCATGGAGAAAAGCAAAGGCTGCACACGTGTaGGGAATAAGCATCCCAGCCGCTACATTACTGGTGGTATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVSERSWRKAKAAHV*GISIPAATLLVVSG Trigger: TCCTGATACCACCAGTAATGTAGCGGCTGGGATGCTTATTCCTCACACGTGTGCAGCCTTTGCTTTTCTCCATGACCTCTCAGATACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214102.2 |
||
| CDS TCA 90 bp | GAAGGTCTCTCTAAACCATCGCTTCTGTGTGGGTACCGGGGTATCTaGGAGGTCATGGAGAAAAGCAAAGGCTGCACACGTGTGAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: EGLSKPSLLCGYRGI*EVMEKSKGCTRVRN Trigger: ATTCCTCACACGTGTGCAGCCTTTGCTTTTCTCCATGACCTCTCAGATACCCCGGTACCCACACAGAAGCGATGGTTTAGAGAGACCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214102.2 |
||
| CDS-3UTR CAA 90 bp | GCCATCTTGGTTTCTCCTCACAGTAAGCCAATAGCCCTAGAGAAAACACAAAAACTTCAGTTGAACTGTTaGTGCCTTGGGCTTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AILVSPHSKPIALEKTQKLQLNC*CLGLPG Trigger: CCCTGGAAGCCCAAGGCACAAACAGTTCAACTGAAG...TTTTTGTGTTTTCTCTAGGGCTATTGGCTTACTGTGAGGAGAAACCAAGATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| CDS-3UTR CAA 90 bp | CCACCTAGGGAGCACTTCCCTCCTATACCTTCCACCAATCTTACCATTATGACATATGCTTTCCTTCCCTaGCCTTCAGTTGAACTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PPREHFPPIPSTNLTIMTYAFLP*PSVELF Trigger: AAACAGTTCAACTGAAGGCAAGGGAAGGAAAGCATA...TGTCATAATGGTAAGATTGGTGGAAGGTATAGGAGGGAAGTGCTCCCTAGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| CDS-3UTR CAA 90 bp | ATAGCCTTTCTCAGCTGCCTCAGTGCCCTTTTCTGGAAAACTGGTATAATAAAATTCCCTTGCCTTCAGTaGAACTGTTTGTGCCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IAFLSCLSALFWKTGIIKFPCLQ*NCLCLG Trigger: CCCAAGGCACAAACAGTTCAACTGAAGGCAAGGGAA...TTTTATTATACCAGTTTTCCAGAAAAGGGCACTGAGGCAGCTGAGAAAGGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||
| CDS GCA 72 bp | GGCAGCGTCTGTTGTCCCCGGACTAGGATCTCCTTCTaGAGCCGCACACCTGGCCTGCTGGGTCTCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GSVCCPRTRISF*SRTPGLLGLSP Trigger: GGGGCTGAGACCCAGCAGGCCAGGTGTGCGGCTGCAGAAGGAGATCCTAGTCCGGGGACAACAGACGCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS CCA 72 bp | AGCTTCCGGTCCTTTGGACCCTCCACGGAGGGTGTATaGGCGTGGCCCAGGGGTTCTGTAGGCAGGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFRSFGPSTEGV*AWPRGSVGRQA Trigger: GGCCTGCCTGCCTACAGAACCCCTGGGCCACGCCCATACACCCTCCGTGGAGGGTCCAAAGGACCGGAAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213442.2 |
||
| CDS CCA 72 bp | GTGCCTGGAGCACCTGGCCCCTTACCGGGGAAATCATaGGGTCACCTACAAGTCGCCGGCTTCCCAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VPGAPGPLPGKS*GHLQVAGFPGL Trigger: CAGGCCTGGGAAGCCGGCGACTTGTAGGTGACCCCATGATTTCCCCGGTAAGGGGCCAGGTGCTCCAGGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS TCA 72 bp | CAGGGTAAACATAAGTCAGCCCGCCCCCATCTCGGATaGAATGCTTCACCCAGGGGGCCCGTGCCTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QGKHKSARPHLG*NASPRGPVPGA Trigger: TGCTCCAGGCACGGGCCCCCTGGGTGAAGCATTTCATCCGAGATGGGGGCGGGCTGACTTATGTTTACCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS GCA 72 bp | GGACTAGGATCTCCTTCTGCAGCCGCACACCTGGCCTaGTGGGTCTCAGCCCCACTTTCTCTTTTATGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GLGSPSAAAHLA*WVSAPLSLLCR Trigger: ACGACATAAAAGAGAAAGTGGGGCTGAGACCCAGCAGGCCAGGTGTGCGGCTGCAGAAGGAGATCCTAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS GCA 72 bp | CTTCTTCAGCGGGGACGCTGCGGAATATCTGCCAACTaGACACGTGTGAGGAATAAGCATCCCAGCCGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LLQRGRCGISAN*TRVRNKHPSRY Trigger: GTAGCGGCTGGGATGCTTATTCCTCACACGTGTGCAGTTGGCAGATATTCCGCAGCGTCCCCGCTGAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| CDS CCA 72 bp | CTAGGATCTCCTTCTGCAGCCGCACACCTGGCCTGCTaGGTCTCAGCCCCACTTTCTCTTTTATGTCGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGSPSAAAHLAC*VSAPLSLLCRR Trigger: CCTACGACATAAAAGAGAAAGTGGGGCTGAGACCCAGCAGGCCAGGTGTGCGGCTGCAGAAGGAGATCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS TCA 72 bp | CGCTTCTGTGTGGGTACCGGGGTATCTGCACACGTGTaGGGAATAAGCATCCCAGCCGCTACATTACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RFCVGTGVSAHV*GISIPAATLLV Trigger: CACCAGTAATGTAGCGGCTGGGATGCTTATTCCTCACACGTGTGCAGATACCCCGGTACCCACACAGAAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019977.8 ENSMUST00000213442.2 ENSMUST00000213503.2 ENSMUST00000216830.2 |
||
| CDS TCA 72 bp | CATGGGGTCACCTACAAGTCGCCGGCTTCCCAGGCCTaGGCAATTGACCACGATATCAAAAGATGGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HGVTYKSPASQA*AIDHDIKRWLQ Trigger: CTGCAGCCATCTTTTGATATCGTGGTCAATTGCTCAGGCCTGGGAAGCCGGCGACTTGTAGGTGACCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS TCA 72 bp | GGGGACGCTGCGGAATATCTGCCAACTGCACACGTGTaGGGAATAAGCATCCCAGCCGCTACATTACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GDAAEYLPTAHV*GISIPAATLLV Trigger: CACCAGTAATGTAGCGGCTGGGATGCTTATTCCTCACACGTGTGCAGTTGGCAGATATTCCGCAGCGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| CDS GCA 72 bp | CATCAGCCCAGAAAGGCACTTCTTCAGCGGGGACGCTaGGGAATATCTGCCAACCAGATACCAGGTGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: HQPRKALLQRGR*GISANQIPGEH Trigger: GTGTTCACCTGGTATCTGGTTGGCAGATATTCCGCAGCGTCCCCGCTGAAGAAGTGCCTTTCTGGGCTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019977.8 ENSMUST00000213442.2 ENSMUST00000213503.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS GCA 72 bp | CATCAGCCCAGAAAGGCACTTCTTCAGCGGGGACGCTaGGGAATATCTGCCAACTGCACACGTGTGAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: HQPRKALLQRGR*GISANCTRVRN Trigger: ATTCCTCACACGTGTGCAGTTGGCAGATATTCCGCAGCGTCCCCGCTGAAGAAGTGCCTTTCTGGGCTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213856.2 |
||
| CDS CCA 72 bp | TACAGCTTCGACAAGGAAGCAGGGGTCCTGAGGGTATaGATACACTCCATCACCAGCCTGGTGGCTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: YSFDKEAGVLRV*IHSITSLVASR Trigger: TCTGGAAGCCACCAGGCTGGTGATGGAGTGTATCCATACCCTCAGGACCCCTGCTTCCTTGTCGAAGCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS CAA 90 bp | ATCATGGGGTCACCTACAAGTCGCCGGCTTCCCAGGCCTGAGCAATaGACCACGATATCAAAAGATGGCTGCAGCTCCCACAGGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: IMGSPTSRRLPRPEQ*TTISKDGCSSHRSS Trigger: AGAAGACCTGTGGGAGCTGCAGCCATCTTTTGATATCGTGGTCAATTGCTCAGGCCTGGGAAGCCGGCGACTTGTAGGTGACCCCATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS CCA 72 bp | TCTGAGATGACAGTGACGGTGCATCCGGGAACCAGTTaGGAAATGCATGCTGCAGTAGACAGCCCTATCACG | + |
|
Preference number: 6 (lower is better) Translates to: SEMTVTVHPGTS*EMHAAVDSPIT Trigger: CGTGATAGGGCTGTCTACTGCAGCATGCATTTCCCAACTGGTTCCCGGATGCACCGTCACTGTCATCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019977.8 ENSMUST00000213442.2 ENSMUST00000213503.2 ENSMUST00000213856.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS TCA 72 bp | CGCTACATTACTGGTGGTATCAGGAGTGAACCTGTCTaGGATGACAGTGACGGTGCATCCGGGAACCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RYITGGIRSEPV*DDSDGASGNQL Trigger: CAACTGGTTCCCGGATGCACCGTCACTGTCATCTCAGACAGGTTCACTCCTGATACCACCAGTAATGTAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019977.8 ENSMUST00000213442.2 ENSMUST00000213503.2 ENSMUST00000213856.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS GCA 72 bp | ACCAGATACCAGGTGAACACCCGCATCTGCAGCCTCTaGAGACTTGGCGATTTCAGAAAGATGCTCGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TRYQVNTRICSL*RLGDFRKMLEG Trigger: ACCTTCGAGCATCTTTCTGAAATCGCCAAGTCTGCAGAGGCTGCAGATGCGGGTGTTCACCTGGTATCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019977.8 ENSMUST00000213442.2 ENSMUST00000213503.2 ENSMUST00000214102.2 ENSMUST00000216830.2 |
||
| CDS TCA 72 bp | GAGAGGTCATGGAGAAAAGCAAAGGCTGCACACGTGTaGGGAATAAGCATCCCAGCCGCTACATTACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ERSWRKAKAAHV*GISIPAATLLV Trigger: CACCAGTAATGTAGCGGCTGGGATGCTTATTCCTCACACGTGTGCAGCCTTTGCTTTTCTCCATGACCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214102.2 |
||
| CDS GCA 72 bp | AGGCCTGAGCAATTGACCACGATATCAAAAGATGGCTaGAGCTCCCACAGGTCTTCTATTCTCCTGGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RPEQLTTISKDG*SSHRSSILLVS Trigger: ACTCACCAGGAGAATAGAAGACCTGTGGGAGCTGCAGCCATCTTTTGATATCGTGGTCAATTGCTCAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019977.8 |
||
| CDS GCA 72 bp | ATGCTTTCCTTCCCTTGCCTTCAGTTGAACTGTTTGTaGCTTGGGCTTCCAGGGTCTCAAATGACCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MLSFPCLQLNCL*LGLPGSQMTFS Trigger: AGAGAAGGTCATTTGAGACCCTGGAAGCCCAAGGCACAAACAGTTCAACTGAAGGCAAGGGAAGGAAAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213503.2 |
||